View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6112_low_3 (Length: 493)

Name: NF6112_low_3
Description: NF6112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6112_low_3
NF6112_low_3
[»] chr8 (25 HSPs)
chr8 (24-349)||(9928320-9928648)
chr8 (343-478)||(9928143-9928278)
chr8 (393-435)||(32506987-32507029)
chr8 (393-439)||(11188253-11188299)
chr8 (393-439)||(43812456-43812502)
chr8 (393-434)||(1561210-1561251)
chr8 (393-434)||(3945205-3945246)
chr8 (393-434)||(40728516-40728557)
chr8 (393-433)||(4558730-4558770)
chr8 (393-429)||(10939343-10939379)
chr8 (388-434)||(10114421-10114467)
chr8 (397-434)||(1433476-1433513)
chr8 (393-434)||(4763849-4763890)
chr8 (397-430)||(10062229-10062262)
chr8 (393-434)||(14482133-14482174)
chr8 (393-434)||(26056016-26056057)
chr8 (393-426)||(26215435-26215468)
chr8 (393-422)||(26820142-26820171)
chr8 (393-426)||(29699193-29699226)
chr8 (392-421)||(33522430-33522459)
chr8 (393-434)||(38561657-38561698)
chr8 (393-434)||(38874577-38874618)
chr8 (393-426)||(42597340-42597373)
chr8 (388-432)||(1112786-1112830)
chr8 (393-425)||(31884534-31884566)
[»] chr4 (27 HSPs)
chr4 (350-433)||(51044514-51044597)
chr4 (361-432)||(21043280-21043351)
chr4 (393-434)||(4191670-4191711)
chr4 (393-434)||(24936241-24936282)
chr4 (393-434)||(28623220-28623261)
chr4 (393-434)||(42641731-42641772)
chr4 (393-434)||(47970249-47970290)
chr4 (396-427)||(3176223-3176254)
chr4 (395-426)||(19422357-19422388)
chr4 (394-433)||(21683578-21683617)
chr4 (393-436)||(21952504-21952547)
chr4 (393-428)||(44119260-44119295)
chr4 (393-428)||(52645847-52645882)
chr4 (400-434)||(4663801-4663835)
chr4 (393-426)||(6364088-6364121)
chr4 (393-434)||(11389457-11389498)
chr4 (393-434)||(20907104-20907145)
chr4 (405-434)||(27321941-27321970)
chr4 (393-426)||(30024639-30024672)
chr4 (393-430)||(35743239-35743276)
chr4 (389-434)||(36048731-36048775)
chr4 (393-426)||(44249225-44249258)
chr4 (393-434)||(46176104-46176145)
chr4 (393-433)||(4798657-4798697)
chr4 (400-432)||(23819023-23819055)
chr4 (350-390)||(29601042-29601082)
chr4 (393-425)||(49803151-49803183)
[»] chr5 (26 HSPs)
chr5 (393-437)||(38033896-38033940)
chr5 (393-434)||(35135760-35135801)
chr5 (392-426)||(18704132-18704166)
chr5 (393-434)||(40048378-40048419)
chr5 (389-433)||(31208405-31208449)
chr5 (393-432)||(7096225-7096264)
chr5 (391-426)||(8089242-8089277)
chr5 (393-432)||(13224362-13224401)
chr5 (388-431)||(34117626-34117669)
chr5 (405-435)||(10907309-10907339)
chr5 (388-426)||(12460093-12460131)
chr5 (397-435)||(33459037-33459075)
chr5 (393-426)||(1773523-1773556)
chr5 (393-426)||(12407759-12407792)
chr5 (393-434)||(14714937-14714978)
chr5 (393-434)||(20982233-20982274)
chr5 (393-434)||(26516229-26516270)
chr5 (393-434)||(27106021-27106062)
chr5 (393-426)||(29117028-29117061)
chr5 (393-434)||(29588811-29588852)
chr5 (393-434)||(40097501-40097542)
chr5 (393-434)||(40499773-40499814)
chr5 (394-434)||(4991042-4991082)
chr5 (393-433)||(9927517-9927557)
chr5 (393-433)||(13508464-13508504)
chr5 (393-433)||(21782667-21782707)
[»] chr3 (31 HSPs)
chr3 (350-433)||(12985379-12985459)
chr3 (396-433)||(24605117-24605154)
chr3 (388-434)||(20173981-20174027)
chr3 (393-434)||(2128349-2128390)
chr3 (393-434)||(16790186-16790227)
chr3 (392-429)||(32663578-32663615)
chr3 (393-424)||(36887463-36887494)
chr3 (393-432)||(37788794-37788832)
chr3 (393-432)||(43116526-43116565)
chr3 (400-434)||(24158607-24158641)
chr3 (392-434)||(28283674-28283716)
chr3 (393-434)||(2070986-2071027)
chr3 (393-434)||(2304339-2304380)
chr3 (393-434)||(8142808-8142849)
chr3 (394-423)||(24235782-24235811)
chr3 (393-434)||(38462212-38462253)
chr3 (393-434)||(39743836-39743877)
chr3 (393-434)||(39971250-39971291)
chr3 (397-434)||(41028953-41028990)
chr3 (393-434)||(41159040-41159081)
chr3 (393-434)||(42084349-42084390)
chr3 (393-426)||(48364977-48365010)
chr3 (388-433)||(48597682-48597727)
chr3 (393-425)||(1395611-1395643)
chr3 (405-433)||(1809945-1809973)
chr3 (393-433)||(2153614-2153654)
chr3 (393-433)||(3182460-3182500)
chr3 (393-433)||(20192704-20192744)
chr3 (394-426)||(23815992-23816024)
chr3 (393-429)||(30669068-30669104)
chr3 (393-421)||(32095289-32095317)
[»] chr7 (29 HSPs)
chr7 (389-436)||(2894746-2894793)
chr7 (393-434)||(2223079-2223120)
chr7 (389-434)||(46223166-46223211)
chr7 (393-432)||(35809002-35809041)
chr7 (396-434)||(25507282-25507320)
chr7 (396-434)||(25558290-25558328)
chr7 (396-434)||(25558488-25558526)
chr7 (393-426)||(1432065-1432098)
chr7 (393-434)||(4591473-4591514)
chr7 (393-434)||(27481392-27481433)
chr7 (388-433)||(33894555-33894600)
chr7 (393-434)||(44241791-44241832)
chr7 (393-433)||(28165023-28165063)
chr7 (399-434)||(5939015-5939050)
chr7 (363-434)||(6552339-6552409)
chr7 (393-427)||(28702698-28702732)
chr7 (393-426)||(2013138-2013171)
chr7 (393-434)||(3610838-3610879)
chr7 (393-434)||(7244633-7244674)
chr7 (393-434)||(21853214-21853255)
chr7 (393-434)||(24973875-24973916)
chr7 (393-434)||(30133980-30134021)
chr7 (393-434)||(30496635-30496676)
chr7 (393-434)||(49060471-49060512)
chr7 (393-433)||(5373157-5373197)
chr7 (393-437)||(10079438-10079482)
chr7 (393-433)||(22388002-22388042)
chr7 (396-432)||(38713128-38713164)
chr7 (393-421)||(39591565-39591593)
[»] chr2 (28 HSPs)
chr2 (393-435)||(10143102-10143144)
chr2 (393-434)||(10150686-10150727)
chr2 (389-434)||(15171181-15171226)
chr2 (393-433)||(38239649-38239689)
chr2 (393-434)||(13864581-13864622)
chr2 (393-434)||(43431542-43431583)
chr2 (393-433)||(5045255-5045295)
chr2 (396-432)||(15173459-15173495)
chr2 (393-433)||(41033048-41033088)
chr2 (389-424)||(40837522-40837557)
chr2 (397-431)||(9875559-9875593)
chr2 (393-434)||(3611157-3611198)
chr2 (393-434)||(3673738-3673779)
chr2 (393-426)||(5133711-5133744)
chr2 (393-434)||(7825183-7825224)
chr2 (393-434)||(9478230-9478271)
chr2 (393-434)||(11344382-11344423)
chr2 (393-426)||(24141747-24141780)
chr2 (393-434)||(25609727-25609768)
chr2 (393-434)||(28803604-28803645)
chr2 (393-434)||(31461369-31461410)
chr2 (393-434)||(34054999-34055040)
chr2 (393-434)||(44606186-44606227)
chr2 (393-421)||(1939430-1939458)
chr2 (393-433)||(2416245-2416285)
chr2 (392-428)||(29430693-29430729)
chr2 (393-433)||(40672894-40672934)
chr2 (393-425)||(41022176-41022208)
[»] chr6 (21 HSPs)
chr6 (393-430)||(5554863-5554900)
chr6 (393-434)||(24836297-24836338)
chr6 (393-434)||(33116536-33116577)
chr6 (393-437)||(33068659-33068703)
chr6 (393-427)||(34544548-34544582)
chr6 (393-434)||(31461609-31461650)
chr6 (393-434)||(32975909-32975950)
chr6 (393-433)||(4247732-4247772)
chr6 (393-429)||(33500579-33500615)
chr6 (391-434)||(33259747-33259790)
chr6 (393-431)||(507154-507192)
chr6 (404-434)||(2548316-2548346)
chr6 (392-426)||(10836760-10836794)
chr6 (393-423)||(31672012-31672042)
chr6 (393-434)||(2023727-2023768)
chr6 (394-431)||(6647323-6647360)
chr6 (393-426)||(9559639-9559672)
chr6 (393-434)||(31668783-31668824)
chr6 (393-434)||(32843413-32843454)
chr6 (393-433)||(2514634-2514674)
chr6 (399-431)||(32513759-32513791)
[»] chr1 (28 HSPs)
chr1 (393-433)||(27140417-27140457)
chr1 (393-437)||(37818392-37818436)
chr1 (393-432)||(15360827-15360866)
chr1 (393-434)||(4202227-4202268)
chr1 (393-434)||(13037795-13037836)
chr1 (393-434)||(16982034-16982075)
chr1 (393-434)||(37593767-37593808)
chr1 (393-433)||(4200161-4200201)
chr1 (393-429)||(49517006-49517042)
chr1 (395-434)||(26679205-26679244)
chr1 (390-433)||(45327539-45327582)
chr1 (398-432)||(24146362-24146396)
chr1 (393-423)||(49557083-49557113)
chr1 (350-426)||(50319231-50319306)
chr1 (393-434)||(6981423-6981464)
chr1 (401-434)||(20713587-20713620)
chr1 (393-426)||(23895275-23895308)
chr1 (389-426)||(29007810-29007847)
chr1 (393-434)||(29046011-29046052)
chr1 (393-430)||(33339518-33339555)
chr1 (393-426)||(36641814-36641847)
chr1 (393-434)||(45769841-45769882)
chr1 (394-426)||(172676-172708)
chr1 (394-426)||(6976887-6976919)
chr1 (398-434)||(17269181-17269217)
chr1 (393-433)||(38651507-38651547)
chr1 (394-434)||(45999387-45999427)
chr1 (393-429)||(48830174-48830210)
[»] scaffold0590 (1 HSPs)
scaffold0590 (393-434)||(1172-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (393-434)||(2762-2803)
[»] scaffold0100 (1 HSPs)
scaffold0100 (393-434)||(42548-42589)
[»] scaffold0024 (1 HSPs)
scaffold0024 (393-433)||(27508-27548)
[»] scaffold0508 (1 HSPs)
scaffold0508 (393-426)||(9873-9906)
[»] scaffold0019 (1 HSPs)
scaffold0019 (393-426)||(104232-104265)


Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 24 - 349
Target Start/End: Complemental strand, 9928648 - 9928320
Alignment:
Q  24 tcacataagtttacttcaaagagctatctatc----aacaaatttctgnnnnnnnnggttataaagaatgggttgcagtagctcaaaggtagcagaaaat 119  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  9928648 tcacataagtttacttcaaagagctatctatctatcaacaaatttctgttttttt-ggttataaagaatgggttgcagtagctcaaaggtagcagaaaat 9928550  T
Q  120 attatggatggatcctcagaagttggcaaagataagaatctaccttcacaagtaaaagaaaatgagcttaattcttgttctgaagatttttctatccttg 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9928549 attatggatggatcctcagaagttggcaaagataagaatttaccttcacaagtaaaagaaaatgagcttatttcttgttctgaagatttttctatccttg 9928450  T
Q  220 cttctgaaacaccatgtaagtaaagaaagcttccttttcatgnnnnnnngttgccttggaaatttaatttgttttgatcaatcaattgtaatcttataat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9928449 cttctgaaacaccatgtaagtaaagaaagcttccttttcatgtttttttgttgccttggaaatttaatttgttttgatcaatgaattgtaatcttataat 9928350  T
Q  320 ctgtaaaattataggtagatgtgtgattta 349  Q
    ||||||||||||||||||||||||||||||    
T  9928349 ctgtaaaattataggtagatgtgtgattta 9928320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 343 - 478
Target Start/End: Complemental strand, 9928278 - 9928143
Alignment:
Q  343 tgatttaataagttctataggatagcttatgaaaacagattatggcttaatttatcttttgttatagaaataacttatacataaacacttatttgctgct 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928278 tgatttaataagttctataggatagcttatgaaaacagattatggcttaatttatcttttgttatagaaataacttatacataaacacttatttgctgct 9928179  T
Q  443 acaaacatggttcctttcatttttgcaaccaattgt 478  Q
    ||||||||||||||||||||||||||||||||||||    
T  9928178 acaaacatggttcctttcatttttgcaaccaattgt 9928143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 32507029 - 32506987
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatt 435  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  32507029 tttatcttttgttgtagaaataacttatacataaacacttatt 32506987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 11188253 - 11188299
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatttgct 439  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  11188253 tttatcttttgttatagaaacaacttatacataagcacttatatgct 11188299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 43812456 - 43812502
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatttgct 439  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||    
T  43812456 tttatcttttgttatagaaataaactatacataaacacttatatgct 43812502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 1561251 - 1561210
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  1561251 tttatctttcgttatagaaataacttatacataagcacttat 1561210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 3945246 - 3945205
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  3945246 tttatcttttgttattgaaataacttatatataaacacttat 3945205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 40728516 - 40728557
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  40728516 tttatcttttgttatagaaataacttatgcatgaacacttat 40728557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 4558770 - 4558730
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  4558770 tttatcttttattatagaaatagcttatacataaacactta 4558730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 10939379 - 10939343
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaaca 429  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10939379 tttatcttttgtaatagaaataacttatacataaaca 10939343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 10114467 - 10114421
Alignment:
Q  388 cttaatttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||| ||||||||||| |||||||||| ||||||||||| |||||||    
T  10114467 cttattttatcttttgctatagaaatagcttatacataagcacttat 10114421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 1433513 - 1433476
Alignment:
Q  397 tcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  1433513 tcttttattatagaaataacttatacataaccacttat 1433476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 4763890 - 4763849
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||| | |||||||||||| |||||||||||||    
T  4763890 tttatcttttgttgtcgaaataacttatgcataaacacttat 4763849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Original strand, 10062229 - 10062262
Alignment:
Q  397 tcttttgttatagaaataacttatacataaacac 430  Q
    ||||||| ||||||||||||||||||||||||||    
T  10062229 tcttttggtatagaaataacttatacataaacac 10062262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 14482174 - 14482133
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  14482174 tttatcttttgttatagaaatagtttatacataagcacttat 14482133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 26056057 - 26056016
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||| ||||| || |||||||||||||||||||    
T  26056057 tttatcttttgttttagaattagcttatacataaacacttat 26056016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 26215468 - 26215435
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||| |||||||||||    
T  26215468 tttatcttttgttatagaaatagcttatacataa 26215435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 422
Target Start/End: Complemental strand, 26820171 - 26820142
Alignment:
Q  393 tttatcttttgttatagaaataacttatac 422  Q
    ||||||||||||||||||||||||||||||    
T  26820171 tttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 29699226 - 29699193
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||||||| |||||||    
T  29699226 tttatcttttgttatagaaataacttgtacataa 29699193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 421
Target Start/End: Complemental strand, 33522459 - 33522430
Alignment:
Q  392 atttatcttttgttatagaaataacttata 421  Q
    ||||||||||||||||||||||||||||||    
T  33522459 atttatcttttgttatagaaataacttata 33522430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 38561698 - 38561657
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||| |||||||||||| ||| ||||||||    
T  38561698 tttatcttttgttatataaataacttatatatagacacttat 38561657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 38874618 - 38874577
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||| |||| ||||| |||||||||||||||||||||    
T  38874618 tttatctttagttacagaaacaacttatacataaacacttat 38874577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 42597373 - 42597340
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||| |||||||||||    
T  42597373 tttatcttttgttatagaaatagcttatacataa 42597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 1112830 - 1112786
Alignment:
Q  388 cttaatttatcttttgttatagaaataacttatacataaacactt 432  Q
    |||| |||||||||||||||||||||| | ||||||||| |||||    
T  1112830 cttattttatcttttgttatagaaatagcatatacataagcactt 1112786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 31884566 - 31884534
Alignment:
Q  393 tttatcttttgttatagaaataacttatacata 425  Q
    ||||| |||||||||||||||||||||||||||    
T  31884566 tttatattttgttatagaaataacttatacata 31884534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 51044514 - 51044597
Alignment:
Q  350 ataagttctataggatagcttatgaaaacagattatggc-ttaatttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||| |||||||||||||||||||| | | || | ||| |||||||||||||||||||||| ||||||||||||||||||    
T  51044514 ataagttctctaggatagcttatgaaaaca-agtttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 21043280 - 21043351
Alignment:
Q  361 aggatagcttatgaaaacagattatggct-taatttatcttttgtta-tagaaataacttatacataaacactt 432  Q
    |||||||||||||||||||| |||   || ||||||||||||||||| ||||||||||||||||| ||||||||    
T  21043280 aggatagcttatgaaaacagtttaa--ctataatttatcttttgttaatagaaataacttatacacaaacactt 21043351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 4191711 - 4191670
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  4191711 tttatcttttgttatagaaatagcttatacataagcacttat 4191670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 24936282 - 24936241
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  24936282 tttatattttgttatagaaataacttatacataaccacttat 24936241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 28623261 - 28623220
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  28623261 tttatcttttgttatataaataacttatacataagcacttat 28623220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 42641731 - 42641772
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  42641731 tttatcttttgttatggaaatagcttatacataaacacttat 42641772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 47970290 - 47970249
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  47970290 tttatcttttgttatagaaatagcttatacataagcacttat 47970249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 427
Target Start/End: Original strand, 3176223 - 3176254
Alignment:
Q  396 atcttttgttatagaaataacttatacataaa 427  Q
    ||||||||||||||||||||||||||||||||    
T  3176223 atcttttgttatagaaataacttatacataaa 3176254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 426
Target Start/End: Complemental strand, 19422388 - 19422357
Alignment:
Q  395 tatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||||||||||||||||||||    
T  19422388 tatcttttgttatagaaataacttatacataa 19422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 21683578 - 21683617
Alignment:
Q  394 ttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  21683578 ttatcttttgttatagaaatagtttatacataaacactta 21683617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 21952547 - 21952504
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttattt 436  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
T  21952547 tttaccttttgttatagaaatagcttatgcataaacacttattt 21952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 428
Target Start/End: Original strand, 44119260 - 44119295
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaac 428  Q
    ||||||||||| ||||||||||||||||||||||||    
T  44119260 tttatcttttgctatagaaataacttatacataaac 44119295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 428
Target Start/End: Original strand, 52645847 - 52645882
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaac 428  Q
    |||||||||||||||||||||| |||||||||||||    
T  52645847 tttatcttttgttatagaaatagcttatacataaac 52645882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 4663801 - 4663835
Alignment:
Q  400 tttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||||||| |||||||    
T  4663801 tttgttatagaaataacttatacataagcacttat 4663835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 6364121 - 6364088
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||| |||||||||||    
T  6364121 tttatcttttgttatagaaatagcttatacataa 6364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 11389498 - 11389457
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||| |||||||||||| |||||||||| |||||||    
T  11389498 tttatctttttttatagaaataatttatacataagcacttat 11389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 20907145 - 20907104
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||| ||||| ||||| |||||||||||||||||||    
T  20907145 tttatcttttcttatacaaatagcttatacataaacacttat 20907104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 434
Target Start/End: Original strand, 27321941 - 27321970
Alignment:
Q  405 tatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||||||||||    
T  27321941 tatagaaataacttatacataaacacttat 27321970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 30024672 - 30024639
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||||||||| |||||    
T  30024672 tttatcttttgttatagaaataacttatgcataa 30024639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 430
Target Start/End: Complemental strand, 35743276 - 35743239
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacac 430  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  35743276 tttatcttttgttatagaaataacttgtacatcaacac 35743239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 36048775 - 36048731
Alignment:
Q  389 ttaatttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||    
T  36048775 ttaatttatcttttgttatagaaatagcttata-ataagcacttat 36048731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 44249258 - 44249225
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||| ||||||||||||||||||    
T  44249258 tttatcttttgttattgaaataacttatacataa 44249225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 46176104 - 46176145
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||||||||  |||| |||||||    
T  46176104 tttatcttttgttatagaaataacttatgtataagcacttat 46176145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 4798657 - 4798697
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
T  4798657 tttatcttttgatatagaaatagcttatacataagcactta 4798697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 432
Target Start/End: Complemental strand, 23819055 - 23819023
Alignment:
Q  400 tttgttatagaaataacttatacataaacactt 432  Q
    |||||||| ||||||||||||||||||||||||    
T  23819055 tttgttatggaaataacttatacataaacactt 23819023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 29601042 - 29601082
Alignment:
Q  350 ataagttctataggatagcttatgaaaacagattatggctt 390  Q
    ||||||||| ||||||||| |||||||||||||||| ||||    
T  29601042 ataagttctctaggatagcatatgaaaacagattatagctt 29601082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 49803183 - 49803151
Alignment:
Q  393 tttatcttttgttatagaaataacttatacata 425  Q
    ||||||||||| |||||||||||||||||||||    
T  49803183 tttatcttttgctatagaaataacttatacata 49803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 38033940 - 38033896
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatttg 437  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  38033940 tttatcttttgttatataaataacttatacataaacacttatttg 38033896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 35135760 - 35135801
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  35135760 tttatcttttgttatagaaatatcttatacataaacacttat 35135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 18704132 - 18704166
Alignment:
Q  392 atttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||||||||||||||||    
T  18704132 atttatcttttgttatagaaataacttatacataa 18704166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 40048378 - 40048419
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  40048378 tttatcttttgttatagaaacaacttatacataagcacttat 40048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 433
Target Start/End: Complemental strand, 31208449 - 31208405
Alignment:
Q  389 ttaatttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||    
T  31208449 ttaatttatattttgttatagaaataacttatgcataagcactta 31208405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Original strand, 7096225 - 7096264
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactt 432  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  7096225 tttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 426
Target Start/End: Complemental strand, 8089277 - 8089242
Alignment:
Q  391 aatttatcttttgttatagaaataacttatacataa 426  Q
    |||||| |||||||||||||||||||||||||||||    
T  8089277 aatttaacttttgttatagaaataacttatacataa 8089242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 13224401 - 13224362
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactt 432  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  13224401 tttatcttttgttatagaaatagcttatacataagcactt 13224362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 34117626 - 34117669
Alignment:
Q  388 cttaatttatcttttgttatagaaataacttatacataaacact 431  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||    
T  34117626 cttattttatcttttgttaaagaaataacttatacataagcact 34117669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 435
Target Start/End: Complemental strand, 10907339 - 10907309
Alignment:
Q  405 tatagaaataacttatacataaacacttatt 435  Q
    |||||||||||||||||||||||||||||||    
T  10907339 tatagaaataacttatacataaacacttatt 10907309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Original strand, 12460093 - 12460131
Alignment:
Q  388 cttaatttatcttttgttatagaaataacttatacataa 426  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  12460093 cttattttatcttttgttatagaaatagcttatacataa 12460131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 435
Target Start/End: Original strand, 33459037 - 33459075
Alignment:
Q  397 tcttttgttatagaaataacttatacataaacacttatt 435  Q
    |||||||||||||||||||||||||||||| || |||||    
T  33459037 tcttttgttatagaaataacttatacataagcatttatt 33459075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 1773523 - 1773556
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||| |||||||||||    
T  1773523 tttatcttttgttatagaaatagcttatacataa 1773556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 12407759 - 12407792
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||| |||||||||||    
T  12407759 tttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 14714937 - 14714978
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| |||||||||||||||| ||||||||||| |||||||    
T  14714937 tttatgttttgttatagaaatagcttatacataatcacttat 14714978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 20982233 - 20982274
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||| ||||||||||||||| ||||||||||| |||||||    
T  20982233 tttatcctttgttatagaaatagcttatacataagcacttat 20982274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 26516270 - 26516229
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||| |||||||| ||||||||||| |||||||    
T  26516270 tttatcttttgttttagaaatagcttatacataagcacttat 26516229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 27106021 - 27106062
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||| |||||||| ||| |||||||    
T  27106021 tttatcttttgttatagaaatgacttatacgtaagcacttat 27106062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 29117028 - 29117061
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||||| |||||||||    
T  29117028 tttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 29588852 - 29588811
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| |||||||||||||||| ||||||||||| |||||||    
T  29588852 tttatattttgttatagaaatagcttatacataagcacttat 29588811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 40097501 - 40097542
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||| ||||||||||||||||||||||||  |||||||    
T  40097501 tttatcttctgttatagaaataacttatacatacgcacttat 40097542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 40499773 - 40499814
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||| ||||||||||||||||||| ||||||| |||||||    
T  40499773 tttatcatttgttatagaaataacttgtacataagcacttat 40499814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 4991042 - 4991082
Alignment:
Q  394 ttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||| ||||| |||||||| ||||||||||    
T  4991042 ttatcttttgttataaaaatagcttatacacaaacacttat 4991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 9927557 - 9927517
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  9927557 tttatcttttactatacaaataacttatacataaacactta 9927517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 13508504 - 13508464
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  13508504 tttagcttttgttatagaaatagcttaaacataaacactta 13508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 21782667 - 21782707
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  21782667 tttagcttttgttatagaaatagcttaaacataaacactta 21782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 12985379 - 12985459
Alignment:
Q  350 ataagttctataggatagcttatgaaaacagattatggcttaatttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||  |||||||||||||||||||| ||||  ||| |||| | |||||||||||||| ||||||||||||||||||||    
T  12985379 ataagttcttgaggatagcttatgaaaacagtttat--ctttattt-tattttgttatagaaacaacttatacataaacactta 12985459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 24605117 - 24605154
Alignment:
Q  396 atcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24605117 atcttttgttatagaaataacttatacataaacactta 24605154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 20173981 - 20174027
Alignment:
Q  388 cttaatttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||    
T  20173981 cttattttatcttttgttatagaaataactaatacataagcacttat 20174027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 2128349 - 2128390
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  2128349 tttatcttttgttatagaaatagcttatacataaacgcttat 2128390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 16790186 - 16790227
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  16790186 tttatcttttgttatagaaataacttatatataagcacttat 16790227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 32663615 - 32663578
Alignment:
Q  392 atttatcttttgttatagaaataacttatacataaaca 429  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  32663615 atttatcttttgttatagaaataacttatgcataaaca 32663578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 424
Target Start/End: Complemental strand, 36887494 - 36887463
Alignment:
Q  393 tttatcttttgttatagaaataacttatacat 424  Q
    ||||||||||||||||||||||||||||||||    
T  36887494 tttatcttttgttatagaaataacttatacat 36887463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 37788832 - 37788794
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactt 432  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  37788832 tttatcttttgttata-aaataacttatacataaacactt 37788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Original strand, 43116526 - 43116565
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactt 432  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  43116526 tttatcttttgttatagaaatagcttacacataaacactt 43116565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 24158607 - 24158641
Alignment:
Q  400 tttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||||||| |||||||    
T  24158607 tttgttatagaaataacttatacataagcacttat 24158641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 434
Target Start/End: Original strand, 28283674 - 28283716
Alignment:
Q  392 atttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||| |||||||| ||||| |||||||    
T  28283674 atttatcttttgttatagaagtaacttatgcataagcacttat 28283716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 2071027 - 2070986
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||| ||||||| ||||||||| |||||||||    
T  2071027 tttatcttttgttaaagaaatagcttatacattaacacttat 2070986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 2304339 - 2304380
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||| ||||||||||| ||||||||||| |||||||    
T  2304339 tttatcttttattatagaaatagcttatacataatcacttat 2304380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 8142808 - 8142849
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||| |||| ||||| |||||||||||||||||||    
T  8142808 tttatcttttgatataaaaatagcttatacataaacacttat 8142849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 423
Target Start/End: Original strand, 24235782 - 24235811
Alignment:
Q  394 ttatcttttgttatagaaataacttataca 423  Q
    ||||||||||||||||||||||||||||||    
T  24235782 ttatcttttgttatagaaataacttataca 24235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 38462253 - 38462212
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||| |||||||||| |||||| ||||||||||||    
T  38462253 tttatcttttggtatagaaatagcttataaataaacacttat 38462212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 39743877 - 39743836
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||    
T  39743877 tttatattttgttattgaaataacttatacataaacaattat 39743836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 39971291 - 39971250
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||| || |||||||||||||| |||||||    
T  39971291 tttatcttttgttatataagtaacttatacataagcacttat 39971250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 41028953 - 41028990
Alignment:
Q  397 tcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  41028953 tcttttgttatagaaatagcttatacataagcacttat 41028990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 41159081 - 41159040
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  41159081 tttatctttagttataggaataacttatacataagcacttat 41159040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 42084349 - 42084390
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||| ||||||||||||||| |||||||||| ||||||||    
T  42084349 tttatcctttgttatagaaatagcttatacatagacacttat 42084390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 48364977 - 48365010
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||| ||||||||||||||||||    
T  48364977 tttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 48597682 - 48597727
Alignment:
Q  388 cttaatttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||||||||  ||| |||||| ||||||    
T  48597682 cttaatttatcttttgttatagaaatagtttaaacataagcactta 48597727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 1395643 - 1395611
Alignment:
Q  393 tttatcttttgttatagaaataacttatacata 425  Q
    |||||||||||||||||||||| ||||||||||    
T  1395643 tttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 433
Target Start/End: Complemental strand, 1809973 - 1809945
Alignment:
Q  405 tatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||||||||||    
T  1809973 tatagaaataacttatacataaacactta 1809945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 2153654 - 2153614
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||| |  |||||||||||||||||||||    
T  2153654 tttatcttttgttatacacgtaacttatacataaacactta 2153614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 3182460 - 3182500
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  3182460 tttatctttttctatagaagtaacttatacataaacactta 3182500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 20192704 - 20192744
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  20192704 tttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 23816024 - 23815992
Alignment:
Q  394 ttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||| |||||||||||||||||||||||    
T  23816024 ttatcttttattatagaaataacttatacataa 23815992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 30669068 - 30669104
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaaca 429  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  30669068 tttatcttttgttataaaaatagcttatacataaaca 30669104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 421
Target Start/End: Original strand, 32095289 - 32095317
Alignment:
Q  393 tttatcttttgttatagaaataacttata 421  Q
    |||||||||||||||||||||||||||||    
T  32095289 tttatcttttgttatagaaataacttata 32095317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 436
Target Start/End: Complemental strand, 2894793 - 2894746
Alignment:
Q  389 ttaatttatcttttgttatagaaataacttatacataaacacttattt 436  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2894793 ttaatttatcttttgttatagaaatagcttatacatgaacacttattt 2894746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 2223120 - 2223079
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  2223120 tttatcttttgttatagaaatagcttatacataaacacttat 2223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 46223166 - 46223211
Alignment:
Q  389 ttaatttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  46223166 ttaatttatcttttgttatggaaatagcttatacataaacacttat 46223211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 432
Target Start/End: Original strand, 35809002 - 35809041
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactt 432  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  35809002 tttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 434
Target Start/End: Complemental strand, 25507320 - 25507282
Alignment:
Q  396 atcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  25507320 atcttttggtatagaaataacttatacataaacacttat 25507282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 25558290 - 25558328
Alignment:
Q  396 atcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  25558290 atcttttggtatagaaataacttatacataaacacttat 25558328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 25558488 - 25558526
Alignment:
Q  396 atcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  25558488 atcttttggtatagaaataacttatacataaacacttat 25558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 1432065 - 1432098
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||||||||||||||||||||||    
T  1432065 tttatcttttgttatagaaataacttatacataa 1432098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 4591514 - 4591473
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  4591514 tttatcttttgttatagagatagcttatacataaacacttat 4591473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 27481392 - 27481433
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  27481392 tttatcctttgttatagaaatagcttatacataaacacttat 27481433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 33894600 - 33894555
Alignment:
Q  388 cttaatttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||    
T  33894600 cttattttatcttttgttatagaaatagcttatacataagcactta 33894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 44241832 - 44241791
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  44241832 tttatctgttgttatagaaataacttatacatacacacttat 44241791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 28165063 - 28165023
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  28165063 tttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 434
Target Start/End: Complemental strand, 5939050 - 5939015
Alignment:
Q  399 ttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||| |||||||||||||||||||||||||    
T  5939050 ttttgttataaaaataacttatacataaacacttat 5939015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 6552339 - 6552409
Alignment:
Q  363 gatagcttatgaaaacagattatggcttaatttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| ||||||||| || |||| ||| | ||||||||||||| |||||||||||| ||||||| |||||||    
T  6552339 gatagtttatgaaaatagtttatagct-attttatcttttgttgtagaaataacttgtacataagcacttat 6552409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 427
Target Start/End: Complemental strand, 28702732 - 28702698
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaa 427  Q
    |||||||||||||||||||||| ||||||||||||    
T  28702732 tttatcttttgttatagaaatagcttatacataaa 28702698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 2013171 - 2013138
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||||||||||| ||||||||||    
T  2013171 tttatcttttgttatagaaataaattatacataa 2013138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 3610838 - 3610879
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||| |||||||| ||||||||||| |||||||    
T  3610838 tttatcttttgttgtagaaatagcttatacataagcacttat 3610879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 7244674 - 7244633
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  7244674 tttatcttttgatatagaaatagcttatacataagcacttat 7244633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 21853214 - 21853255
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||| |||||||||||||||| |||| |||||||    
T  21853214 tttatcttttgtaatagaaataacttatatataatcacttat 21853255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 24973916 - 24973875
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||| ||||||| |||||||    
T  24973916 tttatcttttgttatagaaatagcttttacataagcacttat 24973875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 30134021 - 30133980
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  30134021 tttatcttttgttgtaaaaatagcttatacataaacacttat 30133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 30496676 - 30496635
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  30496676 tttatattttgttatagaaatagtttatacataaacacttat 30496635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 49060512 - 49060471
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| |||||||||||||||| |||||||||||| ||||||    
T  49060512 tttattttttgttatagaaatagcttatacataaatacttat 49060471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 5373197 - 5373157
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  5373197 tttatcttttgttatagaaatagcatatacataagcactta 5373157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 10079438 - 10079482
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatttg 437  Q
    ||||||||||||||||||| || |||||||||| | |||||||||    
T  10079438 tttatcttttgttatagaagtagcttatacatacaaacttatttg 10079482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 22388002 - 22388042
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||| ||||| ||||| ||||||    
T  22388002 tttatcttttgttatagaaatagcttatccataagcactta 22388042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 38713128 - 38713164
Alignment:
Q  396 atcttttgttatagaaataacttatacataaacactt 432  Q
    |||||||||||||||||||||||||||| || |||||    
T  38713128 atcttttgttatagaaataacttatacacaatcactt 38713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 421
Target Start/End: Original strand, 39591565 - 39591593
Alignment:
Q  393 tttatcttttgttatagaaataacttata 421  Q
    |||||||||||||||||||||||||||||    
T  39591565 tttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 10143144 - 10143102
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatt 435  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  10143144 tttatcttttgttatagaaataacttatacataagcacttatt 10143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 10150727 - 10150686
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  10150727 tttatcttttattatagaaataacttatacataaacacttat 10150686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 15171226 - 15171181
Alignment:
Q  389 ttaatttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  15171226 ttaatttatcttctgttatagaaaaaacttatacataaacacttat 15171181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 38239649 - 38239689
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  38239649 tttatcttttgttatagaaatagcttatacataaacactta 38239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 13864622 - 13864581
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  13864622 tttaccttttgttatagaaatagcttatacataaacacttat 13864581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 43431542 - 43431583
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  43431542 tttatcttttgttattgaaataacttatacattaacacttat 43431583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 5045255 - 5045295
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  5045255 tttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 15173495 - 15173459
Alignment:
Q  396 atcttttgttatagaaataacttatacataaacactt 432  Q
    |||||||||||||||||||||||||||||| ||||||    
T  15173495 atcttttgttatagaaataacttatacatagacactt 15173459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 41033048 - 41033088
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  41033048 tttatcttttgttatagaaatagcttatacataagcactta 41033088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 424
Target Start/End: Original strand, 40837522 - 40837557
Alignment:
Q  389 ttaatttatcttttgttatagaaataacttatacat 424  Q
    |||||||||||||||||||||||||| |||||||||    
T  40837522 ttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Original strand, 9875559 - 9875593
Alignment:
Q  397 tcttttgttatagaaataacttatacataaacact 431  Q
    ||||||| |||||||||||||||||||||||||||    
T  9875559 tcttttgctatagaaataacttatacataaacact 9875593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 3611198 - 3611157
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||| |||||| |||||||||||||||||||||| |||||||    
T  3611198 tttaccttttgctatagaaataacttatacataagcacttat 3611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 3673779 - 3673738
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| ||||||||||||||||||| |||||||| |||||||    
T  3673779 tttatattttgttatagaaataactaatacataagcacttat 3673738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 5133744 - 5133711
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||| |||||||||||    
T  5133744 tttatcttttgttatagaaatagcttatacataa 5133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 7825224 - 7825183
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||| ||||| |||||||| ||||||||||    
T  7825224 tttatcttttgttataaaaatagcttatacagaaacacttat 7825183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 9478271 - 9478230
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  9478271 tttatctactgttatagaaatagcttatacataaacacttat 9478230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 11344382 - 11344423
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||| ||||| |||||||    
T  11344382 tttatcttttgttatagaaatatcttatgcataagcacttat 11344423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 24141747 - 24141780
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||| |||||||||||||||||||||    
T  24141747 tttatcttttgtgatagaaataacttatacataa 24141780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 25609768 - 25609727
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||| ||||||||||| ||||||||||| |||||||    
T  25609768 tttatcttttcttatagaaatagcttatacataagcacttat 25609727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 28803604 - 28803645
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||| ||||||||||||| |||| |||||||    
T  28803604 tttatcttttgttatcgaaataacttatatataagcacttat 28803645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 31461410 - 31461369
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| |||||| |||| |||||||    
T  31461410 tttatcttttgttatagaaatagcttatatataaccacttat 31461369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 34054999 - 34055040
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| | ||||||||| |||||||    
T  34054999 tttatcttttgttatagaaatagcctatacataagcacttat 34055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 44606186 - 44606227
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||  ||||| |||||||||||||||||||    
T  44606186 tttatcttttgttatgaaaatagcttatacataaacacttat 44606227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 421
Target Start/End: Original strand, 1939430 - 1939458
Alignment:
Q  393 tttatcttttgttatagaaataacttata 421  Q
    |||||||||||||||||||||||||||||    
T  1939430 tttatcttttgttatagaaataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 2416285 - 2416245
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||||| || ||||||||||||||||||| ||||||    
T  2416285 tttatcttttgctacagaaataacttatacataagcactta 2416245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 428
Target Start/End: Complemental strand, 29430729 - 29430693
Alignment:
Q  392 atttatcttttgttatagaaataacttatacataaac 428  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  29430729 atttaacttttgttatagaaatagcttatacataaac 29430693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 40672894 - 40672934
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||| | |||||||||||||||||||||| |||||    
T  40672894 tttatcttttttcatagaaataacttatacataaaaactta 40672934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 41022208 - 41022176
Alignment:
Q  393 tttatcttttgttatagaaataacttatacata 425  Q
    ||||||||||||||| |||||||||||||||||    
T  41022208 tttatcttttgttattgaaataacttatacata 41022176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 430
Target Start/End: Original strand, 5554863 - 5554900
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacac 430  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5554863 tttatcttttgttatagaaataacttatacataaacac 5554900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 24836297 - 24836338
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  24836297 tttatcttttgttatagaaataacttatacataaatacttat 24836338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 33116577 - 33116536
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  33116577 tttatcttttgttaaagaaataacttatacataaacacttat 33116536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 33068659 - 33068703
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatttg 437  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  33068659 tttatcttttgttatagaaataacttatacataagcatttatttg 33068703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 427
Target Start/End: Original strand, 34544548 - 34544582
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaa 427  Q
    |||||||||||||||||||||||||||||||||||    
T  34544548 tttatcttttgttatagaaataacttatacataaa 34544582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 31461650 - 31461609
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  31461650 tttatcttttgttatagaaatagcttatacataagcacttat 31461609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 32975950 - 32975909
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  32975950 tttatattttgttacagaaataacttatacataaacacttat 32975909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 4247732 - 4247772
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  4247732 tttatcttttgttatagaaatagcttatacataagcactta 4247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 33500579 - 33500615
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaaca 429  Q
    |||||||||||||||||||||| ||||||||||||||    
T  33500579 tttatcttttgttatagaaatagcttatacataaaca 33500615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 33259790 - 33259747
Alignment:
Q  391 aatttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||    
T  33259790 aatttatcttttgttataaaaatagcttatacataagcacttat 33259747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 507192 - 507154
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacact 431  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  507192 tttatcttttgttatagaaataatttatacataagcact 507154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 434
Target Start/End: Original strand, 2548316 - 2548346
Alignment:
Q  404 ttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||||||||||||    
T  2548316 ttatagaaataacttatacataaacacttat 2548346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 10836794 - 10836760
Alignment:
Q  392 atttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||||||| |||||||||||||||    
T  10836794 atttatcttttgttatagatataacttatacataa 10836760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 423
Target Start/End: Complemental strand, 31672042 - 31672012
Alignment:
Q  393 tttatcttttgttatagaaataacttataca 423  Q
    |||||||||||||||||||||||||||||||    
T  31672042 tttatcttttgttatagaaataacttataca 31672012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 2023727 - 2023768
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||| ||||||||||||||||| || |||||||||    
T  2023727 tttatcttttgctatagaaataacttatatatgaacacttat 2023768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 6647360 - 6647323
Alignment:
Q  394 ttatcttttgttatagaaataacttatacataaacact 431  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  6647360 ttattttttgttatagaaataacttatacataagcact 6647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 9559639 - 9559672
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||| ||||||||||||||||||||||    
T  9559639 tttatcttttgctatagaaataacttatacataa 9559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 31668783 - 31668824
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| |||||||||||||||| ||||||||||| |||||||    
T  31668783 tttatgttttgttatagaaatagcttatacataagcacttat 31668824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 32843413 - 32843454
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||| || ||||||||||||||||||||||| |||||||    
T  32843413 tttatctcttattatagaaataacttatacataagcacttat 32843454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 2514674 - 2514634
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||| ||||||||||| ||||||||||| ||||||    
T  2514674 tttatcttttattatagaaatagcttatacataagcactta 2514634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 32513791 - 32513759
Alignment:
Q  399 ttttgttatagaaataacttatacataaacact 431  Q
    |||||||||||||||||||||| ||||||||||    
T  32513791 ttttgttatagaaataacttatgcataaacact 32513759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 27140457 - 27140417
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  27140457 tttatcttttgttatagaaataacttacacataaacactta 27140417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 37818436 - 37818392
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttatttg 437  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  37818436 tttatctcttgttatagaaataacttatacataagcacttatttg 37818392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 15360866 - 15360827
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactt 432  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  15360866 tttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 4202227 - 4202268
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  4202227 tttatcttttgttatagaaataacttatacttaagcacttat 4202268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 13037836 - 13037795
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttat 13037795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 16982034 - 16982075
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  16982034 tttatcttttgttatcgaaataagttatacataaacacttat 16982075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 37593767 - 37593808
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  37593767 tttatcttgtgttatagaaataccttatacataaacacttat 37593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 4200201 - 4200161
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  4200201 tttatcttttgttataaaaataacttatatataaacactta 4200161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 49517042 - 49517006
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaaca 429  Q
    ||||||||||||||||||||||||||||||| |||||    
T  49517042 tttatcttttgttatagaaataacttatacacaaaca 49517006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 434
Target Start/End: Complemental strand, 26679244 - 26679205
Alignment:
Q  395 tatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  26679244 tatcgtttgttatagaaataacttacacataaacacttat 26679205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 45327582 - 45327539
Alignment:
Q  390 taatttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||| ||||||||||||||||| |||||||||| |||||||    
T  45327582 taatttaccttttgttatagaaatatcttatacatatacactta 45327539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Original strand, 24146362 - 24146396
Alignment:
Q  398 cttttgttatagaaataacttatacataaacactt 432  Q
    ||||||||||||||||||||||||||||| |||||    
T  24146362 cttttgttatagaaataacttatacataagcactt 24146396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 423
Target Start/End: Complemental strand, 49557113 - 49557083
Alignment:
Q  393 tttatcttttgttatagaaataacttataca 423  Q
    |||||||||||||||||||||||||||||||    
T  49557113 tttatcttttgttatagaaataacttataca 49557083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 426
Target Start/End: Complemental strand, 50319306 - 50319231
Alignment:
Q  350 ataagttctataggatagcttatgaaaacagattatggcttaattt-atcttttgttatagaaataacttatacataa 426  Q
    ||||| ||| ||||||||||||||||||||  ||  | ||| |||| ||||||||||||||||||| |||||||||||    
T  50319306 ataagctctctaggatagcttatgaaaacaactt--gactttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 6981464 - 6981423
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||    
T  6981464 tttattttttgttatagaaataatttatatataaacacttat 6981423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 20713620 - 20713587
Alignment:
Q  401 ttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||||||||| ||||    
T  20713620 ttgttatagaaataacttatacataaacatttat 20713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 23895308 - 23895275
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    |||||||||||||||||||||| |||||||||||    
T  23895308 tttatcttttgttatagaaatagcttatacataa 23895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 29007810 - 29007847
Alignment:
Q  389 ttaatttatcttttgttatagaaataacttatacataa 426  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  29007810 ttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 29046011 - 29046052
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  29046011 tttatcttttgttatagaaatatcttatacacaagcacttat 29046052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 430
Target Start/End: Original strand, 33339518 - 33339555
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacac 430  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  33339518 tttatcttttggtatagaaatagcttatacataaacac 33339555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 36641847 - 36641814
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||||||||||||||||| ||||    
T  36641847 tttatcttttgttatagaaataacttatatataa 36641814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 45769841 - 45769882
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||||| ||| |||||| |||||||    
T  45769841 tttatcttttgttatagaaataatttacacataagcacttat 45769882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 426
Target Start/End: Original strand, 172676 - 172708
Alignment:
Q  394 ttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||||||||| |||||||||||    
T  172676 ttatcttttgttatagaaatagcttatacataa 172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 6976919 - 6976887
Alignment:
Q  394 ttatcttttgttatagaaataacttatacataa 426  Q
    ||||||||||||||||||||| |||||||||||    
T  6976919 ttatcttttgttatagaaatatcttatacataa 6976887  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 17269217 - 17269181
Alignment:
Q  398 cttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||| |||||||||||||||||||| |||||||    
T  17269217 cttttgttctagaaataacttatacataagcacttat 17269181  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 38651507 - 38651547
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    ||||||||||||||||||| || ||||||||||| ||||||    
T  38651507 tttatcttttgttatagaattagcttatacataagcactta 38651547  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 45999387 - 45999427
Alignment:
Q  394 ttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||| ||||||||| | |||||||    
T  45999387 ttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 48830174 - 48830210
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaaca 429  Q
    ||||||||| || ||||||||||||||||||||||||    
T  48830174 tttatctttggtaatagaaataacttatacataaaca 48830210  T

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Target: scaffold0590 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 1172 - 1213
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  1172 tttatcttttgttatagaaatagcttatacataagcacttat 1213  T

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Target: scaffold0275 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 2803 - 2762
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  2803 tttatcttttgttatagaaatagcttatacataagcacttat 2762  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 42589 - 42548
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacacttat 434  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  42589 tttatcttttgttatagaaatgacttatacataagcacttat 42548  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 27548 - 27508
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataaacactta 433  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  27548 tttatcttctgttatagaaataacttatacataagcactta 27508  T

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Target: scaffold0508 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 9873 - 9906
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||| ||||||||||||||||||||||||||||    
T  9873 tttattttttgttatagaaataacttatacataa 9906  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 104232 - 104265
Alignment:
Q  393 tttatcttttgttatagaaataacttatacataa 426  Q
    ||||| ||||||||||||||||||||||||||||    
T  104232 tttattttttgttatagaaataacttatacataa 104265  T

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