View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6124_high_15 (Length: 287)
Name: NF6124_high_15
Description: NF6124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6124_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 277
Target Start/End: Complemental strand, 41335280 - 41335021
Alignment:
| Q |
19 |
aagaataggtaaaagtcggatgttacacgcatttatacaagtaataaaaa-gctgttgtattgttctgaagtttgctttaggaggactagggtgtcatga |
117 |
Q |
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| T |
41335280 |
aagaataggtaaaagtcggatgttacacgcatttatacaagtaataaaaaagctgttgtattgttctgaagtttgctttaggaggactagggtgtcatga |
41335181 |
T |
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| Q |
118 |
ctcaatagcaaagcaaatatgatagcaaattgttagcctgtcatagacatggagcttctttcataaatacctgataattatctttaaatttcgtttttat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41335180 |
ctcaatagcaaagcaaatatgatagcaaattgttagcctgtcatagacatggagcttctttcataaatacctgataattatctttaaatttcgtttttat |
41335081 |
T |
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| Q |
218 |
gtttcaattatgtatttggcaacatttgttacgcgtgtaacatgccttccttcacctatg |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41335080 |
gtttcaattatgtatttggcaacatttgttacgcgtgtaacatgccttccttcacctatg |
41335021 |
T |
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