View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6118_high_20 (Length: 252)
Name: NF6118_high_20
Description: NF6118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6118_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 15450646 - 15450864
Alignment:
| Q |
24 |
aattccatcctagttcccttcttggatctcttcataagttcgtgacaatgttgttggatggtaggaattatggataaaattatttaaaccaatcagtaaa |
123 |
Q |
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| T |
15450646 |
aattccatcctagttcccttcttggatctcttcataagttcgtgacaatgttgtttgatgttaggaattatggataaaattatttaaaccaatcagtaaa |
15450745 |
T |
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| Q |
124 |
ctttaattaaggggaggtatctggttgatggagtggtcgttgttatgaattcattgacctggctcaaaattctaggagggtgtatctgatttttaaggtg |
223 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
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| T |
15450746 |
ctttaattagggggaggtatctggttgatggagtggtcgttgttctgaattcattgacctggctcgaaattctaggagggtgtatatgatttttaaggtg |
15450845 |
T |
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| Q |
224 |
gaatgcgaaaaggcctatg |
242 |
Q |
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|||| |||||||||||||| |
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| T |
15450846 |
gaattcgaaaaggcctatg |
15450864 |
T |
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