View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6127_low_4 (Length: 250)
Name: NF6127_low_4
Description: NF6127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6127_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 3603629 - 3603864
Alignment:
| Q |
1 |
ttgagaccctaatatttttagaagcccaatcatcaaggatgcctctgagatctgtcccaagaaattacactaattgttcaacagtagaatttttaaatta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
3603629 |
ttgagaccctaatatttttagaagcccaatcatcaaggatgcctctgagatctgtcccaagaaattacactaattgttcaacagtagcatttttaaatta |
3603728 |
T |
|
| Q |
101 |
gattgtgtaggtaatc--tctaaatatgaataatataatgtgttgcagattgtattagatacgattaggttacttagatattctatcaaaataggtatat |
198 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
3603729 |
gattgtgtaggtaatcagtctaaatatgaataatataatgtgttgcagattgtattagatacgattaggttacttagatattctatcaaaataggtatat |
3603828 |
T |
|
| Q |
199 |
gcattacttattgttttttaaactcaaccagctatg |
234 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| |
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| T |
3603829 |
gcattacttattgttttttaaactcaaccagctatg |
3603864 |
T |
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