View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6131_high_19 (Length: 514)

Name: NF6131_high_19
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6131_high_19
NF6131_high_19
[»] chr7 (47 HSPs)
chr7 (229-496)||(21955506-21955763)
chr7 (48-228)||(37471491-37471671)
chr7 (48-228)||(32795678-32795858)
chr7 (48-228)||(24764155-24764335)
chr7 (48-201)||(36992158-36992311)
chr7 (48-192)||(34202628-34202771)
chr7 (48-228)||(37085721-37085901)
chr7 (49-228)||(35528351-35528530)
chr7 (62-228)||(47761670-47761836)
chr7 (48-192)||(555728-555872)
chr7 (48-192)||(39560505-39560649)
chr7 (48-191)||(8613754-8613897)
chr7 (48-192)||(29507945-29508089)
chr7 (52-191)||(3699181-3699320)
chr7 (48-231)||(30071986-30072169)
chr7 (48-228)||(13598037-13598217)
chr7 (66-230)||(8781447-8781611)
chr7 (48-228)||(33889180-33889360)
chr7 (62-228)||(17195475-17195641)
chr7 (48-192)||(5215691-5215835)
chr7 (49-229)||(33626898-33627078)
chr7 (62-228)||(47099118-47099284)
chr7 (48-188)||(32527976-32528115)
chr7 (48-192)||(9696997-9697129)
chr7 (98-229)||(40685628-40685759)
chr7 (82-199)||(33590279-33590396)
chr7 (48-192)||(42976701-42976845)
chr7 (48-184)||(3319007-3319143)
chr7 (48-192)||(15457160-15457303)
chr7 (48-192)||(31325370-31325514)
chr7 (117-228)||(48137246-48137357)
chr7 (48-173)||(22791769-22791895)
chr7 (65-190)||(2370744-2370869)
chr7 (48-188)||(34349680-34349820)
chr7 (97-192)||(34182088-34182182)
chr7 (51-188)||(36863263-36863400)
chr7 (48-173)||(8632778-8632903)
chr7 (48-189)||(46817041-46817180)
chr7 (50-191)||(49112335-49112476)
chr7 (51-192)||(23108543-23108684)
chr7 (48-101)||(40683489-40683542)
chr7 (82-190)||(18834231-18834339)
chr7 (140-192)||(48949603-48949655)
chr7 (62-115)||(48949549-48949602)
chr7 (48-183)||(10013252-10013386)
chr7 (48-95)||(40921631-40921678)
chr7 (82-134)||(36643394-36643446)
[»] chr3 (47 HSPs)
chr3 (48-228)||(41933241-41933421)
chr3 (48-228)||(7910131-7910311)
chr3 (48-232)||(1694938-1695122)
chr3 (48-192)||(26898218-26898362)
chr3 (48-196)||(9301033-9301181)
chr3 (48-192)||(55423716-55423860)
chr3 (48-199)||(26823011-26823162)
chr3 (48-229)||(31412107-31412287)
chr3 (56-229)||(33911618-33911791)
chr3 (48-230)||(54313318-54313500)
chr3 (48-192)||(1842538-1842682)
chr3 (48-228)||(43087933-43088113)
chr3 (49-228)||(39095227-39095406)
chr3 (48-230)||(3994990-3995172)
chr3 (48-192)||(10804509-10804653)
chr3 (48-192)||(50155517-50155661)
chr3 (48-230)||(3974705-3974887)
chr3 (57-229)||(17525302-17525473)
chr3 (64-196)||(14741005-14741137)
chr3 (48-228)||(32774414-32774594)
chr3 (48-192)||(41879387-41879531)
chr3 (62-229)||(29522785-29522952)
chr3 (62-191)||(33215392-33215521)
chr3 (48-228)||(49318267-49318447)
chr3 (48-196)||(51744103-51744252)
chr3 (62-191)||(51885297-51885426)
chr3 (62-192)||(7399701-7399832)
chr3 (48-191)||(42480988-42481131)
chr3 (48-228)||(1460258-1460438)
chr3 (82-219)||(10267812-10267949)
chr3 (48-188)||(24570265-24570405)
chr3 (62-228)||(12768564-12768730)
chr3 (82-188)||(15489084-15489190)
chr3 (48-188)||(1557332-1557471)
chr3 (48-204)||(35603810-35603966)
chr3 (48-228)||(36638061-36638241)
chr3 (49-188)||(44845231-44845370)
chr3 (74-229)||(28970527-28970683)
chr3 (86-228)||(41209396-41209537)
chr3 (64-228)||(39620438-39620602)
chr3 (48-192)||(44310251-44310395)
chr3 (49-116)||(28816103-28816170)
chr3 (62-192)||(53468080-53468209)
chr3 (115-226)||(49506100-49506211)
chr3 (48-105)||(15646479-15646536)
chr3 (150-192)||(27182399-27182441)
chr3 (150-192)||(30105825-30105867)
[»] chr1 (41 HSPs)
chr1 (48-231)||(5114866-5115049)
chr1 (48-229)||(40601710-40601891)
chr1 (48-229)||(44372860-44373041)
chr1 (48-229)||(48812516-48812697)
chr1 (48-192)||(30723300-30723444)
chr1 (48-228)||(19406610-19406790)
chr1 (48-228)||(39995436-39995616)
chr1 (48-192)||(41310505-41310649)
chr1 (62-229)||(28199180-28199347)
chr1 (48-191)||(1858752-1858895)
chr1 (48-228)||(699871-700051)
chr1 (48-191)||(48913581-48913724)
chr1 (48-229)||(44922154-44922335)
chr1 (48-192)||(35985469-35985613)
chr1 (48-228)||(50511957-50512137)
chr1 (48-233)||(33814903-33815087)
chr1 (48-233)||(33874373-33874557)
chr1 (73-226)||(42102156-42102308)
chr1 (62-191)||(47034514-47034643)
chr1 (48-228)||(40412495-40412675)
chr1 (65-191)||(38235638-38235764)
chr1 (108-228)||(52929451-52929571)
chr1 (62-196)||(45826663-45826797)
chr1 (48-228)||(23974159-23974338)
chr1 (48-184)||(25423271-25423407)
chr1 (62-229)||(48940765-48940937)
chr1 (49-191)||(48605821-48605962)
chr1 (62-179)||(20722202-20722319)
chr1 (50-175)||(21088508-21088633)
chr1 (48-229)||(45794063-45794240)
chr1 (106-191)||(39003048-39003133)
chr1 (48-192)||(343113-343242)
chr1 (48-154)||(21719945-21720051)
chr1 (118-192)||(46868747-46868821)
chr1 (63-160)||(25155740-25155837)
chr1 (82-160)||(27414061-27414139)
chr1 (48-228)||(6715105-6715284)
chr1 (48-228)||(12255175-12255347)
chr1 (62-156)||(50863858-50863952)
chr1 (48-95)||(46868829-46868876)
chr1 (48-77)||(52929413-52929442)
[»] chr8 (42 HSPs)
chr8 (48-229)||(6266235-6266416)
chr8 (48-229)||(5927042-5927223)
chr8 (48-228)||(24101721-24101901)
chr8 (48-191)||(11202155-11202298)
chr8 (62-229)||(41395775-41395942)
chr8 (48-229)||(38231701-38231881)
chr8 (48-192)||(26098274-26098418)
chr8 (48-192)||(41827527-41827671)
chr8 (49-229)||(42935752-42935931)
chr8 (62-228)||(31894922-31895087)
chr8 (48-201)||(40027736-40027889)
chr8 (48-192)||(37819212-37819356)
chr8 (48-199)||(28994756-28994905)
chr8 (48-189)||(14615550-14615691)
chr8 (48-188)||(7161575-7161715)
chr8 (48-192)||(24476356-24476500)
chr8 (48-202)||(15041326-15041480)
chr8 (48-192)||(41644150-41644294)
chr8 (49-228)||(20823477-20823656)
chr8 (49-188)||(27639993-27640132)
chr8 (48-202)||(21412435-21412589)
chr8 (48-202)||(21806927-21807081)
chr8 (48-188)||(7433414-7433554)
chr8 (62-191)||(37255569-37255698)
chr8 (64-192)||(44679145-44679273)
chr8 (49-228)||(29940068-29940247)
chr8 (48-228)||(356409-356589)
chr8 (56-228)||(40027534-40027706)
chr8 (49-228)||(7764302-7764481)
chr8 (89-228)||(38894680-38894819)
chr8 (82-228)||(5913259-5913405)
chr8 (48-202)||(32018318-32018472)
chr8 (66-169)||(43067084-43067187)
chr8 (48-192)||(5924532-5924661)
chr8 (82-191)||(22487330-22487439)
chr8 (48-228)||(23192839-23193019)
chr8 (62-148)||(957506-957592)
chr8 (131-229)||(32925404-32925502)
chr8 (48-101)||(18654488-18654541)
chr8 (90-185)||(34347019-34347114)
chr8 (48-117)||(30874177-30874246)
chr8 (144-192)||(20983839-20983887)
[»] chr4 (54 HSPs)
chr4 (48-228)||(56264379-56264559)
chr4 (49-229)||(401334-401514)
chr4 (48-228)||(6643269-6643449)
chr4 (48-228)||(19823619-19823799)
chr4 (48-228)||(53724827-53725007)
chr4 (49-228)||(53925306-53925485)
chr4 (48-192)||(35392748-35392892)
chr4 (48-192)||(50097395-50097539)
chr4 (48-191)||(15194480-15194623)
chr4 (62-229)||(40731191-40731358)
chr4 (48-201)||(51435550-51435703)
chr4 (48-192)||(26706883-26707027)
chr4 (48-192)||(54093962-54094106)
chr4 (48-229)||(19521739-19521920)
chr4 (48-192)||(24678272-24678416)
chr4 (48-228)||(30000213-30000392)
chr4 (48-188)||(39240400-39240540)
chr4 (48-192)||(39809594-39809738)
chr4 (62-192)||(35666583-35666713)
chr4 (48-225)||(56114169-56114346)
chr4 (62-222)||(1138978-1139138)
chr4 (48-192)||(16623462-16623606)
chr4 (48-192)||(34435894-34436037)
chr4 (48-229)||(48152681-48152847)
chr4 (62-192)||(18861623-18861751)
chr4 (48-201)||(44871486-44871639)
chr4 (48-196)||(41140601-41140749)
chr4 (48-192)||(13563374-13563506)
chr4 (48-230)||(32555640-32555822)
chr4 (82-192)||(36694112-36694222)
chr4 (51-192)||(19474665-19474806)
chr4 (49-192)||(41883116-41883259)
chr4 (48-191)||(56519969-56520111)
chr4 (48-228)||(52278776-52278955)
chr4 (62-229)||(33493102-33493269)
chr4 (48-158)||(49480751-49480861)
chr4 (48-228)||(41831169-41831349)
chr4 (51-190)||(45849299-45849438)
chr4 (48-229)||(16346855-16347021)
chr4 (114-201)||(51031641-51031728)
chr4 (48-192)||(4709252-4709381)
chr4 (107-228)||(6366323-6366444)
chr4 (125-201)||(42248053-42248129)
chr4 (64-155)||(24534651-24534741)
chr4 (117-230)||(40226904-40227017)
chr4 (62-173)||(42587327-42587438)
chr4 (48-119)||(48500306-48500377)
chr4 (62-228)||(31616494-31616660)
chr4 (62-165)||(35013830-35013933)
chr4 (150-228)||(48500383-48500461)
chr4 (144-229)||(20671894-20671979)
chr4 (48-98)||(8907050-8907100)
chr4 (60-92)||(31290614-31290646)
chr4 (62-185)||(32767598-32767722)
[»] chr2 (38 HSPs)
chr2 (48-230)||(31742840-31743022)
chr2 (48-228)||(27495846-27496026)
chr2 (48-192)||(1346246-1346390)
chr2 (48-228)||(1002473-1002653)
chr2 (48-192)||(10261308-10261452)
chr2 (48-228)||(30555605-30555785)
chr2 (48-228)||(31618062-31618242)
chr2 (50-229)||(28222875-28223054)
chr2 (48-230)||(12847831-12848013)
chr2 (48-190)||(35439504-35439646)
chr2 (62-228)||(36240734-36240900)
chr2 (62-228)||(29810679-29810845)
chr2 (48-228)||(10822246-10822426)
chr2 (48-228)||(26984434-26984614)
chr2 (62-229)||(27551936-27552103)
chr2 (48-229)||(23334006-23334189)
chr2 (48-192)||(45517162-45517306)
chr2 (62-192)||(10440139-10440269)
chr2 (48-177)||(38962213-38962342)
chr2 (48-224)||(41644258-41644434)
chr2 (48-228)||(42799478-42799657)
chr2 (62-192)||(13247727-13247857)
chr2 (62-192)||(30016206-30016336)
chr2 (48-192)||(30801174-30801318)
chr2 (48-178)||(2650055-2650186)
chr2 (48-199)||(34313729-34313880)
chr2 (62-202)||(18258032-18258172)
chr2 (48-231)||(2557616-2557799)
chr2 (48-228)||(10709709-10709889)
chr2 (48-228)||(19944766-19944946)
chr2 (48-191)||(25868901-25869044)
chr2 (48-196)||(37209506-37209654)
chr2 (62-189)||(13311525-13311652)
chr2 (48-165)||(27258811-27258928)
chr2 (48-192)||(20932462-20932597)
chr2 (82-201)||(12017480-12017599)
chr2 (92-226)||(9439274-9439408)
chr2 (82-228)||(37208889-37209036)
[»] chr5 (48 HSPs)
chr5 (48-229)||(7949694-7949875)
chr5 (48-228)||(26264358-26264538)
chr5 (48-228)||(26507198-26507378)
chr5 (48-229)||(24566188-24566369)
chr5 (48-229)||(24607224-24607405)
chr5 (48-192)||(28759338-28759482)
chr5 (49-191)||(20122706-20122848)
chr5 (48-228)||(39479307-39479487)
chr5 (50-229)||(5361142-5361320)
chr5 (48-192)||(1840513-1840657)
chr5 (48-228)||(16748916-16749096)
chr5 (48-191)||(27345231-27345374)
chr5 (48-192)||(16653904-16654048)
chr5 (48-228)||(17320331-17320511)
chr5 (48-228)||(18922122-18922302)
chr5 (48-188)||(43320498-43320638)
chr5 (48-189)||(7073962-7074103)
chr5 (62-192)||(2466288-2466418)
chr5 (48-228)||(21162640-21162820)
chr5 (48-228)||(7344656-7344836)
chr5 (48-228)||(21151697-21151877)
chr5 (48-228)||(21158832-21159012)
chr5 (66-204)||(2800615-2800752)
chr5 (66-204)||(2806784-2806921)
chr5 (48-230)||(4725139-4725320)
chr5 (62-228)||(8320477-8320643)
chr5 (48-202)||(17016470-17016624)
chr5 (48-192)||(1463066-1463208)
chr5 (62-191)||(36682732-36682861)
chr5 (48-192)||(14505870-14506014)
chr5 (97-191)||(5494666-5494760)
chr5 (62-228)||(24316511-24316677)
chr5 (62-230)||(7826924-7827092)
chr5 (51-229)||(39048633-39048810)
chr5 (107-228)||(38062946-38063066)
chr5 (48-191)||(41203305-41203444)
chr5 (49-121)||(39088998-39089070)
chr5 (48-120)||(8321755-8321827)
chr5 (48-123)||(6286172-6286247)
chr5 (48-137)||(19646925-19647014)
chr5 (49-173)||(31878069-31878193)
chr5 (85-228)||(39087644-39087786)
chr5 (108-190)||(9528662-9528744)
chr5 (48-228)||(39754368-39754541)
chr5 (82-228)||(7726342-7726488)
chr5 (150-192)||(39088952-39088994)
chr5 (48-85)||(5494758-5494795)
chr5 (143-192)||(6286128-6286177)
[»] chr6 (23 HSPs)
chr6 (48-228)||(2702963-2703143)
chr6 (48-228)||(17547462-17547642)
chr6 (48-226)||(29641012-29641190)
chr6 (48-201)||(4170901-4171054)
chr6 (54-226)||(31511197-31511369)
chr6 (48-228)||(26555184-26555368)
chr6 (48-192)||(2067144-2067288)
chr6 (48-227)||(15183712-15183892)
chr6 (48-192)||(22988137-22988281)
chr6 (48-192)||(23800115-23800259)
chr6 (48-192)||(9035066-9035210)
chr6 (48-228)||(15067987-15068167)
chr6 (48-228)||(12577291-12577470)
chr6 (48-189)||(32897086-32897227)
chr6 (92-228)||(34178403-34178539)
chr6 (62-173)||(29034472-29034583)
chr6 (48-229)||(13835884-13836065)
chr6 (62-228)||(21036030-21036196)
chr6 (48-173)||(26483659-26483784)
chr6 (117-228)||(13087706-13087817)
chr6 (48-202)||(28985265-28985422)
chr6 (48-95)||(13087824-13087871)
chr6 (76-135)||(2289979-2290038)
[»] scaffold0036 (1 HSPs)
scaffold0036 (48-229)||(27586-27767)
[»] scaffold0124 (1 HSPs)
scaffold0124 (48-229)||(40024-40205)
[»] scaffold0007 (2 HSPs)
scaffold0007 (48-228)||(56195-56374)
scaffold0007 (82-192)||(231673-231783)
[»] scaffold0664 (1 HSPs)
scaffold0664 (48-186)||(7751-7889)
[»] scaffold1318 (1 HSPs)
scaffold1318 (48-188)||(950-1090)
[»] scaffold0360 (1 HSPs)
scaffold0360 (48-192)||(12770-12914)
[»] scaffold0831 (1 HSPs)
scaffold0831 (48-201)||(39-192)
[»] scaffold0661 (1 HSPs)
scaffold0661 (48-228)||(1534-1714)
[»] scaffold0171 (1 HSPs)
scaffold0171 (49-190)||(2317-2458)
[»] scaffold0173 (1 HSPs)
scaffold0173 (107-228)||(21970-22091)
[»] scaffold1243 (1 HSPs)
scaffold1243 (82-228)||(1976-2122)
[»] scaffold0019 (1 HSPs)
scaffold0019 (48-191)||(103079-103222)
[»] scaffold0461 (2 HSPs)
scaffold0461 (107-229)||(2379-2501)
scaffold0461 (107-229)||(9315-9437)
[»] scaffold0583 (1 HSPs)
scaffold0583 (117-228)||(2201-2312)
[»] scaffold0079 (1 HSPs)
scaffold0079 (48-229)||(45840-46006)
[»] scaffold0951 (1 HSPs)
scaffold0951 (48-154)||(1541-1645)
[»] scaffold0021 (2 HSPs)
scaffold0021 (103-192)||(125875-125964)
scaffold0021 (48-101)||(120949-121002)
[»] scaffold0041 (1 HSPs)
scaffold0041 (48-95)||(51417-51464)


Alignment Details
Target: chr7 (Bit Score: 137; Significance: 3e-71; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 229 - 496
Target Start/End: Original strand, 21955506 - 21955763
Alignment:
229 cctgccttattatctcctgctatcttgccagctctattccctaccatctgatcaatccaatggatgagacnnnnnnnnnnnnnnnnnn-ggaaatagaga 327  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||                   |||||||||||    
21955506 cctgccttattatctcctgctatctcgccagctctattccctaccatctgatcaatctaatggatgagacaaaacaaacattaaaaaaaggaaatagaga 21955605  T
328 gagaaacgtactatattccgatagacttataagctgatttggtgtttaggtgaaggaagtggccaatcaatcacgtcatctttgggcagaacacaccgtc 427  Q
    ||||||||||||| |||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
21955606 gagaaacgtactacatt-----------ataagctgatttggtgtttaggtgaaggaagtggccaatcaatcacgtcatctttgagcagaatacaccgtc 21955694  T
428 agtgtaaagctttttacacactcaccaacaaaccactaccactatgtacaaagtttcgctgttcatgta 496  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
21955695 agtgtaaagctttttacacactcaccaacaaaccactgcgactatgtaaaaagtttcgctgttcatgta 21955763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 37471491 - 37471671
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
37471491 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 37471590  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| ||||  ||||||||||||||||||||||||| ||| ||||| || || |||||||||||||||||||    
37471591 tcaatattttaggcccaagtcctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 37471671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 32795858 - 32795678
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
32795858 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 32795759  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||  |||| ||||||||||||||||||||||||||  || ||||| || || |||||||||||||||||||    
32795758 tcaatattttagacccaagccctatatttattcgggctaaacgggctggcccatacgggccggcccgttttgacagctcta 32795678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 24764335 - 24764155
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| |||||||||||||||| |    
24764335 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacggataccgggcttttaagggccgggctaaaaagccctattaaaattcggac 24764236  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
      ||||||||||| |||| |||||||||||||| ||||||||||| ||| ||||| |  || |||||||||||||||||||    
24764235 acaatattttaggcccaagccctatatttattcaggctaaacgggccggcccatacgacccggcccgttttgacagctcta 24764155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 36992311 - 36992158
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||    
36992311 gttatgcggactaacgggctacctgcggcccattcgggctagccctaacggataccgggcttttaagggccgggctaaaaaaccctattaaaattcgggc 36992212  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    | ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
36992211 tcaatattttaggcccaaaccctatatttattcaggctaaacgggccggtccat 36992158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 34202628 - 34202771
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||||  |||    
34202628 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaatt-tggc 34202726  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
34202727 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 34202771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 37085901 - 37085721
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||||||||||    
37085901 gttatgcgggttaacgggctacccgcggcccgttcgggctagccctaacgggtaccagacttttaagggccgggctaaaaagtcctattaaaattcgggc 37085802  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| | ||||||||||||| ||||||| || |   ||||| ||||| |||||||||||||||||||    
37085801 tcaatattttaggcccaagctctatatttattcgtgctaaacaggccaacccatacggtccggcccgttttgacagctcta 37085721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 35528351 - 35528530
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||||||| |    
35528351 ttatgcaggctaacgggctacccgcggcccgttcaggctagccctaacgggtaccgggctttttagggccgggctaaaaaaccctattaaaattcgggat 35528450  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
     ||||||| |||||||| ||||||| ||| |||||||||||||  ||| || ||||| || |||||||||||||||||||    
35528451 caatatttaaggtccaagccctataattaatcgggctaaacggaccggaccgtatggcccggcccgttttgacagctcta 35528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 47761670 - 47761836
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||     
47761670 cgggctacccgcggcctattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttaggc 47761769  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||  | ||||||||||||| |||||    
47761770 ccaagccctatatttattcgggctaaacgggccggtccatacgggtcggcccgttttgacatctcta 47761836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 555728 - 555872
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||  ||||||||| ||||| | |||||||||||||||||||||||    
555728 gttatgcgggctaacgggctacccacggcccgttcggactagccctaacgggtaccgagcttttaaggcccgggttaaaaaaccctattaaaattcgggc 555827  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
555828 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 555872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 39560649 - 39560505
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||||| |||| ||||||||||||||||||    
39560649 gttatgcgggcgaacgggctacccgcggcccattcgggctagccctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggc 39560550  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
39560549 tcaatattttaggcccaagccctatatttattcgggctaaacggg 39560505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 8613897 - 8613754
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
8613897 gttatgcgggctaacgggctacccgcagcccattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 8613798  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||||||| |||| |||||||||||||||||||||||||    
8613797 tcaatattttaggcccaagccctatatttattcgggctaaacgg 8613754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 29508089 - 29507945
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||| || |||| ||||||||||||||  ||    
29508089 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgaatttttaagggccggactaaaaagccctattaaaattctagc 29507990  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
29507989 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 29507945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 3699320 - 3699181
Alignment:
52 tgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaa 151  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||| | |||| ||||||||||||||||||| ||    
3699320 tgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaaggaccgggttaaaaagccctattaaaattcgggctcaa 3699221  T
152 tattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
3699220 tattttaggcccaaaccctatatttattcgggctatacgg 3699181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 30072169 - 30071986
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||| |||| |||||| ||||| |||| ||||||||||||| ||||    
30072169 gttatgcgggctaacgggctacccgcagcccgttcgggttagccctaacgggtaacgggctttaaagggctgggctaaaaagccctattaaaatttgggc 30072070  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacct 231  Q
    | |||||||||||||||| ||||||||||||||||| |||||||| ||| ||||| |  ||  || ||||||||||||||||||    
30072069 tcaatattttaggtccaagccctatatttattcgggttaaacgggccggcccatacgacccgacctgttttgacagctctacct 30071986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 13598217 - 13598037
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| || || ||| ||||| ||||||||||| |||| |||||||||||||||| |    
13598217 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacggatagcgggctttttagggccgggctaaaaagccctattaaaattcggac 13598118  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| | ||||||| || |  |||||||||||||||||||    
13598117 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccagtccatacggcctggcccgttttgacagctcta 13598037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 8781611 - 8781447
Alignment:
66 ctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaa 165  Q
    |||||| ||||||||||||||||||||||| ||||| ||| ||||| ||| ||||||| |||| ||||||||||||||||||| ||||||| ||| ||||    
8781611 ctaccctcggcccgttcgggctagccctaacgggtagcgggctttttaggaccgggctaaaaagccctattaaaattcgggctcaatatttaaggcccaa 8781512  T
166 accctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
     ||||||| ||| |||||||||||||| ||| |||||||| ||  ||||||||||||||||||||    
8781511 gccctataattaatcgggctaaacgggccggcccatatggcccgacccgttttgacagctctacc 8781447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 33889360 - 33889180
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| |||||| ||||| ||||||| ||||||||||||||||| |  |||||| ||||||||||||||||| |||| | ||||||||||||||||    
33889360 gttatgcggcctaacgagctacgcgcggcctgttcgggctagccctaacgaataccgggcttttaagggccgggctaaaaagctctattaaaattcgggc 33889261  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||| ||||||||||||||| ||  ||||| |  |  |||||||||||||||||||    
33889260 tcaatattttaggcccaagccctatattttttcgggctaaacgggccgacccatacgacctggcccgttttgacagctcta 33889180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 17195641 - 17195475
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |||| || || |||||||||| || ||||||| |||     
17195641 cgggctacccgcggcccgttcgggctagccctaacgggtaccggactttttagggtcgggctaaaaagccatagtaaaattcggactcaatatttaaggc 17195542  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||| ||||||| ||| |||||||||||||| ||| || || || || |||||||||||||||||||    
17195541 ccaagccctataattaatcgggctaaacgggccggcccgtaaggcccggcccgttttgacagctcta 17195475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 5215835 - 5215691
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||||| || |||||| ||||||||||| ||||| |||| ||||||||||||||| ||    
5215835 gttatgcaggctaacgggctacccgcggcccattcgaactagccctaacggataccgggcttttaagggctgggctaaaaagccctattaaaattcgagc 5215736  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | |||||||||   |||||||||||||||||||||||||||||||    
5215735 tcaatattttaaacccaaaccctatatttattcgggctaaacggg 5215691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 33626898 - 33627078
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||| ||||| |||||||||| | ||||||||| ||||||||||| ||||| |||  |||| ||||||||||| |||| |||||||||||||||||||    
33626898 ttatgcaggctagcgggctaccctcagcccgttcgagctagccctaacgggtagcggggtttttagggccgggctaaaaagccctattaaaattcgggct 33626997  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
     ||||||| ||| |||| ||||||||||| | |||||||| ||||||| || ||||| || |||| |||||||||||||||    
33626998 caatatttaaggcccaagccctatatttaattgggctaaatgggtcggaccgtatgggccggcccattttgacagctctac 33627078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 47099284 - 47099118
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |   ||||||||||||||| |||| |||| |||||||||||||| |||||||||||     
47099284 cgggctacccgtggcccgttcgggctagccctaacgggtaccaggtatttaagggccgggctaaaaagccctgttaaaattcgggctcaatattttaggc 47099185  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | || ||||||||||||| |||||||||||||||| | ||| || || ||| ||| |||||||||||    
47099184 ctaagccctatatttatttgggctaaacgggtcggcctatacggcccggcctgttgtgacagctcta 47099118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 32527976 - 32528115
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||    
32527976 gttatgcaggctaacgggctacccgtggcccgttcgggctagccctaacgggtaccggactttttaggaccgggct-aaaaagcctattaaaatttgggc 32528074  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | ||||||| |||||||| ||||||| ||| || |||||||    
32528075 tcaatatttaaggtccaagccctataattaatcaggctaaa 32528115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 9696997 - 9697129
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||            ||||||||||||||||    
9696997 gttatgcgggctaacggactacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccg------------ctattaaaattcgggc 9697084  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
9697085 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 9697129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 98 - 229
Target Start/End: Original strand, 40685628 - 40685759
Alignment:
98 ggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggt 197  Q
    |||||||| |||||||||| |||||| |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||      
40685628 ggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggctcaatattttaggcccaagccctatatttattcgggctaaacgggccgac 40685727  T
198 ccatatggtcctgcccgttttgacagctctac 229  Q
    ||||| || || ||||||||||||||||||||    
40685728 ccatacggaccggcccgttttgacagctctac 40685759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 33590279 - 33590396
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||||||  ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||| | |||||||||||||    
33590279 cgggctagccctaatgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggctaaatattttaggcccaagctctatatttattcg 33590378  T
182 ggctaaacgggtcggtcc 199  Q
    ||||||||||| ||||||    
33590379 ggctaaacgggccggtcc 33590396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 42976845 - 42976701
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||| |||||| |||| |||| ||||||||||||| ||||    
42976845 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaatgggtacctatctttttagggccaggctaaaaagccctattaaaatttgggc 42976746  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| ||  |||| ||||||| ||| | ||||||||||||    
42976745 tcaatatttaagacccaagccctataattaattgggctaaacggg 42976701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 3319007 - 3319143
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||  ||||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||| |||||||||||||||||||    
3319007 gttatgcgggtaaacgggctacctgcagcccgttcgggctagccctaacgggtaccgggctttttagggccgggctaaaagaccctattaaaattcgggc 3319106  T
148 ttaatattttaggtccaaaccctatatttattcgggc 184  Q
    | ||||||| ||  |||| ||||||| ||| ||||||    
3319107 tcaatatttaagacccaagccctataattaatcgggc 3319143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 15457160 - 15457303
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||| |||||| |||| |||| ||||||||||||| ||||    
15457160 gttatgcgagctaacgggctacccgcggcccgttgggg-tagccctaacgggtaccgggctttttagggcccggctaaaaagccctattaaaatttgggc 15457258  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| ||| ||||  |||||| ||| ||||||||||||||    
15457259 tcaatatttaaggcccaaggcctataattaatcgggctaaacggg 15457303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 31325514 - 31325370
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||  ||||||| || |||| || |||||||| ||||||||||||| ||||||| |    
31325514 gttatgcgggctaatgggctacccgcagcccattcgggctagccctatcgggtaccagagtttttagtgccgggctaaaaaaccctattacaattcggac 31325415  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| ||| |||| | ||||| ||||||||||||||||||    
31325414 tcaatatttaaggcccaagcgctataattattcgggctaaacggg 31325370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 48137246 - 48137357
Alignment:
117 ccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgtt 216  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| ||| | ||||| || || |||||||    
48137246 ccgggctaaaaagccctattaaaattcgggctcaatattttaggcccaagccctatatttattcgggctaaacgagtctgcccatacggcccggcccgtt 48137345  T
217 ttgacagctcta 228  Q
    ||||||||||||    
48137346 ttgacagctcta 48137357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 22791769 - 22791895
Alignment:
48 gttatgcgggctaacgggctaccc-gcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcggg 146  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |  |||| |||| |||||| ||||||||||||||||||||||    
22791769 gttatgcgggctaacgggctaccccgcggcccgttcgggctagccctaacgggtaccaggttttttagggtcgggctaaaaaaccctattaaaattcggg 22791868  T
147 cttaatattttaggtccaaaccctata 173  Q
     | ||||||| ||| || | |||||||    
22791869 ttcaatatttaaggcccgagccctata 22791895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 65 - 190
Target Start/End: Original strand, 2370744 - 2370869
Alignment:
65 gctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtcca 164  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||| ||||||| ||| |||| |||||||||||||| |||| ||||||| ||  |||    
2370744 gctacccgcggctcgttcgggctagccctaacgagtaccggactttttagggccgagctaaaaagccctattaaaattcaggctcaatatttaagaccca 2370843  T
165 aaccctatatttattcgggctaaacg 190  Q
    ||||||||| ||| ||||| ||||||    
2370844 aaccctataattaatcgggttaaacg 2370869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 34349820 - 34349680
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||| |||||||||||||||||| ||| |||||||| |||||||||| || || ||| ||||| || || || || |||| ||||||||||||||||||    
34349820 gttatacgggctaacgggctaccctcggtccgttcggactagccctaacggatagcgggctttttagagctggactaaaaagccctattaaaattcgggc 34349721  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | ||||||| |||||||| ||||||| ||| ||||||||||    
34349720 tcaatatttaaggtccaatccctataattaatcgggctaaa 34349680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 34182088 - 34182182
Alignment:
97 gggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||    
34182088 gggtaccgggcttttaagggccgggctaaaaagccctattaaaatttgg-ctcaatattttaggcccaaaccctatatttattcgggctaaacggg 34182182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 36863400 - 36863263
Alignment:
51 atgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctta 150  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||| | | ||| |||||||||||||||| |||||| |||||| ||||| |    
36863400 atgcgggttaacgggatacccgcggcccgttcggactagccctaacgggtacctggccttttagggccgggctgaaaagccctataaaaattagggctca 36863301  T
151 atattttaggtccaaaccctatatttattcgggctaaa 188  Q
    |||||| ||| |||| | ||||| ||| ||| ||||||    
36863300 atatttaaggcccaagctctataattaatcgtgctaaa 36863263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 8632903 - 8632778
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||||| ||||||| | ||||| |    |||||| |||| |||||| |||||||||||    
8632903 gttatgcgaggtaacgggttacccgcggcccgttcgggctagccctaacgggtaccaggcttttcaatctcgggctaaaaatccctataaaaattcgggc 8632804  T
148 ttaatattttaggtccaaaccctata 173  Q
    |||| |||| ||| ||||||||||||    
8632803 ttaaaatttaaggcccaaaccctata 8632778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 189
Target Start/End: Original strand, 46817041 - 46817180
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||  |||||  |||| |||||||||| |||||| |||||||| |||  |||| | ||||||| |||||||||||| ||    
46817041 gttatgcgggctaacgggctacccatggccctctcgg-ctagccctaatgggtactggactttttaggatcgggttaaaaaacc-tattaaaattcgagc 46817138  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaac 189  Q
    | ||||||| ||| |||||||||||| ||| ||| |||||||    
46817139 tcaatatttaaggcccaaaccctataattaatcgagctaaac 46817180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 49112335 - 49112476
Alignment:
50 tatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattc-gggct 148  Q
    |||||||||||||| | ||| |||||||||||||||||||| |||| |||||||| |||||| |||| |||||| |||| |||| | ||||||| ||| |    
49112335 tatgcgggctaacgagatactcgcggcccgttcgggctagctctaacgggtaccgaactttttagggtcgggct-aaaagccctgtaaaaattcggggat 49112433  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    ||||| || ||| ||||  |||||| ||| |||||||||||||    
49112434 taatacttaaggcccaagacctataattaatcgggctaaacgg 49112476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 23108684 - 23108543
Alignment:
51 atgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctta 150  Q
    ||||||||||||| ||||||  || ||||||||| |||||| ||| || |||| ||||||| ||| ||||||| ||||| ||||||||||||| |||| |    
23108684 atgcgggctaacgtgctacctacgacccgttcggactagccataacggataccagactttttaggaccgggctaaaaaatcctattaaaattccggctga 23108585  T
151 atattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    |||||| ||| | || ||||||| ||| | || |||||||||    
23108584 atatttaaggcctaagccctataattaattggactaaacggg 23108543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 40683489 - 40683542
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggta 101  Q
    ||||| |||||||||||||||||||||| || |||||||||||||||| |||||    
40683489 gttatacgggctaacgggctacccgcgggccattcgggctagccctaacgggta 40683542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 18834231 - 18834339
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||| || |||||| |||||| |||| |||| ||||||||||||||   || ||||||| ||   ||| ||||||| ||| |||    
18834231 cgggctagccctaacgggtagcgaactttttagggccaggctaaaaagccctattaaaattcaaactcaatatttaagactcaagccctataattaatcg 18834330  T
182 ggctaaacg 190  Q
    |||||||||    
18834331 ggctaaacg 18834339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 48949603 - 48949655
Alignment:
140 attcgggcttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||    
48949603 attcgggctcaatattttaggcccaagccctatatttattcgggctgaacggg 48949655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 48949549 - 48949602
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagg 115  Q
    ||||||||||||||||| || |||||||||||||  |||||||| |||||||||    
48949549 cgggctacccgcggcccatttgggctagccctaacaggtaccgggcttttaagg 48949602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 10013252 - 10013386
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||| ||| | | |||  | ||||||||||| || ||||||||  ||||| |||| |||||| |||| |||||| |||||  ||||    
10013252 gttatgcgggctaacgggttactcactgccaatacgggctagcccaaacgggtaccgtgctttttaggg-cgggctaaaaagccctataaaaatcagggc 10013350  T
148 ttaatattttaggtccaaaccctatatttattcggg 183  Q
    | ||||||| ||| |||| || |||| ||| |||||    
10013351 tcaatatttaaggcccaagccgtatagttaatcggg 10013386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 40921631 - 40921678
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaa 95  Q
    ||||||||||||| |||||||||| | |||||||| ||||||||||||    
40921631 gttatgcgggctagcgggctaccctcagcccgttcaggctagccctaa 40921678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 36643446 - 36643394
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaacccta 134  Q
    |||||||||||||| ||||||||| ||||| ||||||||| | |||| |||||    
36643446 cgggctagccctaacgggtaccgggctttttagggccggggtaaaaagcccta 36643394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 3e-71; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 41933421 - 41933241
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
41933421 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctgaaaagccctattaaaattcgggc 41933322  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || |||||||||||||||||||    
41933321 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacggcccggcccgttttgacagctcta 41933241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 7910131 - 7910311
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
7910131 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 7910230  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || |||||||||||||||||||    
7910231 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 7910311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 48 - 232
Target Start/End: Complemental strand, 1695122 - 1694938
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||    
1695122 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaaagggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggc 1695023  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacctg 232  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| | | ||||| |  || |||||||||||||||||||||||    
1695022 tcaatattttaggcccaagccctatatttattcgggctaaacgggccagcccatacgagccggcccgttttgacagctctacctg 1694938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 26898362 - 26898218
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
26898362 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggc 26898263  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||  |||||||||||||||||||||||||||||||    
26898262 tcaatattttagacccaaaccctatatttattcgggctaaacggg 26898218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 9301033 - 9301181
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||||| |||    
9301033 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattccggc 9301132  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcgg 196  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||||||    
9301133 tcaatattttaggcccaagccctatatttattcgggctaaacgggtcgg 9301181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 55423860 - 55423716
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
55423860 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggc 55423761  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
55423760 tcaatattttaggcccaagccctatatttattcgggctaaacggg 55423716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 26823162 - 26823011
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
26823162 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 26823063  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtcc 199  Q
    | ||||||||||  ||||||||||||||||||||||||||||||| ||||||    
26823062 tcaatattttagacccaaaccctatatttattcgggctaaacgggccggtcc 26823011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 31412107 - 31412287
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||  |||||||||||||||| |||| ||||||||||||||||||    
31412107 gttatgcgggctaacgggctacccgtggccc-ttcgggctagccctaatgggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggc 31412205  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||  | ||| || || ||||||||||||||||||||    
31412206 tcaatattttaggcccaagccctatatttattcgggctaaacgggccgccctatacgggccggcccgttttgacagctctac 31412287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 56 - 229
Target Start/End: Complemental strand, 33911791 - 33911618
Alignment:
56 ggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatatt 155  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||    
33911791 ggctaacgggctacccgcggcccattcggactagccctaacgggtaccggacttttaagggccgggctaaaaagtcctattaaaattcgggctcaatatt 33911692  T
156 ttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    ||||| | || |||||||||||||||||||||||||  ||| ||||| || || ||||||||||||||||||||    
33911691 ttaggcctaagccctatatttattcgggctaaacggaccggcccatacgggccggcccgttttgacagctctac 33911618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 48 - 230
Target Start/End: Original strand, 54313318 - 54313500
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
54313318 gttatgcgggctaacgggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccctattaaaattcgggc 54313417  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    | ||||||| ||| |||| ||||||| ||| ||||||||||||||  || || || || || |||||||||||||||||||||    
54313418 tcaatatttaaggcccaagccctataattaatcgggctaaacgggctggcccgtaaggcccggcccgttttgacagctctacc 54313500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 1842682 - 1842538
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| || |||||||||||||||    
1842682 gttatgcgggctaacgggctacccgcgacccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccatattaaaattcgggc 1842583  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||  |||||||||||||||||||||||||||||||    
1842582 tcaatattttagacccaaaccctatatttattcgggctaaacggg 1842538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 43088113 - 43087933
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||| ||||    
43088113 gttatgcggactaacgggctacctgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaatttgggc 43088014  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||||||||||||||||| |||||||||| | ||| |||||    ||  ||||||||||||||||||    
43088013 tcaatattttaggcccaaaccctatatttatttgggctaaacgagccggcccatacaacccgacccgttttgacagctcta 43087933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 39095227 - 39095406
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||| | |||| | |||||||||||||||||    
39095227 ttatgcgggctaacgggctacccgcggtccgttcgggctagccctaacgggtaccgggtttttaagggccgggttaaaaagctctattaaaattcgggct 39095326  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
     ||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||| |  || | |||||||||||||||||    
39095327 caatattttaggcccaaaccctatattttttcgggctaaacgggccggcctatacgacccagtccgttttgacagctcta 39095406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 3995172 - 3994990
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||||||| |||| ||||||||||||||||||    
3995172 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggc 3995073  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    | ||||||| ||| | || ||||||||||| |||||||||| ||| ||| ||||| || || |||||||||||||||||||||    
3995072 tcaatatttaaggcctaagccctatatttaatcgggctaaatgggccggcccatacggcccggcccgttttgacagctctacc 3994990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 10804509 - 10804653
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||| |||||| || ||||||||||||||||| |||| ||||||||||||||||||    
10804509 gttatgcgggctaacgggctacccgtggctcattcgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggc 10804608  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||| ||||||||||||||||||||||||    
10804609 tcaatattttaggcccaaactctatatttattcgggctaaacggg 10804653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 50155517 - 50155661
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||| |||| ||||||||||||| ||||    
50155517 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaatttgggc 50155616  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||  |||| ||||||||||||||||||||||||||    
50155617 tcaatattttagacccaagccctatatttattcgggctaaacggg 50155661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 48 - 230
Target Start/End: Original strand, 3974705 - 3974887
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||  |||| ||||||||||| |||| ||||||||||||||||||    
3974705 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagcgggatttttagggccgggctaaaaagccctattaaaattcgggc 3974804  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    | ||||||| ||| | || ||||||||||| |||||||||| ||| ||| ||||| || || |||||||||||||||||||||    
3974805 tcaatatttaaggcctaagccctatatttaatcgggctaaatgggccggcccatacggcccggcccgttttgacagctctacc 3974887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 17525302 - 17525473
Alignment:
57 gctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattt 156  Q
    |||||||||||||||||||||| |||||||||||||| | || |||||| |||||||| |||||||| |||| ||||||||||||||||||| |||||||    
17525302 gctaacgggctacccgcggcccattcgggctagccctgacggataccgggcttttaagagccgggctaaaaagccctattaaaattcgggctcaatattt 17525401  T
157 taggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    |||  |||| |||||||||||||| ||||||||||| ||||||||| || || || |||||||||||||||||    
17525402 tagacccaagccctatatttattc-ggctaaacgggccggtccatacgggccggcacgttttgacagctctac 17525473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 14741005 - 14741137
Alignment:
64 ggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtcc 163  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||| |||| ||||||||||||||||||| ||||||||||| ||    
14741005 ggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggtagggctaaaaagccctattaaaattcgggctcaatattttaggccc 14741104  T
164 aaaccctatatttattcgggctaaacgggtcgg 196  Q
    |||||||||||||||| ||| ||||||||||||    
14741105 aaaccctatatttatttgggttaaacgggtcgg 14741137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 32774414 - 32774594
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
32774414 gttatgtgggctaacgggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccctattaaaattcgggc 32774513  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| ||||  |||||| ||| |||||||||||||| ||| || || |  ||  ||||||||||||||||||    
32774514 tcaatatttaaggcccaagtcctataattaatcgggctaaacgggccggcccgtaagacccgacccgttttgacagctcta 32774594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 41879387 - 41879531
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||| |||| |||||||||| ||||| |    
41879387 gttatgtgggctaacgggctacccgcggccctttcgggctagccctaacgggtaccagactttttagggccgggctaaaaagccctattaaatttcggac 41879486  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| |||||||||||||||| ||| ||||||||||||||    
41879487 tcaatatttaaggtccaaaccctataattaatcgggctaaacggg 41879531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 29522785 - 29522952
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||| |||| |||||||||||||||| || ||||||| |||     
29522785 cgggctaccctcggcctgttcgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcggactcaatatttaaggc 29522884  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    |||||||||||| ||| |||||||||||||| ||| ||||| || || ||||||||||||||||||||    
29522885 ccaaaccctataattaatcgggctaaacgggccggcccatagggcccggcccgttttgacagctctac 29522952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 33215521 - 33215392
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||      
33215521 cgggctacccgcggcccattcgggctagccctaacaggtaccgaacttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttagac 33215422  T
162 ccaaaccctatatttattcgggctaaacgg 191  Q
    ||||||||||||||||||| ||||||||||    
33215421 ccaaaccctatatttattccggctaaacgg 33215392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 49318447 - 49318267
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||| |||| ||||||||||||| ||||||||| ||||| |||  |||  ||||||||| | |||||||||||||||||||||||    
49318447 gttatgcgggctagcgggcaaccctcggcccgttcgggttagccctaacgggtagcgggttttatagggccgggttaaaaaaccctattaaaattcgggc 49318348  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||||||| |||||||||||||| ||| ||||| || ||  ||||||||||||||||||    
49318347 tcaatatttaaggcccaagccctatatttaatcgggctaaacgggccggcccatacggcccgacccgttttgacagctcta 49318267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 51744252 - 51744103
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaa-accctattaaaattcggg 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||| ||||||||||| |||| ||||||||||||||||||    
51744252 gttatgcgggctaacgggctacccgcagcccgttcgggctagccctaatgggtaccgagctttttagggccgggctaaaaagaccctattaaaattcggg 51744153  T
147 cttaatattttaggtccaaaccctatatttattcgggctaaacgggtcgg 196  Q
     | || |||| ||| |||||||||||| ||| ||||| ||||||||||||    
51744152 ttcaacatttaaggcccaaaccctataattaatcgggttaaacgggtcgg 51744103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 51885297 - 51885426
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||| |||     
51885297 cgggctaccctcggcccgttcgggctagccctaacgggtagcggactttttagggccgggctaaaaagccctattaaaattcgggctcaatatttaaggc 51885396  T
162 ccaaaccctatatttattcgggctaaacgg 191  Q
    |||| ||||||||||| |||||||||||||    
51885397 ccaagccctatatttaatcgggctaaacgg 51885426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 7399832 - 7399701
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtac-cggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttagg 160  Q
    ||||||||||||||||| |||||||||||||||| ||| |  ||| ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
7399832 cgggctacccgcggcccattcgggctagccctaacggggaatcgggcttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttagg 7399733  T
161 tccaaaccctatatttattcgggctaaacggg 192  Q
     |||| ||||||||||||||||||||||||||    
7399732 cccaagccctatatttattcgggctaaacggg 7399701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 42480988 - 42481131
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||| ||||| ||||||||||| |||| |||||||||||| |||||    
42480988 gttatgcgggctaacgggctacccgcggcccgttcgagctagctctaacgggtatcgggctttttagggccgggctaaaaagccctattaaaatccgggc 42481087  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||    
42481088 tcaatatttaaggcccaagccctataattaatcgggctaaacgg 42481131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 1460258 - 1460438
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||| |||| || |||||||||| ||||||||||||||||||||||| || || ||| ||||| ||||||||||| |||| | ||||||||||||||||    
1460258 gttattcgggatagcgggctaccctcggcccgttcgggctagccctaacggatagcgggctttttagggccgggctaaaaagctctattaaaattcgggc 1460357  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||||||| || | ||||||||| ||| ||||| || || | |||||||||||||||||    
1460358 tcaatatttaaggcccaagccctatatttaatcagactaaacgggccggcccatacggcccggtccgttttgacagctcta 1460438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 10267949 - 10267812
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| || | |||||||||||||||    
10267949 cgggctagccctaacgggtaacgggcttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttaggcccgagccctatatttattcg 10267850  T
182 ggctaaacgggtcggtccatatggtcctgcccgttttg 219  Q
    ||||||||||| ||| ||||| || || |||| |||||    
10267849 ggctaaacgggccggcccatacggcccagcccattttg 10267812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 24570405 - 24570265
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||| |||| || ||||||| |||||||||||||||    
24570405 gttatgcggactagcgggctaccctcggcccgttcgggctagccctaacgggtagcggactttttaggaccggactaaaaaaccttattaaaattcgggc 24570306  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | | ||||| ||| |||||||||||||||| ||||| ||||    
24570305 tcattatttaaggcccaaaccctatatttaatcgggttaaa 24570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 12768730 - 12768564
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||| |||||||||||||||||||| || |||||| ||||| |||||| |||| |||| ||||||||||||||||||| ||||||| | |     
12768730 cgggctacccgcgacccgttcgggctagccctaacggataccgggctttttagggccaggctaaaaagccctattaaaattcgggctcaatatttaaagc 12768631  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||| ||||||| ||| ||||| |||||||| ||| || || || || |||||||||| ||||||||    
12768630 ccaagccctataattaatcgggttaaacgggccggcccgtaaggcccggcccgttttgccagctcta 12768564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 15489190 - 15489084
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||||| |||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
15489190 cgggctagccctaacgggtaccagacttttaagggtcgggctaaaaagccctattaaaattcgggctcaatattttaggcccaagccctatatttattcg 15489091  T
182 ggctaaa 188  Q
    |||||||    
15489090 ggctaaa 15489084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 1557332 - 1557471
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| |||||| |||||||| || ||||| ||||||||||||||  |    
1557332 gttatgcgggctaacgggctatccgcggcc-gttcgagctagccctaaggggtaccgaactttttagggccggactaaaaaatcctattaaaattcgatc 1557430  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    ||||||||| ||  |||||||||||| ||| ||||||||||    
1557431 ttaatatttaagacccaaaccctataattaatcgggctaaa 1557471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 35603810 - 35603966
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    ||||| ||| ||||| | || |||||| |||| |||||||||||||| |||    
35603810 gttatgcgggctagcgggctaccctcggcccgttcgggctagcccgttcgggtagcgggctttttaaggtcgggctaaaaacccctattaaaattccggc 35603909  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatg 204  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||||||| |||||||    
35603910 tcaatatttaaggcccaagccctataattaatcgggctaaacgggtcgggccatatg 35603966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 36638241 - 36638061
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||| ||| | | |  |||| |||||| |||| |||| ||||||||||||||||||    
36638241 gttatgcaggctagcgggctaccctcggcccgttcgggctagccctaacgggcagcaggttttttagggccaggctaaaaagccctattaaaattcgggc 36638142  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||  ||||||||||| ||||||||||||||  || ||||| || ||  || |||||||||||||||    
36638141 tcaatatttaaggcccaggccctatatttaatcgggctaaacgggctggcccatacggcccgacctgttttgacagctcta 36638061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 44845231 - 44845370
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| ||| | |  |||||||| ||||  ||||||||||||||||||    
44845231 ttatgcgagctaacgggctacctgcagcccgttcgggctagccctaacgggtaccgggcttcttaaagccgggctaaaaagtcctattaaaattcgggct 44845330  T
149 taatattttaggtccaaaccctatatttattcgggctaaa 188  Q
     ||||||| |   |||||||||||| ||| ||||||||||    
44845331 caatatttaaaacccaaaccctataattaatcgggctaaa 44845370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 74 - 229
Target Start/End: Complemental strand, 28970683 - 28970527
Alignment:
74 ggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctata 173  Q
    ||||||||| | |||||||||| ||||||||| ||||| ||| ||||| | |||| || |||||||||||||||| ||||||| ||| |||| |||||||    
28970683 ggcccgttcagactagccctaacgggtaccgggcttttcaggaccggggtaaaaagccttattaaaattcgggctcaatatttaaggcccaagccctata 28970584  T
174 tttattcgggctaaacgggtc-ggtccatatggtcctgcccgttttgacagctctac 229  Q
      || |||||||||||||| | || |||||||| ||  |||||||||||||||||||    
28970583 aataatcgggctaaacgggccgggcccatatggcccgacccgttttgacagctctac 28970527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 41209396 - 41209537
Alignment:
86 ctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggct 185  Q
    |||||||||| ||||||||||||||| |||| |||||| |||| ||||||||||||||||||| ||||||| | | ||||| |||||| ||| ||||| |    
41209396 ctagccctaacgggtaccggactttttagggtcgggctaaaaagccctattaaaattcgggctcaatatttaaagcccaaa-cctataattaatcgggtt 41209494  T
186 aaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||||||  ||||| || |  || |||||||||||||||||||    
41209495 aaacgggctggtccgtacgacccggcccgttttgacagctcta 41209537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 39620602 - 39620438
Alignment:
64 ggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtcc 163  Q
    ||||||||| |||  ||||||||||||| ||| || |||||  ||||| ||||||||||| |||| ||| ||||||||| ||||| ||||||| ||| ||    
39620602 ggctacccgtggcttgttcgggctagccttaacggataccgagctttttagggccgggctaaaaagccccattaaaatttgggctcaatatttaaggccc 39620503  T
164 aaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    || ||||||| ||| | |||||||||||| ||| ||||| || ||  ||||||||||||| ||||    
39620502 aagccctataattaattgggctaaacgggccggcccatacggcccgtcccgttttgacagttcta 39620438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 44310395 - 44310251
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||| |||||| ||||||||||||| ||||||||| || || | | ||||| ||||  ||||| |||| ||||||||||||||||||    
44310395 gttatgcgggctagcggactaccctcggcccgttcgggttagccctaacggatagcaggctttttagggttgggctaaaaagccctattaaaattcgggc 44310296  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| |||  ||| ||||||| ||| ||| ||||||||||    
44310295 tcaatatttaaggcacaagccctataattaatcgagctaaacggg 44310251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 28816103 - 28816170
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaaggg 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
28816103 ttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaaggg 28816170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 53468209 - 53468080
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| || |||||||||||||||| ||| |||| |||  ||||| |||| |||||| |||| ||||||||||||||| ||||||||||| |||     
53468209 cgggctacccccg-cccgttcgggctagccataacgggttccgtgctttttagggtcgggctaaaaagccctattaaaattcgtgcttaatatttaaggc 53468111  T
162 ccaaaccctatatttattcgggctaaacggg 192  Q
    |||| ||||||| ||| ||||| ||||||||    
53468110 ccaagccctataattaatcgggttaaacggg 53468080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 49506211 - 49506100
Alignment:
115 ggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccg 214  Q
    |||||| || |||| |||||||||||||| |||| ||||||| ||| |||||||||||| ||| |||||||||||||| |||||||||  | ||  ||||    
49506211 ggccggactaaaaagccctattaaaattcaggctcaatatttaaggcccaaaccctataattaatcgggctaaacgggccggtccatacagcccgacccg 49506112  T
215 ttttgacagctc 226  Q
    ||||||||||||    
49506111 ttttgacagctc 49506100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 15646479 - 15646536
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccgg 105  Q
    |||||||||||||||||| |||||||||||| | |||||||||||||| |||||||||    
15646479 gttatgcgggctaacgggatacccgcggcccatgcgggctagccctaacgggtaccgg 15646536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 27182399 - 27182441
Alignment:
150 aatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
27182399 aatattttaggcccaagccctatatttattcgggctaaacggg 27182441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 30105825 - 30105867
Alignment:
150 aatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
30105825 aatattttaggcccaagccctatatttattcgggctaaacggg 30105867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 5115049 - 5114866
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
5115049 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 5114950  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacct 231  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || ||||||||||||||||| ||||    
5114949 ttaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgacagctcaacct 5114866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 40601710 - 40601891
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| | ||||||||||||||||    
40601710 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagctctattaaaattcgggc 40601809  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||||||||||||||||||||| |||||||| ||| ||||| || || ||||||||||||||||||||    
40601810 tcaatattttaggcccaaaccctatatttattcgggttaaacgggccggcccatacgggccggcccgttttgacagctctac 40601891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 44372860 - 44373041
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||||||| |||    
44372860 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacggataccggacttttaagggccgggctaaaaagccctattaaaattcaggc 44372959  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||||    
44372960 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatatgggccggtccgttttgacagctctac 44373041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 48812516 - 48812697
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||| |||| ||||||||||||||||||    
48812516 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggc 48812615  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || ||||||||||||||||||||    
48812616 tcaatattttaggcccaagccctatatttattcgggctaaacgggacggcccatacgggccggcccgttttgacagctctac 48812697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 30723444 - 30723300
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
30723444 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggc 30723345  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
30723344 tcaatattttaggcccaagccctatatttattcgggctaaacggg 30723300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 19406790 - 19406610
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
19406790 gttatgcgggctaacgggctacccgcggcccattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 19406691  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || |||| |||||||| |||||    
19406690 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggcccattttgacaactcta 19406610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 39995436 - 39995616
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||| ||    
39995436 gttatgcgggctaacgggctactcgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgagc 39995535  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| ||||||||||||||||||||||||||||||  ||| |||||  | ||  ||||||||||||||||||    
39995536 tcaatattttaggcccaaaccctatatttattcgggctaaacggaccggcccatacagaccgacccgttttgacagctcta 39995616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 41310505 - 41310649
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||| |||| ||||||||||||||||||    
41310505 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtgccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 41310604  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
41310605 tcaatattttaggcccaagccctatatttattcgggctaaacggg 41310649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 62 - 229
Target Start/End: Complemental strand, 28199347 - 28199180
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||     
28199347 cgggctacccgcggcccattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattcaaattcgggctcaatattttaggc 28199248  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    ||||||||||||||||||||||||||||||| ||| |||||  | || ||||||||||||||||||||    
28199247 ccaaaccctatatttattcgggctaaacgggccggcccatacaggccggcccgttttgacagctctac 28199180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 1858752 - 1858895
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
1858752 gttatgcgggctaacgggctacccgcgtcccattcgggccagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 1858851  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||||||| |||| |||||||||||||||||||||||||    
1858852 tcaatattttaggcccaagccctatatttattcgggctaaacgg 1858895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 700051 - 699871
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| |||| |||||| |||| ||||||||||||| ||||    
700051 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagcgggctttttagggtcgggctaaaaagccctattaaaatttgggc 699952  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||||||| ||||| || || | |||||||||||||||||    
699951 tcaatatttaaggcccaagccctataattaatcgggctaaacgggtcggcccatacggcccggtccgttttgacagctcta 699871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 48913724 - 48913581
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||    
48913724 gttatgcgggccaacgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcaggc 48913625  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||||||  |||| ||||||||||||||||  |||||||    
48913624 tcaatattttagacccaagccctatatttattcggattaaacgg 48913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 44922335 - 44922154
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||||||| |||| ||||||||||||||||||    
44922335 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggc 44922236  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||| ||| |||| || |||| ||| | ||||||||||||  || ||||| || || ||||||||||||||||||||    
44922235 tcaatatttaaggcccaagccttataattaattgggctaaacgggctggcccatacggcccggcccgttttgacagctctac 44922154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 35985469 - 35985613
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||||||||| |||| |||||||||||||||| |    
35985469 gttatgcgggctaacgggctacccgcggcccgttcgggttagccctaatgggtaccgggctttttagggccgggctaaaaagccctattaaaattcggac 35985568  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| ||| |||| ||||||| ||| ||||||||||||||    
35985569 tcaatatttaaggcccaagccctataattaatcgggctaaacggg 35985613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 50511957 - 50512137
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||| ||||| ||| ||||| ||||||||||| |||| ||||||||||||||||||    
50511957 gttatgcgggctagcgggctacccttggcccgttcgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggc 50512056  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||| ||| ||| ||||| || || |||| ||||||||||||||    
50512057 tcaatatttaaggaccaagccctataattaatcgggctaaatgggccggcccatacggcccggcccattttgacagctcta 50512137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 233
Target Start/End: Original strand, 33814903 - 33815087
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||| |||||| |||| ||| |||||||||||||     
33814903 gttatgcgggctaacgggctaccctcggcccgttcgggctagccctaacgggtagcggactttttagggtcgggctaaaaagccccattaaaattcgggt 33815002  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacctgc 233  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||  ||| ||||| || |  ||||||||||||||||||| ||||    
33815003 tcaatatttaagg-ccaagccctataattaatcgggctaaacggaccggcccatacggcctggcccgttttgacagctctagctgc 33815087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 233
Target Start/End: Original strand, 33874373 - 33874557
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||| |||||| |||| ||| |||||||||||||     
33874373 gttatgcgggctaacgggctaccctcggcccgttcgggctagccctaacgggtagcggactttttagggtcgggctaaaaagccccattaaaattcgggt 33874472  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacctgc 233  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||  ||| ||||| || |  ||||||||||||||||||| ||||    
33874473 tcaatatttaagg-ccaagccctataattaatcgggctaaacggaccggcccatacggcctggcccgttttgacagctctagctgc 33874557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 42102308 - 42102156
Alignment:
73 cggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctat 172  Q
    |||||||||||| |||||||||| ||||||||  ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||  |||||||||||    
42102308 cggcccgttcgg-ctagccctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttagacccaaaccctat 42102210  T
173 atttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctc 226  Q
    ||||||||||||||||||||  || ||||| || || |||||||||||||||||    
42102209 atttattcgggctaaacgggctggcccatacggcccggcccgttttgacagctc 42102156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 47034514 - 47034643
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||      
47034514 cgggctacccgcggcccattcgggctagccctaacaggtaccgaacttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttagac 47034613  T
162 ccaaaccctatatttattcgggctaaacgg 191  Q
    ||||||||||||||||||| ||||||||||    
47034614 ccaaaccctatatttattccggctaaacgg 47034643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 40412495 - 40412675
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||| | |||||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||||| | |||| ||||||||||||||||||    
40412495 gttatgcaggctagcaggctaccctcggcccgttcgggctagccctaacgggtagcgggctttttagggccgggttaaaaagccctattaaaattcgggc 40412594  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| || |||| ||| |||||||||||||| ||| | ||| || || |||||||||||||||||||    
40412595 tcaatatttaaggcccaagccttataattaatcgggctaaacgggccggccaatacggcccggcccgttttgacagctcta 40412675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 38235764 - 38235638
Alignment:
65 gctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtcca 164  Q
    ||||||||||| || ||||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||    ||    
38235764 gctacccgcggtccattcggactagccctaacgggtaccggacttttaagggtcgggctaaaaaaccctattaaaattcgggctcaatattttaaactca 38235665  T
165 aaccctatatttattcgggctaaacgg 191  Q
    | |||||||||||||||||||||||||    
38235664 agccctatatttattcgggctaaacgg 38235638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 52929451 - 52929571
Alignment:
108 ttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtc 207  Q
    ||||| |||||||||| |||| ||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||||||| | |||| ||||    
52929451 ttttacgggccgggctaaaaatccctattaaaatttgggctcaatattttagacccaaaccctatatttattcgggctaaacgggtcgattcatacggtc 52929550  T
208 ctgcccgttttgacagctcta 228  Q
    | |||||||||||||||||||    
52929551 cggcccgttttgacagctcta 52929571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 45826797 - 45826663
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||| |||| ||||||||||||||||||| ||||||| ||      
45826797 cgggctacccgcggcccgttcgggctagtcctaacgggtaccggactttttaggaccgggctaaaaagccctattaaaattcgggctcaatatttaagac 45826698  T
162 ccaaaccctatatttattcgggctaaacgggtcgg 196  Q
    ||||  | |||| ||| ||||||||||||||||||    
45826697 ccaagtcatataattaatcgggctaaacgggtcgg 45826663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 23974159 - 23974338
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||||||||||||||||  |||||| ||| ||||||||  ||||||||  |||||| |||||||||| |||| ||||||||| ||||||||    
23974159 gttatgctggctaacgggctacccgcaacccgtttgggttagccctac-gggtaccgagcttttatgggccgggctaaaaagccctattaacattcgggc 23974257  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||   ||||||||||||||||||| |||||||||| ||  ||||| || || ||| ||||| |||||||||    
23974258 tcaatattttagacacaaaccctatatttattcgagctaaacgggccgacccatacggcccggcctgttttaacagctcta 23974338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 25423271 - 25423407
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| |||||||||||||||   |||||||||||||||||||||| ||||||||| ||||| | |||| |||| |||| ||||||||||||||||||    
25423271 gttatgcaggctaacgggctaccgatggcccgttcgggctagccctaacgggtaccgggctttttaaggccaggctaaaaagccctattaaaattcgggc 25423370  T
148 ttaatattttaggtccaaaccctatatttattcgggc 184  Q
    ||||||||| ||| |||||| ||||| ||| ||||||    
25423371 ttaatatttaaggcccaaactctataattaatcgggc 25423407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 62 - 229
Target Start/End: Complemental strand, 48940937 - 48940765
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| ||||||||||||||||||||||| |||||  || ||||| |||| |||||| |||| ||||||||||||||||||| ||||||| |||     
48940937 cgggctaccctcggcccgttcgggctagccctaacgggtagtgggctttttagggtcgggctaaaaagccctattaaaattcgggctcaatatttaaggc 48940838  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccata-----tggtcctgcccgttttgacagctctac 229  Q
    |||| ||||||| ||| |||||||||||||| |||  ||||      ||||| ||||||||||||||||||||    
48940837 ccaagccctataattaatcgggctaaacgggccggctcatagggtccggtccggcccgttttgacagctctac 48940765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 49 - 191
Target Start/End: Original strand, 48605821 - 48605962
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| |  |||||||||||| | ||||||||| ||||  ||||||||||||||||||    
48605821 ttatgcgggctaacgggctatccgcggcccgttcggactagccctaacga-taccggactttttaaggccgggctaaaaagtcctattaaaattcgggct 48605919  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
     ||||||| ||| |||||||||||| ||| ||||  |||||||    
48605920 caatatttaaggcccaaaccctataattaatcggaataaacgg 48605962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 20722319 - 20722202
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||| | ||||||||| |||| ||||||||||||||||||| ||||||| |||     
20722319 cgggctacccgcggcccgttcgggctagccctaacgggtaccaggctttttaaggccgggctaaaaagccctattaaaattcgggctcaatatttaaggc 20722220  T
162 ccaaaccctatatttatt 179  Q
    | |||||||||| |||||    
20722219 ctaaaccctataattatt 20722202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 21088508 - 21088633
Alignment:
50 tatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctt 149  Q
    |||| ||||||||||| ||||||||| || |||||||||||||||| ||||||||| ||||||| ||||||||| ||||  ||| ||||||||||||||     
21088508 tatgtgggctaacgggttacccgcggtccattcgggctagccctaacgggtaccgggcttttaaaggccgggctaaaaaggcctgttaaaattcgggctc 21088607  T
150 aatattttaggtccaaaccctatatt 175  Q
    ||||||||| | ||||||||||||||    
21088608 aatattttaagcccaaaccctatatt 21088633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 45794063 - 45794240
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||     |||| |||||||| || |||||||||||||||||||| ||    
45794063 gttatgctggctaacgggctacccgcggcccgttcgggctagccctaacgggtac----atttttagggccggactaaaaaaccctattaaaattcgagc 45794158  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||| |||  ||| ||||||| ||| ||| |||||||||| | | || || || ||  |||||||||| ||||||||    
45794159 tcaatatttaaggctcaagccctataattaatcgagctaaacgggccagcccgtaaggcccgacccgttttgatagctctac 45794240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 39003133 - 39003048
Alignment:
106 acttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    |||||||||| ||||||| |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
39003133 acttttaaggaccgggctaaaaagccctattaaaattcgggctcaatattttaggcccaagccctatatttattcgggctaaacgg 39003048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 343113 - 343242
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||               ||||| | |||| |||||||||||| |||||    
343113 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggta---------------ccgggttaaaaagccctattaaaatacgggc 343197  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
343198 tcaatattttaggcccaagccctatatttattcgggctaaacggg 343242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 21720051 - 21719945
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||| |||||||||| ||||| |||| |||||||||||| ||||| ||| ||||| ||| ||||||| |||| |||||||||||||| |||    
21720051 gttatgcaggctagcgggctaccctcggcctgttcaggctagccctaacgggtagcgggctttttaggaccgggctaaaaatccctattaaaattccggc 21719952  T
148 ttaatat 154  Q
    | |||||    
21719951 tcaatat 21719945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 46868821 - 46868747
Alignment:
118 cgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    |||||| |||| || |||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||    
46868821 cgggctaaaaagccttattaaaattcgggctcaatattttaggcccaaaccctatatttatttgggttaaacggg 46868747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 25155837 - 25155740
Alignment:
63 gggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttagg 160  Q
    ||||||||||||||||||| ||| ||||||||| | ||| ||| ||||||| || ||||||  ||| |||||||||||||| |||| |||||||||||    
25155837 gggctacccgcggcccgtttgggttagccctaacgagtatcgggcttttaaaggtcgggctacaaagccctattaaaattcaggctcaatattttagg 25155740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 27414139 - 27414061
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttagg 160  Q
    |||||||||||||| || ||||||  ||||||||||||||||  |||||||||||||||||  |||| |||||||||||    
27414139 cgggctagccctaatggataccgggtttttaagggccgggctacaaaaccctattaaaatttaggctcaatattttagg 27414061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 6715105 - 6715284
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||| |||||||| |||||||||  ||||| |||||  |||||||||| | ||| | | ||||| || ||||| || ||||   |||||||||||| |||    
6715105 gttacgcgggctagcgggctaccttcggcctgttcgaactagccctaacgagtagctggctttttagagccggactaaaaacatctattaaaattcaggc 6715204  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||||||||| |||||| ||| |||||||||||||  || |||||  || ||||||  |||||||| |||||    
6715205 tcaatatttaaggtccaaa-cctataattaatcgggctaaacggaccgatccatccggccctgccaattttgacaactcta 6715284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 12255175 - 12255347
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||| ||||| | |||||| ||| || ||||||||||||||||| ||||||||| ||||| ||||||||| | |||| |||        |||||||    
12255175 gttatgcgcgctaatgagctacctgcgacctgttcgggctagccctaatgggtaccgggctttttagggccgggttaaaaagccc--------ttcgggc 12255266  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||||||||  |||||| ||| ||| | |||||||| | | || || || || ||||||||||||| |||||    
12255267 tcaatatttaaggtccaagtcctatacttaatcgaggtaaacgggcccggccgtacggcccggcccgttttgacatctcta 12255347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 50863858 - 50863952
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattt 156  Q
    |||||||| | |||||||||||| |||||||||| ||||| |||| |||| |||||||  || |||| | ||||||||||| ||||| |||||||    
50863858 cgggctactctcggcccgttcggactagccctaacgggtagcggattttttagggccgaactaaaaatctctattaaaatttgggctcaatattt 50863952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 46868876 - 46868829
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaa 95  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||    
46868876 gttatgcgggctaacgggctacccgcagctcattcgggctagccctaa 46868829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 77
Target Start/End: Original strand, 52929413 - 52929442
Alignment:
48 gttatgcgggctaacgggctacccgcggcc 77  Q
    ||||||||||||||||||||||||||||||    
52929413 gttatgcgggctaacgggctacccgcggcc 52929442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 4e-67; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 6266416 - 6266235
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
6266416 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 6266317  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || ||||||||||||||||||||    
6266316 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgacagctctac 6266235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 5927223 - 5927042
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
5927223 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 5927124  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||  ||||| || || ||||||||||||||||||||    
5927123 tcaatattttaggcccaagccctatatttattcgggctaaacgggccgacccatacgggccggcccgttttgacagctctac 5927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 24101721 - 24101901
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
24101721 gttatgcgggctaacgggctactcgcggccctttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 24101820  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||| ||||||| ||| ||||| || || |||||||||||||||||||    
24101821 tcaatattttaggcccaagccctatatttattcgggcgaaacgggccggcccatacgggccggcccgttttgacagctcta 24101901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 11202155 - 11202298
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
11202155 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 11202254  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||||||| ||||||||||||||||||||||||||||||    
11202255 tcaatattttaggcccaaaccctatatttattcgggctaaacgg 11202298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 62 - 229
Target Start/End: Complemental strand, 41395942 - 41395775
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||||||||     
41395942 cgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggtcgggctaaaaagccctattaaaattcgggctcaatattttaggc 41395843  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    |||| |||||||||||||||||||| ||| | ||| ||||| ||||| ||||||||||||||||||||    
41395842 ccaagccctatatttattcgggctacacgtgccggcccatacggtccggcccgttttgacagctctac 41395775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 38231701 - 38231881
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
38231701 gttatgcgggctaacgggctacccacagcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 38231800  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||| |||||| || ||| ||||| || || ||||||||||||||||||||    
38231801 tcaatattttaggcccaagccctatatttattcggactaaac-ggccggcccatacgggccggcccgttttgacagctctac 38231881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 26098418 - 26098274
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
26098418 gttatgcgggctaatgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 26098319  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
26098318 tcaatattttaggcccaagccctatatttattcgggctaaacggg 26098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 41827527 - 41827671
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
41827527 gttatgcgggctaacgggctacccgcggcccattcgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 41827626  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
41827627 tcaatattttaggcccaagccctatatttattcgggctaaacggg 41827671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 42935752 - 42935931
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
42935752 ttatgcgggctaacgggctacccacggcccattcgggctagccctaacgggtaccggacttttaagggccgggct-aaaaaacctattaaaattcaggct 42935850  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
     ||||||||||| |||| ||||||||||||||||| ||||||||  | |||||| || || | ||||||||||||||||||    
42935851 caatattttaggcccaagccctatatttattcgggttaaacgggctgatccatacgggccggtccgttttgacagctctac 42935931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 31894922 - 31895087
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||| ||||||     
31894922 cgggctacccgcggcccattcgggttagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggctcaata-tttaggc 31895020  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||| |||||||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||    
31895021 ccaagccctatatttattcgggctaaacgggccggtccgtatgggccggcccgttttgacagctcta 31895087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 40027889 - 40027736
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
40027889 gttatgcgggctaacgggctacccgcggtccattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 40027790  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||    
40027789 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccat 40027736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 37819356 - 37819212
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
37819356 gttatgcgggctaacgggctacccccggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 37819257  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| | || ||||||||||||||||||||||||||    
37819256 tcaatattttaggccgaagccctatatttattcgggctaaacggg 37819212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 28994905 - 28994756
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||  |||||||||||||||| |||| ||||||||||||||||||    
28994905 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccggg-ttttaagggccgggct-aaaagccctattaaaattcgggc 28994808  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtcc 199  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||||||    
28994807 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggtcc 28994756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 48 - 189
Target Start/End: Original strand, 14615550 - 14615691
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||| ||||| ||||||||||||| |||    
14615550 gttatgcgagctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaaaggccgggctaaaaaatcctattaaaattcaggc 14615649  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaac 189  Q
    | ||||||||||| ||||||||||||||||||||||||||||    
14615650 tcaatattttaggcccaaaccctatatttattcgggctaaac 14615691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 7161715 - 7161575
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||| |||| ||||||||||||||||||    
7161715 gttatgcgggctaacggactacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggacgggctaaaaagccctattaaaattcgggc 7161616  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | ||||||||||| |||| ||||||||||||||||||||||    
7161615 tcaatattttaggcccaagccctatatttattcgggctaaa 7161575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 24476356 - 24476500
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| | ||||||||||||||| |||| ||| ||||||||||||||    
24476356 gttatgcgggctaacgggctacctgcggcccattcgggctagccctaacgggtaccgggcatttaagggccgggctaaaaagcccaattaaaattcgggc 24476455  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
24476456 tcaatattttaggcccaagccctatatttattcgggctaaacggg 24476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 15041480 - 15041326
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||||||||||||    
15041480 gttatgcgggctaacgggctatccgcggcccattcgggctagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggc 15041381  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccata 202  Q
    | ||||| ||||| |||| ||||||||||||||||| |||||||| ||| |||||    
15041380 tcaatatcttaggcccaagccctatatttattcgggttaaacgggccggcccata 15041326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 41644150 - 41644294
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||||||||||||||| ||||  |||||||||||||||||    
41644150 gttatgcgggctaacgggctacccgcagcccattcgggttagccctaacgggtaccgggcttttaagggccgggctaaaaaggcctattaaaattcgggc 41644249  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| |||||||||||||||| |||||||||    
41644250 tcaatattttaggcccaagccctatatttattcggactaaacggg 41644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 20823477 - 20823656
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| |||| |||||| |||| ||||| |||||||||||||    
20823477 ttatgcgggctaacgggctacccgcggcccgttcgggctaaccctaacgggtaccgggctttttagggtcgggctaaaaagccctactaaaattcgggct 20823576  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
     ||||||| |||  ||| ||||||| ||| |||||||||||||| ||| ||||| || ||  ||||||||||||||||||    
20823577 caatatttaaggcacaagccctataattaatcgggctaaacgggccggcccatacggcccgacccgttttgacagctcta 20823656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 27639993 - 27640132
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| || |||||| ||||||||||||||||| |||| |||||||||| ||||||||    
27639993 ttatgcgggctaacgggctacccgcggcctattcgggctagccctaacggataccgggcttttaagggccgggctaaaaagccctattaaatttcgggct 27640092  T
149 taatattttaggtccaaaccctatatttattcgggctaaa 188  Q
     ||||||||||| |||| ||||||||||||||||||||||    
27640093 caatattttaggcccaagccctatatttattcgggctaaa 27640132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 21412589 - 21412435
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| ||||| | ||||||||| |||| ||||||||||||||||||    
21412589 gttatgcgggctaacgggctacccgcggcccattcgagttagccctaacgggtaccgggcttttgatggccgggctaaaaagccctattaaaattcgggc 21412490  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccata 202  Q
    | ||||||||||| |||| ||||||||||||||||||||||| || ||| |||||    
21412489 tcaatattttaggcccaagccctatatttattcgggctaaacaggccggcccata 21412435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 21807081 - 21806927
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| ||||| | ||||||||| |||| ||||||||||||||||||    
21807081 gttatgcgggctaacgggctacccgcggcccattcgagttagccctaacgggtaccgggcttttgatggccgggctaaaaagccctattaaaattcgggc 21806982  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccata 202  Q
    | ||||||||||| |||| ||||||||||||||||||||||| || ||| |||||    
21806981 tcaatattttaggcccaagccctatatttattcgggctaaacaggccggcccata 21806927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 7433554 - 7433414
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||| ||||||||| |||| |||| ||||||||||| |||| |||| ||||||||||||||||| |||| ||||||||||||||||||    
7433554 gttatgcgggctaacgagctacccgcagcccattcgagctagccctaacgggtgccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 7433455  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | ||||||||||| |||| ||||||||||||||||||||||    
7433454 tcaatattttaggcccaagccctatatttattcgggctaaa 7433414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 37255569 - 37255698
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| ||| |||| |||| | ||||||||||||||||| |||||||||||     
37255569 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagagccaggctaaaaagctctattaaaattcgggctcaatattttaggc 37255668  T
162 ccaaaccctatatttattcgggctaaacgg 191  Q
     ||| |||||||||||||||||||||||||    
37255669 tcaagccctatatttattcgggctaaacgg 37255698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 44679145 - 44679273
Alignment:
64 ggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtcc 163  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| ||||||||| ||||||| |||| ||||||||||||||||||| ||||||||||| ||    
44679145 ggctacccgcggcccattcaggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccctattaaaattcgggctcaatattttaggccc 44679244  T
164 aaaccctatatttattcgggctaaacggg 192  Q
    ||  ||||||||||||||||||| |||||    
44679245 aagtcctatatttattcgggctatacggg 44679273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 29940068 - 29940247
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||| ||||| ||| ||||| ||||| ||||| |||| |||||||||||||||||||    
29940068 ttatgcgggctagcgggctaccctcggcccgctcgggctagccctaacgggtagcgggctttttagggctgggctaaaaagccctattaaaattcgggct 29940167  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
     ||||||| ||| |||| | ||||| ||| |||||||||||||  ||| ||||| |  ||  ||||||||||||||||||    
29940168 caatatttaaggcccaatctctataattaatcgggctaaacggaccggcccatacgacccgacccgttttgacagctcta 29940247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 356589 - 356409
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| || |  ||| | |||  |||||||||||||||||     
356589 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagcgggctttttagagtagggttaaaatgccctattaaaattcgggt 356490  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||||||| ||||| |||||||| ||| ||||| || ||  ||||||||||||||||||    
356489 tcaatatttaaggcccaagccctatatttaatcgggttaaacgggccggcccatacggcccgacccgttttgacagctcta 356409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 40027534 - 40027706
Alignment:
56 ggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatatt 155  Q
    ||||| ||||||| || |||||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||| |||||||||||||| || | ||||||    
40027534 ggctagcgggctaacctcggcccgttcggactagccctaacgggtaccgggctttttagggccgggctaaaaagccctattaaaattcaggttcaatatt 40027633  T
156 ttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | |||||||| ||||||| ||| ||||| |||||||| | | ||||| || ||  ||||||||||||||||||    
40027634 taaggtccaagccctataattaatcgggttaaacgggccagcccatacggcccgacccgttttgacagctcta 40027706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 49 - 228
Target Start/End: Complemental strand, 7764481 - 7764302
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||| ||||||||||||||||||| ||||||| | |||||||||| || ||| | |||||| |||||| |||| |||| ||||||||||||| |||||    
7764481 ttatgcaggctaacgggctacccgcgtcccgttcagactagccctaacggatactgaactttttagggccaggctaaaaagccctattaaaatttgggct 7764382  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
     ||||||| |||  ||||||||||| ||| ||||||||||||| |||| |||||||| ||  ||  ||||||||||||||    
7764381 caatatttaaggctcaaaccctataattaatcgggctaaacggttcggcccatatggcccgaccaattttgacagctcta 7764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 38894819 - 38894680
Alignment:
89 gccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    ||||||| ||||| ||| ||||| |||| |||||| |||| ||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||    
38894819 gccctaacgggtagcgggctttttagggtcgggctaaaaagccctattaaaattcgggctcaatatttaaggtccaagccctatatttaatcgggctaaa 38894720  T
189 cgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    || | ||| ||||| || || |||||||||||||||||||    
38894719 cgagccggcccatacggcccggcccgttttgacagctcta 38894680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 5913405 - 5913259
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||| ||| ||||| ||||||| ||| |||| |||||||||||||| |||| ||||||  ||| |||| ||||||| ||| |||    
5913405 cgggctagccctaacgggtatcgggctttttagggccgagctaaaaagccctattaaaattcaggctcaatattgaaggcccaagccctataattaatcg 5913306  T
182 ggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    ||||||||||||||| ||||| || || ||| |||||||||||||||    
5913305 ggctaaacgggtcggcccatacggaccggcctgttttgacagctcta 5913259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 32018472 - 32018318
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||| ||||| ||  ||||| ||| ||||||| |||| ||||||||||||| |||     
32018472 gttatgcgggctagcgggctacccttggcccgttcgggctagccctaatgggtagcgagctttttaggaccgggctaaaaagccctattaaaatttggga 32018373  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccata 202  Q
    | ||||||| |||  ||| ||||||| ||| |||||||||||||| ||| |||||    
32018372 tcaatatttaaggctcaagccctataattaatcgggctaaacgggccggcccata 32018318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 43067187 - 43067084
Alignment:
66 ctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaa 165  Q
    ||||||||||||||||||||||||| |||| |||||||||| |||| |||| |||||| |||| ||||||||||||||||||| ||||||| ||  ||||    
43067187 ctacccgcggcccgttcgggctagctctaacgggtaccggattttttagggtcgggctaaaaagccctattaaaattcgggctcaatatttaagacccaa 43067088  T
166 accc 169  Q
    ||||    
43067087 accc 43067084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 5924532 - 5924661
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||| ||||||||||||                |||| |||||||||||||||||     
5924532 gttatgcgggctaatggactacccgcggcccattcgggctagccctaatgggtaccggacta---------------aaaatccctattaaaattcgggt 5924616  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
5924617 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 5924661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 82 - 191
Target Start/End: Original strand, 22487330 - 22487439
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    ||||||| |||||| ||||| ||| ||||| |||||| | || |||||||||||||||||||||||| ||||||| |||||||| ||||||| ||| ||     
22487330 cgggctaaccctaacgggtatcgggctttttagggccagactaaaaaaccctattaaaattcgggctcaatatttaaggtccaagccctataattaatct 22487429  T
182 ggctaaacgg 191  Q
    ||||||||||    
22487430 ggctaaacgg 22487439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 23193019 - 23192839
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||| || ||||||||||||||| | ||||||||||| ||  || ||||| ||||| |||| |||| | |||| || ||| ||||||||| |    
23193019 gttatgcgggctcacaggctacccgcggcccatacgggctagcccaaactggcaccgggctttttagggtcgggttaaaaatccttataaaaattcggtc 23192920  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||   |||| |||||| ||| ||||||| |||| | ||||||||| || | ||||| ||||||||||||||    
23192919 tcaatatttaagtctcaaaacctataattaatcgggcttaacgtgccggtccatacgggcttgccccttttgacagctcta 23192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 957592 - 957506
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||| | ||||||||||||| ||||||| ||||| ||| ||||| ||||||||||| |||| |||||||||||||||||||    
957592 cgggctaccctcagcccgttcgggctggccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggct 957506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 32925404 - 32925502
Alignment:
131 cctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    |||||||||||||| ||| ||||||| ||| |||||||||||| ||| ||| |||||||||| ||||||||| || ||  |||||||||||||||||||    
32925404 cctattaaaattcgagctcaatatttaaggcccaaaccctataattaatcgagctaaacgggccggtccataaggcccgacccgttttgacagctctac 32925502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 18654541 - 18654488
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggta 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
18654541 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggta 18654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 34347019 - 34347114
Alignment:
90 ccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggct 185  Q
    |||||| ||||||||| ||||| |||| |||||| |||| ||||||||||||||||||| ||||||| ||| |||| ||||||| ||| |||||||    
34347019 ccctaacgggtaccgggctttttagggtcgggctaaaaagccctattaaaattcgggctcaatatttaaggcccaagccctataattaatcgggct 34347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 30874177 - 30874246
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggc 117  Q
    ||||||||||||| |||||||||| |||||||||||||||||| |||| ||||| ||| ||||| |||||    
30874177 gttatgcgggctagcgggctaccctcggcccgttcgggctagctctaacgggtagcgggctttttagggc 30874246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 20983839 - 20983887
Alignment:
144 gggcttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||    
20983839 gggctcaatattttaggcccaagccctatatttattcgggctaaacggg 20983887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 2e-66; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 56264379 - 56264559
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
56264379 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 56264478  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || |||||||||||||||||||    
56264479 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 56264559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 401334 - 401514
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||| |||| |||||||||||||||||||    
401334 ttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgagctaaaaagccctattaaaattcgggct 401433  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
     ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || |||  |||||||||||||||    
401434 caatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggcctattttgacagctctac 401514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 6643269 - 6643449
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
6643269 gttatgcgggctaacggaatacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggc 6643368  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| ||||||||||||||||||||||||||||||  ||| ||||| |  || |||| |||||||| |||||    
6643369 tcaatattttaggcccaaaccctatatttattcgggctaaacggaccggcccatacgaaccggcccattttgacaactcta 6643449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 19823619 - 19823799
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || |||| ||||||||||||||| ||    
19823619 gttatgcgggctaacgggttacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccggtctaaaaagccctattaaaattcgtgc 19823718  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||  |||| |||||||||||||||||||||||||| ||| ||||  || || |||||||||||||||||||    
19823719 tcaatattttagacccaagccctatatttattcgggctaaacgggccggcccattcggcccggcccgttttgacagctcta 19823799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 53725007 - 53724827
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||| |||||| || ||||||||||||||||| |||| ||||||||||||||||||    
53725007 gttatgcgggctcacgggctacccgcggcccattcgggctagccctaatgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggc 53724908  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||||||||||| |||||  |  |  ||||||||||||||||||    
53724907 tcaatattttaggcccaagccctatatttattcgggctaaacgggtcggcccatacaggtcgacccgttttgacagctcta 53724827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 49 - 228
Target Start/End: Complemental strand, 53925485 - 53925306
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||    
53925485 ttatgcgggctaacgggctacccatggcccgttcgggctagccctaacgggtaccggatttttaagggccgggctaaaaagccctattaaaattcgggct 53925386  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
     ||||||||||| |||| |||||||||| ||||||||||||||  ||| ||||| || || ||||||||||| |||||||    
53925385 caatattttaggcccaagccctatattttttcgggctaaacggaccggcccatacggcccggcccgttttgatagctcta 53925306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 35392892 - 35392748
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| | ||||  |||||||||||||||||    
35392892 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggttaaaaagtcctattaaaattcgggc 35392793  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
35392792 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 35392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 50097539 - 50097395
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||| ||||||||||| |    
50097539 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccagacttttaagggccgggctaaaaagcccttttaaaattcggac 50097440  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
50097439 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 50097395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 15194623 - 15194480
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
15194623 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 15194524  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||||||| |||| ||||||||||||||| |||||||||    
15194523 tcaatattttaggcccaagccctatatttattcgagctaaacgg 15194480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 40731191 - 40731358
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| ||||| |||||||||| ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| |||||||||||     
40731191 cgggctacccgcggcccattcggactagccctaacgggtaacgggcttttaagggccgggctaaaaagccctattaaaatccgggctcaatattttaggc 40731290  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    |||| |||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||||||    
40731291 ccaagccctatatttattcgggctaaacgggtcggcccatacgggccggcccgttttgacagctctac 40731358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 51435550 - 51435703
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
51435550 gttatgcgggctaacgggctacccgcggcccattcgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 51435649  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    | ||||||||||| |||| | |||||||||||||||||||||||| ||| ||||    
51435650 tcaatattttaggcccaagctctatatttattcgggctaaacgggccggcccat 51435703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 26706883 - 26707027
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| || |||||||||||||||    
26706883 gttatgcggactaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccatattaaaattcgggc 26706982  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
26706983 tcaatattttaggcccaagccctatatttattcgggctaaacggg 26707027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 54093962 - 54094106
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
54093962 gttatgcgggctaacgggctacccgcagcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggc 54094061  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||| | |||| ||||||||||||||||| ||||||||    
54094062 tcaatattttaagcccaagccctatatttattcgggttaaacggg 54094106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 19521739 - 19521920
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||| ||||||||| | ||||| |||| ||| ||||||||||||||    
19521739 gttatgcgggctaacgggttacccgcggcccattcgggctagccctaacgggtatcgggcttttaaggactgggctaaaaagccccattaaaattcgggc 19521838  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| ||||||||||||||||||||| ||||||||| |||  |||| || ||  |||||||||||||||||||    
19521839 tcaatattttaggcccaaaccctatatttattcggactaaacgggccggctcatacggaccgacccgttttgacagctctac 19521920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 24678416 - 24678272
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
24678416 gttatgcgggctaacgggctacccgcggctcattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgagc 24678317  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | |||||||||||  ||| | ||||||||||||||||||||||||    
24678316 tcaatattttaggctcaagctctatatttattcgggctaaacggg 24678272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 30000392 - 30000213
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | ||||||||||| ||||| ||||  |||||||||||| ||||    
30000392 gttatgcgggctaacgggctaccagcggcccattcgggctagccctaacgggtaccaggcttttaagggctgggctaaaaaggcctattaaaatttgggc 30000293  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| | | || ||||| || |||||||||||||||||||    
30000292 tcaatattttaggcccaagccctatatttattcgggctaaacggg-ccgcccgtatgggccggcccgttttgacagctcta 30000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 39240400 - 39240540
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
39240400 gttatgcgggctaacgggctacccgcggcccattcgggctagctctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 39240499  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | ||||||||||| | || ||||||||||||||||||||||    
39240500 tcaatattttaggcctaagccctatatttattcgggctaaa 39240540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 39809594 - 39809738
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||| ||||||||||||||||| |||| ||||||||||||||||||    
39809594 gttatgcgggctaacgggctacccgcggcccattcgggctagctctaacggataccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 39809693  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | |||||||||||  ||| ||||||||||||||||||||||||||    
39809694 tcaatattttaggctcaagccctatatttattcgggctaaacggg 39809738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 35666713 - 35666583
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| | |||| ||||||||||||||||||| |||||||||||     
35666713 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcgggctcaatattttaggc 35666614  T
162 ccaaaccctatatttattcgggctaaacggg 192  Q
    |||| ||||||||||||||||||||||||||    
35666613 ccaagccctatatttattcgggctaaacggg 35666583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 225
Target Start/End: Original strand, 56114169 - 56114346
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||| ||||||| |||| |||||||||||||  |||    
56114169 gttatgcgggctaacgggctacccgtggcccgttcgggctagccctaacgggtaccgggctttttaggaccgggctaaaaagccctattaaaatttaggc 56114268  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagct 225  Q
    | ||||||| ||| |||| ||||||| ||| ||||||||||||| | ||||  || || || ||||||||||||||||    
56114269 tcaatatttaaggcccaagccctataattaatcgggctaaacggataggtctgtacggcccggcccgttttgacagct 56114346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 62 - 222
Target Start/End: Original strand, 1138978 - 1139138
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| |||| ||| ||||||| ||||||||  ||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||     
1138978 cgggctacccgcggcccattcgagctggccctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaatttgggctcaatattttaggc 1139077  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgaca 222  Q
    |||  |||||||||||||||||||||||||| ||| ||||| || || |||||||||||||    
1139078 ccaggccctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgaca 1139138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 16623606 - 16623462
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||| ||||| ||| ||||| ||||||||||| |||| ||||||||||||||||||    
16623606 gttatgcgggctagcgggctactctcggcccgttcgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggc 16623507  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| ||| |||| ||||||||||| ||||||||||||||    
16623506 tcaatatttaaggcccaagccctatatttaatcgggctaaacggg 16623462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 34436037 - 34435894
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||| || |||| ||| ||||||||||||||    
34436037 gttatgcgggctaacaggctacccgcggcccattcgggctagccctaacaggtaccgggcttttaagggccggactaaaaagccccattaaaattcgggc 34435938  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||| ||||||||||||||||||||||    
34435937 tcaatattttaggcccaagccc-atatttattcgggctaaacggg 34435894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 48152847 - 48152681
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||               ||| |||||||||||||||||||||||    
48152847 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgg---------------gctaaaaaaccctattaaaattcgggc 48152763  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||||||||||||||||| ||||  || || ||||||||||||||||||||    
48152762 tcaatattttaggcccaagccctatatttattcgggctaaacgggtcggcccatccgggccggcccgttttgacagctctac 48152681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 18861623 - 18861751
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||  || |||| ||||||||||||||||||| |||||||||||     
18861623 cgggctacccgcggcccgttcgggctagccctaacgggtatcgggcttttaagggccgaactaaaaagccctattaaaattcgggctcaatattttaggc 18861722  T
162 ccaaaccctatatttattcgggctaaacggg 192  Q
    |||||||  ||||||||||||||||||||||    
18861723 ccaaacc--atatttattcgggctaaacggg 18861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 44871486 - 44871639
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| | | ||||| ||||||||||| |||| ||||||||||||||| ||    
44871486 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagcaggctttttagggccgggctaaaaagccctattaaaattcgagc 44871585  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    | ||||||| ||  |||||||||||| ||| |||||||||||||| || |||||    
44871586 tcaatatttaagacccaaaccctataattaatcgggctaaacgggccgatccat 44871639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 41140749 - 41140601
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||| | |||| ||||||||||||||||||    
41140749 gttatgcgggcgaacgggctacccgcggcccgttcgggctagccctaacgggtacggggctttttagggccgggttaaaaagccctattaaaattcgggc 41140650  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcgg 196  Q
    | ||||||| |||  ||| || |||| ||| ||||||||||||| ||||    
41140649 tcaatatttaaggctcaagccttataattaatcgggctaaacggatcgg 41140601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 13563374 - 13563506
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||            ||||||||||||||||    
13563374 gttatgcgggctaacggactacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccg------------ctattaaaattcgggc 13563461  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
13563462 tcaatattttaggcccaaaccctatatttattcgggctaaacggg 13563506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 32555822 - 32555640
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||| ||||| ||| ||||| ||| ||||||| | || ||||||||||||||| ||    
32555822 gttatgcgggctagcgggctaccctcggcccgttcggactagccctaacgggtagcgggctttttaggaccgggctaagaagccctattaaaattcgagc 32555723  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    | ||||||| ||| ||||  |||||| ||| ||||||||||||||  || ||||| || ||  ||||||||||||||||||||    
32555722 tcaatatttaaggcccaagacctataattaatcgggctaaacgggctggcccatacggcccgacccgttttgacagctctacc 32555640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 36694112 - 36694222
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||||||||| ||||||||||| |||   ||||||||||||||    
36694112 cgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaaaccctattaaaattcgggctcaatattttaggcccatgtcctatatttattcg 36694211  T
182 ggctaaacggg 192  Q
    |||||||||||    
36694212 ggctaaacggg 36694222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 19474665 - 19474806
Alignment:
51 atgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctta 150  Q
    |||| ||||||| |||||||||||||||||||||  ||||||||| ||||||||| ||||| ||||||||||| |||| ||||||||||||||| ||| |    
19474665 atgctggctaacaggctacccgcggcccgttcggattagccctaatgggtaccgggctttttagggccgggctaaaaagccctattaaaattcgagctca 19474764  T
151 atattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    |||||| ||| |||| ||||||| ||| ||||| ||||||||    
19474765 atatttaaggcccaagccctataattaatcgggttaaacggg 19474806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 41883116 - 41883259
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||||||||| || ||||||| ||||||||||||||| ||||||| || || ||| ||||| ||| ||||||| |||| ||||||||||||||| |||    
41883116 ttatgcgggctagcgtgctaccctcggcccgttcgggctggccctaacggatagcgggctttttaggtccgggctaaaaagccctattaaaattcgagct 41883215  T
149 taatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
     ||||||| ||| |||||||||||| ||| ||||||||||||||    
41883216 caatatttaaggcccaaaccctataattaatcgggctaaacggg 41883259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 56520111 - 56519969
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||||||||||||| || ||||||| |||||| |||||| ||||||||| ||||| |||| |||||| |||| ||||||||||||||||||    
56520111 gttatgcaggctaacgggctacc-gcagcccgtttgggctatccctaacgggtaccgggctttttagggtcgggctaaaaagccctattaaaattcgggc 56520013  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||    
56520012 tcaatatttaaggaccaagccctataattaatcgggctaaacgg 56519969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 52278776 - 52278955
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||||||||  ||||| |||||||||||||||| ||||| ||| ||||| |||| ||||||   || ||||||||||||||| ||    
52278776 gttatgcgggctagcgggctacccttggccc-ttcgggctagccctaacgggtagcgggctttttagggtcgggctatgaagccctattaaaattcgagc 52278874  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| |||| || ||| |||||||||||||| ||  ||||| || ||  ||||||||||||||||||    
52278875 tcaatatttaaggcccaagccctgtaattaatcgggctaaacgggccgacccatacggcccgacccgttttgacagctcta 52278955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 33493102 - 33493269
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||| ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||| | ||||||||||| | ||| ||||||| |||     
33493102 cgggttacccacggcccgttcggactagccctaacgggtaccggactttttagggccgggctaaaaagctctattaaaatttgagctcaatatttaaggc 33493201  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | |||||||||| ||| |||| |||||||  |||| || ||   | | ||||||||||||||||||||    
33493202 caaaaccctataattaatcggactaaacgaatcggcccgtaaaattccgcccgttttgacagctctac 33493269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 49480861 - 49480751
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||   |||| ||  |||||||||||||| || |||| ||||||||||||| ||||    
49480861 gttatgcggactaacgggctacccgcggcccgttcgagctagccctattaggtatcgagcttttaagggccggactaaaaagccctattaaaatttgggc 49480762  T
148 ttaatatttta 158  Q
    | |||||||||    
49480761 tcaatatttta 49480751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 41831349 - 41831169
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||| || |||| ||||| || |||||||||||||||||||| ||||| ||| ||||| ||| ||||  | ||||  |||||||| |||||||     
41831349 gttatgcgggttagcgggttaccctcgacccgttcgggctagccctaacgggtagcgggctttttaggaccggattaaaaagtcctattaatattcgggt 41831250  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| || |||||||| |||||||| ||||| |||||||| ||  ||||| ||  | ||||||||||||| |||||    
41831249 tcaatatttaagatccaaaccttatatttaatcgggataaacgggccgacccatacggctcggcccgttttgacaactcta 41831169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 45849438 - 45849299
Alignment:
51 atgcgggctaacgggctaccc-gcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctt 149  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||| |||||||| | |||| |||| |||||| ||||||| |||||||||||||| |     
45849438 atgcgggctaacgggctaccccgtggcccattcaggctagccctaacgggtaccgaattttttagggtcgggctaaaaaacc-tattaaaattcgggttc 45849340  T
150 aatattttaggtccaaaccctatatttattcgggctaaacg 190  Q
    ||||||| ||| |||| ||||||| ||| ||||| ||||||    
45849339 aatatttaaggcccaagccctataattaatcgggttaaacg 45849299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 16346855 - 16347021
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||               ||| |||| || |||||||||||||||    
16346855 gttatgcgggctatcgggcaacccgcggcccgttcgggctagccctaaagagtatcgg---------------gctaaaaatccatattaaaattcgggc 16346939  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||| ||| |||||||||||| ||| || |||||||| || ||| ||||| |  || ||||||||||||||||||||    
16346940 tcaatatttaaggcccaaaccctataattaatcaggctaaacaggccggcccatacgtcccagcccgttttgacagctctac 16347021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 51031728 - 51031641
Alignment:
114 gggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    |||||||||| ||||  |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||| ||| ||||    
51031728 gggccgggctaaaaagtcctattaaaattcgggctcaatattttaggcccaagccctatatttattcgggctaaatgggccggcccat 51031641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 4709381 - 4709252
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||               ||||||| |||| ||||||||||||||||||    
4709381 gttatgcgggctaacgggctacccgcagcccattcgggctagccctaacgggta---------------ccgggctaaaaagccctattaaaattcgggc 4709297  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||   |||||| |||||||||||||| ||||||||    
4709296 tcaatattttagacgcaaaccttatatttattcggggtaaacggg 4709252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 6366444 - 6366323
Alignment:
107 cttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggt 206  Q
    ||||| |||||| |||| |||| ||||||||||||||||||| ||||||| ||| |||||||||||| ||| ||||| |||||||| ||| |||||  |     
6366444 ctttttagggccaggctaaaaagccctattaaaattcgggctcaatatttaaggcccaaaccctataattaatcgggttaaacgggccggcccatacagc 6366345  T
207 cctgcccgttttgacagctcta 228  Q
    || || | ||||||||||||||    
6366344 ccggctcattttgacagctcta 6366323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 42248129 - 42248053
Alignment:
125 aaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    |||| |||||| |||||||||||| ||||||| |||||||||||||||| ||| |||||||||||||||||| ||||    
42248129 aaaatccctataaaaattcgggctgaatatttaaggtccaaaccctataattaatcgggctaaacgggtcggcccat 42248053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 24534651 - 24534741
Alignment:
64 ggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatatt 155  Q
    |||||||| ||||||||||||||||||||||| | ||| ||| ||||| | ||||||||| |||||| ||||||||||||||||| ||||||    
24534651 ggctaccctcggcccgttcgggctagccctaatgagtagcgggctttttaaggccgggct-aaaaactctattaaaattcgggctcaatatt 24534741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 40226904 - 40227017
Alignment:
117 ccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgtt 216  Q
    ||||||| |||| | |||||||||||||  || ||||||| ||| |||||||||||| ||| || ||||||||||||||| || || || || | |||||    
40226904 ccgggctaaaaagctctattaaaattcgacctcaatatttaaggcccaaaccctataattaatcaggctaaacgggtcggcccgtacggcccagtccgtt 40227003  T
217 ttgacagctctacc 230  Q
    |||||| |||||||    
40227004 ttgacatctctacc 40227017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 42587327 - 42587438
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||| |||||| ||||||||||| ||||   || ||||| | ||||| ||| ||||| ||||||||||||| |||| ||||||| |||     
42587327 cgggctacccgcggctcgttcgagctagccctaatgggtgttgggctttttaaggccgagctaaaaaatcctattaaaattcaggctcaatatttaaggc 42587426  T
162 ccaaaccctata 173  Q
     || ||||||||    
42587427 tcagaccctata 42587438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 48500306 - 48500377
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccg 119  Q
    |||||| |||||| ||||||| || |||||||||||||||||||||||  |||| ||| |||||||||||||    
48500306 gttatgtgggctagcgggctatcctcggcccgttcgggctagccctaacaggtagcgggcttttaagggccg 48500377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 31616494 - 31616660
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||||||| ||||| |||||| | ||||||| ||||| |||  ||||   ||||  ||||||||||||| |||| ||||||| | |     
31616494 cgggctacccgcggcccgttcaggctaaccctaacgagtaccgggctttttaggatcgggtcaaaaagtcctattaaaattcaggctcaatatttaaagc 31616593  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    ||||  |||||| ||  ||||||||||  || ||||||||| || ||  | |||||||||| |||||    
31616594 ccaagtcctataattgatcgggctaaataggccggtccatacggcccgacacgttttgacaactcta 31616660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 35013933 - 35013830
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| ||||||||||||||||||||||| ||||| |   ||||| || |||||| | ||||  | |||||||||||||| | ||||||| |||     
35013933 cgggctaccctcggcccgttcgggctagccctaacgggtagctagctttttagagccgggttaaaaagtcatattaaaattcgggttcaatatttaaggc 35013834  T
162 ccaa 165  Q
    ||||    
35013833 ccaa 35013830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 48500383 - 48500461
Alignment:
150 aatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    ||||||| ||| |||| ||||||| ||| |||||||||||||| | | |||||||| || ||| |||||||||||||||    
48500383 aatatttaaggcccaagccctataattaatcgggctaaacgggccagcccatatggcccggcctgttttgacagctcta 48500461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 20671894 - 20671979
Alignment:
144 gggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    ||||| ||||||| ||| |  ||||||||| ||| |||||||||||||||||| ||||| || || | || |||||||||||||||    
20671894 gggctcaatatttaaggcctgaaccctataattaatcgggctaaacgggtcggcccatacggcccggtcctttttgacagctctac 20671979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 8907050 - 8907100
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagg 98  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||| |||||    
8907050 gttatgcaggcgaacgggctacccgcagcccgttcaggctagccccaaagg 8907100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 31290646 - 31290614
Alignment:
60 aacgggctacccgcggcccgttcgggctagccc 92  Q
    |||||||||||||||||||| ||||||||||||    
31290646 aacgggctacccgcggcccggtcgggctagccc 31290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 32767722 - 32767598
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||| |||| ||||||  |||||||||| ||| |||| |||| |||||  |||||||||| |||| ||||   ||||||||||||  |  | |||||     
32767722 cgggctgcccgtggcccgaacgggctagccttaacgggttccgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggc 32767623  T
162 ccaaaccctata-tttattcgggct 185  Q
    |||| ||||||| ||||||||||||    
32767622 ccaagccctatattttattcgggct 32767598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 2e-65; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 31743022 - 31742840
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| | ||||||||||||||||    
31743022 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagctctattaaaattcgggc 31742923  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || |||||||||||||||||||||    
31742922 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgacagctctacc 31742840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 27496026 - 27495846
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
27496026 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 27495927  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || || | |||||||||||||||||    
27495926 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacgggccggtccgttttgacagctcta 27495846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 1346246 - 1346390
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
1346246 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggc 1346345  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
1346346 tcaatattttaggcccaagccctatatttattcgggctaaacggg 1346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 1002473 - 1002653
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||||| |||| ||||||||||||||| ||    
1002473 gttatgcgggctaatgggctacccacggcccgttcgggctagccctaacgggtaccgggcttttatgggccgggctaaaaagccctattaaaattcgagc 1002572  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| ||||||||||||||||||||||||||||||| ||  ||||| || ||  ||| ||||||||||||||    
1002573 tcaatattttaggcccaaaccctatatttattcgggctaaacgggccgacccatacggcccgacccattttgacagctcta 1002653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 10261452 - 10261308
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| | |||| |||| ||||||||||||||||||    
10261452 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcaggctaaaaagccctattaaaattcgggc 10261353  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
10261352 tcaatattttaggcccaagccctatatttattcgggctaaacggg 10261308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 30555785 - 30555605
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||| |||| ||| ||||||||||||||||||| || || ||| ||||| ||||||||||| |||||||||||||||||||||||    
30555785 gttatgcgggctagcgggcaaccctcggtccgttcgggctagccctaacggatagcgggctttttagggccgggctaaaaaaccctattaaaattcgggc 30555686  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| |||||||||||||||| ||| ||||||||||||| |||| ||||| || || |||||||||||||||||||    
30555685 tcaatatttaaggtccaaaccctataattaatcgggctaaacggatcggcccatacggcccggcccgttttgacagctcta 30555605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 31618062 - 31618242
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||| || |||||||| |||| ||||||||||||||||||    
31618062 gttatgcgggctaacgggctacccgcggcccgttcggactagccctaacgggtaccgggctttttagagccgggctaaaaagccctattaaaattcgggc 31618161  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| || ||||||| ||||||| ||||| || || |||||||||||||||||||    
31618162 tcaatatttaaggcccaagccctataattaatcaggctaaatgggtcggcccataaggcccggcccgttttgacagctcta 31618242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 28223054 - 28222875
Alignment:
50 tatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctt 149  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||||||||||||||||     
28223054 tatgcggactaacgggctacccgcggcctgttcgggctagccctaacgggtaccgggcttttaagagccgggctaaaaagccctattaaaattcgggctc 28222955  T
150 aatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||| ||| |||||||||||||||||||||||  || ||| ||||| |  || ||||||||||||||||||||    
28222954 attattttaggcccagaccctatatttattcgggctaaataggccggcccatacgacccggcccgttttgacagctctac 28222875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 48 - 230
Target Start/End: Original strand, 12847831 - 12848013
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  || ||||| ||||||||||| ||||| |||||||||||||||||    
12847831 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagtgggctttttagggccgggctaaaaaatcctattaaaattcgggc 12847930  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    | ||||||| ||| |||| ||||||||||| ||||| |||||| ||||| ||||| || || |||||||||||||||||||||    
12847931 tcaatatttaaggcccaagccctatatttaatcgggataaacgtgtcggcccatacgggccggcccgttttgacagctctacc 12848013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 35439504 - 35439646
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
35439504 gttatgcgggctaacgggctacccgcggtcccttcgggcttgccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 35439603  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacg 190  Q
    | ||||||||||| |||| ||||||||||||||||||||||||    
35439604 tcaatattttaggcccaagccctatatttattcgggctaaacg 35439646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 36240734 - 36240900
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| |||| ||||||||||||||||||| ||||||||| |     
36240734 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggctcaatattttatgc 36240833  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    ||||||||||||||||||||||||||||||  ||||||||| || ||   || ||||||||||||||    
36240834 ccaaaccctatatttattcgggctaaacggaccggtccatacggcccgatccattttgacagctcta 36240900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 29810845 - 29810679
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| |||| ||||||||||| ||||||| | ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||     
29810845 cgggctacccgcggcccattcgtgctagccctaacgggtaccaggcttttaagggccgggctaaaaatccctattaaaattcgggctcaatattttaggc 29810746  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||| |||||||||||||||||||||||||| ||| |||||  |  | |||||||||||||||||||    
29810745 ccaagccctatatttattcgggctaaacgggccggcccatacagctcagcccgttttgacagctcta 29810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 10822246 - 10822426
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| |||| ||||||||||||||||||    
10822246 gttatgcgggctaacaagctacccgcggcccgttcgggctagccctaacgggtaccgggttttttagggccgggctaaaaagccctattaaaattcgggc 10822345  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||| || || || ||  ||||||||||||||||||    
10822346 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccggcccgtaaggcccgacccgttttgacagctcta 10822426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 26984434 - 26984614
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| | ||||||| | |||| |||||||||||||||| |    
26984434 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaatgggtagcgggctttttaaggccgggttaaaaagccctattaaaattcggac 26984533  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||||||||||||||| ||||| |||||||| ||| ||||| || || |||||||||||||||||||    
26984534 tcaatatttaaggcccaaaccctatatttaatcggggtaaacgggccggcccatacggcccagcccgttttgacagctcta 26984614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 62 - 229
Target Start/End: Complemental strand, 27552103 - 27551936
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||| |||||||||||||| |||| ||||||| | |     
27552103 cgggctacccgcggcccgttcgggctagccctaatgggtaccgggctttttagggccgggctaaaaagccctattaaaattcaggctcaatatttaaagc 27552004  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    |||| ||||||| ||| |||||||||||||||||| || || || || ||||||||||||||||||||    
27552003 ccaagccctataattaatcgggctaaacgggtcggcccgtaaggcccggcccgttttgacagctctac 27551936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 23334189 - 23334006
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||| ||| ||||| |||||||| || |||| ||||||||||||||||||    
23334189 gttatgcgggctagcgggctaccctcggtccgttcgggctagccctaacgggtagcgggctttttagggccggactaaaaatccctattaaaattcgggc 23334090  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatat--ggtcctgcccgttttgacagctctac 229  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||||||| || |||  || || ||||||||||||||||||||    
23334089 tcaatatttaaggcccaagccctataattaatcgggctaaacgggtcgggccctattgggcccggcccgttttgacagctctac 23334006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 45517306 - 45517162
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||| ||| |||||| |||| | ||||||||||||||||    
45517306 gttatgcgggctaacgggctacccgcggcccattcgggctagccctatcgggtaccgggcttttatgggtcgggctaaaaagctctattaaaattcgggc 45517207  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||  |||| ||||||||||||||||||||||||||    
45517206 tcaatattttagacccaagccctatatttattcgggctaaacggg 45517162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 10440269 - 10440139
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| ||||||||||||||||  |||||||| |||||||||| |||||| |||| ||||||||||||||||||| |||||||||||     
10440269 cgggctacccgcggcccattcgggctagccctaacaggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggctcaatattttaggc 10440170  T
162 ccaaaccctatatttattcgggctaaacggg 192  Q
    |||| ||||||||||||||||||||||||||    
10440169 ccaagccctatatttattcgggctaaacggg 10440139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 38962213 - 38962342
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
38962213 gttatgcgggttaacgggctacccttggcccgttcgggctagccctaacaggtaccggacttttaagagccgggctgaaaaaccctattaaaattcgggc 38962312  T
148 ttaatattttaggtccaaaccctatattta 177  Q
    | |||||||||||  ||| |||||||||||    
38962313 tcaatattttaggctcaagccctatattta 38962342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 41644434 - 41644258
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||| ||||| ||||||||| |||| |||||| |||| ||||||||||||||||||    
41644434 gttatgcgggctagcgggctaccctcggcccgttcgggctacccctaacgggtagcggactttttagggtcgggctaaaaagccctattaaaattcgggc 41644335  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagc 224  Q
    | ||||||| ||| |||| |||| || ||  |||||||||||||| ||||||||| || || | |||||||||||||    
41644334 tcaatatttaaggcccaagccctgtaatttatcgggctaaacgggccggtccatacggcccggtccgttttgacagc 41644258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 42799657 - 42799478
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||| ||||| ||||| |||||||||||||||||    
42799657 gttatgcgggctaacgagctacccgcggcccgttcgggctagtcctaacgggtaccgggctttttagggctgggct-aaaaaacctattaaaattcgggc 42799559  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||| ||||||||||||| ||||| ||  |  || |||||||||||||||    
42799558 tcaatatttaaggcccaagccctataattaatcggtctaaacgggtcggcccatacggcacaacctgttttgacagctcta 42799478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 13247857 - 13247727
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||     
13247857 cgggctacccgcggcccattcaggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttaggc 13247758  T
162 ccaaaccctatatttattcgggctaaacggg 192  Q
    | || ||| ||||||||||||||||||||||    
13247757 ctaagccccatatttattcgggctaaacggg 13247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 30016206 - 30016336
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||     
30016206 cgggctacccgcggcccattcgggctaaccctaatgggtaccgggcttttaagggctgggctaaaaagccctattaaaattcgggcttaatattttaggc 30016305  T
162 ccaaaccctatatttattcgggctaaacggg 192  Q
    |||| |||||||||||||| | |||||||||    
30016306 ccaagccctatatttattcagactaaacggg 30016336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 30801174 - 30801318
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||| | |||||| |||||  |||| ||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
30801174 gttatgcgggctaactgactacccacggcctattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 30801273  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| | || |||||||||||||||||||||    
30801274 tcaatattttaggcccaagctctttatttattcgggctaaacggg 30801318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 2650055 - 2650186
Alignment:
48 gttatgcgggctaacgggctacccgcgg-cccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcggg 146  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||||||    
2650055 gttatgcgggctaacgggctacctgcgggcccattcgggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccctattaaaattcggg 2650154  T
147 cttaatattttaggtccaaaccctatatttat 178  Q
    || ||||||||||| |||| ||||||||||||    
2650155 ctcaatattttaggcccaagccctatatttat 2650186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 34313880 - 34313729
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| || ||||||| |||||||||||| ||||| | ||||||| ||||||||||| |||| ||||||||||||| ||||    
34313880 gttatgcgggctagcgggctaccctcgacccgttcaggctagccctaacgggtagcagactttttagggccgggctaaaaagccctattaaaatttgggc 34313781  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtcc 199  Q
    ||||||||| ||| |||| ||||||| ||| |||||||||||||| ||||||    
34313780 ttaatatttaaggcccaagccctataattaatcgggctaaacgggccggtcc 34313729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 18258032 - 18258172
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||| ||||||||||||| | ||||||||| ||||||||| ||||||||||||||| | |||| |||||||||||||||| || |||||||||||     
18258032 cgggctactcgcggcccgttcgaggtagccctaacgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcggactcaatattttaggc 18258131  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccata 202  Q
    ||||  ||||||||||||||||||||||||| ||| |||||    
18258132 ccaagtcctatatttattcgggctaaacgggccggcccata 18258172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 2557799 - 2557616
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||  |||||| || ||||||||||||| ||||| ||| ||||| ||||| ||||| |||||| ||||||||||||||||    
2557799 gttatgcgggctagcgggctaccatcggcccatttgggctagccctaacgggtagcgggctttttagggctgggctaaaaaactctattaaaattcgggc 2557700  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacct 231  Q
    | ||||||| ||| |||| ||||||| ||| || ||||||||||| ||   |||| || || || |||||||||||||||||||    
2557699 tcaatatttaaggcccaagccctataattaatcaggctaaacgggccgactcatacggcccggctcgttttgacagctctacct 2557616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 10709889 - 10709709
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||| | |||||||||  ||||||||||||||||||||||| ||||| ||| ||||| |||| |||| | |||| |||||||||||||| | |    
10709889 gttatgcgggcgagcgggctaccttcggcccgttcgggctagccctaacgggtagcggcctttttagggtcgggttaaaaagccctattaaaattcagac 10709790  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| | | ||||| || || |||| ||||||||||||||    
10709789 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccagcccatacggcccggcccattttgacagctcta 10709709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 19944766 - 19944946
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||||   ||||||||||||| ||| ||||||| |||| |||| |||||| ||||||    
19944766 gttatgtgggctaacgagctacccgcagcccgttcgggctagccctaatttgtaccggactttttaggaccgggctaaaaagccctcttaaaaatcgggc 19944865  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| | |  ||| ||||||| ||| |||||||||||||||||| || |  || |  |||||||||||||||||||    
19944866 tcaatatttaaagcacaagccctataattaatcgggctaaacgggtcggcccctgcggcctggcccgttttgacagctcta 19944946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 25868901 - 25869044
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||||| || || ||| ||||| ||| ||||||| |||| ||||||||||||||||||    
25868901 gttatgtgggctagcgggctaccctcggcccgttcgggctagccctaatggatagcgggctttttaggaccgggctaaaaagccctattaaaattcgggc 25869000  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||| ||| |||| || |||| ||| |||||||||||||    
25869001 tcaatatttaaggcccaagccttataattaatcgggctaaacgg 25869044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 37209506 - 37209654
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |  || |    |||| ||||||||| | |||||||||||||||||||||||    
37209506 gttatgcgggctaacgggctacccgcggcccgttcgggttagccctaacgaatatcttgatttttagggccgggttaaaaaaccctattaaaattcgggc 37209605  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcgg 196  Q
    | ||||||| ||| |||| ||||||| ||| ||||| ||||||| ||||    
37209606 tcaatatttcaggcccaagccctataattaatcgggttaaacggatcgg 37209654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 13311652 - 13311525
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| | |||| ||| |||||||||||| || ||||||| | |     
13311652 cgggctacccgcggcccgttcgggctagccctaatgggtaccgggctttttagggccgggttaaaaagcccaattaaaattcggactcaatatttaaagc 13311553  T
162 ccaaaccctatatttattcgggctaaac 189  Q
    |||| ||||||| ||| |||||||||||    
13311552 ccaagccctataattaatcgggctaaac 13311525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 27258811 - 27258928
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  |||||| | ||| |||| |||||| |||| |||||||||||| |||||    
27258811 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgaataccgggcattttagggtcgggctaaaaagccctattaaaatacgggc 27258910  T
148 ttaatattttaggtccaa 165  Q
    | ||||||| ||| ||||    
27258911 tcaatatttaaggcccaa 27258928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 20932462 - 20932597
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||         |||| ||||| |||| ||||||| ||||||||||    
20932462 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacggataccg---------gggctgggctaaaaagccctattcaaattcgggc 20932552  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| || |||||||||||||| ||||||||    
20932553 tcaatattttaggcccaagccttatatttattcgggttaaacggg 20932597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 12017480 - 12017599
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||| ||| ||||| |||| |||||| |||| |||| |||||||| ||||| ||||||| |||  ||| || |||||||| |||    
12017480 cgggctagccctaacgggtagcgggctttttagggtcgggctaaaaagcccttttaaaatttgggctcaatatttaaggctcaagccttatatttaatcg 12017579  T
182 ggctaaacgggtcggtccat 201  Q
    ||||||| ||||||||||||    
12017580 ggctaaatgggtcggtccat 12017599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 9439274 - 9439408
Alignment:
92 ctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    |||| |||||||| | |||| | ||||||||| |||| ||||||||||||||||||| ||| ||| ||| ||||  |||||| ||| | |||||||||||    
9439274 ctaacgggtaccgaattttttaaggccgggctaaaaagccctattaaaattcgggctcaatgtttaaggcccaagtcctataattaattgggctaaacgg 9439373  T
192 gtcggtccatatggtcctgcccgttttgacagctc 226  Q
    | ||| || || || || |||||||||||||||||    
9439374 gccggcccgtagggcccggcccgttttgacagctc 9439408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 82 - 228
Target Start/End: Original strand, 37208889 - 37209036
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    ||||||| ||| || |||||||||  |||| ||||||||| | |||||||||||||||||||||| | ||||||| ||| ||||  | |||| ||| |||    
37208889 cgggctaacccaaacgggtaccgggttttttagggccgggataaaaaaccctattaaaattcggggtcaatatttaaggcccaagtcgtataattaatcg 37208988  T
182 ggctaaacgggtcggtccatatggtcctgcccg-ttttgacagctcta 228  Q
    |||||||| || ||| ||||| || || || || ||||||||||||||    
37208989 ggctaaacaggccggcccatacggcccggctcgtttttgacagctcta 37209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 9e-65; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 7949694 - 7949875
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
7949694 gttatgctgactaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaatttgggc 7949793  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||||||||||||||||||||||||||||||  || ||||| || || ||||||||||||||||||||    
7949794 tcaatattttaggcccaaaccctatatttattcgggctaaacgggctggcccatacggcccggcccgttttgacagctctac 7949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 26264358 - 26264538
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
26264358 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 26264457  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | |||| |||||| |||| |||||||||||||||||||||||||  ||| ||||| || || |||||||||||||||||||    
26264458 tcaataatttaggcccaagccctatatttattcgggctaaacggaccggcccatacgggccggcccgttttgacagctcta 26264538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 26507378 - 26507198
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||| |||    
26507378 gttatgcgggctaacgggctacccgcggcccattcggtctaaccctaacgggtaccgggcttttaagggccgggctaaaaagccctatcaaaattcaggc 26507279  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | |||||||| || |||| |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
26507278 tcaatattttcggcccaagccctatatttattcgggctaaacgggccggcccatatgggcctgcccgttttgacagctcta 26507198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 24566369 - 24566188
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
24566369 gttatgcgggctaacgggctacccgcggcccgttcgggcttgccctaacgggtaccggactttttagggccgggctaaaaagccctattaaaattcgggc 24566270  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||| || || || || ||||||||||||||||||||    
24566269 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccggcccgtaaggcccggcccgttttgacagctctac 24566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 24607405 - 24607224
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
24607405 gttatgcgggctaacgggctacccgcggcccgttcgggcttgccctaacgggtaccggactttttagggccgggctaaaaagccctattaaaattcgggc 24607306  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||| || || || || ||||||||||||||||||||    
24607305 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccggcccgtaaggcccggcccgttttgacagctctac 24607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 28759338 - 28759482
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
28759338 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 28759437  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
28759438 tcaatattttaggcccaagccctatatttattcgggctaaacggg 28759482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 20122848 - 20122706
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||||    
20122848 ttatgcgggctaacgggttacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct 20122749  T
149 taatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
     |||||||||||||||| |||||||||||||||||||||||||    
20122748 caatattttaggtccaagccctatatttattcgggctaaacgg 20122706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 39479487 - 39479307
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||| || |||||||||||||||    
39479487 gttacgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccatattaaaattcgggc 39479388  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| |||||||||||||||| ||| |||||||||||||| ||| || || || || ||| |||||||||||||||    
39479387 tcaatatttaaggtccaaaccctataattaatcgggctaaacgggccggcccgtaaggcccggcctgttttgacagctcta 39479307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 5361142 - 5361320
Alignment:
50 tatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctt 149  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||  ||||||| ||||||||| |||| |||||||||||||||||||     
5361142 tatgcgggctaacgggctactcgcggcccgttcgggctagcc-taacgggtaccgtgcttttaacggccgggctaaaaagccctattaaaattcgggctc 5361240  T
150 aatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| || ||  ||| |||||||||||||||    
5361241 aatattttaggcccaagccctatatttattcgggctaaacgggccggcccatacggcccgacccattttgacagctctac 5361320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 1840513 - 1840657
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| || |||||| |||||||||| |||||| |||| ||||||||||||||||||    
1840513 gttatgcgggctaacgggctacccgcggcccattcgggctagtcctaacggataccgggcttttaagggtcgggctaaaaagccctattaaaattcgggc 1840612  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
1840613 tcaatattttaggcccaagccctatatttattcgggctaaacggg 1840657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 16749096 - 16748916
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||  |||| ||||||||||||||||||    
16749096 gttatgtgggctaacgggctacccgcggcccattcgggctagccctaacgggtatcgggcttttaagggccgggcaaaaaagccctattaaaattcgggc 16748997  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| ||||| |||||||||||||||||||||| | |||| ||||| |  || |||  ||||||||||||||    
16748996 tcaatattttaggcccaaatcctatatttattcgggctaaacagatcggcccatacgacccggcctattttgacagctcta 16748916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 27345231 - 27345374
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||  ||||||||||||||||| |||| ||||||||||||||||||    
27345231 gttatgcgggctaacgggctacccgcggcccattcgggctagtcctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggc 27345330  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||||| | |||| |||||||||||||||||||||||||    
27345331 tcaatattttatgcccaagccctatatttattcgggctaaacgg 27345374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 16654048 - 16653904
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || ||||||||||||| ||| |||| |||||||||||||| |||    
16654048 gttatgcgggctaactggctacccgcggcccattcgggctagccctaacgggtactgggcttttaagggccgtgctaaaaagccctattaaaattcaggc 16653949  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
16653948 tcaatattttaggcccaagccctatatttattcgggctaaacggg 16653904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 17320511 - 17320331
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||| |||||||||||| |||||    
17320511 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccctattaaaatccgggc 17320412  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| |||| || ||| ||||| |||||||| ||| || || || ||  ||||||||||||||||||    
17320411 tcaatatttaaggcccaagccctgtaattaatcgggttaaacgggccggcccgtaaggcccgacccgttttgacagctcta 17320331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 18922302 - 18922122
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||||||| ||||||| |||||||||||||||    
18922302 gttatgcgggctagcgggctaccctcggcccgttcgggctagccctaacgggtagcgggctttttagggccgggctaaaaaaccatattaaaattcgggc 18922203  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||  |||| ||||||| ||| |||||||||||||| ||| ||| | || || |||||||||||||||||||    
18922202 tcaatatttaagacccaagccctataattaatcgggctaaacgggccggcccacacggcccggcccgttttgacagctcta 18922122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 43320498 - 43320638
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||||||| || |||||||||||||||  ||||||    
43320498 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccaggcttttaagggccggactaaaaaaccctattaaatatcgggc 43320597  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | ||||||||| | |||||||||||||||||||||||||||    
43320598 tcaatattttaagcccaaaccctatatttattcgggctaaa 43320638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 48 - 189
Target Start/End: Original strand, 7073962 - 7074103
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| || ||||| |||||||||||||||||    
7073962 gttatgcaggctaacgggctacccgcggcccgttcggactagccctaatgggtaccggacttttaaggaccggtctaaaaaatcctattaaaattcgggc 7074061  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaac 189  Q
    | |||||||||||  ||| |||||||||||||||| ||||||    
7074062 tcaatattttaggctcaagccctatatttattcggactaaac 7074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 2466288 - 2466418
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||| || |||||||||||| ||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||     
2466288 cgggctacccgcggtccattcgggctagccataacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttaggc 2466387  T
162 ccaaaccctatatttattcgggctaaacggg 192  Q
    |||| ||||||||||||||||||||||||||    
2466388 ccaagccctatatttattcgggctaaacggg 2466418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 21162640 - 21162820
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||| ||| ||||| ||| ||||||| |||| ||||||| ||||||||||    
21162640 gttatgcgggctagcgggctaccctcggcccgttcgggctggccctaacgggtagcgggctttttaggtccgggctaaaaagccctattgaaattcgggc 21162739  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| ||||||||||||||  || ||||| || || |||||||||||||||||||    
21162740 tcaatatttaaggcccaagccctataattaatcgggctaaacgggcgggcccatacggcccggcccgttttgacagctcta 21162820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 7344656 - 7344836
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||  ||||||||| ||| ||||||||||| ||||||| ||||| ||| ||||| | | ||||||| |||| ||||||||||||||||||    
7344656 gttatgcgggctagtgggctaccctcggtccgttcgggctggccctaacgggtagcgggctttttaagtccgggctaaaaagccctattaaaattcgggc 7344755  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| |||||||| ||||||| ||| |||||||||||||| ||| ||||| || || | |||||||||||||||||    
7344756 tcaatatttaaggtccaatccctataattaatcgggctaaacgggccggcccatacggcccggtccgttttgacagctcta 7344836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 21151697 - 21151877
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||||||||  |||||||||||||| ||||||| ||||| | | ||||| ||| ||||||| |||| ||||||| ||||||||||    
21151697 gttatgcgggctagcgggctacccttggcccgttcgggctggccctaacgggtagcaggctttttaggtccgggctaaaaagccctattgaaattcgggc 21151796  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||| ||||| || || |||||||||||||||||||    
21151797 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccggcccatacggcccggcccgttttgacagctcta 21151877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 21158832 - 21159012
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||||||||  |||||||||||||| ||||||| || || ||| ||||| ||| ||||||| |||| ||||||| ||||||||||    
21158832 gttatgcgggctagcgggctacccttggcccgttcgggctggccctaacggatagcgggctttttaggtccgggctaaaaagccctattgaaattcgggc 21158931  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||| ||||| || || |||||||||||||||||||    
21158932 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccggcccatacggcccggcccgttttgacagctcta 21159012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 2800615 - 2800752
Alignment:
66 ctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaa 165  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| |||  |||||||||||||| |||| ||||||||||| ||||    
2800615 ctacccgcggcccgttcgggctagacctaacgggtaccgggcttttaagggccgagctaaaaggccctattaaaattc-ggctcaatattttaggcccaa 2800713  T
166 accctatatttattcgggctaaacgggtcggtccatatg 204  Q
    |||||||||||||| |||||||||||| ||| |||||||    
2800714 accctatatttatttgggctaaacgggccggcccatatg 2800752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 2806784 - 2806921
Alignment:
66 ctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaa 165  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| |||  |||||||||||||| |||| ||||||||||| ||||    
2806784 ctacccgcggcccgttcgggctagacctaacgggtaccgggcttttaagggccgagctaaaaggccctattaaaattc-ggctcaatattttaggcccaa 2806882  T
166 accctatatttattcgggctaaacgggtcggtccatatg 204  Q
    |||||||||||||| |||||||||||| ||| |||||||    
2806883 accctatatttatttgggctaaacgggccggcccatatg 2806921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 4725320 - 4725139
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||| || || ||||||| ||| ||||||||||||||||||| ||||| ||||||||| ||| ||||||| |||||||||||||||||||||||    
4725320 gttatgcgggttagcgagctaccctcggtccgttcgggctagccctaacgggtagcggactttttaggaccgggct-aaaaaccctattaaaattcgggc 4725222  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    | ||||||| ||| | || ||||||| ||| |||||||||||||  ||| ||||| || || | |||||||||||||||||||    
4725221 tcaatatttaaggcctaagccctataattaatcgggctaaacggaccggcccatacggcccggtccgttttgacagctctacc 4725139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 8320477 - 8320643
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| | ||||||  ||||| ||||||||||| |||| ||||||||||||||||||| ||||||| |||     
8320477 cgggctacccgcggcccgttcgggctagccctaacgagtaccgagctttttagggccgggctaaaaagccctattaaaattcgggctcaatatttaaggc 8320576  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | || ||||||| ||| |||||||||||||| ||| |  || |  || |||||||||||||||||||    
8320577 ctaagccctataattaatcgggctaaacgggccggcctgtaagacccggcccgttttgacagctcta 8320643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 17016624 - 17016470
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| |||||| |||||||||| |||||||||||| ||||||| || ||||| ||| ||||| ||||||||||| |||| ||||||||||||||||||    
17016624 gttatgtgggctagcgggctaccctcggcccgttcggtctagcccaaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcgggc 17016525  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccata 202  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||| |||||    
17016524 tcaatatttaaggcccaatccctataattaatcgggctaaacgggccggcccata 17016470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 1463208 - 1463066
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||||| |  |||||||||||||| |||| |||||||||||||||| |    
1463208 gttatacggactaacgggctacccgcggcccattcgggctagccctaacgggtaccgggc--ttaagggccgggctaaaaagccctattaaaattcggac 1463111  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| ||||    |||||||||||||||||||||||    
1463110 tcaatattttaggcccaagttttatatttattcgggctaaacggg 1463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 36682732 - 36682861
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    ||||||||||| ||||| |||||||||||||||  |||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||||||      
36682732 cgggctacccgtggcccattcgggctagccctagtgggtaccggacttttaagagccgggctaaaaagccctattaaaattcgggctcaatattttagac 36682831  T
162 ccaaaccctatatttattcgggctaaacgg 191  Q
    |||| ||||||||||| ||| |||||||||    
36682832 ccaagccctatatttactcgagctaaacgg 36682861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 14505870 - 14506014
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| ||| |||||||||||| |||||| ||||| ||||||||| ||||||||||| |||| |||||||||||| |||||    
14505870 gttatgcgggctagcgggctaccctcggtccgttcgggctaaccctaacgggtagcggactttttagggccgggctaaaaagccctattaaaatccgggc 14505969  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||| ||| |||| | ||||| ||| ||||||||||||||    
14505970 tcaatatttaaggcccaagctctataattaatcgggctaaacggg 14506014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 5494760 - 5494666
Alignment:
97 gggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
5494760 gggtaccggacttttaagggtcgggctaaaaagccctattaaaattcgggctcaatattttaggcccaaaccctatatttattcgggctaaacgg 5494666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 24316677 - 24316511
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||| ||| ||||||| |||| |||||||||||||| | || ||||||| |||     
24316677 cgggctaccctcggcctgttcgggctagccctaacgggtagcggactttttaggaccgggctaaaaagccctattaaaattcagactcaatatttaaggc 24316578  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||||||||||||||| | |||||||||||| ||  |||||  |||  |||| ||||||||||||||    
24316577 ccaaaccctatatttagttgggctaaacgggccgacccatacagtctggcccattttgacagctcta 24316511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 7826924 - 7827092
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| |||||||||||||||||| |||| ||||| ||  ||||| ||||  ||||| |||| | ||||||||||||||||| ||||||| |||     
7826924 cgggctaccctcggcccgttcgggctagctctaacgggtagcgagctttttagggttgggctaaaaagcactattaaaattcgggctcaatatttaaggc 7827023  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctacc 230  Q
    |||| ||||||| ||| ||| |||||||||| ||| ||||| ||||| | |||||||||||||||||||    
7827024 ccaagccctataattaatcgagctaaacgggccggcccatacggtccggtccgttttgacagctctacc 7827092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 39048810 - 39048633
Alignment:
51 atgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggctta 150  Q
    |||||||||||||||||||||||||||||||||| |||||||||   |||||||| ||||| |||| |||||| |||||||||||||||||||||| | |    
39048810 atgcgggctaacgggctacccgcggcccgttcgg-ctagccctagcaggtaccgggctttttagggtcgggctaaaaaaccctattaaaattcgggttca 39048712  T
151 atattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    |||||| |||  ||| || |||| ||| |||||||||||||| | |  | || || || ||| ||||||||||||||||    
39048711 atatttaaggctcaagccatataattaatcgggctaaacgggccagcacgtaaggcccggcctgttttgacagctctac 39048633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 38062946 - 38063066
Alignment:
107 cttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggt 206  Q
    ||||||||||||||||| ||||  |||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||     
38062946 cttttaagggccgggct-aaaaggcctattaaaattcgagctcaatattttaggcccaaaccctatatttattcgggttaaacgggtcggtccatacggc 38063044  T
207 cctgcccgttttgacagctcta 228  Q
    || | || ||||||||||||||    
38063045 ccggtccattttgacagctcta 38063066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 41203305 - 41203444
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||  |||||| | || || ||||||||||| |||| ||||||||||||    ||    
41203305 gttatgcggactaacaggctacccgcggcccgttcgggctagccctaacaggtacccggctctttagggccgggctaaaaagccctattaaaat----gc 41203400  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||    
41203401 tcaatatttaaggcccaagccctataattaatcgggctaaacgg 41203444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 39089070 - 39088998
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccggg 121  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| || |||||| |||||||||||||||    
39089070 ttatgcgggctaacgggctacccgcggcccattcgggctagccctaacggataccgggcttttaagggccggg 39088998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 8321827 - 8321755
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgg 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||    
8321827 gttatgtgggctaacgggctacccgcggcccgttcgggctagccctaacgggtatcgggctttttagggccgg 8321755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 6286247 - 6286172
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggct 123  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||||    
6286247 gttatgcgggctaacggactacccgcggcccattcgggctagcccttacgggtaccgggcttttaagagccgggct 6286172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 19646925 - 19647014
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctatta 137  Q
    |||||| |||| | |||||||||| ||||||||| ||||||||||||| ||||| ||| ||||| ||||||||||| |||| ||||||||    
19646925 gttatgtgggccagcgggctaccctcggcccgtttgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctatta 19647014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 31878069 - 31878193
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    |||||| |||||||| |||||||||  || |||||||||| |||||| |||||||||  |||| |||  |||||| ||||||||||| |||||||| |||    
31878069 ttatgcaggctaacgagctacccgcaaccggttcgggctatccctaacgggtaccgggattttgaggatcgggctaaaaaaccctataaaaattcgagct 31878168  T
149 taatattttaggtccaaaccctata 173  Q
     ||||||| ||   |||||||||||    
31878169 caatatttaagactcaaaccctata 31878193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 39087786 - 39087644
Alignment:
85 gctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggc 184  Q
    ||||| ||||| | ||||||| ||||| ||| ||||| | |||| |||||||||||| || ||| ||||||| ||| |||||||||||| ||| || |||    
39087786 gctagtcctaacgagtaccgggctttttaggaccgggttaaaaagccctattaaaatccgagctcaatatttaaggcccaaaccctataattaatcaggc 39087687  T
185 taaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||  ||||||| ||||| || || |||| ||||||||||||||    
39087686 taattgggtcggcccatacgg-ccggccccttttgacagctcta 39087644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 9528662 - 9528744
Alignment:
108 ttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacg 190  Q
    |||| ||||||||||| | || ||||||||||||||||||| ||||||| |||||||| ||||||| ||| ||||| ||||||    
9528662 tttttagggccgggctaacaagccctattaaaattcgggctcaatatttaaggtccaagccctataattaatcgggttaaacg 9528744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 39754541 - 39754368
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| ||||| | | |||||| ||||||||| ||||||||||||| |||||  || | ||| ||| ||||||| |||| |||||||||||||| |||    
39754541 gttatgcaggctagcagactaccctcggcccgttagggctagccctaacgggtagagggccttttaggaccgggctaaaaagccctattaaaattcaggc 39754442  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | |       ||| |||| ||| ||| ||| |||||||||||||||| | || || || || |||||||||||||||||||    
39754441 tca-------aggcccaagcccaataattaatcgggctaaacgggtcagcccgtacggcccggcccgttttgacagctcta 39754368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 7726488 - 7726342
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||| ||| || |||| | ||||| |||||||| || ||||  |||||||||||| ||||| ||||||| ||| |||| | ||| | |||||||    
7726488 cgggctagccataacggatacctggctttttagggccggactaaaaagtcctattaaaatttgggctcaatatttaaggcccaagctctacaattattcg 7726389  T
182 ggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||| | |||| ||||||||  ||    |||||||||||||||||||    
7726388 ggcttatcgggccggtccattcgggttggcccgttttgacagctcta 7726342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 39088994 - 39088952
Alignment:
150 aatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
39088994 aatattttaggcccaagccctatatttattcgggctaaacggg 39088952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 5494795 - 5494758
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcggg 85  Q
    ||||||||| ||||||||||||||||||||| ||||||    
5494795 gttatgcggactaacgggctacccgcggcccattcggg 5494758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 6286177 - 6286128
Alignment:
143 cgggcttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    |||||| ||||||||||| |||| || ||||||||||||| |||||||||    
6286177 cgggctcaatattttaggcccaagccttatatttattcggactaaacggg 6286128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 9e-62; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 2702963 - 2703143
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || ||||||||||||||||| |||| ||||||||||||||||||    
2702963 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggc 2703062  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| |||||||||||||||||||||| ||| ||| ||||| || || |||||||||||||||||||    
2703063 tcaatattttaggcccaagccctatatttattcgggctaaatgggccggcccatacgggccggcccgttttgacagctcta 2703143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 17547642 - 17547462
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||  |||||||||||||||||    
17547642 gttatgcgggctaacgggctagccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagtcctattaaaattcgggc 17547543  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| | |||||||||||||||||||||||| ||| ||||| || || |||||||||||||||||||    
17547542 tcaatattttaggcccaagctctatatttattcgggctaaacgggccggcccatacgggccggcccgttttgacagctcta 17547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 29641012 - 29641190
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||||||||||||    
29641012 gttatgcgggccaacgggctacctgcggcccattcgggatagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggc 29641111  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctc 226  Q
    | ||||||||||| |||| |||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||    
29641112 tcaatattttaggcccaagccctatatttattcgggctaaacgggtcggcccatacgggccggcccgttttgacagctc 29641190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 4170901 - 4171054
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
4170901 gttatgcgggctaacgggctacccgcggcccattcaggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 4171000  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    | ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
4171001 tcaatattttaggcccaaaccctatatttattcgggctaaacgggccggcccat 4171054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 31511197 - 31511369
Alignment:
54 cgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaata 153  Q
    ||||||||||||||||||||||||| || ||| ||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||||||||||||| ||||    
31511197 cgggctaacgggctacccgcggcccatttgggatagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggctcaata 31511296  T
154 ttttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctc 226  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||    
31511297 ttttaggcccaagccctatatttattcgggctaaacgggtcggcccatacgggccggcccgttttgacagctc 31511369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 26555184 - 26555368
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
26555184 gttatgcgggctaactggctacccgcggcccattcgggctaaccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 26555283  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatg----gtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||  || |||||||    |||| |||||||||||||||||||    
26555284 tcaatattttaggcccaagccctatatttattcgggctaaacgggctggcccatatgggccgtccggcccgttttgacagctcta 26555368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 2067288 - 2067144
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
2067288 gttatgcggactaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 2067189  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||    
2067188 tcaatattttaggcccaagccctatatttattcgggctaaacggg 2067144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 227
Target Start/End: Original strand, 15183712 - 15183892
Alignment:
48 gttatgcgggctaacggg-ctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcggg 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||| |||| |||||||||||||||||    
15183712 gttatgcgggctaacggggctacccgcggcccgttcgggctagccctaacgggaaccgggcttttaaaggccgggctaaaaagccctattaaaattcggg 15183811  T
147 cttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctct 227  Q
    || ||||||||||| |||| |||||||||||||| ||| ||||||| ||| ||||| || || ||||||||||||||||||    
15183812 ctcaatattttaggcccaagccctatatttattctggcaaaacgggccggcccatacggcccggcccgttttgacagctct 15183892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 22988137 - 22988281
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||| || ||    
22988137 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaatccgagc 22988236  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | |||||||||||||||| ||||||||||||||||||||||||||    
22988237 tcaatattttaggtccaagccctatatttattcgggctaaacggg 22988281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 23800259 - 23800115
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||| || ||    
23800259 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaatccgagc 23800160  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | |||||||||||||||| ||||||||||||||||||||||||||    
23800159 tcaatattttaggtccaagccctatatttattcgggctaaacggg 23800115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 9035066 - 9035210
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||| ||| |||| ||||||||||||||||||    
9035066 gttatgcgggctaacgggctacccgcggcccattcgggatagccctaacgggtaccgggcttttaagggccgtgctaaaaagccctattaaaattcgggc 9035165  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||| |||| |||||||||| |||||||||||||||    
9035166 tcaatattttaggcccaagccctatatttgttcgggctaaacggg 9035210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 15067987 - 15068167
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||| |||||||||||| ||| || |||| |||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
15067987 gttatgcgggctaatgggctacccgcgacccatttgggcaagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 15068086  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | |||||||||||  ||| |||||||||||||| ||||||||||| ||  ||||| || || | |||||||||||||||||    
15068087 tcaatattttaggcacaagccctatatttattcaggctaaacgggccgacccatacgggccggtccgttttgacagctcta 15068167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 12577291 - 12577470
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||| ||||| ||||| |||| ||||||||||||||||||    
12577291 gttatgcgggctaacgggctacccgcggcc-gttcgggctagccctaacgggtaccaggctttttagggctgggctaaaaagccctattaaaattcgggc 12577389  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| |||||||| |||||||  || |||||||||||||| ||| || || || ||  || |||||||||||||||    
12577390 tcaatatttaaggtccaagccctataaataatcgggctaaacgggccggcccgtaaggcccgacctgttttgacagctcta 12577470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 189
Target Start/End: Original strand, 32897086 - 32897227
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| | ||||| |||| || |||||||||||||||    
32897086 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccggactttttaggactgggctaaaaagccttattaaaattcgggc 32897185  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaac 189  Q
    | ||||||| |||  ||| ||||||| ||| |||||||||||    
32897186 tcaatatttaaggctcaagccctataattaatcgggctaaac 32897227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 92 - 228
Target Start/End: Complemental strand, 34178539 - 34178403
Alignment:
92 ctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    |||| ||||||| | ||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||||||||||    
34178539 ctaacgggtaccaggcttttaagggccgggctaaaaagccctattaaaatttgggctcaatattttaggcccaagccctatatttattcgggctaaacgg 34178440  T
192 gtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||| ||||| || ||  ||||||||||||||||||    
34178439 gccggcccatacggcccgacccgttttgacagctcta 34178403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 29034472 - 29034583
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||| ||||||||||||||||||| ||||||| |||     
29034472 cgggctacccgcggcccgttcgggctagccctaatgggtaccgggctttttagggccgggctaaaaagccctattaaaattcgggctcaatatttaaggc 29034571  T
162 ccaaaccctata 173  Q
    |||| |||||||    
29034572 ccaagccctata 29034583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 13836065 - 13835884
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| |||||||||||||| | ||||||||| |||||||||||||| ||||| ||| ||||| ||||||||||| |||| |||||  |||||||||      
13836065 gttatgtgggctaacgggctatctgcggcccgtccgggctagccctaacgggtatcgggctttttagggccgggctaaaaagccctacgaaaattcggat 13835966  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    ||||||||| ||| |||| ||||||| ||| |||||||||||||||| | | ||| || ||  ||||||||||||| |||||    
13835965 ttaatatttaaggcccaagccctataattaatcgggctaaacgggtcagcctatacggcccgtcccgttttgacagttctac 13835884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 21036196 - 21036030
Alignment:
62 cgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggt 161  Q
    |||||||||| ||| |||||||||||||||||||  |||| | | ||||| | ||||||||| |||| ||||||||||||||||||| ||||||| |||     
21036196 cgggctaccctcggtccgttcgggctagccctaacaggtagcaggctttttaaggccgggctaaaaagccctattaaaattcgggctcaatatttaaggc 21036097  T
162 ccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||||| ||||||||| | |||||||||||| ||  |||||  |||  |||| ||||||||||||||    
21036096 ccaaactctatatttagttgggctaaacgggccgacccatacagtctggcccattttgacagctcta 21036030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 26483784 - 26483659
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||| | ||||||||||| ||||  ||||||| |||||||||||| || |||||||||||| ||||||||||| |||||||||||||||||| ||||    
26483784 gttatgcagtctaacgggctatccgcatcccgttcaggctagccctaacggataccggactttttagggccgggctaaaaaaccctattaaaattagggc 26483685  T
148 ttaatattttaggtccaaaccctata 173  Q
    | ||||||| |||  ||| |||||||    
26483684 tcaatatttaaggctcaagccctata 26483659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 13087817 - 13087706
Alignment:
117 ccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaa-ccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgt 215  Q
    ||||||| ||||  |||||||||||||||||| ||||||| ||| ||||| ||||||| ||| |||||||||||||  ||| ||||| || || | ||||    
13087817 ccgggctaaaaagtcctattaaaattcgggctcaatatttaaggcccaaagccctataattaatcgggctaaacggaccgg-ccatacggcccagtccgt 13087719  T
216 tttgacagctcta 228  Q
    |||||||||||||    
13087718 tttgacagctcta 13087706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 28985422 - 28985265
Alignment:
48 gttatgcgggctaacgggctacccgcggc---ccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcg 144  Q
    ||||||||||||||||||||||| |||||   || | |||||||||||||| | ||||||| ||||| ||||| ||||| |||| |||||| ||||| ||    
28985422 gttatgcgggctaacgggctaccggcggcggcccatacgggctagccctaacgtgtaccgggctttttagggcagggctaaaaagccctataaaaatccg 28985323  T
145 ggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccata 202  Q
     ||| || |||| ||| ||||  |||||| ||| || |||| || || |||| |||||    
28985322 tgctcaaaatttaaggcccaagtcctataattaatcaggcttaatggatcggcccata 28985265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 13087871 - 13087824
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaa 95  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||    
13087871 gttatgcaggctaatgggctacccgcggcctgttcgggctagccctaa 13087824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 2290038 - 2289979
Alignment:
76 cccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctat 135  Q
    ||||||| |||||||||||| ||||||||  ||||| ||||||||||| |||| ||||||    
2290038 cccgttcaggctagccctaacgggtaccgagctttttagggccgggctaaaaagccctat 2289979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 27767 - 27586
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||  |||| ||||||||||||||||||    
27767 gttatgcgggctaacgggctatccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggcgaaaaagccctattaaaattcgggc 27668  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||  ||||| ||||||||||||||||||||||||| ||| ||||| || || ||||||||||||||||||||    
27667 tcaatattttagacccaaatcctatatttattcgggctaaacgggccggcccatacggaccggcccgttttgacagctctac 27586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 40024 - 40205
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | ||||||||||||||||| |||| |||||||||||| |||||    
40024 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccaggcttttaagggccgggctaaaaagccctattaaaatacgggc 40123  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||||||| |||| |||||||||||||||||||||||||| |||  |||  || || ||||||||||||||||||||    
40124 tcaatattttaggcccaagccctatatttattcgggctaaacgggccggcacattcggcccagcccgttttgacagctctac 40205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 56374 - 56195
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||| |||| ||||||||||||||||||    
56374 gttatgcgggctaacgggctacctgcggcccgttcgggctagccctaacgggtaccgggattttaagggccgggctaaaaagccctattaaaattcgggc 56275  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||||||| || ||||||||||||||||||| |||||||| ||| ||||| || |  |||||||||||||||||||    
56274 tcaatattttagg-cccaaccctatatttattcgggataaacgggccggcccatacggcctggcccgttttgacagctcta 56195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 231673 - 231783
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||| | | ||||| ||||||||||| |||| ||||||||||||||||||| ||||||| ||| |||| | ||||| ||| |||    
231673 cgggctagccctaacgggtagcaggctttttagggccgggctaaaaagccctattaaaattcgggctcaatatttaaggcccaagctctataattaatcg 231772  T
182 ggctaaacggg 192  Q
    |||||||||||    
231773 ggctaaacggg 231783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 7751 - 7889
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
7751 gttatgcgggttaacgggctacccgcggcccattcgggcaagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggc 7850  T
148 ttaatattttaggtccaaaccctatatttattcgggcta 186  Q
    | ||||||||||| |||| ||||||||||||||||||||    
7851 tcaatattttaggcccaagccctatatttattcgggcta 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 1090 - 950
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| || | ||||||||||||||| ||    
1090 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaagagccctattaaaattcgagc 991  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaa 188  Q
    | ||||||||||| |||| ||||||||||||| ||||||||    
990 tcaatattttaggcccaagccctatatttatttgggctaaa 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 12770 - 12914
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || |||| | ||||||||||||| ||| |||| ||||||||||||||||||    
12770 gttatgcgggctaacgggctacccgcggcccattcgggctagccctaatggataccaggcttttaagggccgagctaaaaagccctattaaaattcgggc 12869  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    | ||||||||||  |||| ||||||||||||||||||||||||||    
12870 tcaatattttagacccaagccctatatttattcgggctaaacggg 12914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 39 - 192
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||| |||    
39 gttatgggggctaacgggctacccgcgacccattcaggctagccctaacgggtaccggacttttaagggccgggctaaaaattcctattaaaattcaggc 138  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccat 201  Q
    | ||||||||||  |||| || ||||||||||||||||||||||| ||| ||||    
139 tcaatattttagacccaatccttatatttattcgggctaaacgggccggcccat 192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 1534 - 1714
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||  |||| ||| ||||| ||||||||||| |||| ||| ||||||||||||||    
1534 gttatgcgggctagcgggctaccctcggcccgttcaggctagccctaacaggtagcgggctttttagggccgggctaaaaagcccaattaaaattcgggc 1633  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||| ||||| || ||  || |||||||||||||||    
1634 tcaatatttaaggcccaagccctataattaatcgggctaaacgggccggcccatacggcccgacctgttttgacagctcta 1714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 2317 - 2458
Alignment:
49 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggct 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || || |||||||| |  |||| |||||||||||||||||||    
2317 ttatgcgggctaacgggctacccgcggcccgttcgggctagccctaacgggtaccgggctatttagggccggacaaaaaagccctattaaaattcgggct 2416  T
149 taatattttaggtccaaaccctatatttattcgggctaaacg 190  Q
     ||||||| ||| |||| ||||||| ||| |||| |||||||    
2417 caatatttaaggcccaagccctataattaatcggcctaaacg 2458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 21970 - 22091
Alignment:
107 cttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggt 206  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||||  ||||| |      
21970 cttttaagggccgggctaaaaagccctattaaaattcgggctcaatattttaggcccaagccctatatttattcgggctaaatgggtcgtcccatacgtg 22069  T
207 cctgcccgttttgacagctcta 228  Q
    || |||||||||||||||||||    
22070 ccggcccgttttgacagctcta 22091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 2122 - 1976
Alignment:
82 cgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcg 181  Q
    |||||||||||||| ||||||||| ||| |||||| |||||| || | |||||||||||||||| || ||||||||||| |||| |||||||||||||||    
2122 cgggctagccctaacgggtaccgggcttataagggtcgggctaaatagccctattaaaattcggactcaatattttaggcccaagccctatatttattcg 2023  T
182 ggctaaacgggtcggtccatatggtcctgcccgttttgacagctcta 228  Q
    |||||||||||  || ||||| |  ||  ||||||||||||||||||    
2022 ggctaaacgggctggcccatacgacccgacccgttttgacagctcta 1976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 103079 - 103222
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||| ||| || |  |||||||||||||||||||| || || ||| ||||| ||||||||||| |||| ||||||||||||||||||    
103079 gttatgcgggctagcggactatcctcaacccgttcgggctagccctaacggatagcgggctttttagggccgggctaaaaagccctattaaaattcgggc 103178  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgg 191  Q
    | ||||||| | | |||||||||||| ||| |||||||||||||    
103179 tcaatatttaaagcccaaaccctataattaatcgggctaaacgg 103222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 2501 - 2379
Alignment:
107 cttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggt 206  Q
    ||||| ||||||||||| |||| ||||||||||||||||||| ||||||| |||||||| ||||||| ||| |||||||||||||| |||  |||  ||     
2501 cttttcagggccgggctaaaaagccctattaaaattcgggctcaatatttaaggtccaagccctataattaatcgggctaaacgggccggcacattcggc 2402  T
207 cctgcccgttttgacagctctac 229  Q
    || ||||||||||||||||||||    
2401 ccagcccgttttgacagctctac 2379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 9437 - 9315
Alignment:
107 cttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggt 206  Q
    ||||| ||||||||||| |||| ||||||||||||||||||| ||||||| |||||||| ||||||| ||| |||||||||||||| |||  |||  ||     
9437 cttttcagggccgggctaaaaagccctattaaaattcgggctcaatatttaaggtccaagccctataattaatcgggctaaacgggccggcacattcggc 9338  T
207 cctgcccgttttgacagctctac 229  Q
    || ||||||||||||||||||||    
9337 ccagcccgttttgacagctctac 9315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 2312 - 2201
Alignment:
117 ccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgtt 216  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||| |||| ||||||| ||| |||||||||| ||| ||| ||||| || ||  ||||||    
2312 ccgggctaaaaaaccctattaaaattcgggctcaatatttaaggcccaagccctataattaatcgggctaaatgggccggcccatacggccccacccgtt 2213  T
217 ttgacagctcta 228  Q
    |||||| |||||    
2212 ttgacaactcta 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 46006 - 45840
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||               ||| |||| || |||||||||||||||    
46006 gttatgcgggctatcgggcaacccgcggcccgttcgggctagccctaaagagtatcgg---------------gctaaaaatccatattaaaattcgggc 45922  T
148 ttaatattttaggtccaaaccctatatttattcgggctaaacgggtcggtccatatggtcctgcccgttttgacagctctac 229  Q
    | ||||||| ||| |||||||||||| ||| || |||||||| || ||| ||||| |  || ||||||||||||||||||||    
45921 tcaatatttaaggcccaaaccctataattaatcaggctaaacaggccggcccatacgtcccagcccgttttgacagctctac 45840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 1645 - 1541
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggtaccggacttttaagggccgggctgaaaaaccctattaaaattcgggc 147  Q
    |||||| ||||||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||| ||||||||| | ||||| ||||| |||||| ||||    
1645 gttatgtgggctaaagggctacccgcggcccgttagggctagacctaacgggtacc-gactttttagggccggg-ttaaaaaacctataaaaattagggc 1548  T
148 ttaatat 154  Q
    | |||||    
1547 tcaatat 1541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 125875 - 125964
Alignment:
103 cggacttttaagggccgggctgaaaaaccctattaaaattcgggcttaatattttaggtccaaaccctatatttattcgggctaaacggg 192  Q
    ||||||||| ||||||||||| |||| |||||||||||||| |||| ||||||| ||| |||  ||||||| ||| ||||||||||||||    
125875 cggactttttagggccgggctaaaaagccctattaaaattcaggctcaatatttaaggcccaggccctataattaatcgggctaaacggg 125964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 120949 - 121002
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaaagggta 101  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||| |||||    
120949 gttatgcgggctagcgggctaccatcggcccgttcgggttagccctaacgggta 121002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 51464 - 51417
Alignment:
48 gttatgcgggctaacgggctacccgcggcccgttcgggctagccctaa 95  Q
    ||||||||||||| |||||||||| | |||||||| ||||||||||||    
51464 gttatgcgggctagcgggctaccctcagcccgttcaggctagccctaa 51417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University