View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6120_high_19 (Length: 278)

Name: NF6120_high_19
Description: NF6120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6120_high_19
NF6120_high_19
[»] chr3 (13 HSPs)
chr3 (1-266)||(40414772-40415037)
chr3 (223-263)||(4016515-4016555)
chr3 (1-104)||(40414690-40414786)
chr3 (203-269)||(42247164-42247230)
chr3 (204-245)||(34519580-34519621)
chr3 (204-263)||(18971498-18971557)
chr3 (204-247)||(27634679-27634722)
chr3 (212-263)||(28958946-28958997)
chr3 (209-263)||(38878425-38878479)
chr3 (204-263)||(5030042-5030102)
chr3 (223-263)||(23369178-23369218)
chr3 (223-263)||(47340031-47340071)
chr3 (208-272)||(54684606-54684670)
[»] chr5 (12 HSPs)
chr5 (156-263)||(34278721-34278828)
chr5 (148-263)||(41625287-41625402)
chr5 (196-263)||(6500181-6500248)
chr5 (168-263)||(26440606-26440701)
chr5 (212-263)||(6734842-6734893)
chr5 (204-263)||(9936840-9936899)
chr5 (150-189)||(11241774-11241813)
chr5 (209-263)||(19344651-19344705)
chr5 (209-263)||(32473974-32474028)
chr5 (210-263)||(5984998-5985051)
chr5 (198-263)||(6175078-6175143)
chr5 (212-260)||(35641830-35641878)
[»] chr6 (6 HSPs)
chr6 (165-263)||(26210761-26210859)
chr6 (157-263)||(26240761-26240866)
chr6 (206-263)||(24693193-24693250)
chr6 (212-263)||(16661558-16661609)
chr6 (209-263)||(10105869-10105923)
chr6 (157-257)||(11973354-11973454)
[»] chr2 (7 HSPs)
chr2 (168-263)||(31975484-31975579)
chr2 (168-260)||(45001838-45001930)
chr2 (213-263)||(14802922-14802972)
chr2 (211-260)||(25765690-25765739)
chr2 (209-263)||(5096306-5096360)
chr2 (209-263)||(10333529-10333583)
chr2 (157-266)||(3566160-3566269)
[»] scaffold0316 (1 HSPs)
scaffold0316 (157-260)||(7499-7602)
[»] chr4 (4 HSPs)
chr4 (168-263)||(42862241-42862336)
chr4 (212-263)||(28914429-28914480)
chr4 (216-263)||(36662650-36662697)
chr4 (223-263)||(50684992-50685032)
[»] chr1 (11 HSPs)
chr1 (168-263)||(32834809-32834903)
chr1 (157-263)||(40711052-40711160)
chr1 (213-263)||(8980736-8980786)
chr1 (211-263)||(43891462-43891514)
chr1 (168-243)||(15443417-15443492)
chr1 (208-263)||(48896976-48897031)
chr1 (212-266)||(23337868-23337922)
chr1 (209-263)||(44741401-44741455)
chr1 (204-262)||(47912334-47912392)
chr1 (209-263)||(52749339-52749393)
chr1 (204-263)||(3277635-3277695)
[»] chr8 (11 HSPs)
chr8 (172-246)||(29802693-29802767)
chr8 (223-266)||(23849687-23849730)
chr8 (168-263)||(1226520-1226616)
chr8 (223-263)||(27563035-27563075)
chr8 (223-263)||(32061250-32061290)
chr8 (168-247)||(11335391-11335470)
chr8 (208-263)||(25118843-25118898)
chr8 (168-263)||(27505696-27505791)
chr8 (209-263)||(29917877-29917931)
chr8 (223-263)||(14378635-14378675)
chr8 (209-261)||(36632144-36632196)
[»] scaffold0196 (1 HSPs)
scaffold0196 (157-257)||(26239-26339)
[»] chr7 (4 HSPs)
chr7 (204-263)||(40231981-40232040)
chr7 (208-263)||(5887897-5887952)
chr7 (208-263)||(40348556-40348611)
chr7 (206-263)||(14201526-14201585)


Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 40414772 - 40415037
Alignment:
Q  1 cacataccgaaatggtattgatataacatcattaaggcacatacctagatcaaatggtagttgcacaaccttttttaattaaatattccaacataccgaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40414772 cacataccgaaatggtattgatatcacatcattaaggcacatacctaaatcaaatggtagttgcacaaccttttttaattaaatattccaacataccgaa 40414871  T
Q  101 atgggactcgctgaaccttcaaattaaataatgcccatgccttaattaatactcattccgtctcatattaaatgacctaatttaaaaatgtttatggttc 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  40414872 atggcactcgctgaaccttcaaattaaataatgcccatgccttaattaatactcattccgtctcatattaaatgatctaatttaaaaatgtttatgattc 40414971  T
Q  201 atgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagatttt 266  Q
    || |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40414972 atataatatgttttgatcttatttttctactaatatataaagacaaaatatatcatataagatttt 40415037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 4016515 - 4016555
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  4016515 ttttttactaatatataaagacaaaatatatcatataagat 4016555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40414690 - 40414786
Alignment:
Q  1 cacataccgaaatggtattgatataacatcattaaggcacatacctagatcaaatggtagttgcacaaccttttttaattaaatattccaacataccgaa 100  Q
    |||||||||||||||||||||||| | ||||||||  || || ||||     ||||||||||||||||||||    ||||||||||||| ||||||||||    
T  40414690 cacataccgaaatggtattgatatcatatcattaaaccagatgccta-----aatggtagttgcacaaccttac--aattaaatattcccacataccgaa 40414782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 42247164 - 42247230
Alignment:
Q  203 gtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagattttctt 269  Q
    |||||||||||||||| || ||||||||||| ||||||||| |||  ||||| |||||||| |||||    
T  42247164 gtaatatattttgaccatatttttctactaaaatataaagataaataatatcttataagatgttctt 42247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 34519621 - 34519580
Alignment:
Q  204 taatatattttgaccttacttttctactaatatataaagaca 245  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  34519621 taatatattttgatcatacttttctactaatatataaagaca 34519580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 18971557 - 18971498
Alignment:
Q  204 taatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||||  || ||||||||||||||||||| | |||  ||||||||||||||    
T  18971557 taatatattttgactatatttttctactaatatataaaaataaataatatcatataagat 18971498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 27634722 - 27634679
Alignment:
Q  204 taatatattttgaccttacttttctactaatatataaagacaaa 247  Q
    |||||||||||||   ||||||||||||||||||||||||||||    
T  27634722 taatatattttgatgatacttttctactaatatataaagacaaa 27634679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 28958997 - 28958946
Alignment:
Q  212 tttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||| || ||||||||||||||||||||| |||  ||||||||||||||    
T  28958997 tttgaccatatttttctactaatatataaagataaataatatcatataagat 28958946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 38878479 - 38878425
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  38878479 tattttgaccatatttttctactaatataaaaagataaataatatcatataagat 38878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 5030042 - 5030102
Alignment:
Q  204 taatatattttgaccttacttttctactaatatataaagacaaa-atatatcatataagat 263  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||| |  |||||||||||||    
T  5030042 taatatactttgaccgtacttttctactaatatacaaagataaataattatcatataagat 5030102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 23369218 - 23369178
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||| |||||||||||||||||||| |||||||| ||||||    
T  23369218 ttttttactaatatataaagacaaactatatcatgtaagat 23369178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 47340071 - 47340031
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  47340071 ttttctactaatatataaagataaataatatcatataagat 47340031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 54684670 - 54684606
Alignment:
Q  208 atattttgaccttacttttctactaatatataaagacaaaatatatcatataagattttcttcga 272  Q
    ||||||||||| || ||||||||||||||| ||||| |||  |||| ||||||||| || |||||    
T  54684670 atattttgaccgtatttttctactaatatacaaagataaataatattatataagatgttgttcga 54684606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 34278828 - 34278721
Alignment:
Q  156 ttccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatca 255  Q
    ||||||| ||| ||| |||||||||||| ||||||| ||| |||||| ||| || ||||||||||| |||||||||||||||||||||||||||||| ||    
T  34278828 ttccgtcccattttatatgacctaattttaaaatgtgtattgttcatataacatgttttgaccttatttttctactaatatataaagacaaaatataaca 34278729  T
Q  256 tataagat 263  Q
    ||||||||    
T  34278728 tataagat 34278721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 41625402 - 41625287
Alignment:
Q  148 aatactcattccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaa 247  Q
    |||||||| |||||| | | |||||||||  ||||||||||| | ||| |||||||||| |   ||||||  || ||||||| |||||||||||||||||    
T  41625402 aatactcactccgtcccgttttaaatgacacaatttaaaaatatatattgttcatgtaacacgctttgactctatttttctattaatatataaagacaaa 41625303  T
Q  248 atatatcatataagat 263  Q
    |||||  |||||||||    
T  41625302 atatagtatataagat 41625287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 6500181 - 6500248
Alignment:
Q  196 ggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||| ||| ||| ||||||  || ||||||| |||||||||||||||||||||| ||||||||||    
T  6500181 ggttcatataacatactttgactctatttttctattaatatataaagacaaaatatagcatataagat 6500248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 26440701 - 26440606
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||| ||||| | ||||| | ||| |||||| ||| ||  ||| |||||| |||||||||||||||||| |||||||||||  |||||||||    
T  26440701 ttaaatgatctaatctgaaaatatgtattgttcatttaacatgctttaaccttatttttctactaatatataacgacaaaatataggatataagat 26440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 6734842 - 6734893
Alignment:
Q  212 tttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||| || ||||||||||||||||||||| |||  ||||||||||||||    
T  6734842 tttgaccataattttctactaatatataaagataaataatatcatataagat 6734893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 9936899 - 9936840
Alignment:
Q  204 taatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||| |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  9936899 taatttattttgaccatatttttctactaatatacaaagataaataatatcatataagat 9936840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 11241813 - 11241774
Alignment:
Q  150 tactcattccgtctcatattaaatgacctaatttaaaaat 189  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  11241813 tactcattccgtcttattttaaatgacctaatttaaaaat 11241774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 19344705 - 19344651
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  19344705 tattttgaccatatttttctactaatatacaaagataaataatatcatataagat 19344651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 32474028 - 32473974
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  32474028 tattttgaccatatttttctactaatatacaaagataaataatatcatataagat 32473974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 5984998 - 5985051
Alignment:
Q  210 attttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  5984998 attttgaccgtatttttctactaatatacaaagataaataatatcatataagat 5985051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 6175143 - 6175078
Alignment:
Q  198 ttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||| ||||||| |||||  | | |||| || |||||||||||||||||||||| ||||||||||    
T  6175143 ttcatataatatactttgatttaatttttttattaatatataaagacaaaatatagcatataagat 6175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 35641830 - 35641878
Alignment:
Q  212 tttgaccttacttttctactaatatataaagacaaaatatatcatataa 260  Q
    ||||||| || ||||||||||||||||||||| |||  |||||||||||    
T  35641830 tttgaccatatttttctactaatatataaagataaataatatcatataa 35641878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 26210761 - 26210859
Alignment:
Q  165 atattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||||||||||||||||||   ||| |||| | ||| ||  |||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  26210761 atattaaatgacctaatttaaaaatacatattgttcgtataacatgatttgaccttatttttctactaatttataaagacaaaatatattatataagat 26210859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 26240761 - 26240866
Alignment:
Q  157 tccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcat 256  Q
    ||||||| || |||||||||||| ||||||||| || |  |||||| |||||| ||||||||||| |||||||||||||||||||| | ||||||| |||    
T  26240761 tccgtcttattttaaatgacctattttaaaaatcttcaatgttcatataatatgttttgaccttatttttctactaatatataaag-ccaaatataacat 26240859  T
Q  257 ataagat 263  Q
    |||||||    
T  26240860 ataagat 26240866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 24693193 - 24693250
Alignment:
Q  206 atatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  24693193 atatattttgaccatatttttctactaatatacaaagataaataatatcatataagat 24693250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 16661609 - 16661558
Alignment:
Q  212 tttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||| || ||||||||||||||||||||| |||  ||||||||||||||    
T  16661609 tttgaccgtatttttctactaatatataaagataaataatatcatataagat 16661558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 10105869 - 10105923
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||| ||| || ||||||||||||||||||||| |||  ||||||||||||||    
T  10105869 tattttaaccatatttttctactaatatataaagataaataatatcatataagat 10105923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 11973354 - 11973454
Alignment:
Q  157 tccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcat 256  Q
    |||||| ||| ||||||||  |||||||||||| |  || ||| |  ||||||| ||||| | || |||| |||||||||||||||| |||||||| |||    
T  11973354 tccgtcacattttaaatgatataatttaaaaatatgcattgtttacataatataatttgatcatatttttgtactaatatataaagataaaatatagcat 11973453  T
Q  257 a 257  Q
    |    
T  11973454 a 11973454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 31975579 - 31975484
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||||||||||||||||| ||| | |||  ||| ||| ||||| | || |||||||||||||||||| || |||||||||||||||||||    
T  31975579 ttaaatgacctaatttaaaaatgtgtattgctcacataacatagtttgatcctatttttctactaatatataatgataaaatatatcatataagat 31975484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 45001930 - 45001838
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataa 260  Q
    |||||||| ||| ||| ||||||| |||  ||||| ||| ||||||||||  || |||||| ||||||||||||||||||||||| |||||||    
T  45001930 ttaaatgatctagttttaaaatgtgtattattcatataacatattttgactctatttttctgctaatatataaagacaaaatatagcatataa 45001838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 14802972 - 14802922
Alignment:
Q  213 ttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  14802972 ttgaccatatttttctactaatatataaagacaaaatatagcatataagat 14802922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 25765690 - 25765739
Alignment:
Q  211 ttttgaccttacttttctactaatatataaagacaaaatatatcatataa 260  Q
    ||||||||||| ||||||||| ||||||||||||||| |||| |||||||    
T  25765690 ttttgaccttatttttctactcatatataaagacaaattataacatataa 25765739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 5096306 - 5096360
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||| | || ||||||||||||||||||||| |||  ||||||||||||||    
T  5096306 tattttgatcatatttttctactaatatataaagataaataatatcatataagat 5096360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 10333583 - 10333529
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  10333583 tattttgaccatatttttctactaatatacaaagataaataatatcatataagat 10333529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 3566160 - 3566269
Alignment:
Q  157 tccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcat 256  Q
    |||||| ||| ||||||||| |||||||||||| |  || ||| |  ||||||| ||||  | || |||| ||||||||||||||||||||| ||| ||     
T  3566160 tccgtcccattttaaatgacataatttaaaaatatacattgtttacataatataatttggtcatatttttgtactaatatataaagacaaaacatagcac 3566259  T
Q  257 ataagatttt 266  Q
    |||| |||||    
T  3566260 ataaaatttt 3566269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 7602 - 7499
Alignment:
Q  157 tccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcat 256  Q
    |||||| ||| ||||||||| |||||||||||| |  || ||| |  ||||||| ||||| | || |||| ||||||||||||||||||||||||| |||    
T  7602 tccgtcacattttaaatgacataatttaaaaatatgcattgtttacataatataatttgatcgtatttttgtactaatatataaagacaaaatatagcat 7503  T
Q  257 ataa 260  Q
    ||||    
T  7502 ataa 7499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 42862336 - 42862241
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||||||||||||||||| ||| |||||    | || |||||||  ||  |||||||||||||||||||| |||||||| ||||||||||    
T  42862336 ttaaatgacctaatttaaaaatgtgtattgttcacaatacatgttttgactctatatttctactaatatataaagataaaatataacatataagat 42862241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 28914429 - 28914480
Alignment:
Q  212 tttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||| || ||||||||||||||||||||| |||  ||||||||||||||    
T  28914429 tttgaccatatttttctactaatatataaagataaataatatcatataagat 28914480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 36662697 - 36662650
Alignment:
Q  216 accttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||| ||||||||||||||||||||| |||  ||||||||||||||    
T  36662697 accttatttttctactaatatataaagataaataatatcatataagat 36662650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 50684992 - 50685032
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  50684992 ttttctactaatatataaagataaataatatcatataagat 50685032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 32834809 - 32834903
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||||||||||||||| | ||  |  ||| |||| | |||||| | || |||||||||||||||||||||||||||||| ||||||||||    
T  32834809 ttaaatgacctaatttaaaaatatgtaatga-catataatttgttttgatcctatttttctactaatatataaagacaaaatataacatataagat 32834903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 263
Target Start/End: Complemental strand, 40711160 - 40711052
Alignment:
Q  157 tccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatata--aagacaaaatatatc 254  Q
    |||||||| | ||||||||| |||||| ||||||  || | ||||  ||| || |||||| |||| |||||||||||||||||  ||||||||||||| |    
T  40711160 tccgtctctttttaaatgacataatttgaaaatgcgtacgattcacataacatgttttgatcttatttttctactaatatatataaagacaaaatataac 40711061  T
Q  255 atataagat 263  Q
    |||||||||    
T  40711060 atataagat 40711052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 8980736 - 8980786
Alignment:
Q  213 ttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||| || ||||||| |||||||||||||||||||||| ||||||||||    
T  8980736 ttgaccctatttttctattaatatataaagacaaaatatagcatataagat 8980786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 43891462 - 43891514
Alignment:
Q  211 ttttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||| |||||| ||||||||||||||||| ||||||||||||  |||||||||    
T  43891462 tttttaccttatttttctactaatatatacagacaaaatataatatataagat 43891514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 15443492 - 15443417
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaaga 243  Q
    |||||||||||| |||||||||||  ||  |||| |||| || |||||| | || |||||||||||||||||||||    
T  15443492 ttaaatgacctattttaaaaatgtgcattattcacgtaacatgttttgatcatatttttctactaatatataaaga 15443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 48896976 - 48897031
Alignment:
Q  208 atattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||| || ||||||||||||||||||| | |||  ||||||||||||||    
T  48896976 atattttgaccatatttttctactaatatataaacataaataatatcatataagat 48897031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 23337868 - 23337922
Alignment:
Q  212 tttgaccttacttttctactaatatataaagacaaaatatatcatataagatttt 266  Q
    ||||||| || ||||||||||||||| ||||| |||  |||||||||||||||||    
T  23337868 tttgaccatatttttctactaatatacaaagataaataatatcatataagatttt 23337922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 44741401 - 44741455
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  44741401 tattttgaccatatttttctactaatatacaaagataaataatatcatataagat 44741455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 47912334 - 47912392
Alignment:
Q  204 taatatattttgaccttacttttctactaatatataaagacaaaatatatcatataaga 262  Q
    |||| |||||||||| || ||||||||||||||| ||||| |||  |||||||||||||    
T  47912334 taatttattttgaccatatttttctactaatatacaaagataaataatatcatataaga 47912392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 52749339 - 52749393
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  52749339 tattttgaccatatttttctactaatatacaaagataaataatatcatataagat 52749393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 3277695 - 3277635
Alignment:
Q  204 taatatattttgacct-tacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||| |||||||| || ||||||||||||||||||||| |||  |||| |||||||||    
T  3277695 taatatactttgacctatatttttctactaatatataaagataaataatataatataagat 3277635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 29802767 - 29802693
Alignment:
Q  172 atgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaa 246  Q
    |||||||||||| ||||||| |||  ||||| |||||| |||||||| || ||||||||||||||| ||||||||    
T  29802767 atgacctaatttgaaaatgtgtattattcatataatatgttttgaccatatttttctactaatatacaaagacaa 29802693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 23849687 - 23849730
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagatttt 266  Q
    |||||||| ||||||||||||||||||||| |||||||||||||    
T  23849687 ttttctacaaatatataaagacaaaatataacatataagatttt 23849730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 1226520 - 1226616
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgacct-tacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||| ||| ||||||||||||| ||| |||||  ||| || ||||||  | || ||||||||||||||||||| |||||| ||| ||||||||||    
T  1226520 ttaaataacccaatttaaaaatgtatattgttcacataacatgttttgagatctatttttctactaatatataaaaacaaaaaatagcatataagat 1226616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 27563075 - 27563035
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  27563075 ttttctactaatatataaagataaaatatagcatataagat 27563035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 32061290 - 32061250
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  32061290 ttttctactaatatacaaagacaaattatatcatataagat 32061250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 11335470 - 11335391
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaa 247  Q
    |||||||| ||| ||||||||||| |||  ||||  ||| ||| ||||||| || ||||||||||||||| |||||||||    
T  11335470 ttaaatgatctattttaaaaatgtgtattattcacataacatactttgaccatatttttctactaatatacaaagacaaa 11335391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 25118843 - 25118898
Alignment:
Q  208 atattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||||||  ||||||||||||||| ||||| |||  ||||||||||||||    
T  25118843 atattttgaccttctttttctactaatatacaaagataaataatatcatataagat 25118898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 27505696 - 27505791
Alignment:
Q  168 ttaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||||||||||| || ||   ||||| ||| ||  |||||||||| || | ||| |||||||||| || ||||||| ||||||||||    
T  27505696 ttaaatgacctaatttaaaaaagtgtactattcatataacatgctttgaccttatttatttacaaatatataaatacgaaatatagcatataagat 27505791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 29917931 - 29917877
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  29917931 tattttgaccatatttttctactaatatacaaagataaataatatcatataagat 29917877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 14378675 - 14378635
Alignment:
Q  223 ttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  14378675 ttttctactaatatataaagataaataatatcatataagat 14378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 36632196 - 36632144
Alignment:
Q  209 tattttgaccttacttttctactaatatataaagacaaaatatatcatataag 261  Q
    |||||||||| || ||||||||||||||| ||||| |||  ||||||||||||    
T  36632196 tattttgaccatatttttctactaatataaaaagataaataatatcatataag 36632144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 26239 - 26339
Alignment:
Q  157 tccgtctcatattaaatgacctaatttaaaaatgtttatggttcatgtaatatattttgaccttacttttctactaatatataaagacaaaatatatcat 256  Q
    |||||| ||| ||||||||| |||||||||||| |  || ||| |  ||||||| ||||| | || |||| ||||||||||||||||||||||||| |||    
T  26239 tccgtcccattttaaatgacataatttaaaaatatgcattgtttacataatataatttgatcatatttttgtactaatatataaagacaaaatatagcat 26338  T
Q  257 a 257  Q
    |    
T  26339 a 26339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 40231981 - 40232040
Alignment:
Q  204 taatatattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    |||| |||||||||| || ||||||||||||||||||||| |||  ||||||||||||||    
T  40231981 taatttattttgaccatatttttctactaatatataaagataaataatatcatataagat 40232040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 5887897 - 5887952
Alignment:
Q  208 atattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||| | || ||||||||||||||| |||||||||  ||||||||||||||    
T  5887897 atattttgatcatatttttctactaatatacaaagacaaatgatatcatataagat 5887952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 40348611 - 40348556
Alignment:
Q  208 atattttgaccttacttttctactaatatataaagacaaaatatatcatataagat 263  Q
    ||||||||||| || ||||||||||||||| ||||| |||  ||||||||||||||    
T  40348611 atattttgaccatatttttctactaatatacaaagataaataatatcatataagat 40348556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 14201585 - 14201526
Alignment:
Q  206 atatattttgaccttacttttctactaatatataaagacaa--aatatatcatataagat 263  Q
    |||||||||||| ||| ||||||||||||||| ||||| ||  |||| ||||||||||||    
T  14201585 atatattttgacattatttttctactaatatacaaagataaataatacatcatataagat 14201526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University