View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6124_high_26 (Length: 240)
Name: NF6124_high_26
Description: NF6124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6124_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 47498556 - 47498344
Alignment:
| Q |
18 |
agtattcgttcaaacatttttgtataatcaattaatatcagtatagattagtcaagtaaacagcaattttaatttctgcattacgaaatgataagaaata |
117 |
Q |
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| T |
47498556 |
agtattcgttcaaacatttttgtataatcaattaatatcagtatagattagtcaagtaaacagcaattttaatttctgcattacgaaatgataagaaata |
47498457 |
T |
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| Q |
118 |
ctaattctcctccactgaatttcaatgtcggnnnnnnnnngaaagatatttcaatgttcaacaatatatat--------tctacgtgacgaaaagggtag |
209 |
Q |
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||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
47498456 |
ctaattctcctccactgaatttcaatgtcggaaaaaaa---aaaaaattttcaatgttcaacaatatatattctacgaatctacgtgacgaaaagggtag |
47498360 |
T |
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| Q |
210 |
gatagttaaatattct |
225 |
Q |
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|||||||||||||||| |
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| T |
47498359 |
gatagttaaatattct |
47498344 |
T |
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