View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6118_high_9 (Length: 378)

Name: NF6118_high_9
Description: NF6118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6118_high_9
NF6118_high_9
[»] chr4 (21 HSPs)
chr4 (13-171)||(49031776-49031934)
chr4 (205-293)||(10172125-10172213)
chr4 (205-298)||(7367973-7368066)
chr4 (250-326)||(7730630-7730706)
chr4 (247-294)||(6987702-6987749)
chr4 (248-295)||(27123314-27123361)
chr4 (248-290)||(21043197-21043239)
chr4 (246-294)||(23819151-23819199)
chr4 (247-287)||(25904183-25904223)
chr4 (250-325)||(8147899-8147974)
chr4 (300-378)||(24929449-24929525)
chr4 (239-294)||(25583654-25583709)
chr4 (248-294)||(25896846-25896892)
chr4 (248-293)||(4798528-4798573)
chr4 (245-294)||(8074825-8074874)
chr4 (239-288)||(18628506-18628555)
chr4 (248-288)||(4071946-4071986)
chr4 (238-294)||(11264363-11264419)
chr4 (247-291)||(13126536-13126580)
chr4 (250-294)||(19429476-19429520)
chr4 (239-291)||(21157833-21157885)
[»] chr5 (18 HSPs)
chr5 (248-375)||(38047841-38047966)
chr5 (238-291)||(28586718-28586771)
chr5 (239-327)||(11095448-11095536)
chr5 (248-294)||(11457160-11457206)
chr5 (248-293)||(13781837-13781882)
chr5 (238-298)||(4273329-4273389)
chr5 (238-294)||(32172715-32172771)
chr5 (247-298)||(7674706-7674757)
chr5 (247-290)||(16457939-16457982)
chr5 (247-298)||(17369400-17369451)
chr5 (256-323)||(40499696-40499763)
chr5 (248-294)||(10907440-10907486)
chr5 (251-293)||(35095751-35095793)
chr5 (256-294)||(36774677-36774715)
chr5 (265-298)||(18700442-18700475)
chr5 (248-293)||(28982073-28982118)
chr5 (248-289)||(40335835-40335876)
chr5 (238-294)||(11297148-11297204)
[»] chr2 (21 HSPs)
chr2 (249-376)||(28803493-28803618)
chr2 (237-333)||(1318259-1318355)
chr2 (238-293)||(5902501-5902556)
chr2 (248-294)||(5759537-5759582)
chr2 (257-300)||(1830101-1830144)
chr2 (254-293)||(4550810-4550849)
chr2 (265-324)||(6561369-6561428)
chr2 (247-290)||(7035527-7035570)
chr2 (238-293)||(15120246-15120301)
chr2 (247-290)||(24100995-24101038)
chr2 (250-293)||(27237857-27237900)
chr2 (251-293)||(1741997-1742039)
chr2 (250-292)||(10567121-10567163)
chr2 (252-294)||(11063550-11063592)
chr2 (248-294)||(32837385-32837431)
chr2 (248-298)||(37034080-37034130)
chr2 (248-289)||(37297497-37297538)
chr2 (256-325)||(40776067-40776136)
chr2 (238-294)||(787394-787450)
chr2 (239-291)||(19629426-19629478)
chr2 (239-291)||(19826327-19826379)
[»] chr1 (24 HSPs)
chr1 (218-298)||(4549473-4549553)
chr1 (239-294)||(32515394-32515449)
chr1 (239-298)||(15581312-15581371)
chr1 (248-293)||(38170652-38170697)
chr1 (247-290)||(2295163-2295206)
chr1 (248-294)||(23373275-23373321)
chr1 (249-291)||(37175887-37175929)
chr1 (247-289)||(38001663-38001705)
chr1 (239-293)||(40485726-40485780)
chr1 (238-288)||(41638260-41638310)
chr1 (239-293)||(43420321-43420375)
chr1 (253-294)||(15579544-15579585)
chr1 (265-294)||(27145983-27146012)
chr1 (245-294)||(28935835-28935884)
chr1 (250-287)||(35590857-35590894)
chr1 (232-293)||(43338179-43338240)
chr1 (240-284)||(781120-781164)
chr1 (247-291)||(7941672-7941716)
chr1 (246-286)||(9572060-9572100)
chr1 (247-291)||(10233608-10233652)
chr1 (238-294)||(12763385-12763441)
chr1 (250-302)||(23407485-23407537)
chr1 (238-286)||(43371843-43371891)
chr1 (235-299)||(49692001-49692065)
[»] chr8 (26 HSPs)
chr8 (238-293)||(11569409-11569464)
chr8 (238-293)||(30191093-30191148)
chr8 (238-333)||(34770891-34770986)
chr8 (240-298)||(12972916-12972974)
chr8 (238-288)||(24326099-24326149)
chr8 (237-294)||(14949928-14949985)
chr8 (238-294)||(6950384-6950440)
chr8 (246-294)||(30987951-30987999)
chr8 (249-293)||(40071812-40071856)
chr8 (251-298)||(7878492-7878538)
chr8 (251-294)||(26410342-26410385)
chr8 (239-302)||(26499770-26499833)
chr8 (247-290)||(26771332-26771375)
chr8 (251-334)||(43208121-43208204)
chr8 (248-294)||(8558722-8558768)
chr8 (248-294)||(21130674-21130720)
chr8 (240-294)||(39551163-39551217)
chr8 (267-325)||(44348493-44348551)
chr8 (257-294)||(9540967-9541004)
chr8 (265-298)||(26473731-26473764)
chr8 (265-298)||(30259172-30259205)
chr8 (256-325)||(45071405-45071474)
chr8 (238-286)||(7918733-7918781)
chr8 (249-333)||(10488486-10488570)
chr8 (248-280)||(29890842-29890874)
chr8 (251-323)||(43393737-43393809)
[»] chr6 (24 HSPs)
chr6 (248-294)||(32917259-32917305)
chr6 (251-300)||(33498675-33498724)
chr6 (248-295)||(2460113-2460160)
chr6 (248-291)||(32976043-32976086)
chr6 (239-294)||(34939806-34939861)
chr6 (248-298)||(281810-281860)
chr6 (250-323)||(7149461-7149534)
chr6 (246-298)||(28776633-28776685)
chr6 (246-298)||(28798337-28798389)
chr6 (239-286)||(2455683-2455730)
chr6 (265-312)||(6310229-6310276)
chr6 (238-293)||(26559191-26559246)
chr6 (238-293)||(30863309-30863364)
chr6 (252-294)||(2027764-2027806)
chr6 (248-294)||(3738131-3738177)
chr6 (239-293)||(3775081-3775135)
chr6 (248-294)||(5731631-5731677)
chr6 (240-294)||(10616496-10616549)
chr6 (248-294)||(33385591-33385637)
chr6 (239-288)||(2732200-2732249)
chr6 (239-288)||(32171535-32171584)
chr6 (248-288)||(7446615-7446655)
chr6 (237-293)||(27595518-27595574)
chr6 (251-287)||(34404452-34404488)
[»] chr7 (26 HSPs)
chr7 (248-332)||(28340383-28340466)
chr7 (251-294)||(12834927-12834970)
chr7 (251-298)||(25422384-25422431)
chr7 (248-327)||(29574587-29574666)
chr7 (248-294)||(39345533-39345579)
chr7 (245-294)||(48157079-48157128)
chr7 (258-298)||(753179-753219)
chr7 (250-294)||(39334255-39334299)
chr7 (238-293)||(20553166-20553221)
chr7 (267-298)||(30134107-30134138)
chr7 (239-290)||(31751712-31751763)
chr7 (248-298)||(33645922-33645973)
chr7 (239-294)||(33894689-33894744)
chr7 (248-294)||(22388454-22388500)
chr7 (248-294)||(27626085-27626131)
chr7 (248-294)||(33933854-33933900)
chr7 (239-293)||(36598309-36598363)
chr7 (238-291)||(1431945-1431998)
chr7 (310-374)||(11208409-11208471)
chr7 (249-298)||(12234852-12234901)
chr7 (249-298)||(22387859-22387908)
chr7 (252-293)||(28727729-28727770)
chr7 (250-291)||(39360088-39360129)
chr7 (246-291)||(41040230-41040275)
chr7 (248-293)||(45859489-45859534)
chr7 (248-296)||(33939348-33939396)
[»] chr3 (20 HSPs)
chr3 (250-290)||(30443960-30444000)
chr3 (250-294)||(37273196-37273240)
chr3 (239-333)||(21872248-21872342)
chr3 (248-294)||(24624272-24624318)
chr3 (248-293)||(2100141-2100186)
chr3 (237-325)||(48816429-48816517)
chr3 (239-294)||(43115118-43115173)
chr3 (248-294)||(659822-659868)
chr3 (240-294)||(8933849-8933903)
chr3 (248-294)||(11039301-11039347)
chr3 (237-291)||(20194984-20195038)
chr3 (251-293)||(21574553-21574595)
chr3 (248-298)||(30923861-30923910)
chr3 (249-294)||(26603255-26603300)
chr3 (247-291)||(21367733-21367777)
chr3 (247-291)||(22203496-22203539)
chr3 (248-292)||(27290863-27290907)
chr3 (248-280)||(35971983-35972015)
chr3 (239-291)||(45535173-45535225)
chr3 (250-294)||(49772632-49772676)
[»] scaffold0024 (1 HSPs)
scaffold0024 (251-298)||(27634-27681)
[»] scaffold0032 (1 HSPs)
scaffold0032 (245-303)||(42681-42739)
[»] scaffold0428 (1 HSPs)
scaffold0428 (248-294)||(3968-4014)
[»] scaffold0057 (1 HSPs)
scaffold0057 (247-291)||(24687-24731)


Alignment Details
Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 49031776 - 49031934
Alignment:
Q  13 aagaatatcaacaaaatgtaaagaacctaccaaatggtttgtggaaggagatacttgaaggccttagttttgttgaaaatgaaatggaggcctttcttgg 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||    
T  49031776 aagaatatcaagaaaatgtaaagaacctaccaaatggtttgtgggaggagatacttgaaggccttaattttgtgcaaaatgaaatgggggcctttcttgg 49031875  T
Q  113 gaatccttcaaaacctctcctcctctctgtgcgctctggtgctgcggtaaaagcctttt 171  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||    
T  49031876 gaatccttcaaaacctctcctcgtctctgttcgctctggtgctgctgtaagagcctttt 49031934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 293
Target Start/End: Complemental strand, 10172213 - 10172125
Alignment:
Q  205 tgtttggactgagttatttgagataacctaaatgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||||| ||| ||||||||| | | ||| |||||||| || |||||| |||||||| || |||||||||||||||||| ||||||||    
T  10172213 tgtttggattgatttatttgagcttatctatatgcataagcacttgtgaaactgtttgatatagcttatggaaacagcttgtgacatgt 10172125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 7367973 - 7368066
Alignment:
Q  205 tgtttggactgagttatttgagataacctaaatgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||| ||| ||||||||| | | ||| | |||||| |  |||||||||||||||| |||||| ||| |||||||||||||||||| ||||    
T  7367973 tgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttata 7368066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 7730706 - 7730630
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaa 326  Q
    |||||||| ||| | |||||||| ||||||| ||||||||||||| ||| |||||| || |||| ||||||||||||    
T  7730706 gtgagactattttggagagcttaaggaaacaacttatgacatgtccataagctctccaggatagcttatgaaaacaa 7730630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 6987702 - 6987749
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  6987702 tttgtgagactgtttgggagagcttatggatacaacttatgacatgtc 6987749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 27123314 - 27123361
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtct 295  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||    
T  27123314 ttgtgagactgtttgagagagcttatggaaacaacttatgacatgtct 27123361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 21043197 - 21043239
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  21043197 ttgtgagactgtttgggagaggttatggaaacagcttatgaca 21043239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 23819199 - 23819151
Alignment:
Q  246 atttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||||| |||| ||| | |||||||||||||||||||    
T  23819199 atttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtc 23819151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 25904183 - 25904223
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatg 287  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  25904183 tttgtgagactgtttgggagagcttatgaaaacagcttatg 25904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 8147974 - 8147899
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaaca 325  Q
    ||||| |||||| ||||||| |||| ||| | ||||||||||||| ||| | ||||||| |||| |||||||||||    
T  8147974 gtgaggctgtttcgtagagcatatgaaaataacttatgacatgtccataagttctctaggatagcttatgaaaaca 8147899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 378
Target Start/End: Complemental strand, 24929525 - 24929449
Alignment:
Q  300 gctctctagaatagtttatgaaaacaacatatagtttttatttgaaaaaagtttctgtttattttatcttttgttatag 378  Q
    ||||||||| | |||||||||||||||| ||||| |||||  |||||| ||||    ||||||||||||||||||||||    
T  24929525 gctctctagtagagtttatgaaaacaacttatagctttta--tgaaaacagttagactttattttatcttttgttatag 24929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 25583709 - 25583654
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||| ||| ||||||||||||||| || ||||||| ||||| |||||||||||||    
T  25583709 cataaacatgtgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtc 25583654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 25896892 - 25896846
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||| | ||||||||| |||| |||||||||||||||    
T  25896892 ttgtgagactgtttaggagagcttatagaaatagcttatgacatgtc 25896846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 4798528 - 4798573
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||||||||| || ||||||||||||||| |||| ||||||||    
T  4798528 ttgtgagactgttaggaagagcttatggaaacggcttctgacatgt 4798573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 8074874 - 8074825
Alignment:
Q  245 catttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||| |||||    
T  8074874 catttgtgagactgtttgagagagcttatagaaacagctaatgaaatgtc 8074825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 18628506 - 18628555
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatga 288  Q
    ||||| || |||||||||||||||| |||||||||| ||||| |||||||    
T  18628506 cataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 4071986 - 4071946
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatga 288  Q
    |||||||||||||||  |||||||||| |||||||||||||    
T  4071986 ttgtgagactgtttgagagagcttatgaaaacagcttatga 4071946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 11264419 - 11264363
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||| ||| ||||||||||||||| ||||| ||| ||| || |||||||||||||    
T  11264419 gcataaacatctgtgagactgtttgggagagcatatagaatcaacttatgacatgtc 11264363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 13126536 - 13126580
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||||||||||| ||| |||||  ||||||||||||||||    
T  13126536 tttgtgagactgtttggaagaacttataaaaacagcttatgacat 13126580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 19429476 - 19429520
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||| |||||||||||| | | |||||||||||||    
T  19429476 gtgagactgtttgggagagcttatggagaaaacttatgacatgtc 19429520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 21157885 - 21157833
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||| || |||| ||||||||||| ||||||||  |||||||||||||||||    
T  21157885 cataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacat 21157833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 38047841 - 38047966
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatatagtttttatttgaaaa 347  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||| ||| |||||| || |||| ||||||||||| |||||||  | ||| ||||||    
T  38047841 ttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataagctctccaggatagcttatgaaaacagcatatag--tatatatgaaaa 38047938  T
Q  348 aagtttctgtttattttatcttttgtta 375  Q
     | |||   |||||||||||||||||||    
T  38047939 taatttgactttattttatcttttgtta 38047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 28586718 - 28586771
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    |||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  28586718 gcataagcatttgtgaaactgtttgggagagcttatggaaatagcttatgacat 28586771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 11095448 - 11095536
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaac 327  Q
    ||||| || |||||| | ||||||  ||| ||| |||||||||||||||||||||| ||| | |||| ||||||| |||||||||||||    
T  11095448 cataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataagttctccagaatagcttatgaaaacaac 11095536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 11457206 - 11457160
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||| | |||||||||||||||| |||||||||||||    
T  11457206 ttgtgagactgttttgaagagcttatggaaacaacttatgacatgtc 11457160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 13781837 - 13781882
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||    
T  13781837 ttgtgagactgtttggtagagcttgtagaaatagcttatgacatgt 13781882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 4273329 - 4273389
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||| ||||||||||| ||||||  ||| | ||||||||||||||||||| ||||||||    
T  4273329 gcataaacatttgtgagattgtttgagagaacctatggaaacagcttatgacttgtctata 4273389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 32172771 - 32172715
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||| || ||||||||  |||||| |||||||||||||||| |||||||||||||    
T  32172771 gcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtc 32172715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 7674757 - 7674706
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||||| |||| ||| |||||||||||| |||||||||||| ||||    
T  7674757 tttgtgagactgcttggaagaacttatggaaacaacttatgacatgtttata 7674706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 16457939 - 16457982
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||    
T  16457939 tttgtgagactgtttgggagaacttatgaaaacagcttatgaca 16457982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 17369400 - 17369451
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||| ||||| ||| |||| | |||||||||||||||||||||||||    
T  17369400 tttgtgagagtgtttagtatagctcacggaaacagcttatgacatgtctata 17369451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 40499696 - 40499763
Alignment:
Q  256 ctgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaa 323  Q
    |||||| | |||||||||||||||| ||||||||||||| ||| |||||| |  |||||||| |||||    
T  40499696 ctgtttaggagagcttatggaaacaacttatgacatgtccataagctctccaagatagtttacgaaaa 40499763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 10907486 - 10907440
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||| |||||||||| ||||| |||||| ||||||    
T  10907486 ttgtgagactgtttggaagagcttatgaaaacaacttatgtcatgtc 10907440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 35095751 - 35095793
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||||||||| |||||||||||||| | ||||||||||||    
T  35095751 tgagactgtttggaagagcttatggaaatatcttatgacatgt 35095793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 36774677 - 36774715
Alignment:
Q  256 ctgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  36774677 ctgtttggaagagcttatggaaacggcttatgacatgtc 36774715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Complemental strand, 18700475 - 18700442
Alignment:
Q  265 agagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||||||||| |||||||||||||||||    
T  18700475 agagcttatggaaacaacttatgacatgtctata 18700442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 28982118 - 28982073
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||||||||||||| | |||||||||||| || |||||||||||    
T  28982118 ttgtgagactgtttggaaaagcttatggaaagagattatgacatgt 28982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 40335835 - 40335876
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgac 289  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||    
T  40335835 ttgtgagactgtttggtagagtttatggaaagagcttgtgac 40335876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 11297148 - 11297204
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||| || |||| ||||||||||  |||||||||||||||| |||| ||||||||    
T  11297148 gcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtc 11297204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 376
Target Start/End: Original strand, 28803493 - 28803618
Alignment:
Q  249 tgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatatagtttttatttgaaaaa 348  Q
    ||||||||||||||  ||| | |||||||||| ||||||||||||| ||| |||||| || |||||||| ||||||||| | |||   |||| |||||      
T  28803493 tgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataagctctccaggatagtttaagaaaacaacttgtag--cttatatgaaatc 28803590  T
Q  349 agtttctgtttattttatcttttgttat 376  Q
    |||||   ||||||||||||||||||||    
T  28803591 agtttgactttattttatcttttgttat 28803618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 1318355 - 1318259
Alignment:
Q  237 tgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatatag 333  Q
    ||||||| || |||||||||||||||  |||||||||| ||||| ||||||||||||| | | ||||||||| || | || |||||| ||| |||||    
T  1318355 tgcataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtccagaagctctctaggatggcttgtgaaaataacttatag 1318259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 5902501 - 5902556
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||| || |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  5902501 gcataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgt 5902556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 5759537 - 5759582
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  5759537 ttgtgagactgtttgggagagcttatggaaacagctta-gacatgtc 5759582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 1830144 - 1830101
Alignment:
Q  257 tgtttggtagagcttatggaaacagcttatgacatgtctatagg 300  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||    
T  1830144 tgtttgggagagcttatggaaacatcttatgacatgtccatagg 1830101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 4550849 - 4550810
Alignment:
Q  254 gactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatgt 4550810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 6561428 - 6561369
Alignment:
Q  265 agagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaac 324  Q
    |||||||||||||||| |||||||||| |||||| |||||| || |||| || |||||||    
T  6561428 agagcttatggaaacaacttatgacatatctataagctctccaggatagcttctgaaaac 6561369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 7035527 - 7035570
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
T  7035527 tttgtgagactgttttgaagaacttatggaaacagcttatgaca 7035570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 15120301 - 15120246
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||| || ||||||  |||||||| |||||||||||||||| ||||||||||||    
T  15120301 gcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgt 15120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 24101038 - 24100995
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||    
T  24101038 tttgtgagactgtttgggagaacttatggaaacaccttatgaca 24100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 27237857 - 27237900
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  27237857 gtgaaactgtttggtagaacttatagaaacagcttatgacatgt 27237900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 1741997 - 1742039
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||    
T  1741997 tgagactatttgggagagcttatggaaacaacttatgacatgt 1742039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 10567163 - 10567121
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatg 292  Q
    |||||||||||||| |||| || ||||||||||||||||||||    
T  10567163 gtgagactgtttgggagagattgtggaaacagcttatgacatg 10567121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 11063592 - 11063550
Alignment:
Q  252 gagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||| ||||||||||||||||  ||||||||||||    
T  11063592 gagactgtttggaagagcttatggaaacatattatgacatgtc 11063550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 32837431 - 32837385
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||| ||| |||||| ||||||||||| |||||||    
T  32837431 ttgtgagactgtttgggagaacttatgaaaacagcttataacatgtc 32837385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 37034130 - 37034080
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||| |||| ||||| |||||||||||||||| ||||||| ||||    
T  37034130 ttgtgagactatttgttagagattatggaaacagcttaagacatgtttata 37034080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 37297497 - 37297538
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgac 289  Q
    |||||||||  ||||| |||||||||||||||||||||||||    
T  37297497 ttgtgagaccatttggaagagcttatggaaacagcttatgac 37297538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 40776067 - 40776136
Alignment:
Q  256 ctgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaaca 325  Q
    |||||||| ||| |||||| |||||||||||||||| |  ||| ||||||  |||||| |||||||||||    
T  40776067 ctgtttggaagaacttatgaaaacagcttatgacatatgcataagctctccggaatagattatgaaaaca 40776136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 787450 - 787394
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||| || |||||| ||||||||  ||| |||||| |||||||||||||||||||    
T  787450 gcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtc 787394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 19629478 - 19629426
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||| ||||| ||||    
T  19629478 cataaccatctgtgagactatttgggagaacttatggaaacaacttataacat 19629426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 19826379 - 19826327
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||| ||||| ||||    
T  19826379 cataaccatctgtgagactatttgggagaacttatggaaacaacttataacat 19826327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 4549473 - 4549553
Alignment:
Q  218 ttatttgagataacctaaatgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||| | |||   |||||| ||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  4549473 ttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctata 4549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 32515394 - 32515449
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||| || |||||||||||||||| |||||||||||||||||| |||||||||||    
T  32515394 cataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtc 32515449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 15581371 - 15581312
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||| || |||||||| ||||||| |||||| ||||||||| |||||||||||||||||    
T  15581371 cataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctata 15581312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 38170652 - 38170697
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||    
T  38170652 ttgtgagactgcttgggagagcttatgaaaacagcttatgacatgt 38170697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 2295206 - 2295163
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||    
T  2295206 tttgtgagactgtttgggagaacttatgaaaacagcttatgaca 2295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 23373275 - 23373321
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||| ||||||| ||||||||| |||||| |||||||||||||    
T  23373275 ttgtgagattgtttgggagagcttatagaaacaacttatgacatgtc 23373321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 37175887 - 37175929
Alignment:
Q  249 tgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||||||| | |||||||||||||||| ||||||||||    
T  37175887 tgtgagactgtttagaagagcttatggaaacaacttatgacat 37175929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 38001705 - 38001663
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgac 289  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||    
T  38001705 tttgtgagactgtttgggagaacttatgaaaacagcttatgac 38001663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 40485726 - 40485780
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||| || |||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  40485726 cataagcacttgtgagactgtttgggagaacttattgaaacatcttatgacatgt 40485780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 41638260 - 41638310
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatga 288  Q
    |||||| ||||||||||||||||||| |||| ||||| |||||| ||||||    
T  41638260 gcataagcatttgtgagactgtttgggagagattatgaaaacagtttatga 41638310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 43420375 - 43420321
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||| || ||||||||||| |||  ||| |||||||||||||||||||||||||    
T  43420375 cataaacacttgtgagactgcttgtgagatcttatggaaacagcttatgacatgt 43420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 15579585 - 15579544
Alignment:
Q  253 agactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||| ||||||| |||||||| |||||||||||||    
T  15579585 agactgtttgggagagcttgtggaaacaacttatgacatgtc 15579544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Complemental strand, 27146012 - 27145983
Alignment:
Q  265 agagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||||||||||||||||||||||    
T  27146012 agagcttatggaaacagcttatgacatgtc 27145983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 28935835 - 28935884
Alignment:
Q  245 catttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||||||||||| ||||||||| ||  ||| ||||||||||||    
T  28935835 catttgtgagactgtttgggagagcttatagagtcagtttatgacatgtc 28935884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 35590857 - 35590894
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatg 287  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  35590857 gtgaaactgtttggtagagcttatggaaacagcatatg 35590894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 43338240 - 43338179
Alignment:
Q  232 ctaaatgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||| ||||| ||||||| ||| | ||| | ||| |||||||||||||||||||||||||    
T  43338240 ctaaatccataagcatttgtaagattatttagaagaacttatggaaacagcttatgacatgt 43338179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 781120 - 781164
Alignment:
Q  240 ataaccatttgtgagactgtttggtagagcttatggaaacagctt 284  Q
    |||| ||||||||||| ||||| | ||||||||||||||||||||    
T  781120 ataagcatttgtgagattgttttggagagcttatggaaacagctt 781164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 7941716 - 7941672
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||||||||||| |||  ||||| ||||||||||||||||    
T  7941716 tttgtgagactgtttggaagaatttatgaaaacagcttatgacat 7941672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 9572060 - 9572100
Alignment:
Q  246 atttgtgagactgtttggtagagcttatggaaacagcttat 286  Q
    |||||||||||||||||| ||| |||||| |||||||||||    
T  9572060 atttgtgagactgtttgggagaacttatgaaaacagcttat 9572100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 10233608 - 10233652
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  10233608 tttgtaagactgtttggaagaacttatgaaaacagcttatgacat 10233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 12763441 - 12763385
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||| ||||||| ||||||||| | ||| |||| | |||||||||||||||||||    
T  12763441 gcataagcatttgtaagactgttttggagaacttacgaaaacagcttatgacatgtc 12763385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 23407537 - 23407485
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggct 302  Q
    |||||||||| ||  ||||||||| |||| ||||||||||||||| |||||||    
T  23407537 gtgagactgtctgagagagcttattgaaatagcttatgacatgtccataggct 23407485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 43371843 - 43371891
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttat 286  Q
    |||||| || |||||||||||||||  |||||||||| |||||||||||    
T  43371843 gcataagcacttgtgagactgtttgagagagcttatgaaaacagcttat 43371891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 49692001 - 49692065
Alignment:
Q  235 aatgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctatag 299  Q
    |||||||||  | |||||||||||||||  ||| |||||| ||| ||||||||||||||| ||||    
T  49692001 aatgcataagaacttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccatag 49692065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 11569409 - 11569464
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||||| ||||||||||||||   |||||||||||||||||||||||||||||    
T  11569409 gcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgt 11569464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 30191093 - 30191148
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||| || |||| ||||||||||| |||||||||||||||| ||||||||||||    
T  30191093 gcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgt 30191148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 333
Target Start/End: Complemental strand, 34770986 - 34770891
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatatag 333  Q
    |||||| || |||||| ||||||||  ||| | |||| ||||||||||||||||||| ||   |||||||| |||| ||||||||||||| |||||    
T  34770986 gcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgtccatgaactctctaggatagcttatgaaaacaacttatag 34770891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 12972974 - 12972916
Alignment:
Q  240 ataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||| ||||||||||||||||||| |||  ||||| |||||||||||||||| ||||||    
T  12972974 ataagcatttgtgagactgtttgggagatattatgaaaacagcttatgacatatctata 12972916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 24326149 - 24326099
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatga 288  Q
    |||||| || |||||||||||||||| ||||||||||||||||| ||||||    
T  24326149 gcataagcacttgtgagactgtttgggagagcttatggaaacagtttatga 24326099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 14949985 - 14949928
Alignment:
Q  237 tgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||| ||||||||||||||||| | |||||||||| ||| | |||||||||||||    
T  14949985 tgcataaacatttgtgagactgtttaggagagcttatgaaaataacttatgacatgtc 14949928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 6950440 - 6950384
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||| ||||||||||| ||||||| |||||||||| ||||| | |||||||||||    
T  6950440 gcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtc 6950384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 30987951 - 30987999
Alignment:
Q  246 atttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||| |||||||  |||||||||||||||| |||||||||||||    
T  30987951 atttgtgagtctgtttgagagagcttatggaaacaacttatgacatgtc 30987999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 40071856 - 40071812
Alignment:
Q  249 tgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||    
T  40071856 tgtgagagtgtttgggagagcttatggaaacaacttatgacatgt 40071812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 7878492 - 7878538
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  7878492 tgagactgtttgggagagcttatagaa-cagcttatgacatgtctata 7878538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 26410385 - 26410342
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||    
T  26410385 tgagactgcttgggagagcttatggaaacagctcatgacatgtc 26410342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 26499833 - 26499770
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggct 302  Q
    ||||| || |||||||||| ||| |||||| ||||| |||||||||||| || |||||||||||    
T  26499833 cataagcacttgtgagactattttgtagaggttatgaaaacagcttatggcacgtctataggct 26499770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 26771375 - 26771332
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||    
T  26771375 tttgtgagactgtttgggagaacttatgaaaacagcttatgaca 26771332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 43208121 - 43208204
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatatagt 334  Q
    ||||||||||||  |||||||||  |||||||||| |||| ||| ||| ||||||||| |||  ||||| ||||||| ||||||    
T  43208121 tgagactgtttgaaagagcttataaaaacagcttacgacaagtcgataagctctctagtataacttatgcaaacaacttatagt 43208204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 8558768 - 8558722
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||| |||||||| |||||||||||||||| ||| |||||||||    
T  8558768 ttgtgaggctgtttgggagagcttatggaaacaacttgtgacatgtc 8558722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 21130720 - 21130674
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||  |||||||||||||| ||||| |||||||||    
T  21130720 ttgtgagactgtttgagagagcttatggaaatagcttttgacatgtc 21130674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 39551163 - 39551217
Alignment:
Q  240 ataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||| ||||||||| ||||||||| |||  ||||||||||| |||||||||||||    
T  39551163 ataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtc 39551217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 44348551 - 44348493
Alignment:
Q  267 agcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaaca 325  Q
    |||||||||||||| |||||||| |||||||   ||||||| |||||||||| ||||||    
T  44348551 agcttatggaaacaacttatgacttgtctatgaactctctataatagtttataaaaaca 44348493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 9540967 - 9541004
Alignment:
Q  257 tgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtc 9541004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Original strand, 26473731 - 26473764
Alignment:
Q  265 agagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||| |||||||||||||||||||||||    
T  26473731 agagcttatgaaaacagcttatgacatgtctata 26473764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Complemental strand, 30259205 - 30259172
Alignment:
Q  265 agagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||||||||||||||||| |||||||||    
T  30259205 agagcttatggaaacagcttatgatatgtctata 30259172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 45071474 - 45071405
Alignment:
Q  256 ctgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaaca 325  Q
    |||||| | |||||||||| ||||| ||||||||||||||||| |||||  |||| |||| || ||||||    
T  45071474 ctgtttcggagagcttatgaaaacaacttatgacatgtctataagctcttcagaacagttcataaaaaca 45071405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 7918733 - 7918781
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttat 286  Q
    |||||| || |||||||||||||||| |||||||||| ||||| |||||    
T  7918733 gcataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 10488570 - 10488486
Alignment:
Q  249 tgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatatag 333  Q
    |||||||||||| || ||||| ||  ||||||||||||| |||| | ||| |||| | || |||||||||||||| ||| |||||    
T  10488570 tgtgagactgttcggaagagcatacagaaacagcttatggcatgaccataagctcaccaggatagtttatgaaaaaaacttatag 10488486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 29890842 - 29890874
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaaca 280  Q
    ||||||||||||||||||||| |||||||||||    
T  29890842 ttgtgagactgtttggtagagtttatggaaaca 29890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 43393737 - 43393809
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaa 323  Q
    ||||||||||||| ||||||||| || ||| |||||||||||   ||| |||||| | ||||| |||||||||    
T  43393737 tgagactgtttgggagagcttatagatacaacttatgacatgagcataagctctccataatagcttatgaaaa 43393809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 32917305 - 32917259
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
T  32917305 ttgtgagactgtttgggagagcttatggaaacaacttatgacatgtc 32917259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 33498724 - 33498675
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtctatagg 300  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  33498724 tgagactttttggtagagcttatgaaaacaacttatgacatgtctatagg 33498675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 2460113 - 2460160
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtct 295  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||    
T  2460113 ttgtgagactgtttgagagagcttatggaaacaacttatgacatgtct 2460160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 32976086 - 32976043
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  32976086 ttgtgagactgtttggaagagcttatagaaacagcttatgacat 32976043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 34939861 - 34939806
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||| ||||||||| ||||||| | |||||||| |||||||||||||||||||||    
T  34939861 cataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtc 34939806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 281810 - 281860
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||||||||| |||||| |||||| || |||||||||||||||||    
T  281810 ttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctata 281860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 7149461 - 7149534
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaa 323  Q
    ||||||||  |||| |||||||||||||| ||||| | | ||||||||| |||||| || ||||||||||||||    
T  7149461 gtgagactacttggaagagcttatggaaaaagcttgtcaaatgtctataagctctccaggatagtttatgaaaa 7149534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 28776685 - 28776633
Alignment:
Q  246 atttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||||| ||||| |||| ||| |||||||||||||||| ||||||||    
T  28776685 atttgtgagactatttgggagagtttaaggaaacagcttatgacttgtctata 28776633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 28798389 - 28798337
Alignment:
Q  246 atttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||||| ||||| |||| ||| |||||||||||||||| ||||||||    
T  28798389 atttgtgagactatttgggagagtttaaggaaacagcttatgacttgtctata 28798337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 2455730 - 2455683
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttat 286  Q
    ||||| ||||||||||||||||||  |||||||||||||||| |||||    
T  2455730 cataagcatttgtgagactgtttgaaagagcttatggaaacaacttat 2455683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 6310229 - 6310276
Alignment:
Q  265 agagcttatggaaacagcttatgacatgtctataggctctctagaata 312  Q
    |||||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  6310229 agagcttatgaaaacaacttatgacatgtctataagctctttagaata 6310276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 26559191 - 26559246
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||| ||||||||||||||||||| ||| |||||| ||||| ||||||| ||||    
T  26559191 gcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatgatatgt 26559246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 30863364 - 30863309
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||| || |||| ||||| |||||||||||||||| ||||| ||||||||||||    
T  30863364 gcataaacacttgttagactctttggtagagcttatgaaaacaacttatgacatgt 30863309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 2027764 - 2027806
Alignment:
Q  252 gagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||| ||||||||| |||||| |||||||||||||    
T  2027764 gagactgtttgggagagcttatagaaacaacttatgacatgtc 2027806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 3738177 - 3738131
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||  ||| ||| ||||||||||||||||||||||    
T  3738177 ttgtgagactgtttgaaagatcttgtggaaacagcttatgacatgtc 3738131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 3775081 - 3775135
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||| || |||||||||| || || ||||||||| |||||||||||||||||||    
T  3775081 cataaacacttgtgagactattcggaagagcttatagaaacagcttatgacatgt 3775135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 5731677 - 5731631
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||| |||||||||||||||||| ||| ||||||||| |||||    
T  5731677 ttgtgagagtgtttggtagagcttatgaaaatagcttatgatatgtc 5731631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 10616496 - 10616549
Alignment:
Q  240 ataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||| ||||||||| ||| ||||| |||||||||||||||| |||||||||||||    
T  10616496 ataagcatttgtga-actatttgggagagcttatggaaacaacttatgacatgtc 10616549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 33385637 - 33385591
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||| ||||||||| |||| |||||||||||||| ||||||||||    
T  33385637 ttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtc 33385591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 2732200 - 2732249
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatga 288  Q
    ||||| || |||||||||||||||| | ||||||||||||||||| ||||    
T  2732200 cataagcacttgtgagactgtttggaaaagcttatggaaacagctaatga 2732249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 32171584 - 32171535
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatga 288  Q
    ||||| |||||||||||||| |||| |||||||| ||||||| |||||||    
T  32171584 cataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 32171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 7446615 - 7446655
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatga 288  Q
    |||||||||||||||| ||| ||| ||||||||||||||||    
T  7446615 ttgtgagactgtttgggagaacttgtggaaacagcttatga 7446655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 27595518 - 27595574
Alignment:
Q  237 tgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||| || || ||||||||||||| |||  ||||||||||| ||||||||||||    
T  27595518 tgcataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgt 27595574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 34404488 - 34404452
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatg 287  Q
    ||||||||||||  |||||||||||||||||||||||    
T  34404488 tgagactgtttgaaagagcttatggaaacagcttatg 34404452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 28340383 - 28340466
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatata 332  Q
    ||||||||||||| || |||||||||| ||||| ||||||||||||| ||| |||||| || |||| || |||||||||| ||||    
T  28340383 ttgtgagactgttggg-agagcttatgaaaacaacttatgacatgtccataagctctccagcatagcttctgaaaacaacttata 28340466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 12834927 - 12834970
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  12834927 tgagactgattggtagagattatggaaacagcttatgacatgtc 12834970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 25422431 - 25422384
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  25422431 tgagactgtttgggagagcttatggaaacaccttatgacatgtttata 25422384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 29574587 - 29574666
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaac 327  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||| |||  ||||| |  ||||  ||||||||||||    
T  29574587 ttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccataacctctccatgatagcatatgaaaacaac 29574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 39345579 - 39345533
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||    
T  39345579 ttgtgagactgtttggtagagttcatggaaacagtttatgacatgtc 39345533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 48157079 - 48157128
Alignment:
Q  245 catttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||||||||||| ||||||||| |||||| |||||| ||||||    
T  48157079 catttgtgagactgtttgggagagcttatagaaacaacttatgccatgtc 48157128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 753179 - 753219
Alignment:
Q  258 gtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  753179 gtttggtagagcttatggaaatagcttatgacatatctata 753219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 39334299 - 39334255
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||    
T  39334299 gtgagactgtttggtagagtttatggaaacaatttatgacatgtc 39334255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 20553221 - 20553166
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||| || |||||||||||||  | ||||||||||||||||||||| |||||||    
T  20553221 gcataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgt 20553166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 298
Target Start/End: Complemental strand, 30134138 - 30134107
Alignment:
Q  267 agcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||||||||||||||||||||||||    
T  30134138 agcttatggaaacagcttatgacatgtctata 30134107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 31751712 - 31751763
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    ||||| |||||||||||||||||   |||||||||||||||| |||||||||    
T  31751712 cataagcatttgtgagactgtttataagagcttatggaaacaacttatgaca 31751763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 33645922 - 33645973
Alignment:
Q  248 ttgtgagactgtttggt-agagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||| ||||  |||||||||||||||| |||||||||||||||||    
T  33645922 ttgtgagactggttggagagagcttatggaaacaacttatgacatgtctata 33645973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 33894744 - 33894689
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||| || |||||||||||||||  |||||||||| ||||||| |||||||||||    
T  33894744 cataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtc 33894689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 22388454 - 22388500
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||||| |||||||||||| |||||| || |||||    
T  22388454 ttgtgagactgtttggtaaagcttatggaaatagcttaagatatgtc 22388500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 27626085 - 27626131
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||| ||||||  | ||||||||||||||||||||||||||||    
T  27626085 ttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtc 27626131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 33933900 - 33933854
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||| |||||||||||| | |||||||||| |||||||||||||||    
T  33933900 ttgtgcgactgtttggtaaaacttatggaaatagcttatgacatgtc 33933854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 36598309 - 36598363
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||| || |||||||| ||||||  |||||||||||||||| ||||||||||||    
T  36598309 cataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgt 36598363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 1431945 - 1431998
Alignment:
Q  238 gcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    |||||| || |||||||||||||| | |||||||||||||||| | ||||||||    
T  1431945 gcataagcacttgtgagactgtttaggagagcttatggaaacatcatatgacat 1431998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 11208471 - 11208409
Alignment:
Q  310 atagtttatgaaaacaacatatagtttttatttgaaaaaagtttctgtttattttatcttttgtt 374  Q
    |||| |||||||||||||||||||  ||||| ||||||  ||||  |||||||||||||||||||    
T  11208471 atagcttatgaaaacaacatatag--tttatatgaaaacggtttgagtttattttatcttttgtt 11208409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 12234852 - 12234901
Alignment:
Q  249 tgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    |||||||||| |||| | ||||||| |||||| |||||||||||||||||    
T  12234852 tgtgagactgcttggaatagcttatagaaacaacttatgacatgtctata 12234901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 22387859 - 22387908
Alignment:
Q  249 tgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||||||| |||||||||| ||||| |||||| ||||| ||||    
T  22387859 tgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttata 22387908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 28727729 - 28727770
Alignment:
Q  252 gagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||||||||  ||||||||||||||| |||||||||||||    
T  28727729 gagactgtttgagagagcttatggaaacggcttatgacatgt 28727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 39360129 - 39360088
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||    
T  39360129 gtgagactgtttgatagagtttatggaaacaacttatgacat 39360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 41040275 - 41040230
Alignment:
Q  246 atttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||| || ||| | |||||||||||||||||||||||||||    
T  41040275 atttgtgaggctctttagaagagcttatggaaacagcttatgacat 41040230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 45859489 - 45859534
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||||||||||||| |||||||| ||||||| | ||||||||||    
T  45859489 ttgtgagactgtttggaagagcttacggaaacaacatatgacatgt 45859534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 33939396 - 33939348
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtcta 296  Q
    ||||||||||||||| || | |||||||||| |||| ||||||||||||    
T  33939396 ttgtgagactgtttgataaaacttatggaaatagctcatgacatgtcta 33939348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 30444000 - 30443960
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgaca 290  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  30444000 gtgagactgtttggtagagcttatgaaaacagcttatgaca 30443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 37273240 - 37273196
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||| |||||||||||||||| |||||||||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgacatgtc 37273196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 21872248 - 21872342
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaacaacatatag 333  Q
    ||||| || |||||||||||||||| | ||||| || ||| ||||||||||||||| |||  || || || |||| ||||||||||||| |||||    
T  21872248 cataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaactttccaggatagcttatgaaaacaacttatag 21872342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 24624318 - 24624272
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||    
T  24624318 ttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtc 24624272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 2100141 - 2100186
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||    
T  2100141 ttgtgagactgtttgtgagagcttatggagacagcttatgacatgt 2100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 48816429 - 48816517
Alignment:
Q  237 tgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctctctagaatagtttatgaaaaca 325  Q
    |||||||||| ||||| |||||||||  ||| |||||||||||| |||  ||  |||| ||| |||||||| |||| ||||||||||||    
T  48816429 tgcataaccacttgtgggactgtttgaaagatcttatggaaacaacttgcgatgtgtccataagctctctaaaataatttatgaaaaca 48816517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 43115173 - 43115118
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||| || |||||||| ||||||| |||| ||||||||||| |||||||||||||    
T  43115173 cataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtc 43115118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 659822 - 659868
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||  |||||| || ||||||||||||||||||||    
T  659822 ttgtgagactgtttgtgagagctaatagaaacagcttatgacatgtc 659868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 8933903 - 8933849
Alignment:
Q  240 ataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||| ||| ||||||||||||||| |||| ||| ||||| |||||||||||||||    
T  8933903 ataagcatgtgtgagactgtttgggagagattaaggaaatagcttatgacatgtc 8933849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 11039301 - 11039347
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||  ||||||||||||||||  ||||||||||||    
T  11039301 ttgtgagactgtttgaaagagcttatggaaacatattatgacatgtc 11039347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 20194984 - 20195038
Alignment:
Q  237 tgcataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||| || |||||||||||||||  |||||||||| |||||| |||||||||    
T  20194984 tgcataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacat 20195038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 21574595 - 21574553
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgt 293  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatgt 21574553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 30923861 - 30923910
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||    
T  30923861 ttgtgagactgtttatgagagct-atggaaacagcttatgacatgtctata 30923910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 26603300 - 26603255
Alignment:
Q  249 tgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    ||||||| |||||||| ||||| ||||||||| |||||||||||||    
T  26603300 tgtgagattgtttggtggagctcatggaaacaacttatgacatgtc 26603255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 21367777 - 21367733
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    |||||| |||||||||| ||| |||||| ||||||||||||||||    
T  21367777 tttgtgggactgtttgggagaacttatgaaaacagcttatgacat 21367733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 22203539 - 22203496
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||    
T  22203539 tttgtgagactgtttgg-agaacttatgaaaacagcttatgacat 22203496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 27290863 - 27290907
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatg 292  Q
    ||||||| |||||| | |||||||||| |||||||||||||||||    
T  27290863 ttgtgaggctgtttcgaagagcttatgaaaacagcttatgacatg 27290907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 35971983 - 35972015
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaaca 280  Q
    |||||||||||||| ||||||||||||||||||    
T  35971983 ttgtgagactgtttagtagagcttatggaaaca 35972015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 45535173 - 45535225
Alignment:
Q  239 cataaccatttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||| ||||| ||||    
T  45535173 cataaccatctgtgagactatttgggagaacttatggaaacaacttataacat 45535225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 49772632 - 49772676
Alignment:
Q  250 gtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||| | |||||||||||||||| ||||||| |||||    
T  49772632 gtgagactgtttaggagagcttatggaaacaacttatgagatgtc 49772676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 27681 - 27634
Alignment:
Q  251 tgagactgtttggtagagcttatggaaacagcttatgacatgtctata 298  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  27681 tgagactgtttgggagagcttatggaaatagcttatgacatggctata 27634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 303
Target Start/End: Original strand, 42681 - 42739
Alignment:
Q  245 catttgtgagactgtttggtagagcttatggaaacagcttatgacatgtctataggctc 303  Q
    ||||||| ||||||||||| |||| ||||||||| ||||||||| ||||||||| ||||    
T  42681 catttgtaagactgtttggaagagtttatggaaatagcttatgatatgtctataagctc 42739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 4014 - 3968
Alignment:
Q  248 ttgtgagactgtttggtagagcttatggaaacagcttatgacatgtc 294  Q
    |||||||||||||||| |||| |||||||||| ||| ||||||||||    
T  4014 ttgtgagactgtttggaagagtttatggaaacggctcatgacatgtc 3968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 24731 - 24687
Alignment:
Q  247 tttgtgagactgtttggtagagcttatggaaacagcttatgacat 291  Q
    ||||||||||||||||| ||| |||||  ||||||||||||||||    
T  24731 tttgtgagactgtttgggagaacttatcaaaacagcttatgacat 24687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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