View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6131_high_147 (Length: 236)

Name: NF6131_high_147
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6131_high_147
NF6131_high_147
[»] chr3 (12 HSPs)
chr3 (1-226)||(2942965-2943192)
chr3 (1-214)||(1654698-1654910)
chr3 (1-214)||(13846114-13846326)
chr3 (16-214)||(2550303-2550500)
chr3 (5-214)||(1627711-1627921)
chr3 (16-214)||(7407520-7407717)
chr3 (16-203)||(28745112-28745300)
chr3 (78-201)||(9633221-9633343)
chr3 (80-201)||(2180128-2180249)
chr3 (27-69)||(35083131-35083173)
chr3 (152-196)||(16457159-16457203)
chr3 (27-59)||(27259372-27259404)
[»] chr8 (18 HSPs)
chr8 (1-226)||(19369662-19369888)
chr8 (1-226)||(19448570-19448796)
chr8 (1-226)||(19532280-19532506)
chr8 (1-212)||(5528865-5529076)
chr8 (5-226)||(25637769-25637991)
chr8 (27-226)||(18767066-18767266)
chr8 (16-214)||(28248846-28249042)
chr8 (1-214)||(45355878-45356090)
chr8 (37-214)||(25638966-25639141)
chr8 (90-201)||(29345642-29345753)
chr8 (78-199)||(12105559-12105680)
chr8 (144-226)||(27810162-27810245)
chr8 (1-136)||(17634314-17634449)
chr8 (31-136)||(14997775-14997879)
chr8 (27-130)||(6801673-6801775)
chr8 (155-199)||(5650725-5650769)
chr8 (16-67)||(6223539-6223592)
chr8 (27-59)||(5650863-5650895)
[»] chr4 (9 HSPs)
chr4 (1-226)||(1684704-1684930)
chr4 (1-214)||(43600389-43600601)
chr4 (1-135)||(1152166-1152300)
chr4 (16-214)||(47065801-47065997)
chr4 (33-215)||(53300509-53300687)
chr4 (31-200)||(27739554-27739720)
chr4 (80-136)||(37750837-37750893)
chr4 (98-175)||(39074074-39074151)
chr4 (27-59)||(37750910-37750942)
[»] chr7 (11 HSPs)
chr7 (1-226)||(9242236-9242462)
chr7 (1-214)||(4685169-4685381)
chr7 (78-201)||(20277135-20277259)
chr7 (77-191)||(19746820-19746933)
chr7 (153-214)||(10022387-10022448)
chr7 (144-196)||(2931840-2931892)
chr7 (37-126)||(3374557-3374646)
chr7 (28-69)||(8241748-8241789)
chr7 (149-201)||(3374648-3374700)
chr7 (1-43)||(10022246-10022288)
chr7 (82-134)||(10022314-10022365)
[»] chr5 (11 HSPs)
chr5 (11-226)||(23616566-23616782)
chr5 (11-226)||(23847963-23848179)
chr5 (1-214)||(17037665-17037876)
chr5 (1-214)||(5078830-5079042)
chr5 (80-214)||(7411534-7411669)
chr5 (78-136)||(38449822-38449880)
chr5 (94-136)||(42076256-42076298)
chr5 (37-69)||(7410983-7411015)
chr5 (39-67)||(10869817-10869845)
chr5 (27-59)||(19985145-19985177)
chr5 (80-136)||(31571236-31571292)
[»] chr2 (10 HSPs)
chr2 (1-214)||(15513789-15514000)
chr2 (16-214)||(30267140-30267336)
chr2 (27-134)||(44921106-44921212)
chr2 (1-135)||(31342560-31342694)
chr2 (145-193)||(44921412-44921460)
chr2 (167-214)||(31342498-31342545)
chr2 (27-136)||(7702579-7702687)
chr2 (27-136)||(27151080-27151189)
chr2 (84-198)||(26734941-26735057)
chr2 (167-201)||(22967005-22967039)
[»] chr6 (11 HSPs)
chr6 (1-226)||(12591955-12592181)
chr6 (1-226)||(6684222-6684448)
chr6 (5-226)||(14669095-14669320)
chr6 (1-226)||(17719474-17719701)
chr6 (1-214)||(15361837-15362049)
chr6 (1-214)||(16734927-16735139)
chr6 (1-126)||(11936620-11936745)
chr6 (1-126)||(11948600-11948725)
chr6 (5-69)||(10070780-10070845)
chr6 (144-196)||(10264025-10264077)
chr6 (90-136)||(30481101-30481147)
[»] scaffold0684 (1 HSPs)
scaffold0684 (1-227)||(498-725)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-226)||(40450-40676)
[»] chr1 (7 HSPs)
chr1 (1-212)||(51758875-51759083)
chr1 (27-193)||(897604-897769)
chr1 (27-127)||(18308298-18308397)
chr1 (78-136)||(28637576-28637634)
chr1 (16-65)||(28637040-28637091)
chr1 (16-59)||(39368557-39368602)
chr1 (84-136)||(17113133-17113185)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-214)||(6821-7033)
[»] scaffold0105 (1 HSPs)
scaffold0105 (160-214)||(386-438)


Alignment Details
Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2943192 - 2942965
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnn--gtgttacatttacaatttttga 98  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||| ||||||||    
T  2943192 tatctgtaacaattaaaaagtgtcgcaatgttacactattgtaacactttttgtatcactggtaacaataaaaaaaaagtgttacatttactatttttga 2943093  T
Q  99 gaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaata 198  Q
     ||| |||||||||||| ||||||||||||||||||||       ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  2943092 taagttgtaaaaagtgtcgcaaaattgtctagactaaatttttttgaatctaccaaatttgtctttgcttagacttcattcatatttgaattaaccaata 2942993  T
Q  199 ttaaatacaagttttataacaaggttga 226  Q
    ||||||||||||||||||| ||| ||||    
T  2942992 ttaaatacaagttttataataagtttga 2942965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1654698 - 1654910
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  ||||||||||||| || |||  |||||||||| ||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  1654698 tatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacattttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 1654796  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1654797 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt-aatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 1654895  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  1654896 tagatacaagtttta 1654910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 13846114 - 13846326
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  ||||||||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  13846114 tatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 13846212  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| ||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  13846213 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt-aatttactaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 13846311  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  13846312 tagatacaagtttta 13846326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 2550303 - 2550500
Alignment:
Q  16 aaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtg 114  Q
    ||||||||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| |||||||||| || |||||||||||    
T  2550303 aaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgaggagttgtaaaaagtg 2550401  T
Q  115 ttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    | ||||||||||||| |||||         ||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2550402 tcgcaaaattgtctaaactaatttttttt-aatttactaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagtttta 2550500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 1627921 - 1627711
Alignment:
Q  5 tgtatcaattcaaaagtgtcgcaa-tgttacactatt-gtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaag 102  Q
    |||| ||||| ||||||||||||| ||||||| |||| |||| ||||||| ||||||||||||||||       |||||||||||| ||||||| |||||    
T  1627921 tgtaacaattaaaaagtgtcgcaaatgttacattatttgtaatactttttatatcactagtaacaataaaaaa-gtgttacatttataattttttagaag 1627823  T
Q  103 atgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaa 202  Q
     |||||||||||| |||||||| |||| ||||||        |||||| ||| ||| |||||  |||||||||||||||||||||||||| |||||||||    
T  1627822 ttgtaaaaagtgtcgcaaaattatctaaactaaatttttttaaatctaacaagtttatctttacttagacttcattcatatttgaattaatcaatattaa 1627723  T
Q  203 atacaagtttta 214  Q
    |||||| |||||    
T  1627722 atacaaatttta 1627711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 7407717 - 7407520
Alignment:
Q  16 aaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtg 114  Q
    ||||||||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||| || || |||||||||||    
T  7407717 aaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttaaggagttgtaaaaagtg 7407619  T
Q  115 ttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    | |||||||||| || |||||         ||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7407618 tcgcaaaattgtataaactaatttttttt-aatttacaaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagtttta 7407520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 28745112 - 28745300
Alignment:
Q  16 aaaagtgtcgcaa--tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagt 113  Q
    |||||||||||||  | ||||| ||||||||||||||||||||||  |||||||||        |||||||||||  |||||||||||  ||||||||||    
T  28745112 aaaagtgtcgcaaaattttacattattgtaacactttttgtatcatcagtaacaataaaaaa--tgttacatttatcatttttgagaatttgtaaaaagt 28745209  T
Q  114 gttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttca-ttcatatttgaattaaccaatattaaa 203  Q
    ||||||||||||||||   ||||       ||||| | |||||||||||||  || || |||| ||||||||| |||||||||||||||||    
T  28745210 gttgcaaaattgtctaacataaaaagttgtgaatcaaccaaatttgtctttcttttgatttcatttcatatttaaattaaccaatattaaa 28745300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 201
Target Start/End: Complemental strand, 9633343 - 9633221
Alignment:
Q  78 tgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcat 177  Q
    |||| ||||||  |||||||||||| || |||| |||| ||||||||||||||| ||||       ||||||| |||||   |||||  |||||||||||    
T  9633343 tgttgcatttatcatttttgagaagttggaaaa-gtgtcgcaaaattgtctagaataaaaaattgtgaatctaccaaataattctttctttagacttcat 9633245  T
Q  178 tcatatttgaattaaccaatatta 201  Q
    ||||||||||||| ||||||||||    
T  9633244 tcatatttgaattcaccaatatta 9633221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 201
Target Start/End: Original strand, 2180128 - 2180249
Alignment:
Q  80 ttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattc 179  Q
    ||||||||| |||||||  |||| ||||||||||||   ||||||| ||||| ||||       |||| || ||||||| | |||| ||||| ||| |||    
T  2180128 ttacatttataattttttggaagttgtaaaaagtgtcagaaaattgcctagattaaaaaattgtgaatttaccaaatttatgtttgcttagagttcgttc 2180227  T
Q  180 atatttgaattaaccaatatta 201  Q
    ||||||||||||||||||||||    
T  2180228 atatttgaattaaccaatatta 2180249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 35083131 - 35083173
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaat 69  Q
    ||||||| | ||||||||||||||||| |||||||||||||||    
T  35083131 aatgttatattattgtaacactttttgcatcactagtaacaat 35083173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 16457203 - 16457159
Alignment:
Q  152 caaatttgtctttgattagacttcattcatatttgaattaaccaa 196  Q
    |||||||||||||| ||  ||||||||||||||| ||||||||||    
T  16457203 caaatttgtctttgctttcacttcattcatatttaaattaaccaa 16457159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 27259404 - 27259372
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcac 59  Q
    ||||||||| |||||||||||||||||||||||    
T  27259404 aatgttacattattgtaacactttttgtatcac 27259372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 19369888 - 19369662
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  19369888 tatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaa-gtgttacatttataatttttgag 19369790  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||||||||||||||||||       ||||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  19369789 aagttgtaaaaagtgtcgcaaaattgtctagactaaatttttttgaatctaccaaatttgtctttgcttaaacttcattcatatttgaattaactaatat 19369690  T
Q  200 taaatacaagtttt-ataacaaggttga 226  Q
    || ||||||||||| |||||||| ||||    
T  19369689 tagatacaagttttaataacaagtttga 19369662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19448570 - 19448796
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  19448570 tatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaa-gtgttacatttataatttttgag 19448668  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||||||||||||||||||       ||||||| ||||||||||||   ||| |||||||||||||||||||||||||||||    
T  19448669 aagttgtaaaaagtgtcgcaaaattgtctagactaaatttttttgaatctaccaaatttgtcttcacttaaacttcattcatatttgaattaaccaatat 19448768  T
Q  200 taaatacaagtttt-ataacaaggttga 226  Q
    || ||||||||||| |||||||| ||||    
T  19448769 tagatacaagttttaataacaagtttga 19448796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 19532506 - 19532280
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  19532506 tatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaa-gtgttacatttataatttttgag 19532408  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||||||||||||||||||       ||||||| ||||||||||||   ||| |||||||||||||||||||||||||||||    
T  19532407 aagttgtaaaaagtgtcgcaaaattgtctagactaaatttttttgaatctaccaaatttgtcttcacttaaacttcattcatatttgaattaaccaatat 19532308  T
Q  200 taaatacaagtttt-ataacaaggttga 226  Q
    || ||||||||||| |||||||| ||||    
T  19532307 tagatacaagttttaataacaagtttga 19532280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 5528865 - 5529076
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| || || ||||||||||||| | | ||| |||||||||||||||||||||| ||||||||||       |||||||| ||| ||||||||||    
T  5528865 tatctgtaacagttaaaaagtgtcgcaaatataacattattgtaacactttttgtatcattagtaacaataaaaaa-gtgttacaattataatttttgag 5528963  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5528964 aagttgtaaaaagtgtcgcaaaattgtctagactaaatttttttgaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 5529063  T
Q  200 taaatacaagttt 212  Q
    || ||||||||||    
T  5529064 tagatacaagttt 5529076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 25637769 - 25637991
Alignment:
Q  5 tgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaaga 103  Q
    |||| ||||| |||||||| |||| || |||| |||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||     
T  25637769 tgtaacaattaaaaagtgttgcaaatgctacattattgtaacactttttgtatcactagtaacaatactaaa-gtgttacatttataatttttgagaagt 25637867  T
Q  104 tgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaa 203  Q
    |||||||||||| ||||||||||||||||||||       |||||||  ||||||||||||   |||||||||||||||||||||||||||||||||| |    
T  25637868 tgtaaaaagtgtcgcaaaattgtctagactaaaattttttgaatctacaaaatttgtctttacatagacttcattcatatttgaattaaccaatattaga 25637967  T
Q  204 tacaagtttt-ataacaaggttga 226  Q
    |||||||||| |||||||| ||||    
T  25637968 tacaagttttaataacaagtttga 25637991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 18767066 - 18767266
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgt 126  Q
    ||||||||| |||||||||| ||||||||||||||||||||||       |||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  18767066 aatgttacattattgtaacattttttgtatcactagtaacaataaaaaaagtgttacatttataatttttgagaagttgtaaaaagtattgcaaaattgt 18767165  T
Q  127 ctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttt-ataacaaggttg 225  Q
    |||||| ||         |||||| |||||||||||| | ||| |||||||||||||||||||||||  |||||||||||||||||| |||||||| |||    
T  18767166 ctagacaaattttttttcaatctaccaaatttgtcttcgcttaaacttcattcatatttgaattaacttatattaaatacaagttttaataacaagtttg 18767265  T
Q  226 a 226  Q
    |    
T  18767266 a 18767266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 28249042 - 28248846
Alignment:
Q  16 aaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtg 114  Q
    ||||||||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| |||||||||| || |||||||||||    
T  28249042 aaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgaggagttgtaaaaagtg 28248944  T
Q  115 ttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    | ||||||||||||| |||||         ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28248943 tcgcaaaattgtctaaactaattttttt--aatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagatacaagtttta 28248846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 45356090 - 45355878
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  ||||||||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  45356090 tatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 45355992  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| |||||||||| || |||||         ||| ||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  45355991 gagttgtaaaaagtgtcgcaaaattgtataaactaatttttttt-aatttactaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 45355893  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  45355892 tagatacaagtttta 45355878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 214
Target Start/End: Original strand, 25638966 - 25639141
Alignment:
Q  37 tattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    |||||||||||||||||||||||| ||||||||       |||||||||||| |||||||||| || |||||||||||| ||||||||||||| |||||     
T  25638966 tattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgaggagttgtaaaaagtgtcgcaaaattgtctaaactaat 25639064  T
Q  137 nnnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
            ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||    
T  25639065 ttttttt-aatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatattagacacaagtttta 25639141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 29345642 - 29345753
Alignment:
Q  90 aatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaat 189  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||       |||||||  |||||||||| || |||||||||| ||||||||||||    
T  29345642 aatttttgagaagttgtaaaaagtgtcgcaaaattgtctaaactaaaaaattgtgaatctactaaatttgtctctgcttagacttcaatcatatttgaat 29345741  T
Q  190 taaccaatatta 201  Q
    ||||||||||||    
T  29345742 taaccaatatta 29345753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 12105559 - 12105680
Alignment:
Q  78 tgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcat 177  Q
    ||||||||| |  |||||| ||||| |||||||||||| ||||||||||||| || |||       ||||||| ||||||||| |||| ||||| |||||    
T  12105559 tgttacattcatcattttttagaagttgtaaaaagtgtcgcaaaattgtctaaaccaaaaaattgtgaatctaccaaatttgtttttgcttagatttcat 12105658  T
Q  178 tcatatttgaattaaccaatat 199  Q
    ||||||||||||||||||||||    
T  12105659 tcatatttgaattaaccaatat 12105680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 27810162 - 27810245
Alignment:
Q  144 gaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttt-ataacaaggttga 226  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||    
T  27810162 gaatctacaaaatttgtctttgtttagacttcattcatatttgaattaaccaattttagatacaagttttaataacaagtttga 27810245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 17634449 - 17634314
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  ||||||||||||| | ||||| |||||||||||||| |||||||| | |||||||        |||| ||||||  |||||||||    
T  17634449 tatctgtaacaatcaaaaagtgtcgcaaatattacattattgtaacactttatgtatcaccaataacaataaataaa-tgttgcatttatcatttttgag 17634351  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    ||| ||||||||||||||||||||| |||||||||||    
T  17634350 aagttgtaaaaagtgttgcaaaattatctagactaaa 17634314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 14997775 - 14997879
Alignment:
Q  31 ttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctag 130  Q
    ||||| |||||||||||||||||||||||  |||||| |        ||||||||||| ||||||||| ||| |||||||||| ||||||||||||| ||    
T  14997775 ttacattattgtaacactttttgtatcaccggtaacactaaaaaaa-tgttacatttataatttttgataagttgtaaaaagttttgcaaaattgtccag 14997873  T
Q  131 actaaa 136  Q
    | ||||    
T  14997874 attaaa 14997879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 6801775 - 6801673
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgt 126  Q
    ||||||||| ||||||||||||||||||||||  |||||| ||        |||||||||||  ||||||| |||   ||||||||||||||||||||||    
T  6801775 aatgttacattattgtaacactttttgtatcatcagtaaccataaagaaa-tgttacatttatcatttttgcgaattagtaaaaagtgttgcaaaattgt 6801677  T
Q  127 ctag 130  Q
    ||||    
T  6801676 ctag 6801673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 5650769 - 5650725
Alignment:
Q  155 atttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||    
T  5650769 atttgtcattgcttagatttcattcatatttgaattaaccaatat 5650725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 6223539 - 6223592
Alignment:
Q  16 aaaagtgtcgcaa--tgttacactattgtaacactttttgtatcactagtaaca 67  Q
    |||||||||||||  ||||||| ||||||||||||||||| ||||| |||||||    
T  6223539 aaaagtgtcgcaaaatgttacattattgtaacactttttgaatcaccagtaaca 6223592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 5650895 - 5650863
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcac 59  Q
    ||||||||| |||||||||||||||||||||||    
T  5650895 aatgttacattattgtaacactttttgtatcac 5650863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 1684930 - 1684704
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  1684930 tatctgtaacaattaaaaagtgtcgcaaatgttacaatattgtaacactttttgtatcactagtaacaataaaaaa-gtgttacatttataatttttgag 1684832  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||||||||||||||||||       ||||||| |||||||||||| | ||| |||||||||| ||||||||||||||||||    
T  1684831 aagttgtaaaaagtgtcgcaaaattgtctagactaaatttttttgaatctaccaaatttgtcttcgcttaaacttcattcagatttgaattaaccaatat 1684732  T
Q  200 taaatacaagtttt-ataacaaggttga 226  Q
     | ||||||||||| |||||||| ||||    
T  1684731 cagatacaagttttaataacaagtttga 1684704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 43600389 - 43600601
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  ||||||||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  43600389 tatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 43600487  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| ||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  43600488 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt-aatttactaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 43600586  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  43600587 tagatacaagtttta 43600601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1152166 - 1152300
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  1152166 tatctgtaacaattaaaaagtgtctcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaa-gtgttacatttataatttttgag 1152264  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaa 135  Q
    ||| |||||||||||| |||||||||||||||||||    
T  1152265 aagttgtaaaaagtgtcgcaaaattgtctagactaa 1152300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 47065997 - 47065801
Alignment:
Q  16 aaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtg 114  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||       |||||||||||| || |||| ||||| |||||||||||    
T  47065997 aaaagtgtcgcaaatgttacactattgtaacactttttgtataactagtaacaat-aaaaaagtgttacatttataaattttaagaagttgtaaaaagtg 47065899  T
Q  115 ttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    | |||||||||| ||||||| |        ||||||  ||| || |||||| |||||||||||||||||||||||||||  |||||| | ||||||||||    
T  47065898 tggcaaaattgtttagactataatttttttaatctacaaaaattttctttgcttagacttcattcatatttgaattaac--atattagagacaagtttta 47065801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 215
Target Start/End: Original strand, 53300509 - 53300687
Alignment:
Q  33 acactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagac 132  Q
    |||||||||||||||||||||||| ||||||||||||       |||||||||||| || |||| ||||| |||||||||||| |||||||||| |||||    
T  53300509 acactattgtaacactttttgtataactagtaacaataaaaaa-gtgttacatttataaattttaagaagttgtaaaaagtgtggcaaaattgtttagac 53300607  T
Q  133 taaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagttttat 215  Q
    || |        |||||| ||||||| |||||| ||| |||||||||||||||||||||||  |||||| | |||||||||||    
T  53300608 tataatttttttaatcta-caaatttttctttgcttatacttcattcatatttgaattaac--atattagagacaagttttat 53300687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 200
Target Start/End: Complemental strand, 27739720 - 27739554
Alignment:
Q  31 ttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctag 130  Q
    ||||| |||||||||| ||||||||||| || |||||||        ||||||||||| |||||||||| || ||||||||||||  ||||||| |||||    
T  27739720 ttacattattgtaacattttttgtatcaatactaacaataaaaaaa-tgttacatttataatttttgaggagttgtaaaaagtgtcacaaaattatctag 27739622  T
Q  131 actaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatatt 200  Q
    ||||||       ||||||| | |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  27739621 actaaaattgt--gaatctaccgaatttgtctttgcttagacttcagtcataattgaattaaccaatatt 27739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 37750893 - 37750837
Alignment:
Q  80 ttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    ||||||||| ||||||||||||| |||||||||| | |||||||||| |||||||||    
T  37750893 ttacatttataatttttgagaagttgtaaaaagtatcgcaaaattgtatagactaaa 37750837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 39074151 - 39074074
Alignment:
Q  98 agaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttc 175  Q
    ||||| |||||||| ||||||||||||||||||||||||       |||||||  ||||||||||||| |||||||||    
T  39074151 agaagttgtaaaaaatgttgcaaaattgtctagactaaataattgtgaatctactaaatttgtctttgcttagacttc 39074074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 37750942 - 37750910
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcac 59  Q
    ||||||||| |||||||||||||||||||||||    
T  37750942 aatgttacattattgtaacactttttgtatcac 37750910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9242462 - 9242236
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    ||||| || ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||       |||||||||||| ||||||||||    
T  9242462 tatctataacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactattaacaatgaaaaa-gtgttacatttataatttttgag 9242364  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||||||||||||| ||||       ||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||    
T  9242363 aagttgtaaaaagtgtcgcaaaattgtctagattaaatttttttgaatctaccaaatttgtcttcgcttaaacttcattcatatttgaattaaccaatat 9242264  T
Q  200 taaatacaagtttt-ataacaaggttga 226  Q
    || ||||||||||| |||||||| ||||    
T  9242263 tagatacaagttttaataacaagtttga 9242236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4685381 - 4685169
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  ||||||||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  4685381 tatctgtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 4685283  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  4685282 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt-aatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 4685184  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  4685183 tagatacaagtttta 4685169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 201
Target Start/End: Complemental strand, 20277259 - 20277135
Alignment:
Q  78 tgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnn-gaatctatcaaatttgtctttgattagacttca 176  Q
    ||||||||||| ||||||||||||| |||||||||||| | ||||||||||| ||||||        ||||| |  ||||||||||||| ||||||||||    
T  20277259 tgttacatttataatttttgagaagttgtaaaaagtgtcgtaaaattgtctaaactaaaaaaaatatgaatcaactaaatttgtctttgtttagacttca 20277160  T
Q  177 ttcatatttgaattaaccaatatta 201  Q
     ||||||||||||||||||||||||    
T  20277159 gtcatatttgaattaaccaatatta 20277135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 19746820 - 19746933
Alignment:
Q  77 gtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttca 176  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||       |||| |||||||||||||||||  ||||||| |    
T  19746820 gtgttacatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtctaaac-aaatttttttgaatttatcaaatttgtctttgcgtagacttta 19746918  T
Q  177 ttcatatttgaatta 191  Q
    |||||||||||||||    
T  19746919 ttcatatttgaatta 19746933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 10022387 - 10022448
Alignment:
Q  153 aaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    ||||||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||||    
T  10022387 aaatttgtctttgcttagacttcattcatattataattaatcaatattacatacaagtttta 10022448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 2931892 - 2931840
Alignment:
Q  144 gaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaa 196  Q
    |||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  2931892 gaatctatcaaatttgcctttgattagacttcattcatatttcaactaaccaa 2931840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 3374557 - 3374646
Alignment:
Q  37 tattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaa-aagtgttgcaaaattgt 126  Q
    ||||||||||||||||||||||| |||||||||       |||||||||||| ||||||| ||||| |||||| |||||||||||||||||    
T  3374557 tattgtaacactttttgtatcaccagtaacaataaaaaa-gtgttacatttataattttttagaagttgtaaagaagtgttgcaaaattgt 3374646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 8241748 - 8241789
Alignment:
Q  28 atgttacactattgtaacactttttgtatcactagtaacaat 69  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  8241748 atgttagattattgtaacactttttgtatcactagtaacaat 8241789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 3374648 - 3374700
Alignment:
Q  149 tatcaaatttgtctttgattagacttcattcatatttgaattaaccaatatta 201  Q
    |||||||||||| |||  ||| ||||||||||| |||||||||||||||||||    
T  3374648 tatcaaatttgtatttacttaaacttcattcatgtttgaattaaccaatatta 3374700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10022246 - 10022288
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaatgttacactattgta 43  Q
    |||||||| ||||| |||||||||||||||||||| |||||||    
T  10022246 tatctgtaacaattaaaaagtgtcgcaatgttacattattgta 10022288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 10022314 - 10022365
Alignment:
Q  82 acatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagacta 134  Q
    ||||||| ||||||||||||| ||| |||||||| |||||||||| |||||||    
T  10022314 acatttataatttttgagaag-tgtcaaaagtgtcgcaaaattgtttagacta 10022365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 23616782 - 23616566
Alignment:
Q  11 aattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaa 109  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||| ||||||    
T  23616782 aattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaa-gtgttacatttataatttttgagaagttgtaaa 23616684  T
Q  110 aagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaag 209  Q
    |||||| |||||||||||||| |||||       ||||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||| |||||||    
T  23616683 aagtgtcgcaaaattgtctaggctaaatttttttgaatctaccaaatttgtcttcacttaaacttcattcatatttgaattaaccaatattagatacaag 23616584  T
Q  210 tttt-ataacaaggttga 226  Q
    |||| |||||||| ||||    
T  23616583 ttttaataacaagtttga 23616566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 23848179 - 23847963
Alignment:
Q  11 aattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaa 109  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||| ||||||    
T  23848179 aattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaataaaaaa-gtgttacatttataatttttgagaagttgtaaa 23848081  T
Q  110 aagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaag 209  Q
    |||||| |||||||||||||| |||||       ||||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||| |||||||    
T  23848080 aagtgtcgcaaaattgtctaggctaaatttttttgaatctaccaaatttgtcttcacttaaacttcattcatatttgaattaaccaatattagatacaag 23847981  T
Q  210 tttt-ataacaaggttga 226  Q
    |||| |||||||| ||||    
T  23847980 ttttaataacaagtttga 23847963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 17037665 - 17037876
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||| ||    
T  17037665 tatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaat--aaaaagtgttacatttataatttttaag 17037762  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| ||  |||||||| |||||||||| ||||||| |        |||||| |||||||||||||  ||| |||| ||||||||||||||||||||||||    
T  17037763 aagttgacaaaagtgtcgcaaaattgtatagactagattttttttaatctaccaaatttgtctttacttaaactt-attcatatttgaattaaccaatat 17037861  T
Q  200 taaatacaagtttta 214  Q
    |  ||||||||||||    
T  17037862 ttgatacaagtttta 17037876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5079042 - 5078830
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  |||||||| |||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| |||||| |||    
T  5079042 tatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttt-gag 5078945  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| || |||||||||||||| ||| | |||||||||||||||||||||||||||    
T  5078944 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttttaatttaccaaatttgtctttgcttaaatttcattcatatttgaattaaccaatat 5078845  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  5078844 tagatacaagtttta 5078830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 214
Target Start/End: Original strand, 7411534 - 7411669
Alignment:
Q  80 ttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnng-aatctatcaaatttgtctttgattagacttcatt 178  Q
    ||||||||| |||||||||| || |||||||||||||| ||||||||||| ||||           ||| ||||||||||||||||| ||||||||||||    
T  7411534 ttacatttataatttttgaggagttgtaaaaagtgttgtaaaattgtctaaactatttttttttttaatttatcaaatttgtctttgcttagacttcatt 7411633  T
Q  179 catatttgaattaaccaatattaaatacaagtttta 214  Q
    ||||||||||||||||||||||||||||||||||||    
T  7411634 catatttgaattaaccaatattaaatacaagtttta 7411669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 38449880 - 38449822
Alignment:
Q  78 tgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    |||| |||||| ||||||||||||| |||||||||||| ||||||||||| || |||||    
T  38449880 tgtttcatttataatttttgagaagttgtaaaaagtgtcgcaaaattgtccaggctaaa 38449822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 42076256 - 42076298
Alignment:
Q  94 tttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||    
T  42076256 tttgagaagttgtaaaaagtgtcgcaaagttgtctagactaaa 42076298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 7410983 - 7411015
Alignment:
Q  37 tattgtaacactttttgtatcactagtaacaat 69  Q
    |||||||||||||||||||||||| ||||||||    
T  7410983 tattgtaacactttttgtatcacttgtaacaat 7411015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 10869817 - 10869845
Alignment:
Q  39 ttgtaacactttttgtatcactagtaaca 67  Q
    |||||||||||||||||||||||||||||    
T  10869817 ttgtaacactttttgtatcactagtaaca 10869845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 19985145 - 19985177
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcac 59  Q
    ||||||||| |||||||||||||||||||||||    
T  19985145 aatgttacattattgtaacactttttgtatcac 19985177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 31571236 - 31571292
Alignment:
Q  80 ttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    |||| |||| ||||||| ||||| |||||||||||| ||||||||||| || |||||    
T  31571236 ttacttttataatttttaagaagttgtaaaaagtgtcgcaaaattgtccaggctaaa 31571292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 15513789 - 15514000
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgaga 100  Q
    |||||||||||||  |||||||||||||||||||| ||||  |||||||||||||||||||||||||||       ||||||| |||| |||||||||||    
T  15513789 tatctgtatcaatcaaaaagtgtcgcaatgttacattattagaacactttttgtatcactagtaacaattaaaaa-gtgttacgtttataatttttgaga 15513887  T
Q  101 agatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatatt 200  Q
    || |||||||||||| ||||| | ||||  ||||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15513888 agttgtaaaaagtgtcgcaaact-gtctcaactaaaaaattttgaatctatcaaatttgtctttgcttagacttcattcatatttgaattaaccaatatt 15513986  T
Q  201 aaatacaagtttta 214  Q
    | ||||||||||||    
T  15513987 agatacaagtttta 15514000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 30267140 - 30267336
Alignment:
Q  16 aaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtg 114  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||       |||||||||||| || |||| ||||| |||||||||||    
T  30267140 aaaagtgtcgcaaatgttacactattgtaacactttttgtataactagtaacaat-aaaaaagtgttacatttataaattttaagaagttgtaaaaagtg 30267238  T
Q  115 ttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    | |||||||||| ||||||| |        ||||||  ||| || |||||| |||||||||||||||||||||||||||  |||||| | ||||||||||    
T  30267239 tggcaaaattgtttagactataatttttttaatctacaaaaattttctttgcttagacttcattcatatttgaattaac--atattagagacaagtttta 30267336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 44921106 - 44921212
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  44921106 aatgttacactattgtaacactttttgtatcactagtaacaat-aaaaaagtgttacatttataatttttgagaagttgtaaaaattgtcgcaaaattgt 44921204  T
Q  127 ctagacta 134  Q
    ||||||||    
T  44921205 ctagacta 44921212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31342694 - 31342560
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  |||||||| |||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  31342694 tatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 31342596  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaa 135  Q
     || |||||||| ||| ||||||||||||| |||||    
T  31342595 gagttgtaaaaaatgtcgcaaaattgtctaaactaa 31342560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 44921412 - 44921460
Alignment:
Q  145 aatctatcaaatttgtctttgattagacttcattcatatttgaattaac 193  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44921412 aatctatcaaatttgtctttgcttagacttcattcatatttgaattaac 44921460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 31342545 - 31342498
Alignment:
Q  167 ttagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31342545 ttagacttcattcatatttgaattaaccaatattagatacaagtttta 31342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 7702579 - 7702687
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgt 126  Q
    ||||||||| |||| ||||||||||||||||||| |||||| |        | ||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  7702579 aatgttacattattataacactttttgtatcactcgtaacactaaaaagt-tattacatttataatttttgagaagttgtaaaaaatgtcgcaaaattgt 7702677  T
Q  127 ctagactaaa 136  Q
    | || |||||    
T  7702678 ccaggctaaa 7702687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 27151189 - 27151080
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgt 126  Q
    ||||||||  |||||||||||||||||||||||  |||||| |        | ||||||||| ||||||| ||||| |||||||||||| |||||||| |    
T  27151189 aatgttaccttattgtaacactttttgtatcaccggtaacactaaaaaaaatattacatttataatttttaagaagttgtaaaaagtgtcgcaaaattat 27151090  T
Q  127 ctagactaaa 136  Q
    | ||||||||    
T  27151089 ccagactaaa 27151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 26734941 - 26735057
Alignment:
Q  84 atttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagact--aaannnnnnngaatctatcaaatttgtctttgattagacttcattcat 181  Q
    ||||| |||| |||||||| |||| ||||||| ||||| |||||||||||  |||       |||||||||||||| | ||||  |||||||||||| |     
T  26734941 atttataattattgagaagttgtataaagtgtcgcaaagttgtctagactaaaaaaaattaagaatctatcaaattagacttttcttagacttcattaag 26735040  T
Q  182 atttgaattaaccaata 198  Q
    |||||||||| ||||||    
T  26735041 atttgaattagccaata 26735057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 22967005 - 22967039
Alignment:
Q  167 ttagacttcattcatatttgaattaaccaatatta 201  Q
    |||||||||||||||||||||||| ||||||||||    
T  22967005 ttagacttcattcatatttgaattcaccaatatta 22967039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 12591955 - 12592181
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||       |||||||  ||| ||||||||||    
T  12591955 tatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtcacaataaaaaa-gtgttactattataatttttgag 12592053  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||| ||||||||| ||||       | ||||| |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  12592054 aagttgtaaaaagtgtcgcaaatttgtctagaataaaaaaatttggatctaccaaatttgtctttgcttagacttccttcatatttgaattaaccaatat 12592153  T
Q  200 taaatacaagtttt-ataacaaggttga 226  Q
    |||||||||||||| |||||||| ||||    
T  12592154 taaatacaagttttaataacaagtttga 12592181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6684222 - 6684448
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    ||||| || ||||| ||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||       ||||||| |||| || |||||||    
T  6684222 tatctataacaattaaaaagtgtcgcaaatgttatattattgtaacacttcttgtatcactagtaacaataaaata-gtgttacgtttataaattttgag 6684320  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| |||||||||||| ||||||||||||| ||||||       ||||||| ||||||| |||||  |||||||||||||||||||||||||||||||||    
T  6684321 aagttgtaaaaagtgtcgcaaaattgtctaaactaaagtttcttgaatctaccaaatttttctttacttagacttcattcatatttgaattaaccaatat 6684420  T
Q  200 taaatacaagtttt-ataacaaggttga 226  Q
    || ||||||||||| |||||||| ||||    
T  6684421 tagatacaagttttaataacaagtttga 6684448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 14669320 - 14669095
Alignment:
Q  5 tgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaaga 103  Q
    |||| ||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||     
T  14669320 tgtaacaattaaaaagtgtcacaaatgttacattattgtaacactttttgtatcactagtaacaat-aaaaaagtgttacatttataatttttgagaagt 14669222  T
Q  104 tgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgatta---gacttcattcatatttgaattaaccaatatt 200  Q
     ||||||||||| |||||||| |||||||||||       ||||||| ||||||| |||| | |||    ||||||||||||||||||||||||||||||    
T  14669221 cgtaaaaagtgtcgcaaaattatctagactaaatttttttgaatctaccaaatttatcttcgcttaaattacttcattcatatttgaattaaccaatatt 14669122  T
Q  201 aaatacaagtttt-ataacaaggttga 226  Q
    | ||||||||||| |||||||| ||||    
T  14669121 agatacaagttttaataacaagtttga 14669095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 17719701 - 17719474
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  17719701 tatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaacaat-aaaaaagtgttacatttataatttttgag 17719603  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagact-aaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaata 198  Q
    ||| |||||||||||| ||||||||||||| ||| |||       ||||||  ||||||||||||   ||| |||||||||| ||| |||||||||||||    
T  17719602 aagttgtaaaaagtgtcgcaaaattgtctaaactaaaatttttttgaatctcccaaatttgtcttcacttaaacttcattcagattagaattaaccaata 17719503  T
Q  199 ttaaatacaagtttt-ataacaaggttga 226  Q
    | | ||||||||||| |||||||| ||||    
T  17719502 tcatatacaagttttaataacaagtttga 17719474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 15361837 - 15362049
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  |||||||| |||| || |||  |||||||| ||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  15361837 tatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaaaactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 15361935  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  15361936 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt-aatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 15362034  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  15362035 tagatacaagtttta 15362049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16734927 - 16735139
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  |||||| |||||| || |||  |||||||||||||| ||||||||| ||||||||       |||||||||||| ||||||||||    
T  16734927 tatctgtaacaatcaaaaagtatcgcaaatggtaccttattgtaacactttctgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 16735025  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  16735026 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt-aatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 16735124  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  16735125 tagatacaagtttta 16735139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11936745 - 11936620
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  |||| |||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  11936745 tatctgtaacaataaaaaaatgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 11936647  T
Q  100 aagatgtaaaaagtgttgcaaaattgt 126  Q
     || |||||||||||||||||||||||    
T  11936646 gagttgtaaaaagtgttgcaaaattgt 11936620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11948725 - 11948600
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  |||| |||||||| || |||  |||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  11948725 tatctgtaacaataaaaaaatgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 11948627  T
Q  100 aagatgtaaaaagtgttgcaaaattgt 126  Q
     || |||||||||||||||||||||||    
T  11948626 gagttgtaaaaagtgttgcaaaattgt 11948600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 10070780 - 10070845
Alignment:
Q  5 tgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaat 69  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  10070780 tgtaacaatttaaaagtgtcgcaaatgttacattattgtaacactttttgtatcattagtaacaat 10070845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 10264025 - 10264077
Alignment:
Q  144 gaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaa 196  Q
    |||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  10264025 gaatctatcaaatttgtctttgcttagacttcaataatatttcaattaaccaa 10264077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 30481147 - 30481101
Alignment:
Q  90 aatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||||    
T  30481147 aatttttgagaaatggtaaaaagtgttgcaaagttgtctagactaaa 30481101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 725 - 498
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    ||||| || ||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  725 tatctataacaattaaaaagtgtcgcaaatgttacattattggaacactttttgtatcactagtaacaatgaaaaa-gtgttacatttataatttttgag 627  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||||| ||||       ||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||    
T  626 tagttgtaaaaagtgtcgcaaaattgtctagattaaatttttttgaatctaccaaatttgtcttcgcttaaacttcattcatatttgaattaaccaatat 527  T
Q  200 taaatacaag-ttttataacaaggttgat 227  Q
    || ||||||| ||| |||||||| |||||    
T  526 tagatacaagatttaataacaagtttgat 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 40676 - 40450
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| ||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||       || ||||||||| ||||||||||    
T  40676 tatctgtaacaattaaaaagtgtctcaaatgttacattatcgtaacactttttgtatcactagtaacaatgaaaaa-gttttacatttataatttttgag 40578  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| ||||||||||||  |||||||||||||| ||||       ||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||    
T  40577 aagttgtaaaaagtgtcccaaaattgtctagattaaatttttttgaatctaccaaatttgtcttcgcttaaacttcattcatatttgaattaaccaatat 40478  T
Q  200 taaatacaagtttta-taacaaggttga 226  Q
    || |||||||||||| ||||||| ||||    
T  40477 tagatacaagttttagtaacaagtttga 40450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 51758875 - 51759083
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||| |||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||       ||||||||||||  |||||||||    
T  51758875 tatctgtaacaattaaaaagtgttgcaaatgttacattattgtaacactttttgtatcaccagtaacaataaaaaa-gtgttacatttatgatttttgag 51758973  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
    ||| ||| ||  ||||  |||||||||||||||||||       ||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  51758974 aagttgtgaa--gtgtcacaaaattgtctagactaaatttttttgaatctaccaaatt-gtctttgcttagacttcattcatatttcaattaaccaatat 51759070  T
Q  200 taaatacaagttt 212  Q
    || ||||||||||    
T  51759071 tagatacaagttt 51759083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 897604 - 897769
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgt 126  Q
    ||||||||| ||||||||||||||||||||||| |||||||||        |||||||||||   |||||   ||| ||||||||||||||||||||  |    
T  897604 aatgttacattattgtaacactttttgtatcaccagtaacaattaaaaaa-tgttacatttagtttttttttaaagttgtaaaaagtgttgcaaaataat 897702  T
Q  127 ctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaac 193  Q
     ||||| ||        |||| || ||||||||| |||| ||||||||||||||||||| |||||||    
T  897703 atagaccaatgaattgtgaatttaccaaatttgtttttgcttagacttcattcatatttaaattaac 897769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 18308298 - 18308397
Alignment:
Q  27 aatgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgt 126  Q
    ||||||||| |||||||||||||||||||||||   ||||| |        ||||||||||| ||||||||||||| | |||||||||||||||| ||||    
T  18308298 aatgttacattattgtaacactttttgtatcaccgataacactagaaaaa-tgttacatttataatttttgagaagttataaaaagtgttgcaaagttgt 18308396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 28637576 - 28637634
Alignment:
Q  78 tgttacatttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    ||||||||| | |||||||||| || |||||||||||| |||||||| |||||||||||    
T  28637576 tgttacattcataatttttgagtagttgtaaaaagtgtcgcaaaattatctagactaaa 28637634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 28637040 - 28637091
Alignment:
Q  16 aaaagtgtcgca--atgttacactattgtaacactttttgtatcactagtaa 65  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||| |||||    
T  28637040 aaaagtgtcgcacaatgttacattattgtaacactttttgtatcaccagtaa 28637091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 39368602 - 39368557
Alignment:
Q  16 aaaagtgtcgcaa--tgttacactattgtaacactttttgtatcac 59  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||    
T  39368602 aaaagtgtcgcaaaatgttacattattgtaacactttttgtatcac 39368557  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 17113133 - 17113185
Alignment:
Q  84 atttacaatttttgagaagatgtaaaaagtgttgcaaaattgtctagactaaa 136  Q
    ||||| ||||| ||| ||| |||||||||||| ||||| ||||||||||||||    
T  17113133 atttataatttgtgaaaagttgtaaaaagtgtcgcaaagttgtctagactaaa 17113185  T

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Target: scaffold0576 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 6821 - 7033
Alignment:
Q  1 tatctgtatcaattcaaaagtgtcgcaa-tgttacactattgtaacactttttgtatcactagtaacaatnnnnnnngtgttacatttacaatttttgag 99  Q
    |||||||| ||||  |||||||| |||| || |||  |||||||| ||||||||||||||| ||||||||       |||||||||||| ||||||||||    
T  6821 tatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaaaactttttgtatcacttgtaacaataaaaaa-gtgttacatttataatttttgag 6919  T
Q  100 aagatgtaaaaagtgttgcaaaattgtctagactaaannnnnnngaatctatcaaatttgtctttgattagacttcattcatatttgaattaaccaatat 199  Q
     || |||||||||||| ||||||||||||| |||||         ||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  6920 gagttgtaaaaagtgtcgcaaaattgtctaaactaatttttttt-aatttaccaaatttgtctttgcttagacttcattcatatttgaattaaccaatat 7018  T
Q  200 taaatacaagtttta 214  Q
    || ||||||||||||    
T  7019 tagatacaagtttta 7033  T

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Target: scaffold0105 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 438 - 386
Alignment:
Q  160 tctttgattagacttcattcatatttgaattaaccaatattaaatacaagtttta 214  Q
    |||||| |||||||||||||||||||||||||||  |||||| | ||||||||||    
T  438 tctttgcttagacttcattcatatttgaattaac--atattagagacaagtttta 386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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