View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6120_high_11 (Length: 354)

Name: NF6120_high_11
Description: NF6120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6120_high_11
NF6120_high_11
[»] chr2 (3 HSPs)
chr2 (11-160)||(38919249-38919398)
chr2 (215-354)||(38919453-38919592)
chr2 (11-60)||(11307971-11308020)
[»] chr6 (4 HSPs)
chr6 (26-103)||(24645528-24645605)
chr6 (26-98)||(4877990-4878061)
chr6 (60-96)||(5000557-5000593)
chr6 (60-104)||(17341615-17341659)
[»] chr8 (4 HSPs)
chr8 (26-103)||(36450689-36450766)
chr8 (11-56)||(13845277-13845322)
chr8 (33-98)||(39820482-39820547)
chr8 (66-98)||(34223021-34223053)
[»] chr7 (3 HSPs)
chr7 (27-102)||(7133208-7133284)
chr7 (49-98)||(40131939-40131989)
chr7 (33-98)||(23751953-23752018)
[»] chr5 (3 HSPs)
chr5 (27-75)||(43554574-43554622)
chr5 (33-96)||(7997108-7997172)
chr5 (27-98)||(32766872-32766943)
[»] chr3 (5 HSPs)
chr3 (27-98)||(4704220-4704292)
chr3 (49-100)||(27277778-27277829)
chr3 (27-99)||(21211341-21211414)
chr3 (60-100)||(17005546-17005586)
chr3 (33-96)||(24204983-24205047)
[»] chr1 (5 HSPs)
chr1 (27-98)||(9690213-9690285)
chr1 (49-98)||(34741916-34741965)
chr1 (62-98)||(32724044-32724080)
chr1 (27-99)||(42004881-42004953)
chr1 (50-98)||(48450550-48450598)
[»] chr4 (8 HSPs)
chr4 (20-78)||(10133749-10133808)
chr4 (33-98)||(18513175-18513241)
chr4 (11-100)||(31243474-31243564)
chr4 (26-98)||(34306744-34306816)
chr4 (27-98)||(16184879-16184950)
chr4 (27-98)||(24343560-24343632)
chr4 (28-95)||(46715416-46715484)
chr4 (27-98)||(53381530-53381602)
[»] scaffold0007 (1 HSPs)
scaffold0007 (16-96)||(225199-225279)
[»] scaffold0020 (1 HSPs)
scaffold0020 (49-100)||(135261-135313)


Alignment Details
Target: chr2 (Bit Score: 146; Significance: 7e-77; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 38919249 - 38919398
Alignment:
Q  11 cataggtgtcgtgttagtgtcggtgtcggatactgacgcgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatagttacctgatgga 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919249 cataggtgtcgtgttagtgtcggtgtcggatactgatgcgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatagttacctgatgga 38919348  T
Q  111 agattttggaaggcattgtctgttggggcaaagattgtgaaaccttctga 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919349 agattttggaaggcattgtctgttggggcaaagattgtgaaaccttctga 38919398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 215 - 354
Target Start/End: Original strand, 38919453 - 38919592
Alignment:
Q  215 acgaatgaggaagttgtattgaccagctttttcaaagattgttgtgatgttgattgggcctgagggtgctggtgctggggcttgggcttggatttgtgga 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919453 acgaatgaggaagttgtattgaccagctttttcaaagattgttgtgatgttgattgggcctgagggtgctggtgctggggcttgggcttggatttgtgga 38919552  T
Q  315 gttaagaagtgaatgagagtgagaagaatgagtgcaagag 354  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  38919553 gttaagaagggaatgagagtgagaagaatgagtgcaagag 38919592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 11308020 - 11307971
Alignment:
Q  11 cataggtgtcgtgttagtgtcggtgtcggatactgacgcgtgtccgacac 60  Q
    ||||||||||||||  |||||||||| ||| || ||||||||||||||||    
T  11308020 cataggtgtcgtgtcggtgtcggtgttggacaccgacgcgtgtccgacac 11307971  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 24645528 - 24645605
Alignment:
Q  26 agtgtcggtgtcggatactgacgcgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatagttacc 103  Q
    |||||||||||| || || ||| |||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||    
T  24645528 agtgtcggtgtcagacac-gacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatagttacc 24645605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 4877990 - 4878061
Alignment:
Q  26 agtgtcggtgtcggatactgacgcgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||||||||||||| || ||| | |||||||||||||||||| |||||| || ||||||  |||||||||||    
T  4877990 agtgtcggtgtcggacac-gacacatgtccgacacaggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 5000593 - 5000557
Alignment:
Q  60 caggacacgtctaatctgaagagtgtttgtgcttcat 96  Q
    |||||||||||||||| |||||||||| |||||||||    
T  5000593 caggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 17341659 - 17341615
Alignment:
Q  60 caggacacgtctaatctgaagagtgtttgtgcttcatagttacct 104  Q
    ||||||||| |||||| || |||||||||||||||||| ||||||    
T  17341659 caggacacgcctaatccgaggagtgtttgtgcttcataattacct 17341615  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 36450766 - 36450689
Alignment:
Q  26 agtgtcggtgtcggatactgacgcgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatagttacc 103  Q
    ||||| ||||||||| || |||||||||||||||| |||||||| |||||| || |||||| |||||||||||| ||||    
T  36450766 agtgtaggtgtcggacac-gacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatagctacc 36450689  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 13845277 - 13845322
Alignment:
Q  11 cataggtgtcgtgttagtgtcggtgtcggatactgacgcgtgtccg 56  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||    
T  13845277 cataggtgtcgtgtctgtgtcggtgtcggacactgacgcgtgtccg 13845322  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 39820482 - 39820547
Alignment:
Q  33 gtgtcggatactgacgcgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||| || |||||||||||||||| ||||||| |||||| ||  |||||  |||||||||||    
T  39820482 gtgtcggacaccgacgcgtgtccgacacgggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 34223021 - 34223053
Alignment:
Q  66 acgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||||||||| |||||||||||||||||||||    
T  34223021 acgtctaatctaaagagtgtttgtgcttcatag 34223053  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 7133284 - 7133208
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatagttac 102  Q
    |||||||||||||| || ||||||||||||||||  ||||||  ||||||||| ||| ||  |||||||||||||||    
T  7133284 gtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatagttac 7133208  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 40131989 - 40131939
Alignment:
Q  49 cgtgtccgacacagg-acacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||||||||||||| |||||||||||| || |||||| ||||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 23751953 - 23752018
Alignment:
Q  33 gtgtcggatactgacgcgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||| || |||||||||| ||||| ||||||| |||||| ||  ||||| ||||||||||||    
T  23751953 gtgtcggacaccgacgcgtgtcagacacgggacacgcctaatccgataagtgtctgtgcttcatag 23752018  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 43554574 - 43554622
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacacaggacacgtctaatc 75  Q
    |||||||||||||| || |||||||||||||||| ||||||| ||||||    
T  43554574 gtgtcggtgtcggacaccgacgcgtgtccgacacgggacacgcctaatc 43554622  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 7997172 - 7997108
Alignment:
Q  33 gtgtcggatactgacgcgtgtccgaca-caggacacgtctaatctgaagagtgtttgtgcttcat 96  Q
    |||||||| |||||||||||||||||| ||||||||  |||||  ||  ||||||||||||||||    
T  7997172 gtgtcggacactgacgcgtgtccgacatcaggacacacctaattcgagaagtgtttgtgcttcat 7997108  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 32766943 - 32766872
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||||||| | || ||| |||||||||||| |||| ||||||||||||| ||||||  |||||||||||    
T  32766943 gtgtcggtgtcgaaaac-gacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 4704292 - 4704220
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||||||||| || ||| |||||||||| |||| ||||||| |||||||||| || ||||||||| ||||||    
T  4704292 gtgtcggtgtctgacactaacgcgtgtccaacactaggacacatctaatctgaggaatgtttgtgcgtcatag 4704220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 27277829 - 27277778
Alignment:
Q  49 cgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatagtt 100  Q
    |||||||||||| ||||| |||||||| || |||||| ||||||||||||||    
T  27277829 cgtgtccgacacgggacatgtctaatccgaggagtgtatgtgcttcatagtt 27277778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 21211341 - 21211414
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacacagg-acacgtctaatctgaagagtgtttgtgcttcatagt 99  Q
    ||||||||||  || || |||||||||||||||| || ||||  |||||| || ||||||||||||||||||||    
T  21211341 gtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatagt 21211414  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 17005586 - 17005546
Alignment:
Q  60 caggacacgtctaatctgaagagtgtttgtgcttcatagtt 100  Q
    |||||||| ||||||| || |||||||||||||||||||||    
T  17005586 caggacacctctaatccgaggagtgtttgtgcttcatagtt 17005546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 24205047 - 24204983
Alignment:
Q  33 gtgtcggatactgacgcgtgtccgaca-caggacacgtctaatctgaagagtgtttgtgcttcat 96  Q
    |||||||| |||||||||||||||||| ||||||||| |||||  || ||||||  |||||||||    
T  24205047 gtgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 9690285 - 9690213
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacacagg-acacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||||| |||||  |||||| |||||||||||| || ||||| |||||| | ||||||||||||||||||||    
T  9690285 gtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatag 9690213  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 34741916 - 34741965
Alignment:
Q  49 cgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||||||| ||||||| |||||| |||||||||  |||||||||||    
T  34741916 cgtgtccgacacgggacacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 32724080 - 32724044
Alignment:
Q  62 ggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  32724080 ggacacgtttaatctgaagagtctttgtgcttcatag 32724044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 42004953 - 42004881
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatagt 99  Q
    |||||||||||||| || ||||| ||||||||||   ||||| |||||  |||||||||  ||||||||||||    
T  42004953 gtgtcggtgtcggacaccgacgcatgtccgacactaaacacgcctaattcgaagagtgtccgtgcttcatagt 42004881  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 48450598 - 48450550
Alignment:
Q  50 gtgtccgacacaggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||| |||||||||||||||||||| || ||||||  |||||||||||    
T  48450598 gtgtcggacacaggacacgtctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000008; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 10133749 - 10133808
Alignment:
Q  20 cgtgttagtgtcggtgtcggatactgacgcgtgtccgaca-caggacacgtctaatctga 78  Q
    |||||| ||||||||||| || |||||||||||||||||| ||||||||  |||||||||    
T  10133749 cgtgttggtgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctga 10133808  T

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Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 18513241 - 18513175
Alignment:
Q  33 gtgtcggatactgacgcgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||| || |||| ||||||||||| |||||||| ||||||||| ||||||  |||||||||||    
T  18513241 gtgtcggacaccgacgtgtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 31243564 - 31243474
Alignment:
Q  11 cataggtgtcgtgttagtgtcggtgtcggatactgacgcgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatagtt 100  Q
    |||||||||| |||  |||| ||||||||| || || |||||| |||||| |||||||  ||||| ||| ||||||||||| |||||||||    
T  31243564 cataggtgtcatgtcggtgttggtgtcggacaccgatgcgtgttcgacaccaggacacacctaatatgaggagtgtttgtggttcatagtt 31243474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 34306816 - 34306744
Alignment:
Q  26 agtgtcggtgtcggatactgacgcgtgtccgacacag-gacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||||||||||||| || ||| |||||||||||| | |||||| ||||||||| || |||| |||||||||||    
T  34306816 agtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 16184879 - 16184950
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgacacagg-acacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||||||| |||| || || |||||||||| || ||||| |||||| || |||||||||||||||||||    
T  16184879 gtgtcggtgtcgcatac-gatgcctgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 24343560 - 24343632
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgaca-caggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    ||||||||||| || || ||||||||||||||| | ||||||| ||| ||||| ||||||  |||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 46715484 - 46715416
Alignment:
Q  28 tgtcggtgtcggatactgacgcgtgtccgacacagg-acacgtctaatctgaagagtgtttgtgcttca 95  Q
    |||| |||||||| |||| |||||||||||||| || ||| |||||||| || ||||||| ||||||||    
T  46715484 tgtctgtgtcggacactgccgcgtgtccgacaccggcacatgtctaatccgaggagtgttcgtgcttca 46715416  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 53381602 - 53381530
Alignment:
Q  27 gtgtcggtgtcggatactgacgcgtgtccgaca-caggacacgtctaatctgaagagtgtttgtgcttcatag 98  Q
    |||||||||||||| |||||||||| ||||||| | ||||||  |||||| || ||||||  |||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 225279 - 225199
Alignment:
Q  16 gtgtcgtgttagtgtcggtgtcggatactgacgcgtgtccgaca-caggacacgtctaatctgaagagtgtttgtgcttcat 96  Q
    |||||||||| |||||| ||||||| |||||||||||| ||||| ||||||||| |||||  || ||||||  |||||||||    
T  225279 gtgtcgtgttggtgtcg-tgtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 135313 - 135261
Alignment:
Q  49 cgtgtccgacac-aggacacgtctaatctgaagagtgtttgtgcttcatagtt 100  Q
    |||||||||||| |||||||| ||||||||| | ||||| |||||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatagtt 135261  T

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