View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6117_low_1 (Length: 414)
Name: NF6117_low_1
Description: NF6117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6117_low_1 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 11 - 387
Target Start/End: Original strand, 3934854 - 3935230
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3934854 |
catcatcttttggatgtcaaagcaatctagaaaccctggttttaaaagccactcaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
3934953 |
T |
 |
| Q |
111 |
aaagttacacataggcggttgctcaaagattctggctctacccgaccttcctgtatcagttgaaatcctggatttaagttctagtaacattgagatcata |
210 |
Q |
| |
|
||| ||| ||||| |||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
3934954 |
aaaattaaacatatgcggttgcaaaaagcttctggctctacccgagcttcctttatcagttgaaatcctggatttaagaagttgtaacattgagatcata |
3935053 |
T |
 |
| Q |
211 |
ccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagcttctggctctacctgagctttcttcatcagttgaaattc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3935054 |
ccttcaagcatcaagaatcttacgaggctaagaaaactagacatacgattttccaacaagcttctggctctacccgagctttcttcatcagttgaaattc |
3935153 |
T |
 |
| Q |
311 |
tacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaa |
387 |
Q |
| |
|
|||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
3935154 |
tacttgttcactgtgactcactgaagtctgtattgttcccttcaacagttgctgaacaattcaaggaaaacaagaaa |
3935230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 199 - 393
Target Start/End: Original strand, 3921691 - 3921888
Alignment:
| Q |
199 |
attgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagcttctggctctacctgagctttcttcat |
298 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||| || |||||| || || |||||| |||||||||||||||||||| |||||| |||||| |||||| |
|
|
| T |
3921691 |
attgagagcatacattcaagcatcaagaatcttacaagactaagaaaattatacatacgattttccaacaagcttctggttctacccgagcttccttcat |
3921790 |
T |
 |
| Q |
299 |
cagttgaaattctacttgttg---actgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaagggtt |
393 |
Q |
| |
|
||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3921791 |
cagttgaaagtctacttgttgacaactgtgaatcactaaagactgtattgttcccttcaacagttgctgaacaattcaaggaaaacaagaaaagggtt |
3921888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 199 - 390
Target Start/End: Complemental strand, 4023540 - 4023349
Alignment:
| Q |
199 |
attgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagcttctggctctacctgagctttcttcat |
298 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || |||||| || ||||||||| ||||| | ||||| |||| |||||| |||||| |||||| |
|
|
| T |
4023540 |
attgagagcataccttcaagcatcaagaatcttacaagactaagaaaattagacatacgattttgctcaaagctcctggttctacccgagcttccttcat |
4023441 |
T |
 |
| Q |
299 |
cagttgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaagg |
390 |
Q |
| |
|
||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
4023440 |
cagttgaaactctacttgttgaatgtagatcactgaagactgtattgttcccttcaacagtttctgaacaattcaaggaaaacaagaaaagg |
4023349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 172 - 389
Target Start/End: Complemental strand, 3808534 - 3808314
Alignment:
| Q |
172 |
gaaatcctggatttaagttctagtaacattgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagc |
271 |
Q |
| |
|
|||| |||| ||||||||| | ||| ||||||| ||||||||||||||||||| ||||||| || |||||| || ||||||||||| || ||| |||| |
|
|
| T |
3808534 |
gaaaccctgaatttaagttacactaaaattgagagcataccttcaagcatcaaggatcttacaagactaagaaaattagacatacaaggttgcaaaaagc |
3808435 |
T |
 |
| Q |
272 |
ttctggctctacctgagctttcttcatcagttgaaattctacttgtt---gactgtgactcactaaagactgtattgttcccttcaaccgttgctgaaca |
368 |
Q |
| |
|
||||| ||||||| |||||| ||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3808434 |
ttctgtctctacccgagcttccttcatcagttgaaactctacttgttagcagctgtagatcactgaagactgtattgttcccttcaacagttgctgaaca |
3808335 |
T |
 |
| Q |
369 |
attaaaggaaaacaagaaaag |
389 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
3808334 |
attcaaggaaaacaagaaaag |
3808314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 3808563 - 3808399
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3808563 |
catcatcttttggatgtcaaagcaatctagaaaccctgaatttaagttacactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
3808464 |
T |
 |
| Q |
111 |
aaagttacacataggcggttgctcaaagattctggctctacccgaccttcctgtatcagttgaaa |
175 |
Q |
| |
|
||| ||| ||||| |||||| |||| ||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
3808463 |
aaaattagacatacaaggttgcaaaaagcttctgtctctacccgagcttccttcatcagttgaaa |
3808399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 170 - 390
Target Start/End: Complemental strand, 4000653 - 4000433
Alignment:
| Q |
170 |
ttgaaatcctggatttaagttctagtaacattgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaa |
269 |
Q |
| |
|
|||||||||||| |||||| ||| | ||||||||||||||||| |||||| |||||||||| || |||||| || ||||||||| || || | || |
|
|
| T |
4000653 |
ttgaaatcctggttttaagaaagagtgaaattgagatcataccttctagcatccagaatcttacaagactaagaaaattagacatacgatattgcttaaa |
4000554 |
T |
 |
| Q |
270 |
gcttctggctctacctgagctttcttcatcagttgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaa |
369 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||| || |||||||| |
|
|
| T |
4000553 |
gcttctggctctacctgtgcttcctttatcagttgaaactctacttgttgaatgtatatcactgaagactgtattgttcccttcaacaatttctgaacaa |
4000454 |
T |
 |
| Q |
370 |
ttaaaggaaaacaagaaaagg |
390 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
4000453 |
ttcaaggaaaacaagaaaagg |
4000433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 199 - 389
Target Start/End: Complemental strand, 3816081 - 3815888
Alignment:
| Q |
199 |
attgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagcttctggctctacctgagctttcttcat |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| | || | |||||| ||||| |||| |||||| |||||| |
|
|
| T |
3816081 |
attgagatcataccttcaagcatcaagaatcttacaagactaagaaaactagacatacgaggttgcttgaagcttgtggctttacccgagcttccttcat |
3815982 |
T |
 |
| Q |
299 |
cagttgaaattctacttgtt---gactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaag |
389 |
Q |
| |
|
||||||||| |||||||||| || | | ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
3815981 |
cagttgaaactctacttgttaaagattctttttcactgaagactgtattgttcccttcaacagttgctgaacaattcaaggaaaacaagaaaag |
3815888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 199 - 390
Target Start/End: Complemental strand, 3985464 - 3985273
Alignment:
| Q |
199 |
attgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagcttctggctctacctgagctttcttcat |
298 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||| || |||||| || |||||||| || | ||||||||||||||||||||||| | |||| |
|
|
| T |
3985464 |
attgagagcataccttcaagcatcaaggatcttacaagactaagaaaattagacataagcgattgctcggagcttctggctctacctgagcttccatcat |
3985365 |
T |
 |
| Q |
299 |
cagttgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaagg |
390 |
Q |
| |
|
|| |||||| ||||||||||||||||| ||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3985364 |
cacttgaaactctacttgttgactgtgtgtcactgaagtctgtatttttcccttcaacagttgctgaacaattaaaggaaaacaagaaaagg |
3985273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 3985520 - 3985370
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||| || | ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3985520 |
catcatcttttggatgtcaaagcaagctagaaaccctggttttaagaggtactcaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
3985421 |
T |
 |
| Q |
111 |
aaagttacacataggcggttgctcaaagattctggctctacccgaccttcc |
161 |
Q |
| |
|
||| ||| ||||| ||| |||||| || ||||||||||||| || ||||| |
|
|
| T |
3985420 |
aaaattagacataagcgattgctcggagcttctggctctacctgagcttcc |
3985370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 383
Target Start/End: Original strand, 3957152 - 3957333
Alignment:
| Q |
199 |
attgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagcttctggctctacctgagctttcttcat |
298 |
Q |
| |
|
||||||| |||||| || |||||||||||||| || || |||||| || ||||||||| ||||| | |||||| |||||||||| |||||| |||||| |
|
|
| T |
3957152 |
attgagagcataccgtcgagcatcaagaatctcacaagactaagaaaattagacatacgattttgctcaaagcttgtggctctacccgagcttccttcat |
3957251 |
T |
 |
| Q |
299 |
cagttgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaa |
383 |
Q |
| |
|
||||||||| |||||||||||| ||||| ||| | ||||||||||| ||||||| | |||||| ||||||| ||||||||||| |
|
|
| T |
3957252 |
cagttgaaactctacttgttgaatgtgaatcattgaagactgtatttttccctt---ctgttgctcaacaattcaaggaaaacaa |
3957333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 4023596 - 4023432
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
||||||| |||||||||||||||| |||||||| ||| |||| ||| | | ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4023596 |
catcatcttttggatgtcaaagcaggctagaaatactggttttaagatacagtgaaattgagagcataccttcaagcatcaagaatcttacaagactaag |
4023497 |
T |
 |
| Q |
111 |
aaagttacacataggcggttgctcaaagattctggctctacccgaccttcctgtatcagttgaaa |
175 |
Q |
| |
|
||| ||| ||||| | |||||||||| | |||| ||||||||| |||||| ||||||||||| |
|
|
| T |
4023496 |
aaaattagacatacgattttgctcaaagctcctggttctacccgagcttccttcatcagttgaaa |
4023432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 3921635 - 3921747
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
3921635 |
catcatcttttggatgtcaaagcaatctagaaaccctgaatttaagtgacactgaaattgagagcatacattcaagcatcaagaatcttacaagactaag |
3921734 |
T |
 |
| Q |
111 |
aaagttacacata |
123 |
Q |
| |
|
||| ||| ||||| |
|
|
| T |
3921735 |
aaaattatacata |
3921747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 3957096 - 3957260
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
||||||| ||||||| || | |||||||||||| |||| |||||| || ||| ||||||||||||||| || ||||||||| |||| ||||||||||| |
|
|
| T |
3957096 |
catcatcttttggatttctaggcaagctagaaatcctggatttagtattcactgcaattgagagcataccgtcgagcatcaagaatctcacaagactaag |
3957195 |
T |
 |
| Q |
111 |
aaagttacacataggcggttgctcaaagattctggctctacccgaccttcctgtatcagttgaaa |
175 |
Q |
| |
|
||| ||| ||||| | |||||||||| || ||||||||||||| |||||| ||||||||||| |
|
|
| T |
3957196 |
aaaattagacatacgattttgctcaaagcttgtggctctacccgagcttccttcatcagttgaaa |
3957260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 3816137 - 3815973
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
||||||| |||||||||||||| |||||||||| ||| |||| ||| | | | ||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3816137 |
catcatcttttggatgtcaaagaaagctagaaatactggttttaagatacagtgatattgagatcataccttcaagcatcaagaatcttacaagactaag |
3816038 |
T |
 |
| Q |
111 |
aaagttacacataggcggttgctcaaagattctggctctacccgaccttcctgtatcagttgaaa |
175 |
Q |
| |
|
||| || ||||| | ||||||| ||| || ||||| ||||||| |||||| ||||||||||| |
|
|
| T |
3816037 |
aaaactagacatacgaggttgcttgaagcttgtggctttacccgagcttccttcatcagttgaaa |
3815973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 4000680 - 4000516
Alignment:
| Q |
11 |
catcatcatttggatgtcaaagcaagctagaaaccctgaatttaggatggactaaaattgagagcataccttcaagcatcaaggatcttacaagactaag |
110 |
Q |
| |
|
|||||| |||| |||||||||||||||| |||| |||| |||| || || | ||||||||| ||||||||| |||||| || |||||||||||||||| |
|
|
| T |
4000680 |
catcattatttagatgtcaaagcaagcttgaaatcctggttttaagaaagagtgaaattgagatcataccttctagcatccagaatcttacaagactaag |
4000581 |
T |
 |
| Q |
111 |
aaagttacacataggcggttgctcaaagattctggctctacccgaccttcctgtatcagttgaaa |
175 |
Q |
| |
|
||| ||| ||||| | ||||| |||| ||||||||||||| | |||||| |||||||||||| |
|
|
| T |
4000580 |
aaaattagacatacgatattgcttaaagcttctggctctacctgtgcttcctttatcagttgaaa |
4000516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 388
Target Start/End: Complemental strand, 3800230 - 3800145
Alignment:
| Q |
303 |
tgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaa |
388 |
Q |
| |
|
||||| |||||||||| ||| | | ||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
3800230 |
tgaaactctacttgttcactataagtcactgaatgctgtattgttcccttcaacagttgctggacaattaaaggaaaacaagaaaa |
3800145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 388
Target Start/End: Complemental strand, 4217203 - 4217118
Alignment:
| Q |
303 |
tgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaa |
388 |
Q |
| |
|
||||| |||||||||| ||| | | ||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
4217203 |
tgaaactctacttgttcactataagtcactgaatgctgtattgttcccttcaacagttgctggacaattaaaggaaaacaagaaaa |
4217118 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 393
Target Start/End: Complemental strand, 4008314 - 4008188
Alignment:
| Q |
267 |
caagcttctggctctacctgagctttcttcatcagttgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaa |
366 |
Q |
| |
|
|||||||| | || |||| |||||| | |||||| |||||| |||| | | ||| ||||| ||||| |||||||||| |||||||| ||| | | ||||| |
|
|
| T |
4008314 |
caagcttcggactataccagagcttccatcatcacttgaaactctattggctgaatgtgaatcactgaagactgtatggttccctttaacagcttctgaa |
4008215 |
T |
 |
| Q |
367 |
caattaaaggaaaacaagaaaagggtt |
393 |
Q |
| |
|
|| || ||||||||||||||||||||| |
|
|
| T |
4008214 |
cagttcaaggaaaacaagaaaagggtt |
4008188 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 3936823 - 3936864
Alignment:
| Q |
342 |
attgttcccttcaaccgttgctgaacaattaaaggaaaacaa |
383 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
3936823 |
attgttcccttcaacagttgctgaacaattaaaggaaaacaa |
3936864 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 4016684 - 4016623
Alignment:
| Q |
329 |
cactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaagggtt |
393 |
Q |
| |
|
|||| |||||||| ||||||||||||| ||||||||||||| ||||| |||| |||||||||| |
|
|
| T |
4016684 |
cactgaagactgtgttgttcccttcaa---ttgctgaacaattcaaggagaacaggaaaagggtt |
4016623 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 390
Target Start/End: Complemental strand, 13396310 - 13396119
Alignment:
| Q |
199 |
attgagatcataccttcaagcatcaagaatcttacgaggctaagagaactagacatacaattttccaacaagcttctggctctacctgagctttcttcat |
298 |
Q |
| |
|
||||||| |||||||||||||||| |||||||| | | ||||| ||||||||||||||| | | |||||||||||| |||||| |||| |||||| |
|
|
| T |
13396310 |
attgagagtataccttcaagcatcatcaatcttacacgacgaagagtactagacatacaattctgctcaaagcttctggctgtacctgtgcttccttcat |
13396211 |
T |
 |
| Q |
299 |
cagttgaaattctacttgttgactgtgactcactaaagactgtattgttcccttcaaccgttgctgaacaattaaaggaaaacaagaaaagg |
390 |
Q |
| |
|
|| |||||| |||| ||||||| ||| | ||||| ||| ||||| |||||||||||| ||| | |||||||| |||||||||||||||||| |
|
|
| T |
13396210 |
cacttgaaactctaattgttgaatgtaagtcactgaagtctgtagtgttcccttcaaaagttaccgaacaattcaaggaaaacaagaaaagg |
13396119 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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