View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6131_high_127 (Length: 245)

Name: NF6131_high_127
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6131_high_127
NF6131_high_127
[»] chr4 (8 HSPs)
chr4 (1-227)||(18731380-18731606)
chr4 (1-227)||(18699276-18699502)
chr4 (1-227)||(18723961-18724187)
chr4 (1-227)||(18679443-18679669)
chr4 (1-227)||(18655353-18655579)
chr4 (9-115)||(18073842-18073948)
chr4 (9-68)||(17989088-17989147)
chr4 (11-110)||(5090960-5091059)
[»] chr8 (1 HSPs)
chr8 (1-227)||(29273659-29273885)
[»] chr1 (3 HSPs)
chr1 (1-227)||(268233-268459)
chr1 (4-227)||(28164239-28164461)
chr1 (1-227)||(28127555-28127781)
[»] chr6 (65 HSPs)
chr6 (1-227)||(26646551-26646777)
chr6 (1-227)||(26752519-26752745)
chr6 (9-228)||(25579799-25580018)
chr6 (9-219)||(26656069-26656279)
chr6 (9-219)||(26762040-26762250)
chr6 (9-228)||(26056006-26056225)
chr6 (9-228)||(26075976-26076195)
chr6 (9-228)||(26142945-26143164)
chr6 (9-219)||(26823920-26824130)
chr6 (10-228)||(27337953-27338171)
chr6 (10-228)||(27398693-27398911)
chr6 (9-228)||(25538620-25538839)
chr6 (9-146)||(26623056-26623193)
chr6 (9-146)||(26729034-26729171)
chr6 (1-115)||(27679018-27679132)
chr6 (1-218)||(27718277-27718494)
chr6 (9-228)||(25481822-25482041)
chr6 (9-164)||(26048925-26049080)
chr6 (9-164)||(26070094-26070249)
chr6 (1-100)||(27677630-27677729)
chr6 (1-115)||(27611003-27611117)
chr6 (1-114)||(27593022-27593135)
chr6 (1-150)||(27724811-27724960)
chr6 (1-98)||(27706420-27706517)
chr6 (4-148)||(26937169-26937313)
chr6 (1-133)||(28139613-28139745)
chr6 (1-100)||(27698510-27698609)
chr6 (1-115)||(26884235-26884351)
chr6 (1-110)||(27604711-27604820)
chr6 (1-115)||(28781211-28781325)
chr6 (10-115)||(27531198-27531303)
chr6 (10-228)||(27214498-27214719)
chr6 (10-228)||(27234509-27234730)
chr6 (1-115)||(26802514-26802628)
chr6 (9-115)||(27427607-27427713)
chr6 (9-114)||(31284368-31284473)
chr6 (4-103)||(28150012-28150111)
chr6 (4-103)||(28242879-28242978)
chr6 (13-227)||(26949745-26949959)
chr6 (9-115)||(26861696-26861799)
chr6 (4-103)||(28181189-28181288)
chr6 (1-227)||(28786350-28786576)
chr6 (1-227)||(28792471-28792697)
chr6 (7-75)||(26341975-26342043)
chr6 (10-105)||(26848741-26848836)
chr6 (4-103)||(28185441-28185540)
chr6 (4-103)||(28227025-28227124)
chr6 (10-56)||(2184369-2184415)
chr6 (11-105)||(25071741-25071835)
chr6 (11-56)||(26975134-26975179)
chr6 (4-69)||(28297760-28297825)
chr6 (4-69)||(28514248-28514313)
chr6 (4-56)||(28234639-28234691)
chr6 (11-77)||(2184980-2185046)
chr6 (175-228)||(26617868-26617921)
chr6 (175-228)||(26723796-26723849)
chr6 (175-228)||(26811755-26811808)
chr6 (139-227)||(25506873-25506961)
chr6 (4-64)||(28325556-28325616)
chr6 (10-56)||(27665177-27665223)
chr6 (10-56)||(28098429-28098475)
chr6 (73-147)||(29826171-29826245)
chr6 (2-47)||(25506978-25507023)
chr6 (175-219)||(28297610-28297654)
chr6 (175-219)||(28514419-28514463)
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-227)||(4560-4786)
scaffold0277 (1-227)||(13521-13747)
[»] scaffold0349 (2 HSPs)
scaffold0349 (1-150)||(14322-14470)
scaffold0349 (1-115)||(3422-3537)
[»] scaffold0003 (1 HSPs)
scaffold0003 (9-115)||(59650-59756)
[»] scaffold0419 (1 HSPs)
scaffold0419 (1-227)||(7597-7823)
[»] scaffold0038 (4 HSPs)
scaffold0038 (4-103)||(43041-43140)
scaffold0038 (4-103)||(34800-34899)
scaffold0038 (4-103)||(27523-27622)
scaffold0038 (4-64)||(116871-116931)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-147)||(58251-58394)
[»] chr2 (2 HSPs)
chr2 (4-56)||(3279763-3279815)
chr2 (11-56)||(17993744-17993789)


Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18731606 - 18731380
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731606 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 18731507  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  18731506 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacaaaaagagtttccaaaataacaagaaaaacatgga 18731407  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
    ||||||||||||||||||||| |||||    
T  18731406 gcggttgcatcaatggaagttggctct 18731380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18699502 - 18699276
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  18699502 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgttttgcctgttttct 18699403  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18699402 atggcgtagatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 18699303  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
    |||||||||||||||||||||||||||    
T  18699302 gcggttgcatcaatggaagttagctct 18699276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18724187 - 18723961
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724187 ttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 18724088  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||    
T  18724087 atggcgtggatcctagtcacatacgacaccaaagtgggagttatggtgaacatctcactaagcacaaaatgagtttccaaaataacaagaaaaacatgga 18723988  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
    ||||||||||||||||||||| |||||    
T  18723987 gcggttgcatcaatggaagttggctct 18723961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18679669 - 18679443
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18679669 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtcttgttttgcctgttttct 18679570  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    ||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  18679569 atgtcgtggatcctactcacatatgacatcaaagtggtagttatggtgaacatctcactaatcactgaaagagtttccaaaataacaataaaaacatgga 18679470  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
    |||||||||||||||||||||||||||    
T  18679469 gcggttgcatcaatggaagttagctct 18679443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18655579 - 18655353
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  18655579 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgtttttcctgttttct 18655480  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18655479 atggcgtggatcctactcacatacgacatcaaactggaagttatggtgaacatctcactaagcacagaaagaatttccaaaataacaagaaaaacatgga 18655380  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
    ||||||||||||||||||||| |||||    
T  18655379 gcggttgcatcaatggaagttggctct 18655353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 18073842 - 18073948
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  18073842 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 18073941  T
Q  109 gatccta 115  Q
    || ||||    
T  18073942 gaaccta 18073948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 17989147 - 17989088
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaa 68  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  17989147 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaa 17989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 5091059 - 5090960
Alignment:
Q  11 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgga 110  Q
    ||||||| |||||||| |||||||| || ||||||||||| || || ||||||| ||||  ||| ||| | || ||||||||| |||||||||| |||||    
T  5091059 actatgcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtgga 5090960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 29273885 - 29273659
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| ||||    
T  29273885 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtctcattttgcctgtcttct 29273786  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||||||||||||    
T  29273785 atggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagtacgaagagagtttccaaaatagcaagaaaaacatgga 29273686  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
     |||||||||||||||||||| |||||    
T  29273685 tcggttgcatcaatggaagttggctct 29273659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 268459 - 268233
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||| || ||||    
T  268459 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaaaaagggtcgtctcattttgcccgtcttct 268360  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||    
T  268359 atggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaatagcaagaaaaacatgga 268260  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
    ||||||||||||||||||||| |||||    
T  268259 gcggttgcatcaatggaagttggctct 268233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 28164461 - 28164239
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||    
T  28164461 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttct-tg 28164363  T
Q  104 gcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcg 203  Q
    |||||||||||| | |  | |||||||| |  |||||||||||  || |||| |||||||| ||  |||| |||||||||||||||||||||||||||||    
T  28164362 gcgtggatcctactgatgtgcgacatcatacagggagttatggcaaagatcttactaagcatggtgagaggttccaaaataacaagaaaaacatggagcg 28164263  T
Q  204 gttgcatcaatggaagttagctct 227  Q
     ||||| ||||||||| |||||||    
T  28164262 attgcaccaatggaagatagctct 28164239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28127781 - 28127555
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  28127781 ttttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttct 28127682  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
     |||||||||||||| | |  | ||| |||| |  ||||||||||||||| | ||  ||||||| ||| |||| ||||||||||||||||||||||||||    
T  28127681 ttggcgtggatcctactgatgtgcgatatcatacagggagttatggtgaagagcttgctaagcatggagagaggttccaaaataacaagaaaaacatgga 28127582  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
    ||| ||||| ||||||||| |||||||    
T  28127581 gcgattgcaccaatggaagatagctct 28127555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26646551 - 26646777
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||    
T  26646551 ttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttct 26646650  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||    
T  26646651 atggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaagaaaaacaagga 26646750  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
     || ||||||||||||||||| |||||    
T  26646751 acgattgcatcaatggaagttggctct 26646777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26752519 - 26752745
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||    
T  26752519 ttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttct 26752618  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatgga 200  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||    
T  26752619 atggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaagaaaaacaagga 26752718  T
Q  201 gcggttgcatcaatggaagttagctct 227  Q
     || ||||||||||||||||| |||||    
T  26752719 acgattgcatcaatggaagttggctct 26752745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 25579799 - 25580018
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||||||||  |||    
T  25579799 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtg 25579898  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    || |||| ||||||||||||||| |||||||||||||||||  |||| |||||||| | | |||| || ||||||||| |||||||||||||||| ||||    
T  25579899 gaacctactcacatacgacatcagagtgggagttatggtgagtatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgc 25579998  T
Q  209 atcaatggaagttagctctt 228  Q
     |||||||||| ||||||||    
T  25579999 gtcaatggaagatagctctt 25580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 26656069 - 26656279
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||   |||||||||||||||||||| |||    
T  26656069 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtg 26656168  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    ||||||| ||||||||||||||| | ||| ||||| ||||| ||||| |||||||| | |||||  ||||||||||||||| |||||||| || |||||     
T  26656169 gatcctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttgg 26656268  T
Q  209 atcaatggaag 219  Q
    | |||||||||    
T  26656269 agcaatggaag 26656279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 26762040 - 26762250
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||   |||||||||||||||||||| |||    
T  26762040 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtg 26762139  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    ||||||| ||||||||||||||| | ||| ||||| ||||| ||||| |||||||| | |||||  ||||||||||||||| |||||||| || |||||     
T  26762140 gatcctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttgg 26762239  T
Q  209 atcaatggaag 219  Q
    | |||||||||    
T  26762240 agcaatggaag 26762250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 26056006 - 26056225
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |  | || ||||| ||||||||||  |||    
T  26056006 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtg 26056105  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    || |||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||   | || | |||||||||||| |||||||||||||||| ||||    
T  26056106 gaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgc 26056205  T
Q  209 atcaatggaagttagctctt 228  Q
     |||||||||| | ||||||    
T  26056206 gtcaatggaagatggctctt 26056225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 26075976 - 26076195
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |  | || ||||| ||||||||||  |||    
T  26075976 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtg 26076075  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    || |||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||   | || | |||||||||||| |||||||||||||||| ||||    
T  26076076 gaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgc 26076175  T
Q  209 atcaatggaagttagctctt 228  Q
     |||||||||| | ||||||    
T  26076176 gtcaatggaagatggctctt 26076195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 26142945 - 26143164
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || || || ||||||||||  |||    
T  26142945 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtg 26143044  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    || |||| |||||||||| |||| ||||||| ||||||||| ||||| |||||||| | | |||| || ||||||||| |||||||||||||||| ||||    
T  26143045 gaacctactcacatacgaaatcagagtgggatttatggtgagcatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgc 26143144  T
Q  209 atcaatggaagttagctctt 228  Q
     |||||||||| ||||||||    
T  26143145 gtcaatggaagatagctctt 26143164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 26823920 - 26824130
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||  |||||| || || |||||||||||||||||||| |||    
T  26823920 caactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctacaaggaaaaggggcgcctcgttttgcctgttttctatggtgtg 26824019  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    |||||| || |||||||||||||  |||||||||||| |  ||||||||||||||| | |||||| |||  |||||||||| |||||||||||   ||||    
T  26824020 gatcctggtgacatacgacatcagcgtgggagttatgctatacatctcactaagcatgaaaagaggttcggaaataacaaggaaaacatggagaaattgc 26824119  T
Q  209 atcaatggaag 219  Q
     ||||||||||    
T  26824120 ttcaatggaag 26824130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 27338171 - 27337953
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 109  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||   |||||||||||||||||||| | ||    
T  27338171 aactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcgg 27338072  T
Q  110 atcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgca 209  Q
    |||||| |||| |||||||||| | ||||||||||||||| ||||| |||||||| | | | |  ||||||||||||||| ||||||||||| ||||| |    
T  27338071 atcctactcacgtacgacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaa 27337972  T
Q  210 tcaatggaagttagctctt 228  Q
      |||||||| | ||||||    
T  27337971 gaaatggaagatggctctt 27337953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 27398911 - 27398693
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 109  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||   |||||||||||||||||||| | ||    
T  27398911 aactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcgg 27398812  T
Q  110 atcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgca 209  Q
    |||||| |||| |||||||||| | ||||||||||||||| ||||| |||||||| | | | |  ||||||||||||||| ||||||||||| ||||| |    
T  27398811 atcctactcacgtacgacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaa 27398712  T
Q  210 tcaatggaagttagctctt 228  Q
      |||||||| | ||||||    
T  27398711 gaaatggaagatggctctt 27398693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 25538620 - 25538839
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || |  | || ||||| ||||||||||  |||    
T  25538620 caactatgcatcttcttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtg 25538719  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    || |||| |||  |||||||||| ||||||||||||||||| ||| | |||||||| | | |||| || ||||||||  |||||||||||||||| ||||    
T  25538720 gaacctactcagttacgacatcagagtgggagttatggtgagcattttactaagcatgaagagaggtttcaaaataatgagaaaaacatggagcgattgc 25538819  T
Q  209 atcaatggaagttagctctt 228  Q
     |||||||||| ||||||||    
T  25538820 gtcaatggaagatagctctt 25538839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 26623056 - 26623193
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||||||||||    
T  26623056 caactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtg 26623155  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatgg 146  Q
    ||||||| ||||||||| ||||||| ||||||||||||    
T  26623156 gatcctactcacatacggcatcaaactgggagttatgg 26623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 26729034 - 26729171
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||||||||||    
T  26729034 caactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtg 26729133  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatgg 146  Q
    ||||||| ||||||||| ||||||| ||||||||||||    
T  26729134 gatcctactcacatacggcatcaaactgggagttatgg 26729171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27679018 - 27679132
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||||    
T  27679018 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttct 27679117  T
Q  101 atggcgtggatccta 115  Q
     ||| ||||| ||||    
T  27679118 ttggtgtggaaccta 27679132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 27718494 - 27718277
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  27718494 ttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27718395  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaagaaaaacatgg 199  Q
      |||||||| |||| | || | |||||||| |  || |||||||||||| ||| |  || |||| | |||||| || |||||| | ||||| |||||||    
T  27718394 tcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgataagaataacatgg 27718296  T
Q  200 agcggttgcatcaatggaa 218  Q
    || ||||||| | ||||||    
T  27718295 agaggttgcagcgatggaa 27718277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 25481822 - 25482041
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || || || ||||||||||| |||    
T  25481822 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtg 25481921  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 208  Q
    ||||||| | |  | |||| ||| |   | |||||||||||| |||| |||||||| | | || | |||||||||||| |||||||||||||||| ||||    
T  25481922 gatcctactgatgttcgacgtcatacatgtagttatggtgaatatctgactaagcatgaagaggggttccaaaataacgagaaaaacatggagcgattgc 25482021  T
Q  209 atcaatggaagttagctctt 228  Q
     |||||||||| | ||||||    
T  25482022 gtcaatggaagatggctctt 25482041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 26048925 - 26049080
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||| ||||  |||    
T  26048925 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtg 26049024  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagca 164  Q
    || |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||||||    
T  26049025 gaacctactcacatacgacatcatagtggaagttatggtgagcatcttactaagca 26049080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 26070094 - 26070249
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||| ||||  |||    
T  26070094 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtg 26070193  T
Q  109 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagca 164  Q
    || |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||||||    
T  26070194 gaacctactcacatacgacatcatagtggaagttatggtgagcatcttactaagca 26070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27677729 - 27677630
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||||    
T  27677729 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttct 27677630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 27611117 - 27611003
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  27611117 ttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27611018  T
Q  101 atggcgtggatccta 115  Q
      |||||||| ||||    
T  27611017 tcggcgtggaaccta 27611003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27593135 - 27593022
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||| | |||||||||||||||||    
T  27593135 ttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgccctgttttgcctgttttct 27593036  T
Q  101 atggcgtggatcct 114  Q
     ||| |||||||||    
T  27593035 ttggtgtggatcct 27593022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 27724960 - 27724811
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  27724960 ttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27724861  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa 150  Q
      |||||||| |||| | || | |||||||| |  || ||||||||||||    
T  27724860 tcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaa 27724811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27706517 - 27706420
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgtttt 98  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  27706517 ttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgtttt 27706420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 26937169 - 26937313
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||| ||||||||| |||| |||  |||||||| |||||||||    
T  26937169 tctatcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgcctattttctatg 26937268  T
Q  104 gcgtggatcctagtcacatacgacatcaaagtgggagttatggtg 148  Q
      |||||||||  |||| | ||||| |||| ||||||||||||||    
T  26937269 aagtggatccttctcacgttcgacaccaaactgggagttatggtg 26937313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 28139613 - 28139745
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||| ||||||||  || | ||||||||||||||||    
T  28139613 ttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgcttcaacacaaagggatgtttggttttgcctgttttct 28139712  T
Q  101 atggcgtggatcctagtcacatacgacatcaaa 133  Q
    |||| |||||||||  |||||| ||||||||||    
T  28139713 atggtgtggatccttctcacattcgacatcaaa 28139745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27698609 - 27698510
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| || ||||||||||||||||    
T  27698609 ttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttttgcctgttttct 27698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 26884235 - 26884351
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccaca--tcatgcactgctacaagacaaagggtcgtcttgttttgcctgtttt 98  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||| || ||||||||||||||    
T  26884235 ttttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgttttgcctgtttt 26884334  T
Q  99 ctatggcgtggatccta 115  Q
       ||| ||||||||||    
T  26884335 tgttggtgtggatccta 26884351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27604820 - 27604711
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||| || ||||||| ||||||||||||  | ||||||||||||||||    
T  27604820 ttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcgttttgcctgttttct 27604721  T
Q  101 atggcgtgga 110  Q
     ||| |||||    
T  27604720 ttggtgtgga 27604711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28781211 - 28781325
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||||||||||||||    
T  28781211 ttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttct 28781310  T
Q  101 atggcgtggatccta 115  Q
     ||| ||||||||||    
T  28781311 ttggtgtggatccta 28781325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 27531303 - 27531198
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 109  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||  || |||||| | ||||||||| |||||||||||||||||||   ||| ||||    
T  27531303 aactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacgatacaaagggttgtcttgttttgcctgtttttattggtgtgg 27531204  T
Q  110 atccta 115  Q
    ||||||    
T  27531203 atccta 27531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 228
Target Start/End: Original strand, 27214498 - 27214719
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 109  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  || |||| ||||  ||| ||||| |||||| | ||||||||||||||||| |    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttg 27214597  T
Q  110 atcctagtcacatacgacatc---aaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggtt 206  Q
    | |||  |||| | |||||||   | |     ||||||||||||   ||  ||||||| | | |||| || |||||||||||| ||||||||||||||||    
T  27214598 aaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggtt 27214697  T
Q  207 gcatcaatggaagttagctctt 228  Q
    |||  |||||||| ||||||||    
T  27214698 gcagaaatggaagatagctctt 27214719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 27234730 - 27234509
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 109  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  || |||| ||||  ||| ||||| |||||| | ||||||||||||||||| |    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttg 27234631  T
Q  110 atcctagtcacatacgacatc---aaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggtt 206  Q
    | |||  |||| | |||||||   | |     ||||||||||||   ||  ||||||| | | |||| || |||||||||||| ||||||||||||||||    
T  27234630 aaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggtt 27234531  T
Q  207 gcatcaatggaagttagctctt 228  Q
    |||  |||||||| ||||||||    
T  27234530 gcagaaatggaagatagctctt 27234509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 26802514 - 26802628
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||||||||||||   |||||| |||||||||||||| ||||| || || ||||| |||||||||||||| || || |||||| ||||||    
T  26802514 ttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgcctattttct 26802613  T
Q  101 atggcgtggatccta 115  Q
     ||| ||||||||||    
T  26802614 ttggtgtggatccta 26802628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 27427713 - 27427607
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  27427713 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 27427614  T
Q  109 gatccta 115  Q
    || ||||    
T  27427613 gaaccta 27427607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 31284368 - 31284473
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||||  || |||  ||| ||||| || |||||||| ||||||| |||||||    
T  31284368 caactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgttttgcccgttttctttggcgtg 31284467  T
Q  109 gatcct 114  Q
    ||||||    
T  31284468 gatcct 31284473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 28150012 - 28150111
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||| |||| |||||||| |  | ||| ||||| |||||||||    
T  28150012 tctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggttgcttagttctgcctattttctatg 28150111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 28242879 - 28242978
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||| || || || ||||||||  |||||||||    
T  28242879 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatg 28242978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 26949745 - 26949959
Alignment:
Q  13 tatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatc 112  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||| |||| || ||||  ||| ||||| |||||| |||| ||||||||||  || || |    
T  26949745 tatgcttcttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagttttctatgatgtagaac 26949844  T
Q  113 ctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatca 212  Q
    ||  |||| | |||||||| | |   ||||||||||||   ||  ||||||| | | |||| |||||||| | ||| |||||||||||||||||||   |    
T  26949845 cttctcacgtgcgacatcagaattatagttatggtgaagcacttgctaagcatgaagagaggttccaaaagagcaaaaaaaacatggagcggttgctgaa 26949944  T
Q  213 atggaagttagctct 227  Q
    ||||||| |||||||    
T  26949945 atggaagatagctct 26949959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 26861696 - 26861799
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |||||  ||||   ||||  |||||||||  | ||||||||||||||||||||| ||    
T  26861696 caactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactg---caaggaaaagggtcgcgtcgttttgcctgttttctatggcatg 26861792  T
Q  109 gatccta 115  Q
    |||||||    
T  26861793 gatccta 26861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 28181189 - 28181288
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||  || ||||| ||||||||  |||||||||    
T  28181189 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatg 28181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 28786350 - 28786576
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||| ||| | ||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||||||||||||||    
T  28786350 ttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttct 28786449  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaagaaaaacatgg 199  Q
     ||| || ||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||  ||| | |||||| || |||||| | ||| | |||||||    
T  28786450 ttggtgtcgatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctgggcatgaaaagaggtttcaaaatgataaggataacatgg 28786548  T
Q  200 agcggttgcatcaatggaagttagctct 227  Q
    || ||||||||||||||||||| |||||    
T  28786549 agaggttgcatcaatggaagttggctct 28786576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 28792471 - 28792697
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||| ||| | ||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||||||||||||||    
T  28792471 ttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttct 28792570  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaagaaaaacatgg 199  Q
     ||| || ||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||  ||| | |||||| || |||||| | ||| | |||||||    
T  28792571 ttggtgtcgatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctgggcatgaaaagaggtttcaaaatgataaggataacatgg 28792669  T
Q  200 agcggttgcatcaatggaagttagctct 227  Q
    || ||||||||||||||||||| |||||    
T  28792670 agaggttgcatcaatggaagttggctct 28792697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 26342043 - 26341975
Alignment:
Q  7 atcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaag 75  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||| |||| |||||    
T  26342043 atcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattgcttcaaggcaaag 26341975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 26848741 - 26848836
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggc 105  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| || |||| ||||  ||||||| |  | ||| | |||||||||||||||    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgctccaaggaaaagggtagcatggttattcctgttttctatggc 26848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 28185441 - 28185540
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||||||||||  |||||| ||||  ||  || ||||| ||||||||  |||||||||    
T  28185441 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattaactgcttcaaggaaagcgggcgtctagttttgccaattttctatg 28185540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 28227025 - 28227124
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||| ||||  |||  | || |||||||||||  |||||||||    
T  28227025 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatg 28227124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 2184369 - 2184415
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 56  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  2184369 aactatgcttcttcttcattttgtttggacgaacttgtccacatcat 2184415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 25071741 - 25071835
Alignment:
Q  11 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggc 105  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||| || ||||  |||| |||| |||||| | ||  |||||||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcactacttcaaggaaaagagtcgccttgttctaccaattttctatggc 25071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 26975134 - 26975179
Alignment:
Q  11 actatgcctcttcttcattttgtttggacgaacttgtccacatcat 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcat 26975179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 28297825 - 28297760
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaag 69  Q
    |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  28297825 tctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28297760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28514248 - 28514313
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaag 69  Q
    |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  28514248 tctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28514313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 28234639 - 28234691
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 56  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  28234639 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcat 28234691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 2184980 - 2185046
Alignment:
Q  11 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaaggg 77  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| |  |||| |||| |||||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg 2185046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 26617868 - 26617921
Alignment:
Q  175 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctt 228  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| ||||||||    
T  26617868 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctctt 26617921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 26723796 - 26723849
Alignment:
Q  175 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctt 228  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| ||||||||    
T  26723796 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctctt 26723849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 26811755 - 26811808
Alignment:
Q  175 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctt 228  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||| ||||||||    
T  26811755 ttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctctt 26811808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 25506961 - 25506873
Alignment:
Q  139 agttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct 227  Q
    |||||||||||| |||| |||||||| | | |||  || |||||||| ||||||||||||||| | | ||||||||||||  |||||||    
T  25506961 agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctct 25506873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 28325556 - 28325616
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgct 64  Q
    |||||||| ||||| |||||||| ||||| ||||| |||||||||||||| || |||||||    
T  28325556 tctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 27665223 - 27665177
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 56  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||    
T  27665223 aactatgctacttcttcattttgtttagatgaacttgtccacatcat 27665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 28098475 - 28098429
Alignment:
Q  10 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 56  Q
    |||||||| |||||||  ||||||||||| |||||||||||||||||    
T  28098475 aactatgcttcttctttgttttgtttggatgaacttgtccacatcat 28098429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 29826171 - 29826245
Alignment:
Q  73 aagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggt 147  Q
    ||||||||||| ||||||||| |||||||||  |||||||||  |||  | |||||||| | |||||||||||||    
T  29826171 aagggtcgtctcgttttgcctattttctatgatgtggatccttctcatgtgcgacatcagactgggagttatggt 29826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 25507023 - 25506978
Alignment:
Q  2 tttctatcaactatgcctcttcttcattttgtttggacgaacttgt 47  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||    
T  25507023 tttctatcaactatgcctcttcaaaattttgtttggaggaacttgt 25506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 28297654 - 28297610
Alignment:
Q  175 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaag 219  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||    
T  28297654 ttccaaaataacaagaataacatggagaggttgcagaaatggaag 28297610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 28514419 - 28514463
Alignment:
Q  175 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaag 219  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||    
T  28514419 ttccaaaataacaagaataacatggagaggttgcagaaatggaag 28514463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 4786 - 4560
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||  |||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  4786 ttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 4687  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaagaaaaacatgg 199  Q
      |||||||| |||| | || | |||||||  |  || |||||||||||| ||| |  || |||| | |||||| || |||||| | ||||| |||||||    
T  4686 tcggcgtggaacctactaacgtgcgacatctgaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgataagaataacatgg 4588  T
Q  200 agcggttgcatcaatggaagttagctct 227  Q
    || ||||||||||||||||||| |||||    
T  4587 agaggttgcatcaatggaagttggctct 4560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 13747 - 13521
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||| ||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||||||||||||||    
T  13747 ttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttct 13648  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaagaaaaacatgg 199  Q
     ||| |||||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||   || | |||||| || |||||| | ||||| |||||||    
T  13647 ttggtgtggatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgataagaataacatgg 13549  T
Q  200 agcggttgcatcaatggaagttagctct 227  Q
    |||| ||||||||||||||||| |||||    
T  13548 agcgattgcatcaatggaagttggctct 13521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 14470 - 14322
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  14470 ttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 14372  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa 150  Q
      |||||||| |||| | || | |||||||| |  || ||||||||||||    
T  14371 tcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaa 14322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 3537 - 3422
Alignment:
Q  1 ttttctatcaac-tatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttc 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||     
T  3537 ttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgtttta 3438  T
Q  100 tatggcgtggatccta 115  Q
    | ||| ||||| ||||    
T  3437 tttggtgtggaaccta 3422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 59650 - 59756
Alignment:
Q  9 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 108  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  59650 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 59749  T
Q  109 gatccta 115  Q
    || ||||    
T  59750 gaaccta 59756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7597 - 7823
Alignment:
Q  1 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttct 100  Q
    |||||||||||||| ||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||| | ||||| || ||||||||||||||||    
T  7597 ttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgttttgcctgttttct 7696  T
Q  101 atggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaagaaaaacatgg 199  Q
     ||| |||||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||   || | |||||| || |||||| | ||||| |||||||    
T  7697 ttggtgtggatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgataagaataacatgg 7795  T
Q  200 agcggttgcatcaatggaagttagctct 227  Q
    |||| ||||||||||||||||| |||||    
T  7796 agcgattgcatcaatggaagttggctct 7823  T

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Target: scaffold0038 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 43041 - 43140
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||| || || || ||||||||  |||||||||    
T  43041 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatg 43140  T

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Target: scaffold0038; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 34800 - 34899
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||  || ||||| ||||||||  |||||||||    
T  34800 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatg 34899  T

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Target: scaffold0038; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 27523 - 27622
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||| ||||  |||  | || |||||||||||  |||||||||    
T  27523 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatg 27622  T

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Target: scaffold0038; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 116871 - 116931
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgct 64  Q
    |||||||| ||||| |||||||| ||||| ||||| |||||||||||||| || |||||||    
T  116871 tctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

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Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 58394 - 58251
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 103  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||| | ||  | | || || || ||||||||  |||||||||    
T  58394 tctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgcttcgaggaatatgggcgcctagttttgccaattttctatg 58295  T
Q  104 gcgtggatcctagtcacatacgacatcaaagtgggagttatggt 147  Q
     |||||| |||  |||| | |||||||||  ||| |||||||||    
T  58294 acgtggaaccttctcacgtgcgacatcaagatggaagttatggt 58251  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3279763 - 3279815
Alignment:
Q  4 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 56  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  3279763 tctatcaactatgcttcttctatattttgtttggacgaacttgtccacatcat 3279815  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 17993789 - 17993744
Alignment:
Q  11 actatgcctcttcttcattttgtttggacgaacttgtccacatcat 56  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17993789 actatgcttcttcttcattttgtttagacgaacttgtccacatcat 17993744  T

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