View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6130_low_6 (Length: 248)

Name: NF6130_low_6
Description: NF6130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6130_low_6
NF6130_low_6
[»] scaffold0310 (3 HSPs)
scaffold0310 (7-248)||(6423-6679)
scaffold0310 (74-248)||(129-302)
scaffold0310 (7-91)||(346-430)
[»] chr6 (30 HSPs)
chr6 (74-248)||(31628327-31628500)
chr6 (90-248)||(18777220-18777378)
chr6 (89-248)||(32898863-32899022)
chr6 (74-248)||(16106575-16106748)
chr6 (90-248)||(18570353-18570511)
chr6 (89-248)||(18432716-18432875)
chr6 (74-248)||(16086076-16086249)
chr6 (89-245)||(22441007-22441163)
chr6 (89-248)||(13014725-13014883)
chr6 (7-91)||(18583264-18583348)
chr6 (75-248)||(18398998-18399170)
chr6 (7-89)||(4991002-4991085)
chr6 (7-91)||(18823628-18823712)
chr6 (89-248)||(28195108-28195268)
chr6 (75-226)||(18381720-18381870)
chr6 (7-91)||(18839483-18839567)
chr6 (75-248)||(25367251-25367424)
chr6 (103-248)||(21623255-21623400)
chr6 (121-226)||(21411087-21411191)
chr6 (7-74)||(17083428-17083496)
chr6 (74-150)||(18583376-18583451)
chr6 (90-150)||(26089809-26089869)
chr6 (75-248)||(22361780-22361952)
chr6 (90-150)||(15742341-15742401)
chr6 (90-150)||(23994997-23995057)
chr6 (90-150)||(35015278-35015338)
chr6 (75-215)||(25651297-25651436)
chr6 (90-150)||(18002617-18002677)
chr6 (91-145)||(25744331-25744385)
chr6 (42-83)||(18381924-18381965)
[»] scaffold0075 (1 HSPs)
scaffold0075 (75-248)||(5001-5173)
[»] chr4 (37 HSPs)
chr4 (89-245)||(16732242-16732398)
chr4 (90-248)||(12837215-12837373)
chr4 (74-248)||(45458870-45459043)
chr4 (89-248)||(30457976-30458135)
chr4 (75-248)||(34395317-34395489)
chr4 (89-248)||(44055988-44056146)
chr4 (75-245)||(21959482-21959650)
chr4 (75-248)||(23269949-23270121)
chr4 (89-245)||(53704752-53704907)
chr4 (89-248)||(8872487-8872645)
chr4 (89-248)||(55376613-55376771)
chr4 (91-248)||(44346902-44347058)
chr4 (89-245)||(53907718-53907873)
chr4 (75-248)||(27961031-27961203)
chr4 (152-248)||(20813562-20813658)
chr4 (75-248)||(13809525-13809697)
chr4 (90-248)||(30232512-30232669)
chr4 (75-248)||(15044888-15045060)
chr4 (75-248)||(52265523-52265695)
chr4 (89-164)||(820015-820090)
chr4 (7-89)||(16522748-16522831)
chr4 (75-248)||(15109364-15109536)
chr4 (89-248)||(18494343-18494502)
chr4 (75-226)||(41165983-41166133)
chr4 (7-89)||(9295624-9295707)
chr4 (89-248)||(47535080-47535239)
chr4 (198-248)||(819946-819996)
chr4 (90-150)||(14951836-14951896)
chr4 (94-150)||(5682648-5682704)
chr4 (7-76)||(7186092-7186159)
chr4 (90-150)||(15272433-15272493)
chr4 (35-76)||(7964959-7965000)
chr4 (90-150)||(25119328-25119388)
chr4 (74-148)||(10104380-10104453)
chr4 (75-215)||(18276494-18276633)
chr4 (42-83)||(41166187-41166228)
chr4 (35-83)||(37957266-37957314)
[»] chr3 (66 HSPs)
chr3 (74-248)||(12349554-12349727)
chr3 (89-248)||(54424085-54424244)
chr3 (89-248)||(17100726-17100885)
chr3 (89-248)||(17101411-17101570)
chr3 (97-248)||(8631871-8632022)
chr3 (75-248)||(50112066-50112238)
chr3 (90-248)||(19260854-19261012)
chr3 (76-248)||(14295499-14295671)
chr3 (76-248)||(14301126-14301298)
chr3 (74-248)||(35123755-35123927)
chr3 (89-248)||(14298494-14298653)
chr3 (89-248)||(14304121-14304280)
chr3 (75-248)||(17522904-17523076)
chr3 (89-248)||(22144287-22144446)
chr3 (89-248)||(55440863-55441023)
chr3 (89-248)||(16996075-16996233)
chr3 (89-247)||(317525-317682)
chr3 (74-248)||(53898470-53898643)
chr3 (89-248)||(3578161-3578320)
chr3 (89-245)||(19570707-19570862)
chr3 (93-248)||(34439357-34439513)
chr3 (89-245)||(6146764-6146920)
chr3 (89-245)||(13817585-13817740)
chr3 (89-248)||(6154346-6154505)
chr3 (74-248)||(17938633-17938805)
chr3 (104-235)||(11061033-11061165)
chr3 (89-248)||(16181961-16182119)
chr3 (75-248)||(17139568-17139740)
chr3 (75-214)||(11329010-11329148)
chr3 (7-89)||(7853913-7853995)
chr3 (7-91)||(33341812-33341896)
chr3 (89-224)||(16880196-16880331)
chr3 (7-91)||(19946629-19946713)
chr3 (7-91)||(54685541-54685625)
chr3 (75-237)||(12488752-12488913)
chr3 (128-248)||(38527841-38527960)
chr3 (90-225)||(12560274-12560409)
chr3 (7-83)||(47784988-47785064)
chr3 (89-215)||(39656599-39656725)
chr3 (7-88)||(9303343-9303425)
chr3 (89-248)||(14059228-14059387)
chr3 (119-246)||(11196336-11196456)
chr3 (103-248)||(3576453-3576598)
chr3 (89-159)||(12349834-12349904)
chr3 (75-156)||(14528118-14528199)
chr3 (90-150)||(3992624-3992684)
chr3 (90-150)||(38167988-38168048)
chr3 (90-150)||(2844265-2844325)
chr3 (90-150)||(16261527-16261587)
chr3 (90-150)||(30153016-30153076)
chr3 (89-248)||(30207289-30207448)
chr3 (90-150)||(53771115-53771175)
chr3 (90-150)||(54685422-54685482)
chr3 (153-248)||(47784781-47784876)
chr3 (34-76)||(1990759-1990801)
chr3 (103-248)||(17191628-17191773)
chr3 (90-150)||(33341955-33342015)
chr3 (90-150)||(7854056-7854116)
chr3 (90-146)||(17956109-17956165)
chr3 (90-150)||(23492447-23492507)
chr3 (94-150)||(45581709-45581765)
chr3 (153-248)||(17204818-17204913)
chr3 (35-76)||(34559857-34559898)
chr3 (29-76)||(12952915-12952963)
chr3 (35-83)||(17960554-17960602)
chr3 (94-150)||(54038245-54038301)
[»] scaffold0035 (2 HSPs)
scaffold0035 (75-248)||(117978-118150)
scaffold0035 (75-248)||(109477-109649)
[»] chr7 (37 HSPs)
chr7 (75-248)||(11287477-11287649)
chr7 (74-248)||(7284075-7284248)
chr7 (75-248)||(26070279-26070451)
chr7 (75-248)||(26094066-26094238)
chr7 (75-248)||(12369855-12370027)
chr7 (90-245)||(3895099-3895254)
chr7 (74-248)||(15822447-15822619)
chr7 (75-248)||(16570020-16570193)
chr7 (75-248)||(16595469-16595642)
chr7 (90-248)||(12248135-12248294)
chr7 (89-248)||(45452183-45452340)
chr7 (89-248)||(12759060-12759219)
chr7 (89-248)||(13862944-13863104)
chr7 (89-248)||(143712-143871)
chr7 (89-248)||(44865303-44865463)
chr7 (89-248)||(47289854-47290013)
chr7 (75-248)||(49047689-49047861)
chr7 (90-245)||(35094890-35095044)
chr7 (89-245)||(39046646-39046797)
chr7 (7-91)||(7284292-7284376)
chr7 (75-248)||(13377589-13377761)
chr7 (75-248)||(17223953-17224125)
chr7 (90-150)||(3049657-3049717)
chr7 (75-248)||(13274847-13275009)
chr7 (7-76)||(14272134-14272203)
chr7 (90-150)||(111390-111450)
chr7 (90-150)||(126489-126549)
chr7 (90-150)||(2028995-2029055)
chr7 (90-150)||(2190307-2190367)
chr7 (90-150)||(42056410-42056470)
chr7 (75-248)||(9838939-9839111)
chr7 (103-187)||(16919646-16919730)
chr7 (94-150)||(32494167-32494223)
chr7 (75-248)||(48356704-48356876)
chr7 (42-83)||(17224179-17224220)
chr7 (35-76)||(48356602-48356643)
chr7 (35-75)||(16915177-16915217)
[»] scaffold0338 (1 HSPs)
scaffold0338 (75-248)||(9047-9219)
[»] chr1 (23 HSPs)
chr1 (74-248)||(9784079-9784249)
chr1 (74-248)||(21718287-21718460)
chr1 (90-248)||(35054830-35054988)
chr1 (75-248)||(49967710-49967882)
chr1 (94-248)||(22403125-22403279)
chr1 (89-248)||(41212145-41212303)
chr1 (90-248)||(27329771-27329928)
chr1 (74-150)||(35522432-35522507)
chr1 (75-248)||(51627679-51627851)
chr1 (183-248)||(35522367-35522432)
chr1 (108-248)||(20177267-20177407)
chr1 (89-248)||(16645985-16646144)
chr1 (89-248)||(16656711-16656870)
chr1 (90-150)||(15861547-15861607)
chr1 (75-248)||(37233875-37234047)
chr1 (94-150)||(21860089-21860145)
chr1 (90-150)||(44035092-44035152)
chr1 (35-92)||(27674755-27674812)
chr1 (35-83)||(19603055-19603103)
chr1 (90-150)||(22367093-22367152)
chr1 (74-125)||(9784238-9784288)
chr1 (36-83)||(22829665-22829712)
chr1 (35-83)||(38033914-38033962)
[»] scaffold0012 (1 HSPs)
scaffold0012 (89-248)||(253004-253163)
[»] scaffold0190 (1 HSPs)
scaffold0190 (74-248)||(9996-10169)
[»] scaffold0022 (4 HSPs)
scaffold0022 (75-248)||(112560-112732)
scaffold0022 (75-247)||(109650-109821)
scaffold0022 (89-248)||(102937-103096)
scaffold0022 (35-83)||(103163-103211)
[»] scaffold0117 (1 HSPs)
scaffold0117 (74-248)||(11583-11756)
[»] scaffold0014 (2 HSPs)
scaffold0014 (75-245)||(85392-85561)
scaffold0014 (75-248)||(159359-159532)
[»] chr2 (30 HSPs)
chr2 (74-248)||(271229-271402)
chr2 (75-248)||(25602084-25602256)
chr2 (89-245)||(36890703-36890859)
chr2 (74-248)||(4448148-4448321)
chr2 (75-248)||(28974109-28974281)
chr2 (75-245)||(32465918-32466086)
chr2 (127-248)||(27261915-27262035)
chr2 (89-248)||(23836720-23836879)
chr2 (91-248)||(25875935-25876091)
chr2 (7-83)||(19433573-19433649)
chr2 (75-245)||(24571310-24571479)
chr2 (75-248)||(68052-68224)
chr2 (89-248)||(22579877-22580033)
chr2 (7-89)||(24826961-24827044)
chr2 (7-89)||(25212977-25213061)
chr2 (89-248)||(31146196-31146354)
chr2 (7-69)||(43645824-43645886)
chr2 (75-248)||(43645953-43646125)
chr2 (89-156)||(6879510-6879577)
chr2 (90-150)||(22274796-22274856)
chr2 (90-150)||(22284029-22284089)
chr2 (35-92)||(3472-3529)
chr2 (34-75)||(24884643-24884684)
chr2 (90-146)||(21274174-21274230)
chr2 (89-248)||(22775220-22775379)
chr2 (89-248)||(22780598-22780757)
chr2 (90-146)||(9653021-9653077)
chr2 (75-143)||(19433452-19433519)
chr2 (43-83)||(24571532-24571572)
chr2 (89-187)||(25305518-25305617)
[»] scaffold0359 (2 HSPs)
scaffold0359 (74-246)||(1376-1547)
scaffold0359 (89-248)||(11668-11828)
[»] chr8 (31 HSPs)
chr8 (89-248)||(20561646-20561805)
chr8 (74-248)||(20573207-20573380)
chr8 (75-248)||(20481665-20481837)
chr8 (89-224)||(20653944-20654079)
chr8 (89-248)||(37611741-37611900)
chr8 (75-248)||(41246718-41246889)
chr8 (89-210)||(20647882-20648003)
chr8 (89-248)||(21681075-21681235)
chr8 (89-248)||(19993070-19993228)
chr8 (89-248)||(22234819-22234977)
chr8 (75-248)||(39446781-39446953)
chr8 (94-248)||(22981351-22981505)
chr8 (75-248)||(38533709-38533881)
chr8 (75-248)||(23837258-23837430)
chr8 (75-248)||(21198167-21198339)
chr8 (192-245)||(25122618-25122671)
chr8 (153-248)||(17285341-17285436)
chr8 (75-248)||(26011554-26011726)
chr8 (90-150)||(274517-274577)
chr8 (90-150)||(641272-641332)
chr8 (90-150)||(827078-827138)
chr8 (90-150)||(16039002-16039062)
chr8 (90-150)||(41506930-41506990)
chr8 (90-150)||(39115349-39115409)
chr8 (75-248)||(5854674-5854846)
chr8 (90-150)||(24716983-24717043)
chr8 (75-248)||(15933358-15933530)
chr8 (35-76)||(5854572-5854613)
chr8 (35-76)||(15933256-15933297)
chr8 (75-215)||(29306477-29306616)
chr8 (35-83)||(22736079-22736127)
[»] scaffold0008 (1 HSPs)
scaffold0008 (75-248)||(22751-22923)
[»] chr5 (34 HSPs)
chr5 (75-248)||(1168219-1168391)
chr5 (74-248)||(24183147-24183320)
chr5 (75-248)||(11337201-11337373)
chr5 (75-248)||(20712136-20712308)
chr5 (89-248)||(21397165-21397324)
chr5 (89-248)||(19405610-19405770)
chr5 (89-248)||(4865336-4865494)
chr5 (90-248)||(11584125-11584286)
chr5 (89-248)||(28261594-28261748)
chr5 (89-248)||(24475653-24475809)
chr5 (89-248)||(21646755-21646913)
chr5 (75-248)||(3673922-3674094)
chr5 (76-248)||(21906778-21906931)
chr5 (8-91)||(11583982-11584065)
chr5 (7-89)||(16105573-16105656)
chr5 (103-248)||(19862296-19862441)
chr5 (75-215)||(7728480-7728619)
chr5 (75-247)||(23493979-23494150)
chr5 (7-89)||(109075-109158)
chr5 (91-248)||(5450858-5451015)
chr5 (90-150)||(21650769-21650829)
chr5 (89-248)||(16595581-16595739)
chr5 (75-248)||(432523-432695)
chr5 (89-248)||(28902264-28902423)
chr5 (89-248)||(28938659-28938818)
chr5 (90-150)||(2031884-2031944)
chr5 (90-150)||(11342759-11342819)
chr5 (90-150)||(21205000-21205060)
chr5 (75-248)||(21222623-21222795)
chr5 (8-46)||(24225596-24225634)
chr5 (75-248)||(21617076-21617248)
chr5 (75-117)||(23466517-23466558)
chr5 (35-81)||(32966390-32966436)
chr5 (137-240)||(23466558-23466660)
[»] scaffold0160 (1 HSPs)
scaffold0160 (75-246)||(81-251)
[»] scaffold0120 (4 HSPs)
scaffold0120 (94-248)||(21590-21743)
scaffold0120 (89-248)||(31284-31442)
scaffold0120 (7-83)||(21442-21518)
scaffold0120 (7-83)||(31141-31217)
[»] scaffold0037 (2 HSPs)
scaffold0037 (90-248)||(24743-24901)
scaffold0037 (90-150)||(95049-95109)
[»] scaffold0025 (2 HSPs)
scaffold0025 (90-248)||(146675-146833)
scaffold0025 (90-215)||(53420-53545)
[»] scaffold0021 (5 HSPs)
scaffold0021 (75-245)||(132268-132437)
scaffold0021 (90-248)||(88349-88507)
scaffold0021 (75-248)||(11747-11920)
scaffold0021 (139-248)||(16022-16131)
scaffold0021 (139-248)||(25553-25662)
[»] scaffold0610 (1 HSPs)
scaffold0610 (75-248)||(591-763)
[»] scaffold0103 (1 HSPs)
scaffold0103 (75-248)||(33722-33894)
[»] scaffold0031 (3 HSPs)
scaffold0031 (89-248)||(70686-70845)
scaffold0031 (89-248)||(31117-31275)
scaffold0031 (89-215)||(97246-97372)
[»] scaffold1164 (1 HSPs)
scaffold1164 (90-248)||(1455-1613)
[»] scaffold0001 (2 HSPs)
scaffold0001 (74-248)||(60865-61038)
scaffold0001 (92-248)||(70636-70793)
[»] scaffold0396 (1 HSPs)
scaffold0396 (75-245)||(11726-11895)
[»] scaffold0673 (2 HSPs)
scaffold0673 (89-248)||(837-996)
scaffold0673 (89-241)||(6867-7019)
[»] scaffold0044 (1 HSPs)
scaffold0044 (89-248)||(38371-38530)
[»] scaffold1867 (2 HSPs)
scaffold1867 (74-248)||(203-376)
scaffold1867 (7-91)||(75-159)
[»] scaffold0480 (3 HSPs)
scaffold0480 (75-248)||(8897-9069)
scaffold0480 (75-248)||(5262-5433)
scaffold0480 (50-83)||(9123-9156)
[»] scaffold0240 (1 HSPs)
scaffold0240 (75-238)||(7629-7791)
[»] scaffold0447 (2 HSPs)
scaffold0447 (75-248)||(4623-4796)
scaffold0447 (75-248)||(9237-9410)
[»] scaffold0011 (2 HSPs)
scaffold0011 (74-245)||(254832-255002)
scaffold0011 (74-245)||(261438-261608)
[»] scaffold0383 (1 HSPs)
scaffold0383 (104-248)||(7260-7405)
[»] scaffold0158 (3 HSPs)
scaffold0158 (89-248)||(25031-25190)
scaffold0158 (89-248)||(25284-25443)
scaffold0158 (7-91)||(24890-24974)
[»] scaffold0068 (2 HSPs)
scaffold0068 (89-248)||(48220-48378)
scaffold0068 (89-248)||(61668-61826)
[»] scaffold0554 (1 HSPs)
scaffold0554 (75-248)||(1976-2148)
[»] scaffold0077 (1 HSPs)
scaffold0077 (89-248)||(15486-15645)
[»] scaffold0034 (3 HSPs)
scaffold0034 (90-245)||(46239-46395)
scaffold0034 (90-248)||(40732-40891)
scaffold0034 (94-150)||(79942-79998)
[»] scaffold0016 (3 HSPs)
scaffold0016 (91-248)||(164290-164446)
scaffold0016 (90-150)||(162299-162359)
scaffold0016 (90-150)||(166385-166445)
[»] scaffold0083 (1 HSPs)
scaffold0083 (89-248)||(14947-15105)
[»] scaffold0342 (2 HSPs)
scaffold0342 (75-248)||(6000-6174)
scaffold0342 (90-150)||(572-632)
[»] scaffold0049 (1 HSPs)
scaffold0049 (119-245)||(20275-20402)
[»] scaffold0095 (1 HSPs)
scaffold0095 (75-248)||(33743-33915)
[»] scaffold0740 (1 HSPs)
scaffold0740 (89-248)||(4358-4516)
[»] scaffold0833 (2 HSPs)
scaffold0833 (7-91)||(3230-3314)
scaffold0833 (74-116)||(3358-3399)
[»] scaffold0092 (1 HSPs)
scaffold0092 (89-248)||(3392-3551)
[»] scaffold0150 (3 HSPs)
scaffold0150 (7-76)||(28466-28535)
scaffold0150 (7-57)||(21637-21687)
scaffold0150 (109-248)||(28629-28768)
[»] scaffold0195 (1 HSPs)
scaffold0195 (76-163)||(618-704)
[»] scaffold0028 (2 HSPs)
scaffold0028 (7-89)||(130486-130569)
scaffold0028 (76-148)||(89584-89655)
[»] scaffold0122 (2 HSPs)
scaffold0122 (176-245)||(19972-20041)
scaffold0122 (176-245)||(24276-24345)
[»] scaffold0162 (1 HSPs)
scaffold0162 (89-248)||(7040-7199)
[»] scaffold0053 (2 HSPs)
scaffold0053 (75-248)||(76862-77034)
scaffold0053 (42-83)||(77088-77129)
[»] scaffold0013 (1 HSPs)
scaffold0013 (89-246)||(35551-35708)
[»] scaffold0243 (1 HSPs)
scaffold0243 (76-248)||(2331-2502)
[»] scaffold0091 (2 HSPs)
scaffold0091 (89-157)||(32276-32344)
scaffold0091 (89-157)||(41959-42027)
[»] scaffold0589 (1 HSPs)
scaffold0589 (137-248)||(7927-8037)
[»] scaffold0483 (2 HSPs)
scaffold0483 (89-248)||(6734-6893)
scaffold0483 (38-83)||(6622-6667)
[»] scaffold0234 (1 HSPs)
scaffold0234 (90-150)||(17525-17585)
[»] scaffold0032 (3 HSPs)
scaffold0032 (90-150)||(55655-55715)
scaffold0032 (142-248)||(93788-93893)
scaffold0032 (35-83)||(94013-94061)
[»] scaffold0700 (1 HSPs)
scaffold0700 (75-248)||(2585-2757)
[»] scaffold0706 (1 HSPs)
scaffold0706 (90-150)||(6664-6724)
[»] scaffold0686 (1 HSPs)
scaffold0686 (90-150)||(6204-6264)
[»] scaffold0597 (1 HSPs)
scaffold0597 (90-150)||(1099-1159)
[»] scaffold0251 (2 HSPs)
scaffold0251 (90-150)||(13507-13567)
scaffold0251 (90-150)||(21481-21541)
[»] scaffold0184 (1 HSPs)
scaffold0184 (90-150)||(31401-31461)
[»] scaffold0175 (1 HSPs)
scaffold0175 (90-150)||(15023-15083)
[»] scaffold0078 (1 HSPs)
scaffold0078 (90-150)||(41383-41443)
[»] scaffold0231 (1 HSPs)
scaffold0231 (10-67)||(12990-13048)
[»] scaffold0006 (1 HSPs)
scaffold0006 (75-248)||(197268-197440)
[»] scaffold0465 (1 HSPs)
scaffold0465 (90-143)||(10094-10147)
[»] scaffold0574 (1 HSPs)
scaffold0574 (90-150)||(9628-9688)
[»] scaffold0009 (1 HSPs)
scaffold0009 (75-248)||(69517-69689)
[»] scaffold1272 (1 HSPs)
scaffold1272 (38-83)||(270-315)
[»] scaffold0080 (1 HSPs)
scaffold0080 (35-76)||(44046-44087)
[»] scaffold0039 (1 HSPs)
scaffold0039 (94-150)||(12641-12697)
[»] scaffold0017 (1 HSPs)
scaffold0017 (7-47)||(12694-12734)
[»] scaffold0090 (1 HSPs)
scaffold0090 (7-42)||(3392-3427)
[»] scaffold0004 (2 HSPs)
scaffold0004 (90-150)||(186647-186706)
scaffold0004 (90-150)||(193609-193668)
[»] scaffold0816 (1 HSPs)
scaffold0816 (216-245)||(3083-3112)


Alignment Details
Target: scaffold0310 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 248
Target Start/End: Complemental strand, 6679 - 6423
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaac---------------catgaat 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||                ||| |||    
6679 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaagaacaactcaattctcaacaacaagacatatcaataacaacatcaat 6580  T
92 tgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgat 191  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  |    
6579 tgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcatattttcaacatataccaacttctcatactttgaacatgtatt 6480  T
192 tcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
6479 tcaactaacaacaatccaattatccataacttcatacatccaaacatgtcatcataa 6423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 302 - 129
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || |||||||||| |||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
302 tcaacaacaac-atcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcatattttcaacatataccaacttctc 204  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
203 atactttgaacatgtatttcaactaacaacaatccaattatccataacttcatacatctaaacatgtcatcataa 129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 430 - 346
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||    
430 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaaaagctcatttctcaacaacaatcatgaat 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 31628327 - 31628500
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
31628327 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcaacatataccaacttctc 31628425  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
31628426 atactttgaacatgtaattcaactaacaacaattcaattatcaataacttcatacatctaaacatgtaatcataa 31628500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 18777220 - 18777378
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||| ||||| | || |||||||||||||||||     
18777220 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacatattttcaacacatacccatttttcatactttgaacatgta 18777319  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
18777320 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 18777378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 32898863 - 32899022
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||    
32898863 aattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgt 32898962  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
32898963 aattcaactaacaacaattcaattattcataacttcatacatctaaacatgtcatcataa 32899022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 16106575 - 16106748
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || || |||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||| ||||  | || ||    
16106575 tcaacaacaac-atcaaatgatcatgaaacttatcacaattcaacaacaacaaggtataattcaccaattaagcatattttcaacacatactcatttttc 16106673  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
16106674 atactttgaacatgtaattcaaccaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 16106748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 18570353 - 18570511
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
18570353 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 18570452  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
18570453 atttaactaataacaattcaattatccataacatcatacatctaaacatgtcatcataa 18570511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 18432716 - 18432875
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| | || ||||||||| |||||||    
18432716 aattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcaacatacacccatttttcatacttttaacatgt 18432815  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
18432816 aattcaatcaacaacaattcaagtattcataacttcatacatctaaacatgtcatcataa 18432875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 16086076 - 16086249
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || || |||||||||||||||||| ||||||| |||||||| | |||||||||||||| ||||||||||||||| ||||| | || ||    
16086076 tcaacaacaac-atcaaatgatcatgaaacttatcataattcaacaacaacaaggtataattcaccaattaagcatattttcaacacatacccatttttc 16086174  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
16086175 gtactttgaacatgtaattcaacaaacaacaattcaattatccataacttcatacatctaaacatatcatcataa 16086249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 89 - 245
Target Start/End: Original strand, 22441007 - 22441163
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||||||  ||||| | || ||||||||| |||||||    
22441007 aattgatcatgaaacttatcacaaatcatgaacaacaatgcataattcaccaattgagcatattttcaactcatacccatttttcatacttttaacatgt 22441106  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
     ||||| |  |  ||||||||||||| ||||||||||||||||||||||||||||||    
22441107 aattcaccccatcacaattcaattattcataacttcatacatctaaacatgtcatca 22441163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 13014883 - 13014725
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||| |||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||||  ||||| | || ||||||||  |||||      
13014883 aattgatcttgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatatttccaactcatacccatttttcatacttc-aacatac 13014785  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
13014784 aattcaactaacaacaattcaatcattcataacttcatacatctaaacatgtcatcataa 13014725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 18583264 - 18583348
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
18583264 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaat 18583348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 18398998 - 18399170
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| ||||||||||| ||| ||||||||| ||||||||||||| |  |||||    
18398998 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatatactattttctc 18399095  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||   |||||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
18399096 atactttgaacatgaaatttctctaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 18399170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 4991002 - 4991085
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatga 89  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
4991002 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 4991085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 18823712 - 18823628
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||  |||||||||||||||| ||||||| |||||||    
18823712 acatcatcaaaatcaaacttcttctttatcaagccattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaat 18823628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 28195268 - 28195108
Alignment:
89 aattgatcatgaaa-cttatcacaattcaataacaacaaagcataattcacc-aattgagcatattttcaacatataccaacttctcatactttgaacat 186  Q
    |||||||||| ||| || |||||||||||| |||| ||  |||||||||| | ||||||||| |||| || |||||||||  |||||||||| |||||||    
28195268 aattgatcataaaatctcatcacaattcaacaacatcatggcataattcaactaattgagcacattt-catcatataccattttctcatactatgaacat 28195170  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |  |||  ||||||||||||||||||||| | ||||||||||||  |||||| |||||||||    
28195169 gaaattttactaacaacaattcaattatcaacaacttcatacattcaaacatatcatcataa 28195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 18381870 - 18381720
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||  ||||||||||||||| ||||||||||||||||||| ||| || ||||||  ||||||||||| ||  |||||    
18381870 caacaacaac-atcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaacaatttaagcata-attcaacatatatcactttctc 18381773  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 226  Q
    ||||||||||||||  |||  || |||||| ||||||||||| | ||||||||    
18381772 atactttgaacatgaaatttcaccaacaaccattcaattatcaacaacttcat 18381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 18839567 - 18839483
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| |||||||||||| || ||||| |||||||||||||||||  |||||||||||||||| ||||||| |||||||    
18839567 acatcatcaaaatcaaacttcttctttttcaactcattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaat 18839483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 25367424 - 25367251
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| | || |||||| ||| ||||||||| |||||||||| ||||  |||||    
25367424 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacataacacaattcaacaatttgagcata-tttcaacataaaccactttctc 25367327  T
174 atactttgaacatgtgattcaactaacaacaattcaattatc-cataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||   ||||||||||||| ||||||  | ||||||||||||  ||||||  ||||||||    
25367326 atactttgaacatgaaatttctctaacaacaattccattatcaaaaaacttcatacattcaaacataacatcataa 25367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 21623255 - 21623400
Alignment:
103 cttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 201  Q
    |||| |||||||||| ||||||| ||||||||||| ||| |||||||||  ||||||||||| ||  |||||||||||||||||||  |||  |  ||||    
21623255 cttaccacaattcaacaacaacatagcataattcaacaatttgagcata-attcaacatatatcactttctcatactttgaacatgaaatttcagcaaca 21623353  T
202 acaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| | |||||||| |||  ||||||  ||||||||    
21623354 acaattcaattatcaacaacttcatgcattcaaacataccatcataa 21623400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 21411191 - 21411087
Alignment:
121 caacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataa 220  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||||  |||||||||||||||||||  ||| |  ||||||| ||||||||||| | ||    
21411191 caacatagcataattcacaatttgagcatattt-caacatataccactttctcatactttgaacatgaaatttatttaacaaccattcaattatcaacaa 21411093  T
221 cttcat 226  Q
    ||||||    
21411092 cttcat 21411087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 17083496 - 17083428
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccaccgacaacaactcatttct 74  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| || | ||||||||||||||||    
17083496 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaaaacaacaacaacaactcatttct 17083428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 18583376 - 18583451
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    ||||||||||| || ||||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
18583376 tcaacaacaac-atcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 18583451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 26089809 - 26089869
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
26089809 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 26089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 22361952 - 22361780
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| ||||||  | |||||||||||| ||||||| ||||||||||| ||| |||||||||  |||||| |||  ||  |||||    
22361952 caacaacaac-atcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatttgagcata-attcaacttatgtcactttctc 22361855  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  |  |||||||||||||||||| | || ||||| |||  |||||| |||||||||    
22361854 atactttgaacatgaaatttcagcaacaacaattcaattatcaacaatttcatgcattcaaacatatcatcataa 22361780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 15742401 - 15742341
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
15742401 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15742341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 23994997 - 23995057
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
23994997 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 23995057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 35015338 - 35015278
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
35015338 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 35015278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 25651297 - 25651436
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| |||| |||||| || || ||||||| || ||||||||| ||  ||| |    
25651297 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaacatttagagcataatt-caacatataacactttcac 25651394  T
174 atactttgaacatgtgattcaactaacaacaattcaattatc 215  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
25651395 atactttgaacatgcaatttcaccaacaacaattcaattatc 25651436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 18002677 - 18002617
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||| ||||||||||||    
18002677 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcatcaattgagcata 18002617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 25744385 - 25744331
Alignment:
91 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattga 145  Q
    ||||||||||||| ||||||||||||  |||||||| ||||||||||||| ||||    
25744385 ttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 18381965 - 18381924
Alignment:
42 attttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||| ||||||||||| |||||||||||||||||| ||||||    
18381965 atttcacaaaaccaccaacaacaactcatttctcatcaacaa 18381924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 5001 - 5173
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
5001 caacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaattaagcatattttcaacatataccaacttctca 5099  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
5100 tactgtgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 5173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 5e-74; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 89 - 245
Target Start/End: Original strand, 16732242 - 16732398
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16732242 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 16732341  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16732342 aattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 16732398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 12837373 - 12837215
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    ||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
12837373 attgaccatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttcaacatataccaatttctcatactttgaacatgta 12837274  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
12837273 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 12837215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 45459043 - 45458870
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| || ||||||||| ||||||||    
45459043 tcaacaacaac-atcaattggtcatgaaacttatcacaattcaacaacagcaaagcataattcaccaattgaacatatctttaacatatacaaacttctc 45458945  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
45458944 atattttgagcatgtaattcaactaacaacaattcaattatctatcacttcatacatctaaacatgtcatcataa 45458870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 30457976 - 30458135
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||||| ||||| | ||  ||||||||||||||||    
30457976 aattgatcatgaaacttatcacaattcatcaacaacaatgcgtaattcaccaattgagcatattttcaacacatacccattttacatactttgaacatgt 30458075  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||    
30458076 aattcaaccaacaacaatttaattatccataacttcatacatctaaacatgacatcataa 30458135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 34395317 - 34395489
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || |||    
34395317 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttca 34395414  T
175 t--actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |  ||||||||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
34395415 tacactttgaacatgtaattcaactaac-acaattcaattattcattacttcatacatctaaacatgtcatcataa 34395489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 44055988 - 44056146
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| |||   | || |||||||||||||||||    
44055988 aattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcatattttcaacacatattcatttttcatactttgaacatgt 44056087  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
44056088 aattcaactaacaacaattcaa-aattcataacttcatacatctaaacatgtcatcataa 44056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 75 - 245
Target Start/End: Complemental strand, 21959650 - 21959482
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| | || |||    
21959650 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatttttca 21959552  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    ||||||| | |||| ||||||  ||||||||||||| ||||||||||||||||||| ||||||||||||||    
21959551 tactttg-agatgtaattcaatcaacaacaattcaaatatccataacttcatacatttaaacatgtcatca 21959482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 23270121 - 23269949
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || |||||||||||| |||||||||||||||  |||||||| |||||||||| |||||||| |||||||||||| ||||| | || |||    
23270121 caacaacaac-atcaattgatcatgatacttatcacaattcatcaacaacaatgcataattcatcaattgagtatattttcaacacataccca-ttttca 23270024  T
175 t--actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |  ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
23270023 tacactttgaacatgtaattcaactaac-acaattcaattattcataacttcatacatctaaacatgtcatcataa 23269949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 53704907 - 53704752
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| ||||||||||||  |||||| | ||||||||||||||||||||||||||||| || ||||| | || |||||||||||||||      
53704907 aattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcatattttca-cacatacccatttttcatactttgaacatac 53704809  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
     |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
53704808 aattcaactaacaacaattcaatcattcataacttcatacatctaaacatgtcatca 53704752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 8872645 - 8872487
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || |||||||||||||||      
8872645 aattgatcatgaaacatatcacaattcatcaacaacaacgcataattcaccaattgagcatattttc-acacatacccatttttcatactttgaacatac 8872547  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||    
8872546 aattcaactaacaacacttcaatcattcatagcttcatacatctaaacatgtcatcataa 8872487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 55376771 - 55376613
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||| ||||||||| || ||||| | || |||||||| ||||||      
55376771 aattgatcatgaaacttatcacaattcatcaacaacaatgtataattcaccaattgagtatattttca-cacatacccatttttcatacttagaacatac 55376673  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
55376672 aattcaactaacaacaattcaatcattcataacttcatacatctaaacatgtcatcataa 55376613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 91 - 248
Target Start/End: Original strand, 44346902 - 44347058
Alignment:
91 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaactt-ctcatactttgaacatgtg 189  Q
    ||||||||||||| ||||||||||||  |||||||| | ||||||||||||||||||||||||||| || ||||| | || || | |||||||||||||     
44346902 ttgatcatgaaacatatcacaattcatgaacaacaatgtataattcaccaattgagcatattttca-cacatacccattttcttacactttgaacatgta 44347000  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
44347001 attcaactaaca-caattcaattattcataacttcatacatctaaacatgtcatcataa 44347058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 53907873 - 53907718
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| | ||||||||||  |||||||| ||||||||||||||||| ||||||||||| || ||||| | || |||||||||||||||      
53907873 aattgatcatgaaacatttcacaattcatcaacaacaatgcataattcaccaattgggcatattttca-cacatacccatttttcatactttgaacatac 53907775  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
     || ||||||| ||||||||||| || ||||||||||||||||||||||||||||||    
53907774 aatccaactaataacaattcaatcattcataacttcatacatctaaacatgtcatca 53907718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 27961031 - 27961203
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttc-t 172  Q
    |||||||||| || ||||||||||||| ||||| ||||||||| ||||| | | ||||||||| |||||| ||||||||| ||||||||||| ||||| |    
27961031 caacaacaac-atcaattgatcatgaatcttataacaattcaacaacaatataacataattcaaccaatttagcatattt-caacatatacc-acttctt 27961127  T
173 catactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||||  |||| |||||||||||||||||||| ||||||||||| |||  ||||||||||||||||    
27961128 catactttgaacatgaaattccactaacaacaattcaattattcataacttcatgcattcaaacatgtcatcataa 27961203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 20813658 - 20813562
Alignment:
152 tttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||| ||||| | || ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
20813658 tttcaacacatacccatttttcatactttgaacatgtaattcaaccaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 20813562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 13809697 - 13809525
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| |||||||||| || ||||||||||| |||||||||||||||  |||||    
13809697 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaactaattgagcata-tttcaacatataccattttctc 13809600  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  ||   || |||||||||||||||| | | |||||||| |||  |||||| |||||||||    
13809599 atactttgaacatgaaatctcaccaacaacaattcaattaccaacaacttcatgcattcaaacatatcatcataa 13809525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 30232669 - 30232512
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaac--ttctcatactttgaacatg 187  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  ||| |||||||||| ||||    
30232669 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttc-acata-acccacttttcacatactttgatcatg 30232572  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || ||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
30232571 aagtttcaccaacaacaattcaattat-cataacttcatatatacaaacatgtcatcataa 30232512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 15044888 - 15045060
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||    
15044888 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcatcaatttgagcataatt-caacatatatcactttctc 15044985  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
15044986 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 15045060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 52265695 - 52265523
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| |||||||  |||||||||| ||| ||||||||| |||||||||||||||  |||||    
52265695 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacattgcataattcaacaatttgagcata-tttcaacatataccactttctc 52265598  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||   |||   |||||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
52265597 atactttgaacataaaatttctctaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 52265523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 820090 - 820015
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatatac 164  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||    
820090 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatac 820015  T

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Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 16522748 - 16522831
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatga 89  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
16522748 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 16522831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 15109536 - 15109364
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||||| ||| ||| || ||||||||| ||  |||||    
15109536 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttatcaatttgagtataatt-caacatatatcactttctc 15109439  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
15109438 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 15109364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 18494502 - 18494343
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatatacca-acttctcatactttgaacat 186  Q
    ||||||||||||| |||| |||||||||| ||||||| ||||| || | |||||||||||| | |||||||||||||||   |||||||||||||| |||    
18494502 aattgatcatgaatcttaacacaattcaacaacaacatagcatcatccaaccaattgagcaca-tttcaacatataccatttttctcatactttgatcat 18494404  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |   ||  || ||||||||||||||||| |||||||||||||||   |||||||||||||||    
18494403 gaagtttcaccaacaacaattcaattat-cataacttcatacatacgaacatgtcatcataa 18494343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 41166133 - 41165983
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||  |||  |||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||    
41166133 caacaacaac-atcaattgaacatgactcttgccacaattcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctc 41166036  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 226  Q
    ||||||||||||||  |||  ||||||||||||||||||||| | ||||||||    
41166035 atactttgaacatgaaatttcactaacaacaattcaattatcaacaacttcat 41165983  T

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Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 9295624 - 9295707
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatga 89  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||||| |||||    
9295624 acatcatcaaaatcaaacttcttctttatcaactcattttacataaccaccaacaacaactcattttctcaacaacaatcatga 9295707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 47535239 - 47535080
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||  ||||||| ||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||| ||  |||||||||||||||| ||    
47535239 aattgaacatgattcttatcataattcaacaacaacatagcataattcatcaatttgagcatattt-caacatatatcactttctcatactttgaacttg 47535141  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||  || ||||||||||||||||||   || ||||| |||  |||||| |||||||||    
47535140 aaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataa 47535080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 819996 - 819946
Alignment:
198 aacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
819996 aacaacaattcaattatccataacttcatacatctaaacatgtcaccataa 819946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 14951836 - 14951896
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
14951836 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 14951896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 5682704 - 5682648
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
5682704 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 5682648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 7186159 - 7186092
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||   |||||||||||| |||||    
7186159 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaaaaca---acaacaactcatatctca 7186092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 15272493 - 15272433
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||| ||||||||||||  |||||| | |||||||||||||||||||||||    
15272493 attgatcatggaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15272433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 7965000 - 7964959
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
7965000 tcaacccattttacaaaaccaacaacaacaactcatttctca 7964959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 25119388 - 25119328
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  || ||| | |||||||||||||||||| ||||    
25119388 attgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattgatcata 25119328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 10104453 - 10104380
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagca 148  Q
    ||||||||||| || |||||| |||||| | |||| |||||||| ||||||  |||| |||||||||||||||||    
10104453 tcaacaacaac-atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagca 10104380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 18276494 - 18276633
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||| | |||| |||||| || || |||||||  ||||||||||| ||  ||| |    
18276494 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaatatagcacaattcaacatttagagcata-attcaacatataacactttcac 18276591  T
174 atactttgaacatgtgattcaactaacaacaattcaattatc 215  Q
    || |||||||||||  |||  || |||||||||| |||||||    
18276592 atgctttgaacatgcaatttcaccaacaacaatttaattatc 18276633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 41166228 - 41166187
Alignment:
42 attttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||| ||||||||||| |||||||||||||||||| ||||||    
41166228 atttcacaaaaccacccacaacaactcatttctcatcaacaa 41166187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 37957314 - 37957266
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||||  |||| |||||||||||||| ||| ||||||    
37957314 tcaacccattttacaaagtcaccaacaacaactcatttatcatcaacaa 37957266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 8e-73; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 12349727 - 12349554
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
12349727 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatataacaacttctc 12349629  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
12349628 acactttgaacatgtaattcaactaacaacaattcaattatccataaatttatacatctaaacatgtcatcataa 12349554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 54424085 - 54424244
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
54424085 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatatatcaatttctcatactttgaacatgt 54424184  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
54424185 aattcaactaaccacaattcaattatccataacttcatacatctaaacatggcatcataa 54424244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 17100726 - 17100885
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| |  | |||||||||||||||||    
17100726 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatgtttcatactttgaacatgt 17100825  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
17100826 aattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 17100885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 17101411 - 17101570
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| |  | |||||||||||||||||    
17101411 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatgtttcatactttgaacatgt 17101510  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
17101511 aattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 17101570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 97 - 248
Target Start/End: Original strand, 8631871 - 8632022
Alignment:
97 atgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaac 196  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
8631871 atgaaacttatcacaatccaacaacaacaaagcataattcactaaataagcatattttcaacatataccaacttctcaaactttgaacatgtaattcaac 8631970  T
197 taacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
8631971 taacaacaattcaattatccataacttcatacatccaaacatgtcatcataa 8632022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 50112238 - 50112066
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || |||    
50112238 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccatttttca 50112140  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||    
50112139 tactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatggcatcataa 50112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 19261012 - 19260854
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||||||  || |||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
19261012 attgatcatgaaacttatcacaattcatcaacaacttagtataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 19260913  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
19260912 attcaactaacaacaattcaattatccataacttcatacatctaaacatatcatcataa 19260854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 248
Target Start/End: Original strand, 14295499 - 14295671
Alignment:
76 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctca 174  Q
    ||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||    
14295499 aacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatataccattttctca 14295597  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
14295598 tactttgaacatgaatttcaactaacaacaattcaattatccataacttcatacattcaaacatgacatcataa 14295671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 248
Target Start/End: Original strand, 14301126 - 14301298
Alignment:
76 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctca 174  Q
    ||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||    
14301126 aacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatataccattttctca 14301224  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
14301225 tactttgaacatgaatttcaactaacaacaattcaattatccataacttcatacattcaaacatgacatcataa 14301298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 35123755 - 35123927
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||    
35123755 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacacatacc--cttttc 35123851  T
174 atac-tttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||  || ||||||| |||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
35123852 atacactttaacatgtaattcgactaacaacaattcaattatccataatttcatacatccaaacacgtcatcataa 35123927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 14298494 - 14298653
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  || | |  ||  | |||||||||||||    
14298494 aattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcatattttcaacacgtaaccatatcatacactttgaacatgt 14298593  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
14298594 aattcaactaaccacaattcaattatccataacttcatacatccaaacatgtcatcataa 14298653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 14304121 - 14304280
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  || | |  ||  | |||||||||||||    
14304121 aattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcatattttcaacacgtaaccatatcatacactttgaacatgt 14304220  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
14304221 aattcaactaaccacaattcaattatccataacttcatacatccaaacatgtcatcataa 14304280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 17523076 - 17522904
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||| ||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||||||||||||||  || | |    
17523076 caacaacaac-atcaattggtcatgaaacttatcacaattcatcaataacatagcataattcaccaattgagcatattttcaacatataccattttgtta 17522978  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||  |||||||||||    
17522977 tactttgaacatgtaattcaactaacaacaattcaattatccacatcttcatacatccaaaactgtcatcataa 17522904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 22144446 - 22144287
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
22144446 aattgatcatgaaacttatcacaattcatcaacaacaatgcatacttcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 22144348  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
22144347 gtaattcaactaac-acaattcaattattcataacttcatacatctaaacatgtcatcataa 22144287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 55441023 - 55440863
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||||||||||||||||||||||||||  |||||| || |||||||| ||| ||||||||||||||| |||||| ||  |||||||||||||||||||    
55441023 aattgatcatgaaacttatcacaattcaaccacaacatagtataattcaaccagttgagcatattttcatcatatatcattttctcatactttgaacatg 55440924  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
55440923 aaattccactaacaacaattcaattatccataacttcatacattcaaacatgtcatcataa 55440863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 16996233 - 16996075
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||| || ||||| | || |||||||||||||||      
16996233 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttca-cacatacccatttttcatactttgaacatac 16996135  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||    
16996134 aattcaagtaacaacaattcaatcattcataacttcatacatctaaacatgtcatcataa 16996075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 317682 - 317525
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||| |||||||||||| || ||||| | || |||||||||||||||      
317682 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaatttagcatattttca-cacatacccatttttcatactttgaacatac 317584  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcata 247  Q
     |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
317583 aattcaactaacaacaattcaatcattcataacttcatacatctaaacatgtcatcata 317525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 53898643 - 53898470
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||    
53898643 tcaacaacaac-attaattgatcatgaaacttatcacaatgcaacaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttc 53898546  T
174 at--actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||  ||||||||||| | || |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
53898545 atacactttgaacatttaatgcaactaac-acaattcaattattcataacttcatagatctaaacatgtcatcataa 53898470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 3578161 - 3578320
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||||||||||||||||| ||||||||  |||||| ||| ||||||| ||| ||||||||||||||||||||||| |  |||||||||||||||||||    
3578161 aattgatcatgaaacttatcgcaattcaaccacaacatagcgtaattcaaccagttgagcatattttcaacatatactattttctcatactttgaacatg 3578260  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
3578261 aaattcaactaataacaattcaattatccataacttcatacat-tcaacatgtcatcataa 3578320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 19570862 - 19570707
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatatac-caacttctcatactttgaacatg 187  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| || ||||||| ||  |||  | ||||||||||||    
19570862 aattgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcatatttcca-catatactcattttcatacactttgaacatg 19570764  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
19570763 taattcaactaaca-caattcaattattcataacttcatacatctaaacatgtcatca 19570707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 248
Target Start/End: Complemental strand, 34439513 - 34439357
Alignment:
93 gatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgatt 192  Q
    ||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||| |||| ||||| | ||  |||||||||||||||| |||    
34439513 gatcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgagcatattttaaacacatacccattttacatactttgaacatgtaatt 34439414  T
193 caactaacaacaattcaattatccataacttcatacatc-taaacatgtcatcataa 248  Q
    |||| |||||||||||| |||||||||||||||||| || |||||||| ||||||||    
34439413 caaccaacaacaattcatttatccataacttcatacctcataaacatgacatcataa 34439357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 6146920 - 6146764
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    |||||| |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
6146920 aattgaccatgaaacttatcacaattcatcaacaacaatgcatgattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 6146822  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    || ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||    
6146821 gtaattcaactaa-tacaattcaattattcataacttcatacatctaaacatgtcatca 6146764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 245
Target Start/End: Original strand, 13817585 - 13817740
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||| ||||||||| | || ||||  |||||||||||    
13817585 aattgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata-tttccacatataccca-ttttcatacactttgaacat 13817682  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    || ||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
13817683 gtaattcaactaac-ataattcaattattcataacttcatacatctaaacatgtcatca 13817740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 6154505 - 6154346
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
6154505 aattgatcatgaaacttatcacaattcatcaataacaatgcataattcaccaattgagcatattttcaacacataccca-ttttcataaactttgaacat 6154407  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||| ||||    
6154406 gtaattcaactaac-acaattcaactattcataatttcatacatctaaacatgtcattataa 6154346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 17938633 - 17938805
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || |||||||||||||| | | |||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
17938633 tcaacaacaac-atcaattgatcatgaaaataaccacaatccaacaacaacaaagcataattcatcaattaagcatattttcaacatatatcaacttctc 17938731  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||||||||||||||||||  ||| ||||  ||| ||||||| |||||||||| |||||    
17938732 atactttgaacatgcaattcaactaacaacaattcgcttaaccat-gctttatacatccaaacatgtcaccataa 17938805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 11061165 - 11061033
Alignment:
104 ttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaa 202  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
11061165 ttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaacctgaaattcaactaacaa 11061066  T
203 caattcaattatccataacttcatacatctaaa 235  Q
    |||| ||||||| ||||||||||||||| ||||    
11061065 caatccaattattcataacttcatacatttaaa 11061033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 16182119 - 16181961
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacat 186  Q
    |||||||||| |||||||||||||||||  ||| |||| ||||||||||||||||  ||||||||||| || ||||| | || ||||||  |||||||||    
16182119 aattgatcattaaacttatcacaattcatcaacgacaatgcataattcaccaatttggcatattttca-cacatacccattt-tcatacactttgaacat 16182022  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
16182021 gtaatttaactaaca-caattcaattattcataacttcatacatctaaacatgtcatcataa 16181961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 17139568 - 17139740
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| ||||||||||||  |||||    
17139568 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcatattt-caacatataccattttctc 17139665  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||| ||||||||||  |||  || |||||||||||||||| | | |||||||| |||  ||||||||||||||||    
17139666 atagtttgaacatgaaatttcaccaacaacaattcaattaccaacaacttcatgcattcaaacatgtcatcataa 17139740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 11329148 - 11329010
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||||||  |||||    
11329148 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcatattt-caacatataccactttctc 11329051  T
174 atactttgaacatgtgattcaactaacaacaattcaattat 214  Q
    ||||||||||||||  |||  ||||||||||||||||||||    
11329050 atactttgaacatgaaatttcactaacaacaattcaattat 11329010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 7853913 - 7853995
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatga 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
7853913 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatga 7853995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 33341812 - 33341896
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
33341812 acataatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaat 33341896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 16880196 - 16880331
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataatt-caccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| ||| ||||||||||||| | |||||||||||  |||||||||||||||||||    
16880196 aattgaacatgaatcttatcacaattcaacaacaacatagcataatttcacaaattgagcatattct-aacatataccactttctcatactttgaacatg 16880294  T
188 tgattcaactaacaacaattcaattatccataacttc 224  Q
      |||  ||||||||||||||||||||| | ||||||    
16880295 aaattttactaacaacaattcaattatcaacaacttc 16880331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 19946629 - 19946713
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
19946629 acatcatcaaaatcaaacttctatattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaat 19946713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 54685625 - 54685541
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||    
54685625 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaacagcaactcatttctcaacaacaatcatgaat 54685541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 12488913 - 12488752
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| | ||||||||| ||| |||||||||  ||||||||||| ||  |||||    
12488913 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacataacataattcatcaatttgagcata-attcaacatatatcactttctc 12488816  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaaca 237  Q
    ||||||||||||||  |||  |  |||||||||||||||||| | |||||||| |||| |||||    
12488815 atactttgaacatgaaatttcatcaacaacaattcaattatcaacaacttcatgcatccaaaca 12488752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 248
Target Start/End: Original strand, 38527841 - 38527960
Alignment:
128 gcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacatgtgattcaactaacaacaattcaattatccataacttca 225  Q
    ||||||||||||||||||||||||||||  || ||||| | || ||||||  ||||||||||| ||||||||||||  ||||||||||| ||||||||||    
38527841 gcataattcaccaattgagcatattttcc-cacatacccattt-tcatacactttgaacatgtaattcaactaacat-aattcaattattcataacttca 38527937  T
226 tacatctaaacatgtcatcataa 248  Q
    |||||||||||||||||||||||    
38527938 tacatctaaacatgtcatcataa 38527960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 12560409 - 12560274
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||||||| | ||||||||||||| ||||||| |||||||||| |||| ||| |||||||||| ||||||||||  |||||||||||||||||||     
12560409 attgatcatgaatcatatcacaattcaacaacaacatagcataattcaaccagttgggcatattttc-acatataccactttctcatactttgaacatga 12560311  T
189 gattcaactaacaacaattcaattatccataacttca 225  Q
     |||   ||||||| ||||||| |||| |||||||||    
12560310 aatttctctaacaaaaattcaagtatcaataacttca 12560274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 47785064 - 47784988
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| ||||||    
47785064 acatcatcaaaatcaaacttcttcattatcaacccattttacagaatcaccaacaacaactcatttctcaccaacaa 47784988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 39656599 - 39656725
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| ||||  ||||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||| ||  |||||||||||||||||||    
39656599 aattgaacatgaatcttacaacaattcaacaacaacatagcataattcaacaatttgagcatattt-caacatatatcactttctcatactttgaacatg 39656697  T
188 tgattcaactaacaacaattcaattatc 215  Q
      |||  |||||||||||||||||||||    
39656698 aaatttcactaacaacaattcaattatc 39656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 9303425 - 9303343
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatg 88  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||    
9303425 acatcatcaaaatcaaacttcttctttatcaacccgttttacaaaaccaccaacaacaactcattttctcaacaacaatcatg 9303343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 14059387 - 14059228
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| ||||||  |||||||||||||| ||||||| ||||||||||| | ||||||||||| |||||||||||  ||  |||||||||||||||||||    
14059387 aattgaacatgaatattatcacaattcaacaacaacatagcataattcatcaaattgagcata-tttcaacatatgtcattttctcatactttgaacatg 14059289  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||   |||| ||||||||||||||| | |||||||| |||  ||||||  ||||||||    
14059288 aaatttctctaaaaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 14059228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 11196456 - 11196336
Alignment:
119 aacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatcca 217  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||||  ||||||        ||||   ||||||||||||||||||||||||||||    
11196456 aacaacaaatcataattcaaccaattaagcatattttcaacatataccattttctca--------acataaaattcaactaacaacaattcaattatcca 11196365  T
218 taacttcatacatctaaacatgtcatcat 246  Q
    |||||||||||||  |||||| |||||||    
11196364 taacttcatacattcaaacatatcatcat 11196336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 248
Target Start/End: Complemental strand, 3576598 - 3576453
Alignment:
103 cttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 201  Q
    ||||||||||||||| ||||||| |||||||| || ||||| ||||||| || ||| ||||| ||  ||||||||| |||||||||  |||  || ||||    
3576598 cttatcacaattcaacaacaacatagcataatccatcaatttgagcataatt-caatatatatcactttctcatacattgaacatgaaatttcaccaaca 3576500  T
202 acaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| | |||||||| |||  |||||| |||||||||    
3576499 acaattcaattatcaacaacttcatgcattcaaacatatcatcataa 3576453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 12349904 - 12349834
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaaca 159  Q
    ||||||||||||||||||||||||||||  ||| || | ||||||||||||||||||||||||| ||||||    
12349904 aattgatcatgaaacttatcacaattcatcaactacgatgcataattcaccaattgagcatattatcaaca 12349834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 14528199 - 14528118
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttca 156  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||    
14528199 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcatattttca 14528118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 3992624 - 3992684
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
3992624 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 3992684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 38167988 - 38168048
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||| ||||||||  ||||||| ||||||||||||||||||||||||    
38167988 attgatcatgaaacttattacaattcatcaacaacatagcataattcaccaattgagcata 38168048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 2844265 - 2844325
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  || ||| | |||||||||||||||||||||||    
2844265 attgatcatgaaacttatcacaattcatcaagaaccatgcataattcaccaattgagcata 2844325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 16261527 - 16261587
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
16261527 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 16261587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 30153016 - 30153076
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
30153016 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 30153076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 30207289 - 30207448
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| | |||| |||||||||||| || ||||||| |||| |||||| ||| || ||||||  ||||||||||| ||  |||||||||||||||||||    
30207289 aattgaacttgaatcttatcacaattgaacaacaacatagcacaattcatcaatttaagcata-attcaacatatatcactttctcatactttgaacatg 30207387  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || |||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
30207388 aagtttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 30207448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 53771115 - 53771175
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
53771115 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 53771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 54685482 - 54685422
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
54685482 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 54685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 47784876 - 47784781
Alignment:
153 ttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||| ||  |||||||||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  |||||| |||||||||    
47784876 ttcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataa 47784781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 1990759 - 1990801
Alignment:
34 atcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
1990759 atcaacccattttacaaaaccaccaacaacaactcatttctca 1990801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 17191628 - 17191773
Alignment:
103 cttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 201  Q
    ||||||||||||||  ||||||| | ||||||||| ||||| ||||||| || ||||||| | ||  |||||||||||||||||||  |||  || ||||    
17191628 cttatcacaattcagcaacaacataacataattcatcaatttgagcataatt-caacataaatcactttctcatactttgaacatgaaatttcaccaaca 17191726  T
202 acaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||| |||||| | || ||||| |||  |||||| |||||||||    
17191727 acaattcgattatcaacaatttcatgcattcaaacatatcatcataa 17191773  T

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Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 33341955 - 33342015
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||| ||||||  |||||| | |||||||||||||||||||||||    
33341955 attgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgagcata 33342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 7854056 - 7854116
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||  | |||||||||||||||||| ||||    
7854056 attgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgaacata 7854116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 17956165 - 17956109
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 146  Q
    |||||||||||||| ||||||||||||  |||||| | ||||||| |||||||||||    
17956165 attgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgag 17956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 23492447 - 23492507
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| |  |||||||||||| |||||||||    
23492447 attgatcatgaaacatatcacaattcatcaacaaccatccataattcaccatttgagcata 23492507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 45581709 - 45581765
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||||||||||||  |||||  | |||||||||||||||||||||||    
45581709 atcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 45581765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 17204818 - 17204913
Alignment:
153 ttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||| ||  |||||||||||||||||||  |||  || ||||||||||| |||||| | || ||||| |||  |||||| |||||||||    
17204818 ttcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcatcataa 17204913  T

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Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 34559857 - 34559898
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||||||||||||| | ||||||||||| ||||||    
34559857 tcaacccattttacaaaaccaacaacaacaactcaattctca 34559898  T

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Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 12952915 - 12952963
Alignment:
29 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctca 76  Q
    |||| ||||||||||||| ||||||||| | ||||||||||||||||||    
12952915 tcataatcaacccatttttacaaaaccaacaacaacaactcatttctca 12952963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 17960602 - 17960554
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||||  |||| ||||||||||||||| || ||||||    
17960602 tcaacccattttacaaagtcaccaacaacaactcatttcccatcaacaa 17960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 54038301 - 54038245
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||||||| ||||  |||||| | |||||||||||||||| ||||||    
54038301 atcatgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcata 54038245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 118150 - 117978
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || || |||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
118150 caacaacaac-atcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacatattttcaacatataccaacttctca 118052  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
118051 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 117978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 109649 - 109477
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||| | ||||||||||| ||||||||| ||||||    
109649 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatttatcatattttcaatatataccaatttctca 109551  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
109550 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 109477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 11287477 - 11287649
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || || |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
11287477 caacaacaac-atcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctca 11287575  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
11287576 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcaacataa 11287649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 7284248 - 7284075
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
7284248 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattaagcatattttcaacatataccaacttctc 7284150  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||   |||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
7284149 atactttgaacatacaattcaactaataacaattcaatcatccataacttcacacatctaaacatgtcatcataa 7284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 26070451 - 26070279
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||||||||||  ||||||    
26070451 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcatattttcaacatataccattttctca 26070353  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
26070352 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataa 26070279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 26094238 - 26094066
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||||||||||  ||||||    
26094238 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcatattttcaacatataccattttctca 26094140  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
26094139 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataa 26094066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 12370027 - 12369855
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || |||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| | || |||    
12370027 caacaacaac-atcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattcaccaattgagcatattttcaacagatacccatttttca 12369929  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
12369928 tactttgaacatgtaattcaaccaacaacaattcaattatccgtaacttcatacatctaaacatgtcatcataa 12369855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 3895099 - 3895254
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| | || ||||||||||||||||      
3895099 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgca 3895198  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
3895199 attcaactaacaacaattcaattatccataacttcatacatctaaacatttcatca 3895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 15822619 - 15822447
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||  |||      
15822619 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccatttgagcatattttcaacatataccattttcat 15822521  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
15822520 acattttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatc-caacatgtcatcataa 15822447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 16570193 - 16570020
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||| | ||||||||  |||||    
16570193 caacaacaac-atcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcatattttccagatataccattttctc 16570095  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
16570094 atactttgaacatgaaattcaactaacaacaaatcaattatccataacttcatacatccaaacatgtcatcataa 16570020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 16595469 - 16595642
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||| | ||||||||  |||||    
16595469 caacaacaac-atcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcatattttccagatataccattttctc 16595567  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
16595568 atactttgaacatgaaattcaactaacaacaaatcaattatccataacttcatacatccaaacatgtcatcataa 16595642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 12248294 - 12248135
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| |  |||||||||||| ||||||     
12248294 attgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatatactattttctcatactttaaacatga 12248195  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
12248194 aattcaactaataacaattcaattatccataacttcatacatccaaacatgtcatcataa 12248135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 45452340 - 45452183
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||| |||||   |||| |||||||||||||||||||| ||||| | || |||||||||||||||||    
45452340 aattgatcatgaaacttatcacaattcatcaacaacatagcatg--tcacaaattgagcatattttcaacacatacccatttttcatactttgaacatgt 45452243  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
45452242 aattcaactaacaacaatccaattatccataacttcatacatctaaacatgtcatcataa 45452183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 12759060 - 12759219
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||   || ||| | |||||||||||    
12759060 aattgatcatgaaacttatcataattcaccaacaacatagcataattcaccaattgagcatattttcaacacatacccctttttcacattttgaacatgt 12759159  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
12759160 aattcaaccaacaacaattcaattatccataacttcatacatctaaacatatcatcataa 12759219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 13863104 - 13862944
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| ||||||  |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||||||||||||||||    
13863104 aattgaacatgaatattatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 13863005  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
13863004 taattcaaccaacaacaattcaattattcataacttcatacatctaaacatttcatcataa 13862944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 143712 - 143871
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
143712 aattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 143810  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
143811 gtaattcaactaac-acaattcaattatttataacttcatacatctaaacatgtcatcataa 143871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 44865303 - 44865463
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacat 186  Q
    |||| |||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| | || ||||||  |||||||||    
44865303 aattaatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcatattttcaacacatacccattt-tcatacactttgaacat 44865401  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||    
44865402 gtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatggcatcataa 44865463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 47289854 - 47290013
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
47289854 aattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 47289952  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||    
47289953 gtaattcaactaac-acaattcaattattcataacttcatatatctaaacatggcatcataa 47290013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 49047861 - 49047689
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| | ||||||||| |||||||||||||||| ||||||||||||   ||||    
49047861 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacataacataattcaaccaattgagcatattt-caacatataccactctctc 49047764  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  ||||||||||| ||||    
49047763 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatgtcattataa 49047689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 35094890 - 35095044
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaactt-ctcatactttgaacatgt 188  Q
    |||||||||||||| | | ||||||||  |||||||  ||||||||||||||||||||||||||||| || ||||| | || |  |||||||||||||||    
35094890 attgatcatgaaacatttaacaattcatcaacaacagtgcataattcaccaattgagcatattttca-cacatacccattttcatatactttgaacatgt 35094988  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
     |||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||    
35094989 aattcaactaaca-caattcaatcattcataacttcatacatctaaacatgttatca 35095044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 39046797 - 39046646
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||| ||||||||| |||||||  | || |||    ||||||||      
39046797 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag-atattttca-catatactcatttttcaa---ttgaacatac 39046703  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
     ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
39046702 aattcaactaacaataattcaatcattcataacttcatacatctaaacatgtcatca 39046646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 7284376 - 7284292
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||| ||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
7284376 acatcgtcaaaatcaaacttctccattatcaacccatttaacaaaaccaccaacaacaactcatttctcaacaacaatcatgaat 7284292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 13377589 - 13377761
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||||| ||| ||| || ||||||||| ||  |||||    
13377589 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattaatcaatttgagtataatt-caacatatatcactttctc 13377686  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
13377687 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 13377761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 17224125 - 17223953
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||  ||||  ||||||||| ||||||| ||||||||||| ||||| ||| ||| || ||||||||| ||  |||||    
17224125 caacaacaac-atcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaacaatttgagtataatt-caacatatatcactttctc 17224028  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||||| |||||| | |||  |||||| |||||||||    
17224027 atactttgaacatgaaatttcacaaacaacaattcaattatccacaacttcgtgcattcaaacatatcatcataa 17223953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 3049657 - 3049717
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||    
3049657 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 3049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 13274847 - 13275009
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||           |||||||||  |||||    
13274847 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag-----------catataccactttctc 13274934  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  ||||||||||||||||||| | | |||||| | |||  |||||| |||||||||    
13274935 atactttgaacatgaaattttactaacaacaattcaattaccaacaacttcttgcattcaaacatatcatcataa 13275009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 14272203 - 14272134
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||| ||| | |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
14272203 acatcattaaaataaaacttcttcatcatcaacccattttacaaaaccaccaccaacaactcatttctca 14272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 111450 - 111390
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
111450 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 111390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 126489 - 126549
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
126489 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 2028995 - 2029055
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||  | |||||||||||||||||||||||    
2028995 attgatcatgaaacttatcacaattcatcaacaatcatgcataattcaccaattgagcata 2029055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 2190367 - 2190307
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
2190367 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 2190307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 42056470 - 42056410
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
42056470 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 42056410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 9838939 - 9839111
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| |||| |||||| || || ||||||| || ||||||||| ||  ||| |    
9838939 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaacatttagagcataatt-caacatataacactttcac 9839036  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || ||||||||||||||||||   || ||||| |||  |||||| |||||||||    
9839037 atactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataa 9839111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 16919646 - 16919730
Alignment:
103 cttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    ||||||||||||||| ||||||| ||||||||||| ||| |||||||||  ||||||||||| ||  |||||||| ||||||||||    
16919646 cttatcacaattcaacaacaacatagcataattcatcaatttgagcata-attcaacatatatcactttctcatattttgaacatg 16919730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 32494223 - 32494167
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
32494223 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 32494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 48356704 - 48356876
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| | || |||||| || || ||||||| || ||||||||| ||  ||| |    
48356704 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaacatttagagcataatt-caacatataacactttcac 48356801  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || ||||||||||||||||||   || ||||| |||  |||||| |||||||||    
48356802 atactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataa 48356876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 17224220 - 17224179
Alignment:
42 attttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
17224220 attttacaaaaccaccaacaacaactcatttctcatcaacaa 17224179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 48356602 - 48356643
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||||||||||||| | ||||||||||| ||||||    
48356602 tcaacccattttacaaaaccaacaacaacaactcaattctca 48356643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 16915217 - 16915177
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctc 75  Q
    ||||||||||||||||||||| | ||||||||||| |||||    
16915217 tcaacccattttacaaaaccaacaacaacaactcaattctc 16915177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 9047 - 9219
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || || ||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
9047 caacaacaac-atcaagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctca 9145  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
9146 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 9219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 9784249 - 9784079
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || |||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
9784249 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaa---caacaaagcataattcaccaattaagcatattttcaacatataccaacttctc 9784154  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
9784153 atactttgaacatgtaattcaatcaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 9784079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 21718287 - 21718460
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || |||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||    
21718287 tcaacaacaac-atcaattgatcatgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcatattttgaacacataccaatttctc 21718385  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21718386 atactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 21718460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 35054830 - 35054988
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
35054830 attgatcatgaaacttatcacagttcatcaactacatagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 35054929  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
35054930 attcaactaacaacaattcaattattcataacttcatacatctaaacatgtcatcataa 35054988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 49967710 - 49967882
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||| ||||||||||||  |||||||| | |||||||||||||||||||||||||||||| ||||| | || | |    
49967710 caacaacaac-atcaattgatcatgaaacgtatcacaattcatcaacaacaatgtataattcaccaattgagcatattttcaacacatacccatttttta 49967808  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
49967809 taatttgaacatgtaattcaactaacaacaattcaattattcataacttcatacatctaaacatggcatcataa 49967882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 248
Target Start/End: Complemental strand, 22403279 - 22403125
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacatgtgat 191  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||||  ||||||||||||| ||    
22403279 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacatgtaat 22403181  T
192 tcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||||    
22403180 tcaactaac-acaatttaattattcataacttcatacatctagacatgtcatcataa 22403125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 41212145 - 41212303
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| ||||||||||||  |||||||  ||||||||||| ||||||||||||||| | || ||||| | || |||||||||||||||      
41212145 aattgatcatgaaacatatcacaattcatcaacaacagtgcataattcactaattgagcatattttta-cacatacccatttttcatactttgaacatac 41212243  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
41212244 agttcaactaacaacaattcaattattcataacttcatacctctaaacaggtcatcataa 41212303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 27329928 - 27329771
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaac--ttctcatactttgaacatg 187  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  ||| |||||||||| ||||    
27329928 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttc-acata-acccacttttcacatactttgatcatg 27329831  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || ||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
27329830 aagtttcaccaacaacaattcaattat-cataacttcatatatacaaacatgtcatcataa 27329771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 35522507 - 35522432
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
35522507 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 35522432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 51627851 - 51627679
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||||||||||||| |||| || | |||||||| ||||||||| |||| |||||||||||||||  |||||    
51627851 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaccatatcataattcaaccaattgaacata-tttcaacatataccattttctc 51627754  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||   ||  ||||||||||||||||| ||| | || ||||| |||  || ||| |||||||||    
51627753 atactttgaacatgaagtttcactaacaacaattcaatcatcaacaaattcatgcattcaagcatatcatcataa 51627679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 35522432 - 35522367
Alignment:
183 acatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
35522432 acatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataa 35522367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 248
Target Start/End: Original strand, 20177267 - 20177407
Alignment:
108 cacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaat 206  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||||  |||  || |||||||||    
20177267 cacaattcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctcatactttgaacatgaaatttcaccaacaacaat 20177365  T
207 tcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||| | |||||| | |||  |||||| |||||||||    
20177366 tcaattatcaacaacttcgtgcattaaaacatatcatcataa 20177407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 16645985 - 16646144
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| ||||| |||  ||||||||||| ||  |||||||||||||||||||    
16645985 aattgaacatgaatcttatcacaattcaacaacaacatagcataattaatcaatttgagaata-attcaacatatatcactttctcatactttgaacatg 16646083  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||  || |||| ||||| ||||||| | |||||||| |||  ||||||  ||||||||    
16646084 aaattttaccaacatcaattaaattatcaacaacttcatgcattcaaacataacatcataa 16646144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 16656711 - 16656870
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| |||||||||  ||||||||||| ||  ||||||||||||||||| |    
16656711 aattgaacatgaatcttatcacaattcaacaacaacatagcataattgatcaatttgagcata-attcaacatatatcactttctcatactttgaacacg 16656809  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || |||||||||||||||||| | ||||| || |||  ||||||  ||||||||    
16656810 aagtttcaccaacaacaattcaattatcaacaactttatgcattcaaacataacatcataa 16656870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 15861607 - 15861547
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
15861607 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 37234047 - 37233875
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || ||||||||||||  |||||| ||||||||||| || || |||||||  ||||||||||| ||  |||      
37234047 caacaacaac-atcaattgaacatgaatctcatcacaattcaaccacaacatagcataattcaacatttagagcata-attcaacatatatcactttcat 37233950  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || ||||||||||||||||||   || ||||| |||  |||||| |||||||||    
37233949 atactttgaacatgcaattttaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataa 37233875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 21860089 - 21860145
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
21860089 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 21860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 44035152 - 44035092
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||| ||||||||    
44035152 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcata 44035092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 27674755 - 27674812
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaatt 92  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||| || ||||||||    
27674755 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaaaatcatgaatt 27674812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 19603055 - 19603103
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||||||    
19603055 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaacaa 19603103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 22367093 - 22367152
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||| ||||||||||||||||||    
22367093 attgatcatgaaacatatcacaattcatcaacaaccatgcat-attcaccaattgagcata 22367152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 9784288 - 9784238
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaaca 125  Q
    ||||||||||| || |||||||| |||||||||||||||||||| |||||||    
9784288 tcaacaacaac-atcaattgatcttgaaacttatcacaattcaacaacaaca 9784238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 22829712 - 22829665
Alignment:
36 caacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||||||||||||||  |||| |||||||||||||||||| ||||||    
22829712 caacccattttacaaagtcaccaacaacaactcatttctcatcaacaa 22829665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 38033962 - 38033914
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||||  |||| ||||||||| |||||||| ||||||    
38033962 tcaacccattttacaaagtcaccaacaacaacttatttctcatcaacaa 38033914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 253163 - 253004
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
253163 aattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgagcatattttcaacatataccaatttctcatactttgaaaatgt 253064  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
253063 aattcaactaacaacaattcaattatccctaacttcatacatccaaacatgtcatcataa 253004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 9996 - 10169
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||    
9996 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatatacc--cttttc 10092  T
174 ata--ctttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
10093 atactctttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataa 10169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 126; Significance: 4e-65; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 112732 - 112560
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
112732 caacaacaac-ataaattgatcatgaaacttatcacaattcatcaaccacatagcataattcactaattgagcatattttcaacatataccaatttctca 112634  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
112633 tactttgaacatgtaattcaactaacaacaattcaattgttcataacttcatacatctaaacatgtcatcataa 112560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 75 - 247
Target Start/End: Original strand, 109650 - 109821
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || || |||||||||| ||||||||||||||| ||||||| |||| |||||| ||||| |||||||||| ||||||||||||  |||||    
109650 caacaacaac-atcaactgatcatgaatcttatcacaattcaacaacaacatagcaaaattcaacaatttgagcatattt-caacatataccactttctc 109747  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcata 247  Q
    ||||||| ||||||  |||  | ||||||||||||||||||| | ||||||||  ||  |||||| ||||||||    
109748 atactttaaacatgaaatttcattaacaacaattcaattatcaacaacttcatggattcaaacatatcatcata 109821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 103096 - 102937
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| ||||||  |||||||||||||| ||||||| ||||||||||| ||| || ||||||||  || |||||||||  |||||||||||||||||||    
103096 aattgaacatgaatgttatcacaattcaacaacaacatagcataattcaacaaatttagcatattc-caccatataccactttctcatactttgaacatg 102998  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||  ||||||||||||||||||||| | |||||||| |||  |||||| |||||||||    
102997 aaatttcactaacaacaattcaattatcaaaaacttcatgcattcaaacatatcatcataa 102937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 103211 - 103163
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||||  |||| |||||||||||||| ||| ||||||    
103211 tcaacccattttacaaagtcaccaacaacaactcatttatcaccaacaa 103163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 11756 - 11583
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| | || ||    
11756 tcaacaacaac-ataaattgatcatgaaactgatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcaacacatacccatttttc 11658  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
11657 atactttgaacatgtaattcaatcaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 11583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 75 - 245
Target Start/End: Original strand, 85392 - 85561
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||| ||||||||||||| ||||||||| ||||||    
85392 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattaagcatattttcaatatataccaatttctca 85490  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
85491 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatca 85561  T

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Target: scaffold0014; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 159359 - 159532
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||||| |||||||  ||| ||  |||||    
159359 caacaacaac-atcaattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataatttcaactcatatcattttctc 159457  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||||    
159458 atactttgaacatgaaattcaactaacaacaatgccattatccataacttcatacattcaaacatgtcatcataa 159532  T

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Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 271229 - 271402
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||      
271229 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcatattttcaacacatacccatttcat 271327  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
271328 acactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataa 271402  T

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Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 25602084 - 25602256
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||| ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||    
25602084 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgagcatattttcaacatatatcaatttctca 25602182  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
25602183 tactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataa 25602256  T

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Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 36890859 - 36890703
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||    
36890859 aattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaattaagcatattttcaacatattccattttctcatactttgaacatgt 36890760  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
36890759 aattcaactaacaacaattcaattatccataacttcatacatctaaacatgccatca 36890703  T

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Target: chr2; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 4448321 - 4448148
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||| | ||| | |||      
4448321 tcaacaacaac-atcaattgatcatgaaacttatcataattcaacaacaacaaagcatcattcaccaattgaacatattttcaacacaaacccatttcat 4448223  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
4448222 acactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataa 4448148  T

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Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 28974109 - 28974281
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || |||||||||||||||||| |||||||||  ||||||| |||||||||| |||| ||||||||||||||||||||||||  ||||||    
28974109 caacaacaac-atcaattgatcatgaaacttaccacaattcatcaacaacatagcataattcgccaaatgagcatattttcaacatataccattttctca 28974207  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||    
28974208 tactttgaacatgtaattcaattaacaacaattctattatccataacttcatacattcaaacatgtcatcataa 28974281  T

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Target: chr2; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 75 - 245
Target Start/End: Original strand, 32465918 - 32466086
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||| || ||| | | || |||    
32465918 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaagaacaatgcataattcaccaattgagcatattttca-cacatatccatttttca 32466015  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    ||||||||||||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
32466016 tactttgaacatacaattcaactaacaacaattcaatcattcataacttcatacatctaaacatgtcatca 32466086  T

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Target: chr2; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 127 - 248
Target Start/End: Original strand, 27261915 - 27262035
Alignment:
127 agcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 226  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||    
27261915 agcataattcaccaat-gagcatattttcaacatataccaatttctcatactttgaacatgtaattgaactaacaacaattcaattatccataactttat 27262013  T
227 acatctaaacatgtcatcataa 248  Q
    ||||| ||||||||||||||||    
27262014 acatccaaacatgtcatcataa 27262035  T

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Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 23836879 - 23836720
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||  ||| ||||| | || ||||  |||||||||||    
23836879 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttttcacacataccca-ttttcatacactttgaacat 23836781  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || |||| |||||| |||||||||| || |||||||||||||||||||||||||||||||||    
23836780 gtaattccactaac-acaattcaatcattcataacttcatacatctaaacatgtcatcataa 23836720  T

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Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 25876091 - 25875935
Alignment:
91 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacatgt 188  Q
    ||||||||||| | ||||||||||||  |||||||| ||||||||||||||||||||||||||||| || ||||| | || ||||||  |||||||||||    
25876091 ttgatcatgaagcatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttca-cacatacccattt-tcatacactttgaacatgt 25875994  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||    
25875993 aattcaactaacat-aattcaattattcataacttcatacatctaaacatgtcatcataa 25875935  T

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Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 19433649 - 19433573
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
19433649 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcatcaacaa 19433573  T

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Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 245
Target Start/End: Complemental strand, 24571479 - 24571310
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| |||| |||||||||| || |||| |||||||||| |||||||||||||| |||||||||||| ||  |||||    
24571479 caacaacaac-atcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgagcata-tttcaacatatatcattttctc 24571382  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    |||| |||||||||  |||   ||||||||||||||| |||||| |||||||| |||  |||| ||||||||    
24571381 ataccttgaacatgaaatttctctaacaacaattcaagtatccacaacttcatgcattcaaacgtgtcatca 24571310  T

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Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 68052 - 68224
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| |||| |||||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||| ||  |||||    
68052 caacaacaac-atcaattgaacatgaatcttaccacaattcaacaacaacatagcataattcaacaatttgagcatattt-caacatatatcactttctc 68149  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
68150 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 68224  T

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Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 22580033 - 22579877
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatatacca-acttctcatactttgaacat 186  Q
    |||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||| |||||||||||| ||   ||||||||| |||| |||    
22580033 aattgatcatgaaacttatcacaattc---aacaacaaagcataattcaaccaattgagcata-tttcaacatataacatttttctcataccttgatcat 22579938  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
        ||  || ||||||||||||||||| |||||||||||||||  ||||||||||||||||    
22579937 aaagtttcaccaacaacaattcaattat-cataacttcatacatacaaacatgtcatcataa 22579877  T

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Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 24827044 - 24826961
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatga 89  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||    
24827044 acatcatcaatatcaaacttcttctttatcaacccattttacaaaaccaccaacaacagctcattttctcaacaacaatcatga 24826961  T

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Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 25212977 - 25213061
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca--tttctcaacaacaaccatga 89  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||||||  ||||||||||  |||||||||||||| |||||    
25212977 acatcatcaaaatcaaatttcttctttatcaacccattttacaaaaccaccaccaacaactcatttttctcaacaacaatcatga 25213061  T

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Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 31146354 - 31146196
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| || ||| ||||| ||||||||| |||| || ||||||||||| ||||| |||||||||| ||||||||| ||  ||||||||||||||||||     
31146354 aattgaacaggaatcttattacaattcaacaaca-catagcataattcaacaatttgagcatattt-caacatatatcactttctcatactttgaacata 31146257  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||   |||||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
31146256 aaatttctctaacaacaattcaattatcaacaacttcatgcattcaaacataccatcataa 31146196  T

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Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 43645824 - 43645886
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca 69  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||||  ||||||||||    
43645824 acatcatcaaaatcaaactttttcattaccaacccattttacaaaaccaccaccaacaactca 43645886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 43645953 - 43646125
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||  |||| |||| ||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||    
43645953 caacaacaac-atcaattgaacatgattcttaccacagttcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctc 43646050  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||| ||||||  |||  || ||||||||| |||||||| | |||||||| |||  |||||| ||| |||||    
43646051 atactttaaacatgaaatttcaccaacaacaatccaattatcaacaacttcatgcattcaaacatatcaacataa 43646125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 6879510 - 6879577
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca 156  Q
    |||||||||| |||| ||||||||||||  || ||||| ||||||||||||||||||| |||||||||    
6879510 aattgatcattaaacatatcacaattcatcaataacaatgcataattcaccaattgagtatattttca 6879577  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 22274796 - 22274856
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    ||||||||||||||  |||||||||||  |||||| | |||||||||||||||||||||||    
22274796 attgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcata 22274856  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 22284029 - 22284089
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    ||||||||||||||  |||||||||||  |||||| | |||||||||||||||||||||||    
22284029 attgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcata 22284089  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 3529 - 3472
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaatt 92  Q
    |||||||||||||||||  |||| |||||||||||||||||| | |||| ||||||||    
3529 tcaacccattttacaaagtcaccaacaacaactcatttctcatctacaatcatgaatt 3472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 24884643 - 24884684
Alignment:
34 atcaacccattttacaaaaccaccgacaacaactcatttctc 75  Q
    |||||||||||||||||||||| | |||||||||||||||||    
24884643 atcaacccattttacaaaaccaacaacaacaactcatttctc 24884684  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 21274230 - 21274174
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 146  Q
    |||||||||||||| ||| ||||||||  |||||| | |||||||||||||||||||    
21274230 attgatcatgaaacatattacaattcatcaacaaccatgcataattcaccaattgag 21274174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 22775379 - 22775220
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| |||||||||||||||  |||||| |||||||||||  || |||| || |  |||||||||||  |  |||||||||||||||||||    
22775379 aattgaacatgaatcttatcacaattcaactacaacatagcataattcataaatttgaacaca-attcaacatatataactttctcatactttgaacatg 22775281  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || |||||||||||||||| | | |||||||| |||  ||||||  ||||||||    
22775280 aagtttcaccaacaacaattcaattaccaacaacttcatgcattcaaacataacatcataa 22775220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 22780757 - 22780598
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| |||||||||||||||  |||||| |||||||||||  || |||| || |  |||||||||||  |  |||||||||||||||||||    
22780757 aattgaacatgaatcttatcacaattcaactacaacatagcataattcataaatttgaacaca-attcaacatatataactttctcatactttgaacatg 22780659  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || |||||||||||||||| | | |||||||| |||  ||||||  ||||||||    
22780658 aagtttcaccaacaacaattcaattaccaacaacttcatgcattcaaacataacatcataa 22780598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 9653077 - 9653021
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 146  Q
    |||||||||||||  |||| |||||||  |||||| | |||||||||||||||||||    
9653077 attgatcatgaaaaatatcgcaattcatcaacaaccatgcataattcaccaattgag 9653021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 19433519 - 19433452
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt 143  Q
    |||||||||| || |||||| |||||  ||||  ||||||||||||||||| ||||||||||| |||||    
19433519 caacaacaac-atcaattgaacatgattcttacaacaattcaataacaacatagcataattcaacaatt 19433452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 24571572 - 24571532
Alignment:
43 ttttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||| |||||||| |||||| ||||||||||||||||||    
24571572 ttttaccaaaccaccaacaacatctcatttctcaacaacaa 24571532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 25305518 - 25305617
Alignment:
89 aattgatcatgaaacttatcacaattcaataa-caacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacat 186  Q
    |||||| |||||  |||| |||||||||| || ||||| ||||||||||| ||||| ||||||| || ||||| ||| ||  ||||||||||||||||||    
25305518 aattgaacatgactcttaccacaattcaacaatcaacatagcataattcaacaatttgagcataatt-caacacatatcactttctcatactttgaacat 25305616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 1376 - 1547
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || ||||| | || ||    
1376 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcatcacatacccatttttc 1474  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcat 246  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
1475 atactttgaacatgtaattcaaccaccaacaattcaattatccataacttcatacatctaaacatgtcatcat 1547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 11828 - 11668
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacat 186  Q
    ||||||||||||||||| ||||||||||  |||||||| ||||||||||| |||||||||||||||||||| ||||| | || ||||||  |||||||||    
11828 aattgatcatgaaacttttcacaattcatcaacaacaatgcataattcactaattgagcatattttcaacacatacccattt-tcatacactttgaacat 11730  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||||    
11729 gtaattcaaccaagaacaattcaattattcataacttcatacatctaaacatggcatcataa 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 20561805 - 20561646
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||    
20561805 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataatttcaacatataccaatttctcatactttgaacatgt 20561706  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
20561705 aattcaactaacaacaattcaattatctataacttcatacatccaaacatgtcatcataa 20561646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 20573380 - 20573207
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||   |||      
20573380 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattgagcatattttcaacacatacccttttcat 20573282  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
20573281 acactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacattcaaacatgtcatcataa 20573207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 20481665 - 20481837
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||| |||||| ||| | | || |||    
20481665 caacaacaac-atcaattgatcatgcaacttatcacaattcatcaacaacaaagtataattcaccaattgagcatattatcaacacatatccatttttca 20481763  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
20481764 tactttgaacatgtaattcaactaacaacaattcaattattcataacttcatacattcaaacatgtcatcataa 20481837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 20654079 - 20653944
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
20654079 aattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaattaagcatattttcaatatataccaatttctcatactttgaacatgt 20653980  T
189 gattcaactaacaacaattcaattatccataacttc 224  Q
     |||||||||||||||||||||||||||||||||||    
20653979 aattcaactaacaacaattcaattatccataacttc 20653944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 37611741 - 37611900
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
37611741 aattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 37611839  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
37611840 gtaattcaactaac-acaattcaattatttataacttcatacatctaaacatgtcatcataa 37611900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 41246718 - 41246889
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||| || |||||||| | || ||     
41246718 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattaagcatattt-catcatatacccatttttcc 41246815  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||| ||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||||| ||||||||    
41246816 tacttttaacatgtaattcaaccaacaacaatttaattattcataacttcatacatctaaacatgacatcataa 41246889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 20648003 - 20647882
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||    
20648003 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataatttcaacatataccaatttctcatactttgaacatgt 20647904  T
189 gattcaactaacaacaattcaa 210  Q
     |||||||||||||||||||||    
20647903 aattcaactaacaacaattcaa 20647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 21681075 - 21681235
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataa-ttcaccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    ||||||||||| ||||||    
21681075 aattgatcatgaaactaatcacaattcaacaacaacaaagcataatttaaccaattgagcatattttcaacatatacccttctctcatactttaaacatg 21681174  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      ||||||||||||| |||||||||||||||||  | ||||||  ||| ||||||||||||    
21681175 aaattcaactaacaataattcaattatccataaacttatacattcaaatatgtcatcataa 21681235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 19993228 - 19993070
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacat 186  Q
    ||||||| |||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||| || ||||| | || ||||||  ||||||||     
19993228 aattgatgatgaaatttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttca-cacatacccattt-tcatacactttgaacaa 19993131  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || |||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||    
19993130 gtaattcaactaaca-caattcaattattcataacttcgtacatctaaacatgtcatcataa 19993070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 22234977 - 22234819
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  ||||||| |||    
22234977 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactttgagcat 22234880  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||    
22234879 gtaattcaactaac-acaattaaattattcataacttcatacatctaaacacgtcatcataa 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 39446953 - 39446781
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttct- 172  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||| || |||||     
39446953 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcatattt-caacatataaca-cttctt 39446857  T
173 catactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||| ||||||  |||| ||||||||||||||||||||||| |||||||  |||  ||||||||||||||||    
39446856 catactttaaacatgaaattccactaacaacaattcaattatccacaacttcaagcattcaaacatgtcatcataa 39446781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 248
Target Start/End: Original strand, 22981351 - 22981505
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatgtgatt 192  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||||||  |||||||||||||||||||  |||    
22981351 atcatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatataccactttctcatactttgaacatgaaatt 22981449  T
193 caactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       |||||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
22981450 tctctaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 22981505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 38533709 - 38533881
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| |||||||||||  |||| |||||||||| ||||||||||||  |||||    
38533709 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaataatttgagcatattt-caacatataccattttctc 38533806  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||   |||||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
38533807 atactttgaacatgagatttctctaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 38533881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 23837258 - 23837430
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||  |||| |||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||    
23837258 caacaacaac-atcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatttgagcatagtt-caacatatatcactttctc 23837355  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  | ||||||||||||||||||| | |||||||| ||| ||||||| |||||||||    
23837356 atactttgaacatgaaatttcaataacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataa 23837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 21198339 - 21198167
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||  |||| |||||||||| ||||||| | ||||||||| ||||| ||||||| || ||||||||| ||  |||||    
21198339 caacaacaac-atcaattgaacatgattcttaccacaattcaacaacaacataacataattcaacaatttgagcataatt-caacatatatcactttctc 21198242  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  |||||| |||||||||    
21198241 atactttgaacatgaaatttcaccaacaacaattcaattatctacaacttcatgcattcaaacatatcatcataa 21198167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 25122618 - 25122671
Alignment:
192 tcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
25122618 tcaactagcaacaattcaattattcataacttcatacatctaaacatgtcatca 25122671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 17285341 - 17285436
Alignment:
153 ttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||| ||  |||||||||||||||||||  |||  || |||||||||||||||||| | |||||||| ||| ||||||| |||||||||    
17285341 ttcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataa 17285436  T

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Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 26011554 - 26011726
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||| | |||||| || |||||||||||| ||||||| |||| |||||| || || ||||||| || ||||||||| ||  ||| |    
26011554 caacaacaac-atcaattcaacatgaatctcatcacaattcaacaacaacatagcacaattcaacatttagagcataatt-caacatataacactttcac 26011651  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| |||  || ||||||||||||||||||   || ||||| |||  |||||| |||||||||    
26011652 atactttgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataa 26011726  T

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Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 274517 - 274577
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||    
274517 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacata 274577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 641332 - 641272
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||    
641332 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacata 641272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 827138 - 827078
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||    
827138 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacata 827078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 16039062 - 16039002
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | ||||||||||| |||||||||||    
16039062 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcata 16039002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 41506990 - 41506930
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
41506990 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 41506930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 39115349 - 39115409
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| |||||| |||||  |||||| | |||||||||||||||||||||||    
39115349 attgatcatgaaacatatcacgattcatcaacaactatgcataattcaccaattgagcata 39115409  T

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Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 5854674 - 5854846
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| |||| || ||| || || ||||||| || ||||||||| ||  |||      
5854674 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcacaactcaacatttagagcataatt-caacatataacactttcat 5854771  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || ||||||||||||||||||   || ||||| |||  |||||| |||||||||    
5854772 atactttgaacatgctatttcaccaacaacaattcaattatcgccaatttcatgcattcaaacatatcatcataa 5854846  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 24717043 - 24716983
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    ||||| ||||||||  |||||||||||  |||||| | |||||||||||||||||||||||    
24717043 attgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcata 24716983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 15933358 - 15933530
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| | || |||||| || || ||||||| || |||||| || ||  ||| |    
15933358 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaacatttagagcataatt-caacatttaacactttcac 15933455  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || ||||||||||||||||||   || ||||| |||  |||||| |||||||||    
15933456 atactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataa 15933530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 5854572 - 5854613
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||||||||||||| | ||||||||||| ||||||    
5854572 tcaacccattttacaaaaccaacaacaacaactcaattctca 5854613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 15933256 - 15933297
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||||||||||||| | ||||||||||| ||||||    
15933256 tcaacccattttacaaaaccaacaacaacaactcaattctca 15933297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 29306477 - 29306616
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||| | |||||| || |||||||||||| ||||||| |||| |||||| ||| |||||||||  ||||||||||| ||  ||| |    
29306477 caacaacaac-atcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaacaatttgagcata-attcaacatatatcattttcac 29306574  T
174 atactttgaacatgtgattcaactaacaacaattcaattatc 215  Q
    | |||||||||||   | |  || ||||||||||||||||||    
29306575 aaactttgaacatacaaattcaccaacaacaattcaattatc 29306616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 22736127 - 22736079
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||||  |||| |||||||||||||| ||| ||||||    
22736127 tcaacccattttacaaagtcaccaacaacaactcatttttcatcaacaa 22736079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 22751 - 22923
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| | || |||    
22751 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcatattttcaacacatacccatttttca 22849  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
22850 tactttgaacatgtaattcaactaacaacaattcaattattcaaaacttcatacatctaaacatgtcatcataa 22923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 1168391 - 1168219
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||| ||  ||||||    
1168391 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgagcatattttcaacatatatcattttctca 1168293  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||    
1168292 tactttgaacatgtaattcaactaacaaccattctattatccataacttcatacatccaaacatgtcatcataa 1168219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 24183320 - 24183147
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||      
24183320 tcaacaaca-ccatcaattgatcatgaaactcatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatatacccttttcat 24183222  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
24183221 acactttgaacatgtaattcgactaacaacaattcaattatccatgacttcatacatccaaacatgtcatcataa 24183147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 11337373 - 11337201
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| | ||||||||||||| |||||||||||||||||| |||||  ||||||    
11337373 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaaatgagcatattttcaacatttaccatattctca 11337275  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||    
11337274 tactttgaacatgtaattcaactaacaacaattcaattattcataacttcatacatccaaacatatcatcataa 11337201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 20712136 - 20712308
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||||| | || |||    
20712136 caacaacaac-atcaattgatcatgcaacttatcacaattcatcaacaacaaagcataattcaccaattgagcatattatcaacacatacccatttttca 20712234  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||    
20712235 tactttgaacatgtaattcaatcaacaacaattcagttatccataacttcatacatctaaacatgtcatcataa 20712308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 21397165 - 21397324
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
21397165 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 21397263  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
21397264 gtaattcaactaac-acaattcaattattcataacttcatacatctaaacatgtcatcataa 21397324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 19405610 - 19405770
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcacc-aattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||| | ||||||||||||||||||||||||||   |||||||||||||||||||    
19405610 aattgatcatgaaacttatcacaattcaacaacaacgaatcataattcaactaattgagcatattttcaacatatacccttttctcatactttgaacatg 19405709  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      ||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||    
19405710 aaattcaactaacaataattcaattatccataacttcatacattcaaatatgtcatcataa 19405770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 4865336 - 4865494
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||| ||||||||||||  ||| |||| ||||||||||||||||||||||||||||| |  ||||| | || |||||||||||||||      
4865336 aattgatcatgaaacatatcacaattcatcaaccacaatgcataattcaccaattgagcatattttcaccc-atacccatttttcatactttgaacatac 4865434  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
4865435 aattcaactaacaacaattcaatcattcataacttcatacatctaaacatgtcatcataa 4865494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 11584125 - 11584286
Alignment:
90 attgatcatgaaacttatcacaattcaataaca---acaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacat 186  Q
    |||||||||||||| ||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||   |||  | ||||  |||||    
11584125 attgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaattgagcatattttcaacatatacccttttcatacacttgaaacat 11584224  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |   |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||    
11584225 gaatttcaactaacaacaattcaattattcataacttcatacatccaaatatgtcatcataa 11584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 28261594 - 28261748
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca-acatataccaacttctcatactttgaacatg 187  Q
    |||||||||| |||| |||||||||| |  |||||||| ||||||||||||||||||||||||||||| ||||||      || |||||||||||||||     
28261594 aattgatcataaaacatatcacaatttatcaacaacaatgcataattcaccaattgagcatattttcacacatat------ttttcatactttgaacata 28261687  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
28261688 caattcaactaacaacaattcaatcattcataacttcatacatctaaacatgtcatcataa 28261748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 24475653 - 24475809
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacat 186  Q
    ||||||||||||||| ||  ||||||||  |||||||| ||||||||||||||||||||||||||||| || ||||| | || ||||||  |||||||||    
24475653 aattgatcatgaaacata--acaattcatcaacaacaatgcataattcaccaattgagcatattttca-cacatacccattt-tcatacactttgaacat 24475748  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
24475749 gtaattcaactaaca-caattcaattattcataacttcatacatctaaacatgtcatcataa 24475809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 21646913 - 21646755
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca-acatataccaacttctcatactttgaacatg 187  Q
    ||||||||||||||| ||||||||||||  |||||| |  ||||||||||||||||| |||||||||| |||||  |||  |||  | ||||| ||||||    
21646913 aattgatcatgaaacatatcacaattcatcaacaacgatacataattcaccaattgaacatattttcatacatac-ccattttcatacacttttaacatg 21646815  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
21646814 taattcaactaaca-caattcaattattcataacttcatacatctaaacatgtcatcataa 21646755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 3673922 - 3674094
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||||||  |||||    
3673922 caacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatataccactttctc 3674019  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||| ||||  |||   |||||||||||||||||||| | ||||| ||  ||  |||||| |||||||||    
3674020 atactttgatcatgaaatttccctaacaacaattcaattatcaacaacttaatgtattcaaacatatcatcataa 3674094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 76 - 248
Target Start/End: Original strand, 21906778 - 21906931
Alignment:
76 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat 175  Q
    ||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| ||||||||||                  |    
21906778 aacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcatcaattgaacatattttca------------------t 21906858  T
176 actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||    
21906859 actttgaacatgtaattcaaccaacatcaattcaattatccataacttcatatgtctaaacatgtcatcataa 21906931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 11583982 - 11584065
Alignment:
8 catcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
11583982 catcatcaaaaacaaacttcttcatcatcaacccattttacaaaaccacgaacaacaactcatttctcaacaacaatcatgaat 11584065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 16105573 - 16105656
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatga 89  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
16105573 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 16105656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 19862296 - 19862441
Alignment:
103 cttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 201  Q
    ||||||||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||||  |||  || ||||    
19862296 cttatcacaattcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctcatactttgaacatgaaatttcaccaaca 19862394  T
202 acaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| | |||||||| |||  |||||| |||||||||    
19862395 acaattcaattatcaacaacttcatgcattcaaacatatcatcataa 19862441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 7728480 - 7728619
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||| ||  |||||    
7728480 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatatatcactttctc 7728577  T
174 atactttgaacatgtgattcaactaacaacaattcaattatc 215  Q
    ||||||||||||||  |||  || |||||||| |||||||||    
7728578 atactttgaacatgaaatttcaccaacaacaaatcaattatc 7728619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 247
Target Start/End: Original strand, 23493979 - 23494150
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||||| ||||||  |||||| | ||||||||||| | |  ||    
23493979 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttcgcatatct-caacatatacctattcttc 23494076  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcata 247  Q
    |||||||||||||   |||| ||||| |||||||||||| |||| |||||||| |||   ||||||||||||||    
23494077 atactttgaacataaaattccactaataacaattcaattttccacaacttcatgcattcgaacatgtcatcata 23494150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 109158 - 109075
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatga 89  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
109158 acatcatcaaaatcaaacttcttctctatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 109075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 5451015 - 5450858
Alignment:
91 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||| ||||||  |||||||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||||      
5451015 ttgaacatgaattttatcacaattcaacaacaacatagcataattcatcaatttgagcataatt-caacatatatcactttctcatactttgaacatgaa 5450917  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||  || |||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
5450916 atttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 5450858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 21650769 - 21650829
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
21650769 attgatcatgaaacttatcacaattcaacaacaaccatgcataattcaccaattgagcata 21650829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 16595581 - 16595739
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||| |||||| || | || ||||||| | ||||| | |||||||||| | |||||||||||| ||||||||||||  |||||||||||||||||||     
16595581 aattgaacatgaatctcaacataattcaacatcaacataacataattcacaatttgagcatattt-caacatataccactttctcatactttgaacatga 16595679  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||   ||| |||||||||||||||| | |||||||| |||  ||||||  ||||||||    
16595680 aatttctctatcaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 16595739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 432523 - 432695
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| |||| |||||| ||| ||||||| || |||||||| ||||| ||||||| || ||||||||| ||  |||||    
432523 caacaacaac-atcaattgaacatgaatcttaccacaatccaacaacaacatagtataattcatcaatttgagcataatt-caacatatatcattttctc 432620  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||   ||  || |||||||||||||||||| | |||| ||| |||  |||||| |||||||||    
432621 atactttgaacatgaagtttcaccaacaacaattcaattatcaacaactacatgcattcaaacatatcatcataa 432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 28902264 - 28902423
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| |||||||||  ||||||||||| ||  ||||||||||||||||| |    
28902264 aattgaacatgaatcttatcacaattcaacaacaacatagcataattgatcaatttgagcata-attcaacatatatcactttctcatactttgaacacg 28902362  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || |||||||||||||||||| | ||||| || |||  ||||||  ||||||||    
28902363 aagtttcaccaacaacaattcaattatcaacaactttatgcattcaaacataacatcataa 28902423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 28938659 - 28938818
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| |||||||||  ||||||||||| ||  ||||||||||||||||| |    
28938659 aattgaacatgaatcttatcacaattcaacaacaacatagcataattgatcaatttgagcata-attcaacatatatcactttctcatactttgaacacg 28938757  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
       ||  || |||||||||||||||||| | ||||| || |||  ||||||  ||||||||    
28938758 aagtttcaccaacaacaattcaattatcaacaactttatgcattcaaacataacatcataa 28938818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 2031884 - 2031944
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
2031884 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 2031944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 11342759 - 11342819
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
11342759 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 11342819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 21205000 - 21205060
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
21205000 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 21205060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 21222795 - 21222623
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| |||| |||| | || || |||||||  ||||||||||| ||  |||      
21222795 caacaacaac-attaattgaacatgaatcttatcacaattcaacaacaacatagcacaattaaacatttagagcata-attcaacatataacactttcat 21222698  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||| |||||||   || ||||| |||  |||||| |||||||||    
21222697 atactttgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcatcataa 21222623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 24225634 - 24225596
Alignment:
8 catcatcaaattcaaacttcttcattatcaacccatttt 46  Q
    |||||||||| ||||||||||||||||||||||||||||    
24225634 catcatcaaaatcaaacttcttcattatcaacccatttt 24225596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 21617076 - 21617248
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| || | |||||| || || |||||||  ||||||||||| ||  |||      
21617076 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagaacaattcaacatttagagcata-gttcaacatataacactttcat 21617173  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||| |||||||  |||  |||||||||||| ||||||||   || ||||| |||  |||||| |||||||||    
21617174 atacttggaacatgcaatttcactaacaacaatccaattatcaccaatttcatgcattcaaacatatcatcataa 21617248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 23466517 - 23466558
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaa 117  Q
    |||||||||| || |||||||||||||||||||||||||||||    
23466517 caacaacaac-atcaattgatcatgaaacttatcacaattcaa 23466558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32966436 - 32966390
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac 81  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||||    
32966436 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaac 32966390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 23466558 - 23466660
Alignment:
137 accaattgagcatattttcaacatataccaactt-ctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaa 235  Q
    ||||||||||||||||| ||||||| ||||  || |||||||||||| ||||   ||  || ||||||||||||||||| ||||||||| |||||  |||    
23466558 accaattgagcatattt-caacatacaccatttttctcatactttgatcatgaagtttcaccaacaacaattcaattat-cataacttcttacatacaaa 23466655  T
236 catgt 240  Q
    |||||    
23466656 catgt 23466660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 81 - 251
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||| ||  |||||||||||| |||||||||||||||||||||||||||| ||||||    
81 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaaccacgtagcataattcacgaattgagcatattttcaacatataccaatttctca 179  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcat 246  Q
    |||||||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
180 tactttgaacatgcaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcat 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 115; Significance: 2e-58; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 94 - 248
Target Start/End: Original strand, 21590 - 21743
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattc 193  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
21590 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccattttctcatactttgaacatgtaattc 21689  T
194 aactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
21690 aactaacaacaatccaattat-cataacttcatacatccaaacatgtcatcataa 21743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 31284 - 31442
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||| ||||||||||||||||||||  ||||||| || |||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| |    
31284 aattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattgagcatattttcaacatataccattttctcatactttgaacattt 31383  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
31384 aattcaactaacaacaatccaattat-cataacttcatacatccaaacatgtcatcataa 31442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 21442 - 21518
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
21442 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttcttaacaacaa 21518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 31141 - 31217
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
31141 acatcatcaaaatcaaactttttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaa 31217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 24901 - 24743
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| ||||||| ||||| | || |||||||||||||||||     
24901 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatatgttcaacacatacccatttttcatactttgaacatgta 24802  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
24801 attcaactaacaacaatttaattatcaataacttcatacatctaaacatgtcatcataa 24743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 95049 - 95109
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | ||||||||||| |||||||||||    
95049 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcata 95109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 146675 - 146833
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
146675 attgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 146774  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
146775 attcaactaacaacagttcaattatacataacttcatacatctaaacatgtcatcataa 146833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 53420 - 53545
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||| |||||| || |||||||||||  ||||| | ||||||||| | || || ||||||| || ||||||||| || |||| |||||||||||||||     
53420 attgaacatgaatctcatcacaattcatcaacaaaatagcataattgaacatttagagcataatt-caacatataacaccttcacatactttgaacatgc 53518  T
189 gattcaactaacaacaattcaattatc 215  Q
     |||  || ||||||||||||||||||    
53519 aatttcaccaacaacaattcaattatc 53545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 115; Significance: 2e-58; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 75 - 245
Target Start/End: Complemental strand, 132437 - 132268
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||| ||||| | || |||    
132437 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacgatgcataattcaccaattgagcatattttcaacacatacccatttttca 132339  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
132338 tactttgaacatataattcaacaaacaacaattcaattatccataacttcatacatctaaacatgtcatca 132268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 88349 - 88507
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||| ||||| | || |||||||||||||||||     
88349 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgatcatattttcaacacatacccatttttcatactttgaacatgta 88448  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||    
88449 attcaactaacaacattttaattattcataacttcatacatctaaacatgtcatcataa 88507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 11747 - 11920
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||| ||||||||  ||| |   |||||    
11747 caacaacaac-atcaattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgagcatgttttcaactcatatctttttctc 11845  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
11846 atactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattgaaacatgtcatcataa 11920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 16022 - 16131
Alignment:
139 caattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacat 238  Q
    |||| |||||||||||||||  ||| ||  |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||    
16022 caatggagcatattttcaactcatatcattttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattcaaacat 16121  T
239 gtcatcataa 248  Q
    ||||||||||    
16122 gtcatcataa 16131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 25553 - 25662
Alignment:
139 caattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacat 238  Q
    |||| |||||||||||||||  ||| ||  |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||    
25553 caatggagcatattttcaactcatatcattttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattaaaacat 25652  T
239 gtcatcataa 248  Q
    ||||||||||    
25653 gtcatcataa 25662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 763 - 591
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||    
763 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcatattttcaacatataccattttctca 665  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||  ||||||||||||||||    
664 tactttgaacatgtaattcaattaacaacaattctattatccataatttcatacattcaaacatgtcatcataa 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 33722 - 33894
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||| | |||| |||||||||||||||| ||||||    
33722 caacaacaac-atcaattgatcatgaaacttatcaaaattcatcaacaacatagcataattcaccaattaaacataatttcaacatataccaatttctca 33820  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
33821 tactttgaacatgtaattcaactaacaacaattcaattatctataacttcatacattcaaacatgtcatcataa 33894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 113; Significance: 2e-57; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 70686 - 70845
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| |||  |||||||||||||||||||    
70686 aattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaaccaattaagcatattttcaacatattccattttctcatactttgaacatg 70785  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
70786 a-attcaactaacaacaattcaattatccataacttcatacatccaaacatgacatcataa 70845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 31117 - 31275
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataa-ttcaccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||| |||||||||||||||||||||||| ||| ||||| ||||| || || |||||||||||||||||||||||||||  |||| ||||||||||||||    
31117 aattaatcatgaaacttatcacaattcaacaactacaaa-cataacttaacaaattgagcatattttcaacatataccattttcttatactttgaacatg 31215  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
31216 a-attcaactaaccacaattcaattatccataacttcatacatccaaacatgtcatcataa 31275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 97372 - 97246
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||| || |||| ||||||| | ||||| ||||||||||| || || ||||||| || ||||||||| ||  ||| |||||||||||||||    
97372 aattgaacatgaatctcatcataattcaacaccaacatagcataattcaacatttagagcataatt-caacatataacactttcacatactttgaacatg 97274  T
188 tgattcaactaacaacaattcaattatc 215  Q
      |||| || ||||||||||||||||||    
97273 caattccaccaacaacaattcaattatc 97246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 1455 - 1613
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 189  Q
    |||||||||||||||||||||||||||  ||  ||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |     
1455 attgatcatgaaacttatcacaattcatcaatcacataacataattcaacaattgagcatattttcaacatataccaatttctcatactttgaacatata 1554  T
190 attcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
1555 attcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataa 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 60865 - 61038
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| |||| ||||| | || ||    
60865 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagtatatttttaacacatacccatttttc 60963  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||||||||||||| |||||||    
60964 atactttgaacatgtaattcaaccaacaacaattcaattattcataacatcatacatctaaacatgttatcataa 61038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 92 - 248
Target Start/End: Complemental strand, 70793 - 70636
Alignment:
92 tgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgat 191  Q
    |||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||    
70793 tgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcatattttcaacacatacctacttttcatactttgaacatgtaat 70694  T
192 tcaactaacaacaattcaattatcca-taacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||| || |||||||| || |||||||||||||||||||||||||||||||    
70693 tcaactaacaataaatcaattattcattaacttcatacatctaaacatgtcatcataa 70636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 75 - 245
Target Start/End: Complemental strand, 11895 - 11726
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||  ||||| | || |||    
11895 caacaacaac-atcaattgatcatgaaacttatcaaaattcatcaacaacaatgcataattcaccaattgagcatattttcaactaatacccatttttca 11797  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
11796 tactttgaacatgtaattcatccaacaacaattcaattattcataacttcatacatctaaacatgtcatca 11726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 996 - 837
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||||||||||||||||||| |||  || ||||| |||||||||||||||||||||||||||||||  ||||| | || |||||||||||||||||    
996 aattgatcatgaaacttatcacaaatcatcaataacaatgcataattcaccaattgagcatattttcaactcatacccatttttcatactttgaacatgt 897  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
896 aattcatctaacaacaatccaattattcataacttcatacatctaaacatgtcatcataa 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 241
Target Start/End: Complemental strand, 7019 - 6867
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  ||| |||||||    
7019 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactctgaacat 6922  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtc 241  Q
    || ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||    
6921 gtaattcaaccaacaacaattcaactattcataacttcatacatctaaacatgtc 6867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 38371 - 38530
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||| | ||||| | ||||||||||||    
38371 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcgccaattgagcatattttcaacatatacccatttctcttcctttgaacatgt 38470  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     ||||||| ||||| ||||||||||| ||||| |||||| ||||||||||||||||||||    
38471 aattcaaccaacaaaaattcaattattcataaattcataaatctaaacatgtcatcataa 38530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 203 - 376
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||      
203 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatatacccttttcat 301  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    | ||||  ||||||   |||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
302 acacttgaaacatgaatttcaaccaacaacaattcaattattcataacttcatacatccaaacatgtcatcataa 376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 75 - 159
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||    
75 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaacaacaacaactcatttctcagcaacaatcatgaat 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 103; Significance: 2e-51; HSPs: 3)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 9069 - 8897
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||||||||||||||||||||||| || ||||||| ||||||||||| |||||||||||||| | ||||||||| ||  |||||    
9069 caacaacaac-atcaattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgagcatatat-caacatatatcattttctc 8972  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
8971 atactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattcaaacatgtcatcataa 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 5433 - 5262
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||| ||||||||||||  |||||||| || |||||||||||||||||||||||||  || ||||| | || |||    
5433 caacaacaac-atcaattgatcatgaaacatatcacaattcatcaacaacaatgcctaattcaccaattgagcatattttcg-cacatacctattt-tca 5337  T
175 tac--tttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||  ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||    
5336 tacactttgaacatgtaattcaactaaca-caattcaattattcataacttcatacatctaaacatctcatcataa 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 9156 - 9123
Alignment:
50 aaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||||||||||||| ||||||||||||||||||    
9156 aaaccaccgacaacatctcatttctcaacaacaa 9123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 7629 - 7791
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 174  Q
    |||||||||| || ||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||||||||||| |||||||| | || |||    
7629 caacaacaac-atcaattgatcatgaaacttatcataatttatcaacaacaatgcataattcaccaattgagcatattttcatcatatacccatttttca 7727  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacat 238  Q
    |||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||    
7728 tactttgaacatgtaattcaaccaacaacaattcaattatttataacttcatacatctaaacat 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 4623 - 4796
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||  |||||  ||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||    
4623 caacaacaac-atcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttc 4721  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
4722 atactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataa 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 9237 - 9410
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||  |||||  ||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||    
9237 caacaacaac-atcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttc 9335  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
9336 atactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataa 9410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 255002 - 254832
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||    
255002 tcaacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttc 254905  T
174 at--actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    ||  ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
254904 atacactttgaacatgtaattcaact-acaacaattcaattattcataacttcatacatctaagcatgtcatca 254832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 261608 - 261438
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 173  Q
    ||||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||    
261608 tcaacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttc 261511  T
174 at--actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    ||  ||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||| ||||||||||    
261510 atacactttgaacatgtaattcaact-actacaattcaattattcataacttcatacatctaagcatgtcatca 261438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 104 - 248
Target Start/End: Original strand, 7260 - 7405
Alignment:
104 ttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaa 202  Q
    ||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||||||||||||||||| ||||||| |||||    
7260 ttatcacaattaaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatgtaattcaaccaacaa 7359  T
203 caattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
7360 caattcaattattcataacttcatacatctaaacatgtcatcataa 7405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 25031 - 25190
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||   |||  | ||||  ||||||     
25031 aattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcatattttcaacatatacccttttcctacacttgaaacatga 25130  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
25131 atttcaactaacaacaattcaattattcataacttcatacatccaaacatgtcatcataa 25190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 25284 - 25443
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||   |||  | ||||  ||||||     
25284 aattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcatattttcaacatatacccttttcctacacttgaaacatga 25383  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
25384 atttcaactaacaacaattcaattattcataacttcatacatccaaacatgtcatcataa 25443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 24890 - 24974
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
24890 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaat 24974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 48220 - 48378
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||| |||| ||||| | || |||||||||||||||      
48220 aattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttt-aacacatacccatttttcatactttgaacataa 48318  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||    
48319 aattcaactaacaacaattcaatcattcataacttcatacatctaaacatttcatcataa 48378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 61668 - 61826
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 188  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||| |||| ||||| | || |||||||||||||||      
61668 aattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttt-aacacatacccatttttcatactttgaacataa 61766  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||    
61767 aattcaactaacaacaattcaatcattcataacttcatacatctaaacatttcatcataa 61826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 1976 - 2148
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || ||||||||||||| ||||| |||| |||| |||| || ||||||||||| ||||||||||||||||||| |||||||||  ||| |    
1976 caacaacaac-atcaattgatcatgaatcttataacaaatcaacaaca-catagcataattcaaccaattgagcatattttcatcatataccattttcgc 2073  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
2074 atactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattcaaacatgtcatcataa 2148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 15645 - 15486
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc-atactttgaacatg 187  Q
    ||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||| || ||||| | || |  |||||||||||||     
15645 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttca-cacatacccatttttttatactttgaacata 15547  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
15546 caattcaactaacaacaattcaattgtccataacttcatacatctaaacatgtcatcataa 15486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 46239 - 46395
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaac--ttctcatactttgaacatg 187  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  ||| |||||||||| ||||    
46239 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttc-acata-acccacttttcacatactttgatcatg 46336  T
188 -tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
      | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
46337 aagtttcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 46395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 40732 - 40891
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca--tactttgaacatg 187  Q
    ||||||||||||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||| ||| |||| |||  |||||||| ||||    
40732 attgatcatgaaacttatcacaatgtaacaacaatatagcataattcaccaattgagcatattttca-cata-acccacttttcacatactttgatcatg 40829  T
188 t-gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
40830 aagtttcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 40891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 79942 - 79998
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||||||||||||  |||||  | |||||||||||||||||||||||    
79942 atcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 79998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 248
Target Start/End: Original strand, 164290 - 164446
Alignment:
91 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacatgt 188  Q
    ||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||| |||| || ||||| | || ||||||  |||||||||||    
164290 ttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatcttca-cacatacccattt-tcatacactttgaacatgt 164387  T
189 gattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
164388 aattcaactaaca-caattcaattattcataacttcatacatctaaacatgtcatcataa 164446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 162359 - 162299
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | ||| |||||||||||||||||||    
162359 attgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcata 162299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 166445 - 166385
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | ||| |||||||||||||||||||    
166445 attgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcata 166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 14947 - 15105
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  |||||||||||    
14947 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactttgaacat 15044  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
15045 gtaatctaactaac-acaattcaattattcataacttcatacatctaaacatgtcatcataa 15105  T

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Target: scaffold0342 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 6000 - 6174
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaactt-ct 172  Q
    |||||||||| || |||||| ||||||  |||||||||||||| ||| ||| ||||||||| | |||||||||||||||||||||||||||||  || ||    
6000 caacaacaac-atcaattgaacatgaatattatcacaattcaacaaccacatagcataatttaaccaattgagcatattttcaacatataccatttttct 6098  T
173 catactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||||  |||| || ||||||||| |||||||||||||||||||||||  ||||||||| ||||||    
6099 catactttgaacatgaaattctaccaacaacaatccaattatccataacttcatacattcaaacatgtcgtcataa 6174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 632 - 572
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
632 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 245
Target Start/End: Original strand, 20275 - 20402
Alignment:
119 aacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacatgtgattcaactaacaacaattcaattatcc 216  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | | || ||||  |||||||||||   ||||||||||||||||||||||||| |    
20275 aacaacaaagcataattaaccaattgagcatattttcaacatatatcta-ttttcatacactttgaacatacaattcaactaacaacaattcaattattc 20373  T
217 ataacttcatacatctaaacatgtcatca 245  Q
    |||||||||||||||||||||||||||||    
20374 ataacttcatacatctaaacatgtcatca 20402  T

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Target: scaffold0095 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 33915 - 33743
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttct- 172  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||| || |||||     
33915 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcatattt-caacatataaca-cttctt 33819  T
173 catactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||| ||||||  |||| ||||||||||||||||||||||| |||||||  |||  ||||||||||||||||    
33818 catactttaaacatgaaattccactaacaacaattcaattatccacaacttcaagcattcaaacatgtcatcataa 33743  T

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Target: scaffold0740 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 4358 - 4516
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 186  Q
    |||||||||| |||||||||||||||||  |||||||| |||||||||||||||||| ||||||||| ||| ||||| | || ||||  |||||||||||    
4358 aattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattgaacatattttc-acacataccca-ttttcatacactttgaacat 4455  T
187 gtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||||||||| ||||||||||||| ||||| || ||||||||||||||||||| ||||    
4456 gtaattcaactaac-acaattcaattattcataatttgatacatctaaacatgtcattataa 4516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 3230 - 3314
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaaccatgaat 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
3230 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaat 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 3358 - 3399
Alignment:
74 tcaacaacaaccatgaattgatcatgaaacttatcacaattca 116  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
3358 tcaacaacaac-atcaattgatcatgaaacttatcacaattca 3399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 3392 - 3551
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataatt-caccaattgagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    ||||||||||||| |||||||||||||||  |||||| |||||||||  ||||||||||||||||||| ||||||||||  ||||||||||||||||||     
3392 aattgatcatgaatcttatcacaattcaactacaacatagcataattggaccaattgagcatattttc-acatataccactttctcatactttgaacatt 3490  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||   |||||||||||||||||||  |||||||||| |||  ||||||  ||||||||    
3491 aaatttctctaacaacaattcaattataaataacttcatgcattcaaacataacatcataa 3551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 28466 - 28535
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
28466 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctca 28535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 21637 - 21687
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccacc 57  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
21637 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccacc 21687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 28629 - 28768
Alignment:
109 acaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaatt 207  Q
    ||||||||| ||||||| | ||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||| | |||  || ||||||||||    
28629 acaattcaacaacaacataccataattcaacaatttgagcataatt-caacatatatcactttctcatactttgaacatataatttcaccaacaacaatt 28727  T
208 caattatccataacttcatacatctaaacatgtcatcataa 248  Q
    || ||||| | || ||||| |||  |||||| |||||||||    
28728 cagttatcaacaagttcatgcattcaaacatatcatcataa 28768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 704 - 618
Alignment:
76 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatata 163  Q
    ||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||    
704 aacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcatattttcaacatata 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 130486 - 130569
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaaccatga 89  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
130486 acatcatcaaaatcaaacttcttctttattaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 130569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 89655 - 89584
Alignment:
76 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagca 148  Q
    ||||||||| || ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
89655 aacaacaac-atcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgagca 89584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 20041 - 19972
Alignment:
176 actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
20041 actttgaacatacaattcaactaacaacaattcaattattcataacttcatacatctaaacatgtcatca 19972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 24345 - 24276
Alignment:
176 actttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatca 245  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
24345 actttgaacatacaattcaactaacaacaattcaattattcataacttcatacatctaaacatgtcatca 24276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 248
Target Start/End: Complemental strand, 7199 - 7040
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||  ||||||||||| ||||||||||| | ||||||| | ||||| ||||||| || ||||||||| ||  ||||||||||||||||||     
7199 aattgaacatgattcttatcacaatccaataacaacataacataattaaacaatttgagcataatt-caacatatatcactttctcatactttgaacatt 7101  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||  ||||||||||||||||||||| | |||||||| |||  |||||| |||||||||    
7100 aaatttcactaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataa 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 77034 - 76862
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || | |||||||||| ||||||| ||||||||||| ||||| || |||| || ||||||||| ||  |||||    
77034 caacaacaac-atcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaacaatttgaacataatt-caacatatatcactttctc 76937  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || |||||||||||||||||| | || ||||| |||  |||||| |||||||||    
76936 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaatttcatgcattcaaacatatcatcataa 76862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 77129 - 77088
Alignment:
42 attttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||| ||||||||||| |||||||||||||||||| ||||||    
77129 atttcacaaaaccaccaacaacaactcatttctcatcaacaa 77088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 35551 - 35708
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||  |||| |||| ||||| ||||||| ||||||| ||| ||||| ||| ||| || ||||||||| ||  |||||||||||||||||||    
35551 aattgaacatgactcttaccacatttcaacaacaacatagcataaatcaacaatttgagtataatt-caacatatatcactttctcatactttgaacatg 35649  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcat 246  Q
      |||  ||||||||||||||||||||| |||||||||| |||  |||||| |||||||    
35650 aaatttcactaacaacaattcaattatcaataacttcatgcattcaaacatatcatcat 35708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 248
Target Start/End: Complemental strand, 2502 - 2331
Alignment:
76 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctca 174  Q
    ||||||||| || |||||| |||||  ||||||| ||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||  ||  ||||||    
2502 aacaacaac-atcaattgaacatgagtcttatcataattcaacaacaacatagcataattcatcaatttgagcataatt-caacatatgtcactttctca 2405  T
175 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    |||||||||||||  |||  || |||||||||||||||||| | |||||||| |||  ||||||  ||||||||    
2404 tactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataa 2331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 32276 - 32344
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaa 157  Q
    ||||||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||||||||    
32276 aattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcatattttcaa 32344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 42027 - 41959
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaa 157  Q
    ||||||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||||||||    
42027 aattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcatattttcaa 41959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 7927 - 8037
Alignment:
137 accaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaac 236  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||   |||||||||||||||||||  |||||||||| |||  ||||    
7927 accaattgagcatattttca-catataccactttctcatactttgaacatgaaatttctctaacaacaattcaattataaataacttcatgcattcaaac 8025  T
237 atgtcatcataa 248  Q
    ||  ||||||||    
8026 ataacatcataa 8037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 6734 - 6893
Alignment:
89 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 187  Q
    |||||| |||||  |||| |||||||||| || | || ||||||||||| ||||| ||||| | || ||||||||| ||  |||||||||||||||||||    
6734 aattgaacatgactcttaccacaattcaacaatagcatagcataattcaacaatttgagcaaaatt-caacatatatcactttctcatactttgaacatg 6832  T
188 tgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
      |||  || |||||||||||||||||| | |||||||| |||  |||||| |||||||||    
6833 aaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataa 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 6622 - 6667
Alignment:
38 acccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||    
6622 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaa 6667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 17585 - 17525
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
17585 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 17525  T

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Target: scaffold0032 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 55655 - 55715
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
55655 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 55715  T

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Target: scaffold0032; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 93893 - 93788
Alignment:
142 ttgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtc 241  Q
    |||||||||||| ||||| ||||||  |||||||||||||||||||  |||   |||||||| ||||||||||| | |||||||| |||  | |||| ||    
93893 ttgagcatattt-caacaaataccattttctcatactttgaacatgaaatttctctaacaaccattcaattatcaaaaacttcatgcatacatacatatc 93795  T
242 atcataa 248  Q
    |||||||    
93794 atcataa 93788  T

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Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 94061 - 94013
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    |||||||||||||||||  |||| |||||| ||||||||||| ||||||    
94061 tcaacccattttacaaagtcaccaacaacatctcatttctcaccaacaa 94013  T

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Target: scaffold0700 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 2585 - 2757
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| ||||||||||| || || ||||||| || ||||||||| ||  |||      
2585 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacatagcataattcaacatttagagcataatt-caacatataacactttcat 2682  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||||||  |||  || ||||||||||||||||||   || ||||| |||| |||||| |||||||||    
2683 atactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatcatcataa 2757  T

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Target: scaffold0706 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 6724 - 6664
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    ||||||||| |||||||||||||||||  |||||| | |||||||||||||||||||||||    
6724 attgatcatcaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 6664  T

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Target: scaffold0686 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 6264 - 6204
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
6264 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 6204  T

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Target: scaffold0597 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 1159 - 1099
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
1159 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 1099  T

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Target: scaffold0251 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 13567 - 13507
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
13567 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 13507  T

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Target: scaffold0251; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 21541 - 21481
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
21541 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 21481  T

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Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 31461 - 31401
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
31461 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 31401  T

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Target: scaffold0175 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 15023 - 15083
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
15023 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15083  T

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Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 41383 - 41443
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
41383 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 41443  T

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Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 13048 - 12990
Alignment:
10 tcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccaccgacaacaact 67  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||    
13048 tcatcaaaatcaaacttcttcattatcaacccattttcacaaaaccatcaacaacaact 12990  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 197440 - 197268
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| || | |||||| || || ||||||| || |||| |||| ||  ||| |    
197440 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacataggacaattcaacatttagagcataatt-caacttataacactttcac 197343  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||||||| ||  |||  || |||||||||||||||||| | || |||||||||  |||||| |||||||||    
197342 atactttgaacttgcaatttcaccaacaacaattcaattatcaacaatttcatacattcaaacatatcatcataa 197268  T

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Target: scaffold0465 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10147 - 10094
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt 143  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||| ||||||    
10147 attgatcatgaaacttatcacaattcatcaacaaccaagcataattcgccaatt 10094  T

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Target: scaffold0574 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 9688 - 9628
Alignment:
90 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||||||||||||||||  |||||| | |||||| |||| |||||||||||    
9688 attgatcatgaaacttatcacaattcatcaacaaccatgcataagtcactaattgagcata 9628  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 69517 - 69689
Alignment:
75 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 173  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| |||| |||||| || || |||||||  ||||||||||| ||  ||| |    
69517 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcacaattcaacatttagagcata-attcaacatataacactttcac 69614  T
174 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataa 248  Q
    ||||||| ||||||  |||  ||  ||||||||||||||||    || ||||| ||| ||||||| |||||||||    
69615 atactttaaacatgcaatttcacctacaacaattcaattataaccaatttcatgcatttaaacatatcatcataa 69689  T

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Target: scaffold1272 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 270 - 315
Alignment:
38 acccattttacaaaaccaccgacaacaactcatttctcaacaacaa 83  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||    
270 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaa 315  T

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Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 44087 - 44046
Alignment:
35 tcaacccattttacaaaaccaccgacaacaactcatttctca 76  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
44087 tcaacccattttacaaaaccaacaacaacaactcatttctca 44046  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 12697 - 12641
Alignment:
94 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||| ||||||||||||  |||||  | |||||||||||||||||||||||    
12697 atcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 12641  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 12694 - 12734
Alignment:
7 acatcatcaaattcaaacttcttcattatcaacccatttta 47  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
12694 acatcatcaaaatcaaacttcttcactatcaacccatttta 12734  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 3427 - 3392
Alignment:
7 acatcatcaaattcaaacttcttcattatcaaccca 42  Q
    ||||||||||| ||||||||||||||||||||||||    
3427 acatcatcaaaatcaaacttcttcattatcaaccca 3392  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 186706 - 186647
Alignment:
90 attgatcatgaaacttatcacaattcaat-aacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| |||||||||  ||| |||||| | |||||||||||||||||||||||    
186706 attgatcatgaaacatatcacaat--aatcaacaaccatgcataattcaccaattgagcata 186647  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 193668 - 193609
Alignment:
90 attgatcatgaaacttatcacaattcaat-aacaacaaagcataattcaccaattgagcata 150  Q
    |||||||||||||| |||||||||  ||| |||||| | |||||||||||||||||||||||    
193668 attgatcatgaaacatatcacaat--aatcaacaaccatgcataattcaccaattgagcata 193609  T

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Target: scaffold0816 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 216 - 245
Target Start/End: Complemental strand, 3112 - 3083
Alignment:
216 cataacttcatacatctaaacatgtcatca 245  Q
    ||||||||||||||||||||||||||||||    
3112 cataacttcatacatctaaacatgtcatca 3083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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