View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6113_high_7 (Length: 253)
Name: NF6113_high_7
Description: NF6113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6113_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 26642377 - 26642621
Alignment:
| Q |
1 |
aaacgtatataattagctccaactagagaatatatatatgtgcgcgcgcatgtgtttgtgatgaaaaaacctatcaatttaggtaatgtatactgtatat |
100 |
Q |
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||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| |
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| T |
26642377 |
aaacgtatataattagctccaactagagaatatatgt--gtgcgcgcgcgtgtgtttgtgatgaaaaaacctatcaatttagataatgtatattgtatat |
26642474 |
T |
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| Q |
101 |
atgcataaaatcaaacgttactagataattctggatcataaaaggattcttacattaggcgggataggttcctgtgatgtgttctgatacccaagtgatg |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
26642475 |
atgcataaaatcaaacgttactaggtaattctggatcataaaaggattcttacattaggtgggataggttcctgtgatgtgttctgatacccaagtgatg |
26642574 |
T |
|
| Q |
201 |
gaggtatgacgactctacgaataccaccgactttcattcatctcact |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
26642575 |
gaggtatgacgactctacgaataccaccgactttcattgatcgcact |
26642621 |
T |
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