View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6125_low_9 (Length: 282)
Name: NF6125_low_9
Description: NF6125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6125_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 15 - 271
Target Start/End: Complemental strand, 35031995 - 35031733
Alignment:
| Q |
15 |
aataataaccaattcattgatagctagcccatctct--ataaaataaagtaaaaaagaatgctatataccattgtcagataaatgcctgatcacttatta |
112 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35031995 |
aataataaccaattcattgatagctagcccatctctgtataaaataaagtaaaaaagaatgctatataccattgtcagataaatgcctgatcacttatta |
35031896 |
T |
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| Q |
113 |
aattttattcgatgcataaagtatggatgtttttgatgaggcaatcaaggtgttttacaagta----ttatatctaaaccttcaaaacccgacagaatgt |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
35031895 |
aattttattcgatgcataaagtatggatgtttttgatgaggcaatcaaggtgttttacaagtagtatatatatctaaaccttcaaaacccgacagaatgt |
35031796 |
T |
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| Q |
209 |
ataacccaaatttaataatttaggttgctccaatttcaatatagtcagcttgaccacgttctt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35031795 |
ataacccaaatttaataatttaggttgctccaatttcaatatagtcagcttgaccacgttctt |
35031733 |
T |
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