View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6109_low_7 (Length: 261)
Name: NF6109_low_7
Description: NF6109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6109_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 6262664 - 6262843
Alignment:
| Q |
69 |
tgcaccatctcatctatctatggtgtaaaaatcctttcactctatccatgcctgatccattaaattgagcttaatatcttctatgcaatcactagattcc |
168 |
Q |
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| T |
6262664 |
tgcaccatctcatctatctatggtgtaaaaatcctttcactctatccatgcctgatccattaaattgagctgaatatcttctatgcaatcactagattcc |
6262763 |
T |
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| Q |
169 |
atatcggtttccaattctggcacttcatcaaatgtttttaattttggaaccaacttctcaattggacaagcactgtcttc |
248 |
Q |
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| T |
6262764 |
atatcggtttccaattctggcacttcatcaaatgtttttaattttggaaccaacttctcaattggacaagcactgtcttc |
6262843 |
T |
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