View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6131_high_2 (Length: 1040)
Name: NF6131_high_2
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6131_high_2 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 899; Significance: 0; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 899; E-Value: 0
Query Start/End: Original strand, 13 - 1024
Target Start/End: Complemental strand, 30385201 - 30384170
Alignment:
| Q |
13 |
agcataggtcggtgaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcga |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30385201 |
agcataggtcggtgaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcga |
30385102 |
T |
|
| Q |
113 |
ggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcacccc |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30385101 |
ggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccaaaaaatctttcaggattgaacattttagcatcatcacccc |
30385002 |
T |
|
| Q |
213 |
atagttcgcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcg |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30385001 |
atagttcgcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcg |
30384902 |
T |
|
| Q |
313 |
agcaaggccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagattaatgttacatgttaaggccaagcaaca |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384901 |
agcaaggccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagattaatgttacatgttaaggccaagcaaca |
30384802 |
T |
|
| Q |
413 |
aaatagtctcgataaacaacaaaaccagtttgtcttgaggcttatactgaatacaagattagtgttagtatttccggacaaaagatgcaactgttgatta |
512 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
30384801 |
aaaaagtctcgataaacaacaaaaccagtttgtcttgaggcttatagtgaatacaagattagtgttagaatttccggacaaaagatgcaactcttgatta |
30384702 |
T |
|
| Q |
513 |
aaattctacgaaaatgcaactc--------------------atacaacaatacttacgatctttaggttatttagcccatcaaaatctggttttctgtt |
592 |
Q |
| |
|
|||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384701 |
aaattctacgaaaatgaaactcatatcatgagtgtgaagataataaaacaatacttacgatctttaggttatttagcccatcaaaatctggttttctgtt |
30384602 |
T |
|
| Q |
593 |
gccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttt |
692 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |
|
|
| T |
30384601 |
gccaaagacatgtaacacttcctcccttgcacgggtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaaccgaagtagtctct |
30384502 |
T |
|
| Q |
693 |
tgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttg |
792 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384501 |
tgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttg |
30384402 |
T |
|
| Q |
793 |
actcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcgaagaggttatttc |
892 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384401 |
actcaagaagaatgctcaataagtcattcctagtgggctcacctgcctttaatgctttttccctcttgttaatcatatctttaagcgaagaggttatttc |
30384302 |
T |
|
| Q |
893 |
tttgtcgattttattcatccttctatggacaattgtaggtaaaaacctacaaacaaaaatgttgaaataacgacagaaattagagaccggagaattgtta |
992 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
30384301 |
tttgtcgattttattcatctttctatggacaattgtaggcaaaaacctacaaacaaaaatgttgaaataatgacggaaattagagaccggagaattgtta |
30384202 |
T |
|
| Q |
993 |
tacttagtaataaaagaaaggaagtccagagt |
1024 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
30384201 |
tacttagtaataaaagaaaggaagtccagagt |
30384170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 544 - 979
Target Start/End: Complemental strand, 30395084 - 30394648
Alignment:
| Q |
544 |
tacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggta |
643 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30395084 |
tacttacaatctttaggttatttagcccatcaaaatctggttttttgttgccaaagacatgtaacacttcctccctagcacgtgtttgccaatcagggta |
30394985 |
T |
|
| Q |
644 |
cctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactc |
743 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||| | ||| |||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30394984 |
cctactcaacaatatcattgtccaaacaagcaaaaccgaagtagtttcttgccctgcaaaatggaacaacttgcattcctcgactacatgatcaagactc |
30394885 |
T |
|
| Q |
744 |
attcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgccttta |
843 |
Q |
| |
|
||||| ||| ||| ||||| | || | ||||||||||| ||||||| ||||||||||| ||||||||||||||| || ||| ||||| ||||||| |
|
|
| T |
30394884 |
attccaacactcttattgttgttgttattttcaatttccttatgatttgattcaagaagaatactcaataagtcattcttagtggattcaccagccttta |
30394785 |
T |
|
| Q |
844 |
atgctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcgattttattcatccttctatggacaattgtaggtaaaaacctaca |
943 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||| |||| | |||| | |||||||| |
|
|
| T |
30394784 |
attctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcaatttcattcatcttcctatgcacaaatataggcagaaacctacg |
30394685 |
T |
|
| Q |
944 |
aac-aaaaatgttgaaataacgacagaaattagagac |
979 |
Q |
| |
|
||| |||||||||| ||||| ||| ||||||||||| |
|
|
| T |
30394684 |
aacaaaaaatgttgcaataatcacataaattagagac |
30394648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 13 - 393
Target Start/End: Complemental strand, 30395953 - 30395573
Alignment:
| Q |
13 |
agcataggtcggtgaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcga |
112 |
Q |
| |
|
||||||||| | |||||||||||||| |||||||||||||||| || || |||||| |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30395953 |
agcataggttgaggaaagttcaaatgaaaaatgttgcaaaatcattgacaatgccatctttgcttccattagggaaaagttttgtccaatgcaaattctt |
30395854 |
T |
|
| Q |
113 |
ggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcacccc |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
30395853 |
ggaccccatccaaatggaaaaaatgaaactctaccatttgttgctttagaaattcctccggaaaatctctcaggattgaacattttagcatcatcgcccc |
30395754 |
T |
|
| Q |
213 |
atagttcgcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcg |
312 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||| ||||||| ||||||||| |
|
|
| T |
30395753 |
atagtttgcagtcatgatgaatcaaaagaattggtaagaaaacctccactccagcaggtaatgtcaggtttccaagtttcatatctttcacaacatttct |
30395654 |
T |
|
| Q |
313 |
agcaaggccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagattaatgttac |
393 |
Q |
| |
|
|||||| || ||||| ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
30395653 |
agcaagtcccattactggagggtataatctaagaacctcatacaaaatcatggtgacctgttacaaaaagatttatgttac |
30395573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 26 - 381
Target Start/End: Complemental strand, 30437761 - 30437406
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
|||||||| ||||||||| |||| ||||||| || || ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| ||||| |
|
|
| T |
30437761 |
gaaagttcgaatgagaaacgttgtaaaatcattgctatcgccatctttgcttccaacatagaaaagttctgtccaatgcaaattctaggaccccctccaa |
30437662 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtc |
225 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| ||| ||| |||||||||| ||||||||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
30437661 |
atggaacaaatgaatttcttccatttgttgctttcaaaacaccttcagaaaatctctcaggattgaacaccttagcatcgtcaccccatagttcggagtc |
30437562 |
T |
|
| Q |
226 |
atggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggccaatt |
325 |
Q |
| |
|
|||||||| |||| || |||||| ||| | |||||| ||||||| |||||| |||||||||||||||||||| | |||| |||||||||| | ||| |
|
|
| T |
30437561 |
atggtgaactaaaactatcggtaaggtaatttgcactccggcaggtaatgttaggtttccaagtttcacatctttgtgaacacttcgagcaagttcgatt |
30437462 |
T |
|
| Q |
326 |
acgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaa |
381 |
Q |
| |
|
|| || |||||||||||||||||||| ||||||||||| ||||||| || |||||| |
|
|
| T |
30437461 |
actggtgggtataacctaagaacctcgtacaaaatcatcgtgacctgtctcaaaaa |
30437406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 26 - 371
Target Start/End: Complemental strand, 30476713 - 30476368
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
||||||||||||||||| | || ||||||| || ||||||||| |||||||||| | ||||| ||||||||||||||||||| ||||||| ||||| |
|
|
| T |
30476713 |
gaaagttcaaatgagaatttttttaaaatcattgccattgccatctttgcttccaacatggaaaaattttgtccaatgcaaattcttggaccccctccaa |
30476614 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtc |
225 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
30476613 |
atggaaaaaatgaaaatctcccatttgttgctttggaaattcctccagaaaatctctcaggattgaacaccttagcatcttcaccccatagttcggagtc |
30476514 |
T |
|
| Q |
226 |
atggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggc-caat |
324 |
Q |
| |
|
|||||||| ||||| || |||||| ||| | |||||| || |||| |||||| ||||||||||| |||||||| | | | |||||| ||| | | || |
|
|
| T |
30476513 |
atggtgaaccaaaactatcggtaaggtaatttgcactccggctggtaatgttaggtttccaagtttgacatctttgtgagtacttcgag-aagtcgcgat |
30476415 |
T |
|
| Q |
325 |
tacgggagggtataacctaagaacctcatacaaaatcatggtgacct |
371 |
Q |
| |
|
| |||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30476414 |
tgcgggtgggtataatctaagaacctcatacaaaatcatggtgacct |
30476368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 26 - 365
Target Start/End: Original strand, 23783274 - 23783613
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
|||||||||||||| |||| | |||||||||| ||||||||| |||||||||| || |||||||||||||||||||| |||| ||||||| ||||| |
|
|
| T |
23783274 |
gaaagttcaaatgaaaaattctttaaaatcaatgccattgccatctttgcttccaacagggaaaagttttgtccaatgcagattctaggacccgctccaa |
23783373 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtc |
225 |
Q |
| |
|
| |||||| |||||| ||| || |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||| || || |
|
|
| T |
23783374 |
acggaaaatatgaaaatctaccgtttgttgctttggaaattccaccagaaaatctctcaggattgaaaatcttagcatcatcaccccatagttcacaatc |
23783473 |
T |
|
| Q |
226 |
atggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggccaatt |
325 |
Q |
| |
|
|||||||||||||| |||||| | | ||| ||||| ||||||| || ||| | | ||||||||| | ||| |||||||| |||||||||| ||| || |
|
|
| T |
23783474 |
atggtgaatcaaaacaattggcatgtaaacctccattccagcatataatgtcaagtctccaagttttatatcattctcaacttttcgagcaacgccggtt |
23783573 |
T |
|
| Q |
326 |
acgggagggtataacctaagaacctcatacaaaatcatgg |
365 |
Q |
| |
|
|| |||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
23783574 |
acaggagggtacaacctcaaaacctcatacaaaatcatgg |
23783613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 13 - 385
Target Start/End: Complemental strand, 30484904 - 30484532
Alignment:
| Q |
13 |
agcataggtcggtgaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcga |
112 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||||||||| |||||||| |||||||||| | ||||||||||||||||| ||||||| | |
|
|
| T |
30484904 |
agcataggttggagaaagttcaaatgagaaatgctgcaaaatcaatgttattgccatctttgcttccaacatggaaaagttttgtccaatacaaattcta |
30484805 |
T |
|
| Q |
113 |
ggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcacccc |
212 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||||||| |||| |||| | | |||||| ||||||||||||| |||||||| ||||||| |
|
|
| T |
30484804 |
ggaccccctccaaatggaaaaaatgaatttctaccatttgttgcttttgaaactccttctgcaaatctctcaggattgaacaccttagcatcttcacccc |
30484705 |
T |
|
| Q |
213 |
atagttcgcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcg |
312 |
Q |
| |
|
||||||| || ||||||||| ||| ||||||||| ||||| ||||| ||||||| |||||| ||||||| ||| || ||||| | || ||| |
|
|
| T |
30484704 |
atagttcatggttgtggtgaatccaaactattggtaaggtaatctggactccggcaggtaatgttaggtttccaacttttacgtctttgtgaatggctcg |
30484605 |
T |
|
| Q |
313 |
agcaaggccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagatt |
385 |
Q |
| |
|
|| ||| | ||| || ||||||||||| ||||||||||||||||||||||| | || ||||||||||||| |
|
|
| T |
30484604 |
aggaagcacggttattggtgggtataaccttagaacctcatacaaaatcatggtcatctgtcacaaaaagatt |
30484532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 26 - 381
Target Start/End: Complemental strand, 30469572 - 30469217
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| || |||||||| |||||||||| | |||||||| |||||||||||||||| |||||||| | ||| |
|
|
| T |
30469572 |
gaaagttcaaatgagaaacgttgtaaaatcattgctattgccatctttgcttccaacatggaaaagttctgtccaatgcaaattctaggaccccctgcaa |
30469473 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtc |
225 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| ||| ||| |||||||||| || |||||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
30469472 |
atggaaaaaatgaatttcttccattggttgcttttaaaacaccttcagaaaatctctcgggattgaacaccttagcatcttcaccccatagttctatgtc |
30469373 |
T |
|
| Q |
226 |
atggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggccaatt |
325 |
Q |
| |
|
|||||||| || || || | |||||||| || |||||| || || | || ||| ||||||||||| |||||||| | ||| |||||||||| | ||| |
|
|
| T |
30469372 |
atggtgaaccataattatcgataagaaaacctgcactccggctggcaatgctaggtttccaagtttaacatctttgtgaactcttcgagcaagtgcgatt |
30469273 |
T |
|
| Q |
326 |
acgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaa |
381 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
30469272 |
actggtgggtataacctaagaacctcatacaaaatcatggtgacctgtctcaaaaa |
30469217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 26 - 364
Target Start/End: Complemental strand, 23768808 - 23768470
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
|||||||||||||| |||| || |||||||||| ||||||||| |||||||||| |||||||||| | ||||||||||| |||| |||||| ||||| |
|
|
| T |
23768808 |
gaaagttcaaatgaaaaattctgtaaaatcaatgccattgccatctttgcttccaatagagaaaaggtctgtccaatgcagattctaggacctgctccaa |
23768709 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtc |
225 |
Q |
| |
|
| |||||| |||||| ||| || |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||| || || |
|
|
| T |
23768708 |
acggaaaatatgaaaatctaccgtttgttgctttggaaattccaccagaaaatctctcaggattgaaaatcttagcatcatcaccccatagttcacaatc |
23768609 |
T |
|
| Q |
226 |
atggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggccaatt |
325 |
Q |
| |
|
|||||||||||||| ||| || ||| ||| |||| ||||||| || ||| | | ||||||||| | ||| |||||||| ||||||| || ||| || |
|
|
| T |
23768608 |
atggtgaatcaaaacaatcggcaagtaaacatccattccagcatataatgtcaagtctccaagttttatatcattctcaacttttcgagaaacgccggtt |
23768509 |
T |
|
| Q |
326 |
acgggagggtataacctaagaacctcatacaaaatcatg |
364 |
Q |
| |
|
| |||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
23768508 |
ataggagggtacaacctcaaaacctcatacaaaatcatg |
23768470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 30425459 - 30425128
Alignment:
| Q |
40 |
gaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaaatggaaaaaatgaa |
139 |
Q |
| |
|
|||| |||| ||||||| || |||||||| |||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
30425459 |
gaaacgttgtaaaatcattgctattgccatctttgcttccaacatagaaaagttttgtccaatgcaaattctaggaccccctccaaatggaaaaaatgaa |
30425360 |
T |
|
| Q |
140 |
actcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtcatggtgaatcaaaa |
239 |
Q |
| |
|
|||||||||||||||||| ||| ||| | |||||||| || |||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
30425359 |
tttcttccatttgttgcttttaaaacaccttctgaaaatctctcgggattgaacaccttagcatcatcaccccatagttctatgtcatggtgaaccaaaa |
30425260 |
T |
|
| Q |
240 |
gaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggccaattacgggagggtataa |
339 |
Q |
| |
|
|| | |||||||| || |||||| || || | || ||| ||||||||| |||||||||| | |||| |||||||||| | ||| | || |||||||| |
|
|
| T |
30425259 |
ttatcgataagaaaacctgcactccggctggcaatgctaggtttccaagtatcacatctttgtgaacacttcgagcaagcgcgattgctggtgggtataa |
30425160 |
T |
|
| Q |
340 |
cctaagaacctcatacaaaatcatggtgacct |
371 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||| |
|
|
| T |
30425159 |
cctaagaacctcgtacaaaatcatagtgacct |
30425128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 26 - 371
Target Start/End: Complemental strand, 30431506 - 30431161
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| || |||||||| |||||||||| | ||||||||||||||||| ||||||| |||||||| | ||| |
|
|
| T |
30431506 |
gaaagttcaaatgagaaacgttgtaaaatcattgctattgccatctttgcttccaacatggaaaagttttgtccaattcaaattctaggacccccttcaa |
30431407 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtc |
225 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| ||| ||| | |||||||| || |||||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
30431406 |
atggaataaatgaatttcttccatttgttgcttttaaaacaccttctgaaaatctctcgggattgaacaccttagcatcttcaccccatagttctatgtc |
30431307 |
T |
|
| Q |
226 |
atggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcgagcaaggccaatt |
325 |
Q |
| |
|
|||||||| ||||| || | |||||||| || |||||| ||||||| |||||| ||||||||| ||| |||||| | | || |||||| ||| | ||| |
|
|
| T |
30431306 |
atggtgaaccaaaattatcgataagaaaacctgcactcctgcaggtaatgttaggtttccaagtgtcatatctttgtgatcacttcgagtaagcgcgatt |
30431207 |
T |
|
| Q |
326 |
acgggagggtataacctaagaacctcatacaaaatcatggtgacct |
371 |
Q |
| |
|
| || |||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
30431206 |
tctggtgggtataacctaagaacctcgtacaaaatcatagtgacct |
30431161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 8378905 - 8379277
Alignment:
| Q |
13 |
agcataggtcggtgaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcga |
112 |
Q |
| |
|
||||||||| || ||||||||||| |||||| ||| ||||||| || || |||||| |||||||||| ||| |||||||||||||| ||||||| || | |
|
|
| T |
8378905 |
agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaagttttgtcccatgcaaactcta |
8379004 |
T |
|
| Q |
113 |
ggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcacccc |
212 |
Q |
| |
|
||||||| ||||||||||||| || || ||| |||||||||||||||||||||||| ||| |||||| |||||||||||||| || ||||||||||||| |
|
|
| T |
8379005 |
ggaccccctccaaatggaaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc |
8379104 |
T |
|
| Q |
213 |
atagttcgcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcg |
312 |
Q |
| |
|
||||||| || ||| |||| ||||| |||||||||||||| |||||||||||||||| | | ||||||| || | ||||| |||||| ||| |
|
|
| T |
8379105 |
atagttcattgttatgttgaagcaaaataattggtaagaaaacttccactccagcaggtacttccatgtttccaaactttatgtctttgccaacatatcg |
8379204 |
T |
|
| Q |
313 |
agcaaggccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaagatt |
385 |
Q |
| |
|
|| || |||| | | || || || ||||| |||||||||||||||||||| | || || ||||||||||||| |
|
|
| T |
8379205 |
agtaacaccaaatgctggtggatacaaccttagaacctcatacaaaatcatagggagctgtcacaaaaagatt |
8379277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 542 - 880
Target Start/End: Complemental strand, 30425059 - 30424721
Alignment:
| Q |
542 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
641 |
Q |
| |
|
||||||||||||||| || | | ||||||| ||||| || ||||| |||||||||| || ||||| ||||| ||||| |||||| ||||||||||||| |
|
|
| T |
30425059 |
aatacttacgatcttaagatgacttagcccgtcaaagtcaggtttattgttgccaaaaacttgtaatacttcttcccttgcacgttcttgccaatcaggg |
30424960 |
T |
|
| Q |
642 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
741 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| | |||||||||||| | |||||||||||||| |
|
|
| T |
30424959 |
tacctactcaacaacaccattgtccaaacaagcaaaacagaagtggtctcttggcctgcaaagtagaagagcttgcattcctctattacatcatcaagac |
30424860 |
T |
|
| Q |
742 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
841 |
Q |
| |
|
||||||| |||| ||| ||||| | | ||| || ||||| ||| |||||||||| | ||| || | |||||||||| | || ||| ||||||||||| |
|
|
| T |
30424859 |
tcattccaacattcttattgttgccgtgttcttccatttctttgtgatttgactctaaaagtatacctaataagtcatccttagtggcttcacctgcctt |
30424760 |
T |
|
| Q |
842 |
taatgctttctccctcttgttaatcatatctttaagcga |
880 |
Q |
| |
|
|| |||| | || |||||||||||||||||| ||||||| |
|
|
| T |
30424759 |
tagtgctctttctctcttgttaatcatatctgtaagcga |
30424721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 540 - 882
Target Start/End: Complemental strand, 30469160 - 30468818
Alignment:
| Q |
540 |
acaatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcag |
639 |
Q |
| |
|
||||||||||| ||||| || | | ||||||| |||||||| ||||| ||||||||||||| ||||| ||||| ||||| ||||| | ||||||||| | |
|
|
| T |
30469160 |
acaatacttacaatcttaagatgacttagcccgtcaaaatcaggtttattgttgccaaagacctgtaatacttcttcccttgcacgcgcttgccaatcgg |
30469061 |
T |
|
| Q |
640 |
ggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaag |
739 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| | |||||||||||| | ||||||||||| |
|
|
| T |
30469060 |
ggtacctactcaataacaccattgtccaaacaagcaaaacagaagtggtctcttggcctgcaaagtagaatagcttgcattcctctatcacatcatcaag |
30468961 |
T |
|
| Q |
740 |
actcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcc |
839 |
Q |
| |
|
||||||||| |||||||| ||||| ||| ||| || ||||| ||| |||||||||| | ||| || | || || |||| | || | | ||||||||| |
|
|
| T |
30468960 |
actcattccgacatccttattgttgccatgttcttccatttctttgtgatttgactctaaaagtatacctaacaaatcatccttagttgcttcacctgcc |
30468861 |
T |
|
| Q |
840 |
tttaatgctttctccctcttgttaatcatatctttaagcgaag |
882 |
Q |
| |
|
|||| |||| | || || ||||||||||||||| ||||||||| |
|
|
| T |
30468860 |
tttagtgctctttctctgttgttaatcatatctgtaagcgaag |
30468818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 543 - 871
Target Start/End: Complemental strand, 30484080 - 30483752
Alignment:
| Q |
543 |
atacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggt |
642 |
Q |
| |
|
|||||||| ||||| || | ||||| || ||||||||||||| | |||||||||| || |||| ||||||||| || ||||||| |||||||| ||||| |
|
|
| T |
30484080 |
atacttacaatcttaagatggtttagtccttcaaaatctggttgtttgttgccaaaaacttgtagcacttcctctcttgcacgtgcttgccaattagggt |
30483981 |
T |
|
| Q |
643 |
acctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagact |
742 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| || | || ||||||| || ||| | ||||||||||| || ||||||||||||| | |
|
|
| T |
30483980 |
gcctactcaataatacaattgtccaaacaagcaaaactgaagtggtttcttcccctgcaaggtagaatagcttgcattccttgattacatcatcaagatt |
30483881 |
T |
|
| Q |
743 |
cattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgccttt |
842 |
Q |
| |
|
|||||| |||| ||| ||||| | || || | |||||||||| ||||||||||||||||||| | |||||||||||| || ||| |||||||||||| |
|
|
| T |
30483880 |
cattccaacattcttattgttgttgttatctttaatttccttgtgatttgactcaagaagaatacctaataagtcattcttagtggcttcacctgccttt |
30483781 |
T |
|
| Q |
843 |
aatgctttctccctcttgttaatcatatc |
871 |
Q |
| |
|
| | || | || ||||||||||| ||||| |
|
|
| T |
30483780 |
atttctctttctctcttgttaataatatc |
30483752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 540 - 882
Target Start/End: Complemental strand, 30437349 - 30437007
Alignment:
| Q |
540 |
acaatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcag |
639 |
Q |
| |
|
||||||||||| ||||| || | | |||||||||||||||| ||||| |||||||||| || ||||| ||||||||||| ||||||| ||||||||||| |
|
|
| T |
30437349 |
acaatacttacaatcttaagatgacttagcccatcaaaatcgggtttattgttgccaaatacttgtaatacttcctcccttgcacgtgcttgccaatcag |
30437250 |
T |
|
| Q |
640 |
ggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaag |
739 |
Q |
| |
|
||||||||||||| || | |||||||||||||||||||| ||||| |||| | ||||||||||| ||| | |||||||||||| | |||||| ||||| |
|
|
| T |
30437249 |
ggtacctactcaacaacactattgtccaaacaagcaaaacagaagttgtctctgcacctgcaaagtagaatagcttgcattcctctattacatcgtcaag |
30437150 |
T |
|
| Q |
740 |
actcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcc |
839 |
Q |
| |
|
||||||||| |||| ||| ||||| |||| ||| || ||||| ||| |||||||||| | ||| || | || || |||| | | | | ||||||||| |
|
|
| T |
30437149 |
actcattccaacattcttattgttgtcatgttcttccatttctttgtgatttgactctaaaagtatacctaacaaatcatcctttgttgcttcacctgcc |
30437050 |
T |
|
| Q |
840 |
tttaatgctttctccctcttgttaatcatatctttaagcgaag |
882 |
Q |
| |
|
||| |||| |||| ||| |||||||||||||| ||||||||| |
|
|
| T |
30437049 |
attagtgctctctctctcgtgttaatcatatctgtaagcgaag |
30437007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 541 - 920
Target Start/End: Complemental strand, 30476121 - 30475742
Alignment:
| Q |
541 |
caatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagg |
640 |
Q |
| |
|
|||||||||| ||||| || | ||||| |||||||||||||||||| | ||||| ||||| || || ||||||||||| ||||| | |||||||||||| |
|
|
| T |
30476121 |
caatacttacaatcttaagttggtttagtccatcaaaatctggttttttattgccgaagacttgcaatacttcctcccttgcacgagcttgccaatcagg |
30476022 |
T |
|
| Q |
641 |
gtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaaga |
740 |
Q |
| |
|
||||||||||| || ||||||| ||||||||||||||| ||||| |||| ||| |||||||||| ||| | ||||||||| || | |||||| |||||| |
|
|
| T |
30476021 |
atacctactcaacaacatcattgcccaaacaagcaaaacagaagtggtctcttgccctgcaaagtagaatagcttgcattcttctattacatcgtcaaga |
30475922 |
T |
|
| Q |
741 |
ctcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcct |
840 |
Q |
| |
|
|||||||| |||||||| ||||| || | ||| || ||||| ||| |||| |||| | ||| || | ||||| |||| | || | | ||||| |||| |
|
|
| T |
30475921 |
ctcattccgacatccttattgttgtcgtgttcttccatttctttgtgattcaactccaaaagtatacctaataaatcatccttagttgcttcacccgcct |
30475822 |
T |
|
| Q |
841 |
ttaatgctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcgattttattcatccttctatgg |
920 |
Q |
| |
|
||| ||| |||| ||||||||||||||||| |||| |||| |||||||| |||| |||| |||||||| |||||| |
|
|
| T |
30475821 |
ttagtgcgatctctctcttgttaatcatatcagtaagtgaagcttttatttctctgtcaatttccttcatcctcctatgg |
30475742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 542 - 764
Target Start/End: Original strand, 8379527 - 8379749
Alignment:
| Q |
542 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
641 |
Q |
| |
|
||||||||| ||||| || |||||||| || ||| | ||||||||| |||||||||| | ||||| ||||||||||| |||||| ||||||||||||| |
|
|
| T |
8379527 |
aatacttacaatcttaagtttatttagtccttcatagtctggttttttgttgccaaatatttgtaatacttcctccctagcacgttcttgccaatcaggg |
8379626 |
T |
|
| Q |
642 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
741 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| | |||||||| | ||| ||||| |||| ||| |||||||||||| | |||||||| ||||||| |
|
|
| T |
8379627 |
tacctactcaacaatatcattgtccaaacaagcatagttgaagtagattcttgccctgccaagtagaataacttgcattcccccactacatcttcaagac |
8379726 |
T |
|
| Q |
742 |
tcattcccacatccttgttgttt |
764 |
Q |
| |
|
||||||||| || |||||||||| |
|
|
| T |
8379727 |
tcattcccatattcttgttgttt |
8379749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 542 - 880
Target Start/End: Complemental strand, 30431092 - 30430754
Alignment:
| Q |
542 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
641 |
Q |
| |
|
||||||||||||||| || | | ||||||| ||||| |||||||| |||||||||| || ||||| ||||| ||||| |||||| ||||||||| || |
|
|
| T |
30431092 |
aatacttacgatcttaagatgacttagcccgtcaaattctggtttattgttgccaaatacttgtaatacttcttcccttgcacgttcttgccaatctggt |
30430993 |
T |
|
| Q |
642 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
741 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| | |||||||||||| | |||||||||||||| |
|
|
| T |
30430992 |
tacctactcaacaacaccattgtccaaacaagcaaaacagaagtggtctcttgtcctgcaaagtagaagagcttgcattcctctattacatcatcaagac |
30430893 |
T |
|
| Q |
742 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
841 |
Q |
| |
|
||||||| |||| ||| ||||| | | ||| || ||||| || |||||||||| | ||| || | |||||||||| | || | | | |||||| || |
|
|
| T |
30430892 |
tcattccaacattcttattgttgccttgttcttccatttctttttgatttgactctaaaagtatacctaataagtcatccttagttgctttacctgcttt |
30430793 |
T |
|
| Q |
842 |
taatgctttctccctcttgttaatcatatctttaagcga |
880 |
Q |
| |
|
|| |||| | || ||||||||||| |||||| ||||||| |
|
|
| T |
30430792 |
tagtgctctttctctcttgttaattatatctgtaagcga |
30430754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 542 - 870
Target Start/End: Complemental strand, 23768360 - 23768032
Alignment:
| Q |
542 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
641 |
Q |
| |
|
||||||||| ||||| || |||||||| |||||||| ||||||||| |||||||| | | ||| ||||||| || |||||| ||||||||| ||| |
|
|
| T |
23768360 |
aatacttacaatcttaagtttatttagtccatcaaagtctggtttttcattgccaaatatctctaatacttccttccgggcacgttcttgccaatctggg |
23768261 |
T |
|
| Q |
642 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
741 |
Q |
| |
|
| ||||||||| || | ||| ||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| |||||||| ||||||| || ||||||| |
|
|
| T |
23768260 |
tgcctactcaacaacaccatcgtccaaacaagcaaatctgaagtagtctcttgccctgcaatatggaataacatgcattccccgactacttcttcaagac |
23768161 |
T |
|
| Q |
742 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
841 |
Q |
| |
|
||| ||||| || |||| |||| ||| ||| | |||||| ||| | || ||||| || || | | |||||||||||| | ||| ||||||||||| |
|
|
| T |
23768160 |
tcaatcccatattcttgaagtttccatgttctttaatttctttgtggttcgactctaggaggagacctaataagtcattctcagtggcttcacctgcctt |
23768061 |
T |
|
| Q |
842 |
taatgctttctccctcttgttaatcatat |
870 |
Q |
| |
|
|| ||||||||||||||||||||| |||| |
|
|
| T |
23768060 |
tattgctttctccctcttgttaattatat |
23768032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 542 - 870
Target Start/End: Original strand, 23783711 - 23784039
Alignment:
| Q |
542 |
aatacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcaggg |
641 |
Q |
| |
|
||||||||| ||||| || |||||||| |||||||| || |||||| |||||||| | | ||| ||||||| ||| |||||| ||||||||||||| |
|
|
| T |
23783711 |
aatacttacaatcttaagtttatttagtccatcaaagtcgggtttttcattgccaaatatctctaatacttccttccttgcacgttcttgccaatcaggg |
23783810 |
T |
|
| Q |
642 |
tacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagac |
741 |
Q |
| |
|
||||||||||| || | ||| ||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| |||||||| ||||||| || ||||||| |
|
|
| T |
23783811 |
tacctactcaacaacaccatcgtccaaacaagcaaatctgaagtagtctcttgccctgcaacatggaataacctgcattccccgactacttcttcaagac |
23783910 |
T |
|
| Q |
742 |
tcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctt |
841 |
Q |
| |
|
||| ||||| || |||| |||| ||| ||| | |||||| || | || ||||| || || | | |||||||||||| | ||| ||||||||||| |
|
|
| T |
23783911 |
tcaatcccatattcttgacgtttccatgttctttaatttctctgtggttcgactctaggaggagacctaataagtcattctcagtggcttcacctgcctt |
23784010 |
T |
|
| Q |
842 |
taatgctttctccctcttgttaatcatat |
870 |
Q |
| |
|
| |||||| |||||||||||||| |||| |
|
|
| T |
23784011 |
aattgctttttccctcttgttaattatat |
23784039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 609 - 682
Target Start/End: Complemental strand, 30403983 - 30403910
Alignment:
| Q |
609 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactga |
682 |
Q |
| |
|
|||||||| || || |||| |||||||||||| || |||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
30403983 |
acttcctctctagctcgtgcttgccaatcaggatatctactcaacaatatcattgtccaaacaagcagaactga |
30403910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 13 - 381
Target Start/End: Original strand, 41626754 - 41627122
Alignment:
| Q |
13 |
agcataggtcggtgaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcga |
112 |
Q |
| |
|
|||||||| || ||||||| |||||||||||| || |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| || | | |
|
|
| T |
41626754 |
agcataggctggagaaagttgaaatgagaaatgctgtaaaatcaatgtcattgccatctttgcttccaatagagaaaagttttgcccaatgcagatccta |
41626853 |
T |
|
| Q |
113 |
ggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcacccc |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41626854 |
ggaccccatccaaatggaaaaaatgaaactctaccgttcgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcacccc |
41626953 |
T |
|
| Q |
213 |
atagttcgcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggtagtgttagatttccaagtttcacatctttctcaacatttcg |
312 |
Q |
| |
|
||| ||| || |||||||| | ||| | |||||| | ||||| |||||||||||||| || |||||| |||||||||||||||| ||| ||||| ||||| |
|
|
| T |
41626954 |
ataattcacaatcatggtgcaacaatataattggcatgaaaacctccactccagcagataatgttaggtttccaagtttcacatttttttcaacgtttcg |
41627053 |
T |
|
| Q |
313 |
agcaaggccaattacgggagggtataacctaagaacctcatacaaaatcatggtgacctatcacaaaaa |
381 |
Q |
| |
|
| ||| |||||| |||||| ||||| || | ||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
41627054 |
cgaaagctcaattatgggaggatataatctcataacctcatacaaaatcatggtaacctatgacaaaaa |
41627122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 543 - 954
Target Start/End: Original strand, 41627756 - 41628167
Alignment:
| Q |
543 |
atacttacgatctttaggttatttagcccatcaaaatctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggt |
642 |
Q |
| |
|
|||||||| ||||| | |||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||| || | || |||||| ||||||| |
|
|
| T |
41627756 |
atacttacaatcttcaagttatttagcccatcaaaattaggttttttgttgccaaagatttgtaatacttcctcccttgcccttgcttgccactcagggt |
41627855 |
T |
|
| Q |
643 |
acctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagact |
742 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||| ||||||||||| ||| |||||||||| ||||||||||||||||| | |||||| |||| | | |
|
|
| T |
41627856 |
acctactcaataataccattgtccaaacaagtaaagttgaagtagtctcttgccctgcaaagtagaacaacttgcattcctgaattacatcttcaatatt |
41627955 |
T |
|
| Q |
743 |
cattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgccttt |
842 |
Q |
| |
|
||||||||||| | ||||||| ||| ||| | |||||||||| | |||| ||| | |||||| | ||||| |||||| || | ||||| ||||| |
|
|
| T |
41627956 |
cattcccacattcacgttgtttccatgttctttaatttccttgtggtttgtctctataagaatacctaataaatcattcttattttctccaccttccttt |
41628055 |
T |
|
| Q |
843 |
aatgctttctccctcttgttaatcatatctttaagcgaagaggttatttctttgtcgattttattcatccttctatggacaattgtaggtaaaaacctac |
942 |
Q |
| |
|
||| |||| |||| ||||| |||||||| ||||| ||||| |||| ||||| | |||| ||| ||||| |||| ||| || ||||||| |||||| | |
|
|
| T |
41628056 |
aatattttcacccttttgttgatcatatccttaagtgaagattttatatctttcccaatttcattaatcctcctattgaccatagtaggtacaaacctgc |
41628155 |
T |
|
| Q |
943 |
aaacaaaaatgt |
954 |
Q |
| |
|
||| ||| |||| |
|
|
| T |
41628156 |
aaataaacatgt |
41628167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 47; Significance: 3e-17; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 15865532 - 15865722
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
|||||||| |||||||||| |||| | ||||| ||||| || |||||||| | || | |||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
15865532 |
gaaagttcgaatgagaaattctgcagcagcaatgaaattgctatctttgcttctagtaaggcaaagttttgtccaagacaaattctaggaccccatccaa |
15865631 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatag |
216 |
Q |
| |
|
| || ||| | |||||| |||| ||||| || || | ||||||| ||| ||| |||||||| |||||| || ||||||||||||||||| |
|
|
| T |
15865632 |
aagggaaataagaaacttttccttttgtagcctttgcaattccttcagcaaacctttcaggtttgaactcctttgcatcatcaccccatag |
15865722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 15858526 - 15858654
Alignment:
| Q |
88 |
aaagttttgtccaatgcaaattcgaggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcagga |
187 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||| || ||| | |||||| ||| |||||||| || | ||||||| ||| ||| |||||||| |
|
|
| T |
15858526 |
aaagttttgtccaagacaaattctaggaccccatccaaaagggaaataagaaacttgtccttttgttgccttcgcaattccttcagcaaacctttcaggt |
15858625 |
T |
|
| Q |
188 |
ttgaacattttagcatcatcaccccatag |
216 |
Q |
| |
|
|||||| || ||||||||||||||||| |
|
|
| T |
15858626 |
ttgaactcctttgcatcatcaccccatag |
15858654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 15844329 - 15844540
Alignment:
| Q |
26 |
gaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcgaggaccccatccaa |
125 |
Q |
| |
|
||||||||||||||||||| |||| | ||||| ||||| || |||||||| | || | |||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
15844329 |
gaaagttcaaatgagaaattctgcagcaacaatgatattgctatctttgcttctaataaggtaaagttttgtccaagacaaattctaggaccccatccaa |
15844428 |
T |
|
| Q |
126 |
atggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcaccccatagttcgcagtc |
225 |
Q |
| |
|
| || ||| | |||||| ||| |||||||| || | ||||||| ||| ||| ||||| || |||||| || |||||||| |||||||| || || |
|
|
| T |
15844429 |
aggggaaataagaaacttgtccttttgttgccttcgcaattccttcagcaaacctttcgggtttgaactcctttgcatcatccccccatagatcttgatc |
15844528 |
T |
|
| Q |
226 |
atggtgaatcaa |
237 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15844529 |
atggtgaatcaa |
15844540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 15851626 - 15851754
Alignment:
| Q |
88 |
aaagttttgtccaatgcaaattcgaggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcagga |
187 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||| || | | | |||||| || ||||| || || | ||||||| ||||||| | ||||||| |
|
|
| T |
15851626 |
aaagttttgtccaagacaaattctaggaccccatccaaaagggatatacgaaacttggccttttgtggcctttgcaattccttcagaaaaccgttcagga |
15851725 |
T |
|
| Q |
188 |
ttgaacattttagcatcatcaccccatag |
216 |
Q |
| |
|
|||||| | || ||||||||||||||||| |
|
|
| T |
15851726 |
ttgaacttctttgcatcatcaccccatag |
15851754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 15844625 - 15844676
Alignment:
| Q |
322 |
aattacgggagggtataacctaagaacctcatacaaaatcatggtgacctat |
373 |
Q |
| |
|
|||||| |||||||||||||| || ||||| |||||||||||||| |||||| |
|
|
| T |
15844625 |
aattacaggagggtataaccttagtacctcgtacaaaatcatggtaacctat |
15844676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 609 - 726
Target Start/End: Original strand, 15852326 - 15852443
Alignment:
| Q |
609 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtgga |
708 |
Q |
| |
|
||||||| ||| |||||| |||||| ||||| ||||| | ||||| | |||||||||||| |||||| |||||| |||| ||| ||||| |||| | |
|
|
| T |
15852326 |
acttcctgccttgcacgttcttgccattcaggatacctgcctaataacaccattgtccaaaccagcaaacttgaagtggtctcttgccctgccaagtaaa |
15852425 |
T |
|
| Q |
709 |
acaacttgcattcctcga |
726 |
Q |
| |
|
|||| |||||||| |||| |
|
|
| T |
15852426 |
acaatttgcattcatcga |
15852443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 11019563 - 11019459
Alignment:
| Q |
88 |
aaagttttgtccaatgcaaattcgaggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccagaaaatctttcagga |
187 |
Q |
| |
|
||||||||||||||| |||| || |||||||||||||| || || | |||||| | ||||||||||| || |||| |||| |||| |||||||| || |
|
|
| T |
11019563 |
aaagttttgtccaatacaaagtcttggaccccatccaaaaggcaagtaagaaactttgccatttgttgcctttgaaactccttcagagaatctttctggt |
11019464 |
T |
|
| Q |
188 |
ttgaa |
192 |
Q |
| |
|
||||| |
|
|
| T |
11019463 |
ttgaa |
11019459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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