View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6109_low_3 (Length: 473)
Name: NF6109_low_3
Description: NF6109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6109_low_3 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 428; Significance: 0; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 1 - 457
Target Start/End: Original strand, 5482588 - 5483044
Alignment:
| Q |
1 |
cgatatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctcatcaatcagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5482588 |
cgatatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctcatcaatcact |
5482687 |
T |
|
| Q |
101 |
tataaagtggattttgattgattgatttattttgtgtgtaggtatgtgtggagttcactttaaactattttcatcatatgaattagttttcattttgaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5482688 |
tataaagtggattttgattgattgatttattttgtgtgtaggtatgtgtggagttcactttaaactattttcatcatatgaattagttttcattttgaat |
5482787 |
T |
|
| Q |
201 |
ttcctcccatacatgattcattgagacnnnnnnngggatatatggaaagcaactaaaataaatacagtgtatcacaagatagagaaacatatacacttca |
300 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5482788 |
ttcctcccatacatgattcattgagacaaaaaaagggatatatggaaagcaactaaaataaatacagtgtatcacaagatagagaaacatatacacttca |
5482887 |
T |
|
| Q |
301 |
aaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatctcaagtacaacgactccaaagctaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5482888 |
aaacttacatggccaagaaggtttaaatgatgtcgagggtcacaaaatccgcgattctttctaccgctaattatctcaagtacaacgactccaaagctaa |
5482987 |
T |
|
| Q |
401 |
aaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5482988 |
aaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
5483044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 7 - 457
Target Start/End: Original strand, 5488022 - 5488471
Alignment:
| Q |
7 |
gtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctcatcaatcagttataaa |
106 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| || | ||||| |
|
|
| T |
5488022 |
gtcagctattaactccagtggtctttcttcaatccatagtttccatgcctaaaatgacatcaaagttacaacatgagtaagctcaacact----tataat |
5488117 |
T |
|
| Q |
107 |
gtggattttgattgattgatttattttgtgtgtaggtatgtgtggagttcactttaaactattttcatcatatgaattagttttcattttgaatttcctc |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| || | |||||||||||||||||||||||||||| |||| || |
|
|
| T |
5488118 |
gtggattttgattgattgatttattttgtgtgttggtaagtgtggagttcattttaaattagtatcatcatatgaattagttttcattttgagtttcttc |
5488217 |
T |
|
| Q |
207 |
ccatacat--gattcattgagacnnnnnnn-gggatatatggaaagcaactaaaataaatacagtgtatcacaagatagagaaacatatacacttcaaaa |
303 |
Q |
| |
|
|||| || |||| |||||||| |||||||||||||||||||||||| | | | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5488218 |
ccatgcagtagatttattgagacccaaaaaagggatatatggaaagcaactaaaaaataaatagtgtgtcacaagatagagaaacatatacacttcaaaa |
5488317 |
T |
|
| Q |
304 |
cttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatctcaagtacaacgactccaaagctaaaaa |
403 |
Q |
| |
|
|||||||| ||||||||||| | | |||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
5488318 |
cttacatgaccaagaaggttaagacgatgtagagggtcacgaaatccatgattctttctaccgctaattatctcaagtagaacaactccaaagctgaaaa |
5488417 |
T |
|
| Q |
404 |
catcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
||||||||||||||||||| || |||| | |||||||||||||||||||||||| |
|
|
| T |
5488418 |
catcagattttattgagaaggatccatccgctgcatattctggaggcatatatc |
5488471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 7 - 457
Target Start/End: Original strand, 5500839 - 5501286
Alignment:
| Q |
7 |
gtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctcatcaatcagttataaa |
106 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || | ||||| |
|
|
| T |
5500839 |
gtcagctattaactccagtggtctttcttcaatccatagtctccatgcctaaaatgacatcaaagttacaacatgagtaagctcaacact----tataat |
5500934 |
T |
|
| Q |
107 |
gtggattttgattgattgatttattttgtgtgtaggtatgtgtggagttcactttaaactattttcatcatatgaattagttttcattttgaatttcctc |
206 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | || |
|
|
| T |
5500935 |
gtggattttgattgattgatttatt--gtgtgttagtatgtgtggagttcactttaaactatcatcatcatataaattagttttcattttgaattccttc |
5501032 |
T |
|
| Q |
207 |
ccat--acatgattcattgaga-cnnnnnnngggatatatggaaagcaactaaaataaatacagtgtatcacaagatagagaaacatatacacttcaaaa |
303 |
Q |
| |
|
|||| | | |||| ||||||| | |||||||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
5501033 |
ccatgcagaagatttattgagaccaaaaaaagggatataagaaaagcaactaaaaaggatacagtgtgtcacaagatagagaaacatatacacttccaaa |
5501132 |
T |
|
| Q |
304 |
cttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatctcaagtacaacgactccaaagctaaaaa |
403 |
Q |
| |
|
|||||||| ||||||||||| | | | || | ||||| | |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||| ||| |
|
|
| T |
5501133 |
cttacatgaccaagaaggttaagacggtgtagtgggtcgcgaaatccatgattctttctaccgctaattatctcaagtagaacaactccaaaactataaa |
5501232 |
T |
|
| Q |
404 |
catcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
||||||||||||||||||| || |||| | |||||||||||||||||||||||| |
|
|
| T |
5501233 |
catcagattttattgagaaggatccatccgctgcatattctggaggcatatatc |
5501286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 3 - 457
Target Start/End: Original strand, 5523703 - 5524158
Alignment:
| Q |
3 |
atatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctcatcaatcagtta |
102 |
Q |
| |
|
||||||| |||||||||||||||| ||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||| ||||| || || || |
|
|
| T |
5523703 |
atatgtctgctattaactccagtggtctttcttcaatccatagtttccatgccttaaatgacatcaaagttacaacatgagtaagct----aaacacata |
5523798 |
T |
|
| Q |
103 |
taaagtggattttgattgattgatttattttgtgtgtaggtatgtgtggagttcactttaaactattttcatcatatgaattagttttcattttgaattt |
202 |
Q |
| |
|
||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| |
|
|
| T |
5523799 |
taatgtgaattttgattgattggtttattttgtgtgctggtatgtgtggagttcactttaaacaattatcatggtatgaattagttttcattttgaattt |
5523898 |
T |
|
| Q |
203 |
cctcccatacatga--ttcattgagacnnnnnnnggga-tatatggaaagcaactaaaa--taaatacagtgtatcacaagatagagaaacatatacact |
297 |
Q |
| |
|
| || ||| || | || |||||||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |
|
|
| T |
5523899 |
cttcacatgcagaacatttattgagactaaaaaaaggaatatatggaaagcaactaaaaaataaatacaatgtggtggaagatagagaaacatatacatg |
5523998 |
T |
|
| Q |
298 |
tcaaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatctcaagtacaacgactccaaagc |
397 |
Q |
| |
|
|||||||||||||| ||||||||||| | | |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5523999 |
tcaaaacttacatgaccaagaaggttaagacgatgtagagggtcacgaaatccatgattctttctaccgctaattatctcaagtacaacgactccaaagc |
5524098 |
T |
|
| Q |
398 |
taaaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |
|
|
| T |
5524099 |
taaaaacatcagattttattgagaaagatccatgcgctgcatattctggaggcatgtatc |
5524158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 276 - 457
Target Start/End: Original strand, 5452996 - 5453177
Alignment:
| Q |
276 |
aagatagagaaacatatacacttcaaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatc |
375 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5452996 |
aagatagaaaaacatataaacttcaaaacttacatgaccaagaaggtttcgatgatgcagagggtcacaaaatccgcgattcttcctaccgctaattatc |
5453095 |
T |
|
| Q |
376 |
tcaagtacaacgactccaaagctaaaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5453096 |
tcaagtacaacgactccaaaactaaaaacatcagattttattgagaaagacccatgcaccgcatattctggaggcatatatc |
5453177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 272 - 457
Target Start/End: Complemental strand, 5856033 - 5855848
Alignment:
| Q |
272 |
tcacaagatagagaaacatatacacttcaaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaat |
371 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||| |||||||||||||||||| |||||| ||||||| || |
|
|
| T |
5856033 |
tcacaagatagagaaacatatacactccaaaacttacatgcccaagaaggtttagacgatgttgagggtcacaaaatccgctattcttcttaccgctgat |
5855934 |
T |
|
| Q |
372 |
tatctcaagtacaacgactccaaagctaaaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5855933 |
tatctcaagtacaacgactccgaagctaaaaacatcagattttattgagaaagatccatgcactgcatattctggaggcatatatc |
5855848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 268 - 457
Target Start/End: Complemental strand, 5804312 - 5804123
Alignment:
| Q |
268 |
tgtatcacaagatagagaaacatatacacttcaaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgc |
367 |
Q |
| |
|
||||| |||||||||| || ||||| ||||||||||||||||| ||||||||||||| ||||||| |||| ||| |||||||||||||||| ||||||| |
|
|
| T |
5804312 |
tgtatgacaagatagaagaatatataaacttcaaaacttacatgaccaagaaggtttagatgatgctgaggatcagaaaatccgcgattcttcctaccgc |
5804213 |
T |
|
| Q |
368 |
taattatctcaagtacaacgactccaaagctaaaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5804212 |
taattatctcaagtacaacgactccgaagctaaaaacatcagattttatagagaaagatccatgcactgcatattctggaggcatatatc |
5804123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 276 - 457
Target Start/End: Original strand, 5444472 - 5444653
Alignment:
| Q |
276 |
aagatagagaaacatatacacttcaaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatc |
375 |
Q |
| |
|
|||||| | ||| ||||| ||||||||||||||||| ||||||||||||| | |||| ||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
5444472 |
aagataaaaaaagatataaacttcaaaacttacatgaccaagaaggtttagacgatgaagagggtcacgaaatccgcgattcttcctaccgctaattatc |
5444571 |
T |
|
| Q |
376 |
tcaagtacaacgactccaaagctaaaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5444572 |
tcaagtacaacgactccaaaactaaaaacatcagattttattgagaaagacccatgcaccgcatattctggaggcatatatc |
5444653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 275 - 457
Target Start/End: Complemental strand, 5850841 - 5850659
Alignment:
| Q |
275 |
caagatagagaaacatatacacttcaaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattat |
374 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||| ||||||||||||| || ||| |||||||| ||||||| |||||||| |||||||||||||| |
|
|
| T |
5850841 |
caagatagaggaacatatacacttcataacttacatgaccaagaaggtttagattgtgcagagggtcagaaaatccacgattcttcctaccgctaattat |
5850742 |
T |
|
| Q |
375 |
ctcaagtacaacgactccaaagctaaaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
5850741 |
ctcaagtacgacgactccgaaactaaaaacatcagactttattgagaaagatccatgcacggcatattctggaggcatatatc |
5850659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 286 - 457
Target Start/End: Original strand, 20341797 - 20341968
Alignment:
| Q |
286 |
aacatatacacttcaaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatctcaagtacaa |
385 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||| || ||||||||||| ||||| |||| |
|
|
| T |
20341797 |
aacaaatacacttcaaaacttacataaccaaggaggtttagatgatgtagagggtcacaaaatccgcgattcttcctgccgctaattatttcaagcacaa |
20341896 |
T |
|
| Q |
386 |
cgactccaaagctaaaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||||||| |||| |
|
|
| T |
20341897 |
cgactccaaaactaaaaacatcagattttattgagaatgatccatgcacagcatattctggaggcatgtatc |
20341968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 300 - 457
Target Start/End: Complemental strand, 5830036 - 5829879
Alignment:
| Q |
300 |
aaaacttacatggccaagaaggtttaaatgatgccgagggtcacaaaatccgcgattctttctaccgctaattatctcaagtacaacgactccaaagcta |
399 |
Q |
| |
|
|||||||||||||||||||||||||| || ||| |||| ||||||||||| |||||||| | |||||||| |||||||||||||| |||||||||||| |
|
|
| T |
5830036 |
aaaacttacatggccaagaaggtttagattatgttgaggatcacaaaatccacgattcttcgtgccgctaatgatctcaagtacaacaactccaaagcta |
5829937 |
T |
|
| Q |
400 |
aaaacatcagattttattgagaaagacccatgcactgcatattctggaggcatatatc |
457 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
5829936 |
aaaacatcagattttattgagaaaaacccatgcactgcatactctggaggcatatatc |
5829879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 20341621 - 20341760
Alignment:
| Q |
2 |
gatatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctcatcaatcagtt |
101 |
Q |
| |
|
||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| || | | |
|
|
| T |
20341621 |
gatatgtcagctattaactcctttgccctttcttcaatccatagtctccatgcctaaaatgacatcaaggttacaaaaagagtaagctcaacatt----t |
20341716 |
T |
|
| Q |
102 |
ataaagtggattttgattgattgatttattttgtgtgtaggtat |
145 |
Q |
| |
|
|| |||||||||||||||||||| ||||||| |||||| |||| |
|
|
| T |
20341717 |
atgaagtggattttgattgattggtttatttcttgtgtatgtat |
20341760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 5452748 - 5452941
Alignment:
| Q |
5 |
atgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctcatcaatcagttata |
104 |
Q |
| |
|
|||||||||||||||||| || ||| ||||||||||| |||||||||||||||||||||||||| |||||| |||| |||| |||||| |||| |
|
|
| T |
5452748 |
atgtcagctattaactcctctggcctgccttcaatccacagtctccatgcctaaaatgacatcaaggttacagacagagtaagc---tcaatc--ctata |
5452842 |
T |
|
| Q |
105 |
aagtggattttgattgattgatttattttgtgtgtaggtatgtgtggagttcactttaaactatt-ttcatcatatgaattagttttcattttgaattt |
202 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||| || |||| ||||| |||||||| | | ||| |||||||||| |
|
|
| T |
5452843 |
aagtggattttggttgattgatttatttttagtgtatgtatgtgtggagtctactttcaattattattcatgatatgaataaatattccttttgaattt |
5452941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 5856148 - 5856077
Alignment:
| Q |
3 |
atatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagtta |
74 |
Q |
| |
|
||||||| ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5856148 |
atatgtctgctattaactctagtggtctttcttcaatccatagtctccatgcctaaaatgacatcaaagtta |
5856077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5830296 - 5830221
Alignment:
| Q |
1 |
cgatatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttaca |
76 |
Q |
| |
|
||||||||||||||| |||||||||| |||| |||||||||||| || ||||||||||| |||||||||||||| |
|
|
| T |
5830296 |
cgatatgtcagctatgaactccagtgacctttcttcaatccataatcgccatgcctaaagaaacatcaaagttaca |
5830221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 5804517 - 5804461
Alignment:
| Q |
35 |
tcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctca |
91 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| |
|
|
| T |
5804517 |
tcaatccatagtctccatgcctaaaatgacatcaaagttatagtaagagtaagctca |
5804461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 5851112 - 5851024
Alignment:
| Q |
3 |
atatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttacaacaagagaaagctca |
91 |
Q |
| |
|
|||||| |||||| ||||| |||| |||| |||| ||||||||||||||||||| ||||||||| ||| ||||| ||||| ||||||| |
|
|
| T |
5851112 |
atatgttagctatgaactctagtggcctttcttcgatccatagtctccatgcctgaaatgacataaaatttacatcaagaataagctca |
5851024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 5444350 - 5444422
Alignment:
| Q |
3 |
atatgtcagctattaactccagtgtccttccttcaatccatagtctccatgcctaaaatgacatcaaagttac |
75 |
Q |
| |
|
|||||||||| ||||||||| || ||| ||||||||||| | | |||||||||||||||||||||| ||||| |
|
|
| T |
5444350 |
atatgtcagccattaactcctctggcctgccttcaatccacaatttccatgcctaaaatgacatcaaggttac |
5444422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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