View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6125_high_10 (Length: 270)
Name: NF6125_high_10
Description: NF6125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6125_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 40633799 - 40634045
Alignment:
| Q |
19 |
gattctactaaagttaatgccttgaaaaattccctttgttttgataaactgctcaaatattacttatatatgtatagtgttattatttgaacgtcacagt |
118 |
Q |
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| T |
40633799 |
gattctactaaagttaatgccttgaaaaattccctttgttttgataaattgctcaaatattacttatatatgtatagtgttatgatttgaacgtcacaat |
40633898 |
T |
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| Q |
119 |
tctaacaccgccgatgtgattgaaagaaagaaaacaaatacataaaactcgaaatcttatgtttatatagtatccgacaatatttgttgtcaatatattt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40633899 |
tctaacaccgccgatgtgattgaaagaaagaaaacaaatacataaaactcgaaatcttatgtttatatagtatccgacaatatttgttgtcaatatattt |
40633998 |
T |
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| Q |
219 |
tctattgtttaatttgtcatcactcaaactgtaaccttcttctcact |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
40633999 |
tctattgtttaatttgtcatcactcaaactgtaaccttcttttcact |
40634045 |
T |
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