View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6123_high_7 (Length: 239)
Name: NF6123_high_7
Description: NF6123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6123_high_7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 32297491 - 32297270
Alignment:
| Q |
18 |
gaaccaaacaccgatcttcttccctcgacacttggcagtgacgatccaactcctccccttgttcaaatccagacaacaaattggcagttacattatgaca |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32297491 |
gaaccaaacaccgatcttcttccctcgacacttggcagtgacgatccaactcctccccttgttcaaatccagacaacaaattggcagttacattatgaca |
32297392 |
T |
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| Q |
118 |
aggcacaaaattctccctttcttttccacaaagccctaactccttctgcttcaaaccaccgctggaaacagatttcagctccaaataatcaaccgccaca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32297391 |
aggcacaaaattctccctttcttttccacaaagccctaactccttctgcttcaaaccaccgctggaaacagatttcagctccaaataatcaaccgccaca |
32297292 |
T |
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| Q |
218 |
cgctctttaatccttctataat |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
32297291 |
cgctctttaatccttctataat |
32297270 |
T |
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