View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6131_high_38 (Length: 421)

Name: NF6131_high_38
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6131_high_38
NF6131_high_38
[»] chr7 (40 HSPs)
chr7 (1-331)||(48244478-48244808)
chr7 (3-297)||(48240648-48240946)
chr7 (332-397)||(48804636-48804701)
chr7 (332-404)||(1797413-1797485)
chr7 (332-404)||(43925465-43925537)
chr7 (332-404)||(10047960-10048032)
chr7 (336-404)||(43862056-43862124)
chr7 (336-402)||(9685696-9685762)
chr7 (332-396)||(4195294-4195358)
chr7 (336-396)||(4228843-4228903)
chr7 (336-404)||(17748466-17748534)
chr7 (332-404)||(21530701-21530773)
chr7 (336-404)||(22268113-22268181)
chr7 (336-404)||(22973924-22973992)
chr7 (336-404)||(36619338-36619406)
chr7 (336-400)||(43346867-43346931)
chr7 (332-396)||(45447923-45447987)
chr7 (332-404)||(47341829-47341901)
chr7 (332-397)||(18785622-18785687)
chr7 (332-397)||(19914793-19914858)
chr7 (332-397)||(22993458-22993523)
chr7 (332-397)||(34127711-34127776)
chr7 (332-404)||(11607084-11607156)
chr7 (332-404)||(13095811-13095883)
chr7 (336-404)||(27875172-27875239)
chr7 (336-400)||(34659183-34659247)
chr7 (345-396)||(8734778-8734829)
chr7 (332-398)||(16802076-16802142)
chr7 (342-400)||(20247258-20247315)
chr7 (332-386)||(39420791-39420845)
chr7 (336-397)||(42032053-42032114)
chr7 (336-396)||(14650274-14650334)
chr7 (335-402)||(365096-365163)
chr7 (346-396)||(27028246-27028296)
chr7 (336-402)||(46414632-46414698)
chr7 (330-403)||(3353376-3353449)
chr7 (356-397)||(21190871-21190912)
chr7 (332-397)||(42210353-42210418)
chr7 (336-396)||(24969416-24969476)
chr7 (336-404)||(26423371-26423439)
[»] chr2 (46 HSPs)
chr2 (3-156)||(38172161-38172313)
chr2 (332-397)||(7747224-7747289)
chr2 (332-402)||(2550818-2550888)
chr2 (330-404)||(19976891-19976965)
chr2 (332-402)||(20612622-20612692)
chr2 (340-402)||(21286402-21286464)
chr2 (332-397)||(18902621-18902686)
chr2 (332-404)||(331451-331523)
chr2 (332-404)||(8410081-8410153)
chr2 (332-400)||(10046564-10046632)
chr2 (336-396)||(34356160-34356220)
chr2 (332-404)||(42770735-42770807)
chr2 (336-403)||(25549682-25549749)
chr2 (330-404)||(41031990-41032063)
chr2 (351-404)||(15234145-15234198)
chr2 (336-397)||(38005356-38005417)
chr2 (345-402)||(41220598-41220655)
chr2 (332-396)||(3643979-3644043)
chr2 (332-404)||(10026700-10026772)
chr2 (336-404)||(14853451-14853519)
chr2 (332-404)||(22593085-22593157)
chr2 (345-397)||(25540495-25540547)
chr2 (336-400)||(37560127-37560191)
chr2 (332-404)||(44139434-44139506)
chr2 (330-396)||(9360840-9360906)
chr2 (332-398)||(44773215-44773280)
chr2 (332-373)||(44945544-44945585)
chr2 (336-396)||(6358243-6358303)
chr2 (336-384)||(32028367-32028415)
chr2 (336-404)||(39201592-39201660)
chr2 (332-396)||(44193429-44193493)
chr2 (330-404)||(2528425-2528499)
chr2 (347-397)||(11069843-11069893)
chr2 (332-402)||(16034887-16034957)
chr2 (336-402)||(23500768-23500833)
chr2 (336-402)||(38962717-38962783)
chr2 (345-402)||(13026497-13026554)
chr2 (336-373)||(21180429-21180466)
chr2 (336-373)||(24179525-24179562)
chr2 (364-404)||(3848998-3849038)
chr2 (336-396)||(12864178-12864238)
chr2 (336-404)||(14169693-14169761)
chr2 (332-396)||(15079433-15079497)
chr2 (332-404)||(31596516-31596588)
chr2 (332-396)||(41187659-41187723)
chr2 (346-386)||(41187813-41187853)
[»] chr3 (48 HSPs)
chr3 (332-403)||(6462362-6462433)
chr3 (332-404)||(25294910-25294982)
chr3 (332-404)||(47471782-47471854)
chr3 (330-404)||(29135861-29135935)
chr3 (332-397)||(11025464-11025528)
chr3 (332-397)||(42412866-42412931)
chr3 (336-401)||(46529958-46530023)
chr3 (336-397)||(54261180-54261241)
chr3 (332-404)||(10040507-10040579)
chr3 (336-404)||(51683039-51683107)
chr3 (332-397)||(26207893-26207958)
chr3 (336-397)||(35923715-35923776)
chr3 (336-397)||(48341974-48342035)
chr3 (332-404)||(7328794-7328866)
chr3 (336-404)||(11687194-11687262)
chr3 (336-396)||(29127873-29127933)
chr3 (332-404)||(29762240-29762312)
chr3 (336-396)||(45877408-45877468)
chr3 (336-400)||(49543473-49543537)
chr3 (345-404)||(7613011-7613070)
chr3 (330-396)||(6286073-6286139)
chr3 (347-404)||(928565-928622)
chr3 (336-396)||(13893880-13893940)
chr3 (336-396)||(15320140-15320200)
chr3 (336-404)||(30735030-30735098)
chr3 (332-396)||(30767340-30767404)
chr3 (336-403)||(49082778-49082845)
chr3 (356-403)||(53649701-53649748)
chr3 (336-397)||(32873641-32873701)
chr3 (336-397)||(33251616-33251677)
chr3 (356-397)||(47219118-47219159)
chr3 (332-397)||(13167535-13167604)
chr3 (336-396)||(31072832-31072892)
chr3 (336-404)||(33560814-33560882)
chr3 (336-404)||(35315910-35315978)
chr3 (332-404)||(40944833-40944905)
chr3 (330-397)||(10043098-10043165)
chr3 (345-400)||(24146417-24146472)
chr3 (349-404)||(38394259-38394313)
chr3 (334-373)||(39849024-39849063)
chr3 (330-397)||(47749196-47749263)
chr3 (336-397)||(7310795-7310856)
chr3 (332-397)||(30045771-30045836)
chr3 (332-373)||(37092621-37092662)
chr3 (336-397)||(49198305-49198366)
chr3 (336-396)||(10855338-10855398)
chr3 (356-404)||(15795578-15795626)
chr3 (356-404)||(51060366-51060414)
[»] scaffold0002 (4 HSPs)
scaffold0002 (332-404)||(523-595)
scaffold0002 (339-396)||(319382-319439)
scaffold0002 (332-404)||(412110-412182)
scaffold0002 (332-397)||(139384-139453)
[»] chr4 (41 HSPs)
chr4 (332-404)||(1446781-1446853)
chr4 (332-404)||(29895742-29895814)
chr4 (332-396)||(33647676-33647740)
chr4 (336-404)||(52950041-52950109)
chr4 (336-404)||(5472932-5473000)
chr4 (332-404)||(47078413-47078485)
chr4 (332-404)||(55920989-55921061)
chr4 (336-395)||(34667695-34667754)
chr4 (332-402)||(6032726-6032796)
chr4 (336-402)||(13552073-13552139)
chr4 (332-394)||(27248383-27248445)
chr4 (336-397)||(8888981-8889042)
chr4 (336-404)||(1940858-1940926)
chr4 (336-404)||(6779170-6779238)
chr4 (332-403)||(3574531-3574602)
chr4 (356-403)||(14567938-14567985)
chr4 (339-397)||(15840025-15840083)
chr4 (347-397)||(38168227-38168277)
chr4 (336-394)||(41339489-41339547)
chr4 (336-402)||(53599019-53599085)
chr4 (336-397)||(13073497-13073558)
chr4 (332-397)||(27531748-27531813)
chr4 (336-396)||(2559266-2559326)
chr4 (348-404)||(20128280-20128336)
chr4 (336-404)||(38075392-38075460)
chr4 (336-404)||(38165986-38166054)
chr4 (332-396)||(41162974-41163038)
chr4 (330-397)||(295623-295690)
chr4 (346-404)||(36145299-36145357)
chr4 (332-402)||(43458568-43458638)
chr4 (332-405)||(7741880-7741953)
chr4 (332-385)||(20421729-20421782)
chr4 (336-397)||(24166409-24166470)
chr4 (332-397)||(54524887-54524952)
chr4 (336-404)||(14123975-14124043)
chr4 (335-403)||(36262850-36262918)
chr4 (336-404)||(55005390-55005458)
chr4 (332-383)||(14567206-14567257)
chr4 (345-404)||(24850710-24850769)
chr4 (336-398)||(26480039-26480101)
chr4 (336-385)||(18531478-18531527)
[»] chr6 (32 HSPs)
chr6 (332-402)||(21898602-21898672)
chr6 (332-401)||(2271388-2271457)
chr6 (332-397)||(13468887-13468952)
chr6 (347-404)||(34954703-34954760)
chr6 (332-404)||(6606181-6606253)
chr6 (332-404)||(5253307-5253379)
chr6 (332-404)||(13036088-13036160)
chr6 (346-404)||(12635782-12635840)
chr6 (332-397)||(21016842-21016907)
chr6 (332-397)||(24671957-24672022)
chr6 (332-400)||(10311557-10311625)
chr6 (332-404)||(15643913-15643984)
chr6 (330-396)||(12606382-12606448)
chr6 (336-402)||(14107444-14107510)
chr6 (336-397)||(8612065-8612126)
chr6 (335-396)||(29444857-29444918)
chr6 (336-404)||(3030702-3030770)
chr6 (332-404)||(3601038-3601110)
chr6 (336-404)||(9147259-9147327)
chr6 (336-404)||(9179820-9179888)
chr6 (332-396)||(9366515-9366579)
chr6 (332-404)||(19089452-19089524)
chr6 (336-396)||(29333230-29333290)
chr6 (336-396)||(19230650-19230709)
chr6 (332-400)||(30788939-30789007)
chr6 (345-404)||(8932628-8932687)
chr6 (345-404)||(8944094-8944153)
chr6 (336-403)||(10312701-10312768)
chr6 (330-373)||(17115012-17115055)
chr6 (336-402)||(8938669-8938735)
chr6 (351-404)||(4596106-4596159)
chr6 (332-373)||(5759582-5759623)
[»] chr8 (27 HSPs)
chr8 (332-396)||(2467210-2467274)
chr8 (332-404)||(14666155-14666227)
chr8 (336-401)||(13085482-13085547)
chr8 (332-397)||(38922505-38922570)
chr8 (332-404)||(1013061-1013133)
chr8 (336-404)||(15884639-15884707)
chr8 (339-396)||(7673746-7673803)
chr8 (332-404)||(16893891-16893963)
chr8 (332-404)||(17981395-17981467)
chr8 (332-403)||(24837196-24837267)
chr8 (346-396)||(3418605-3418655)
chr8 (336-402)||(6100430-6100496)
chr8 (336-397)||(22810038-22810099)
chr8 (336-396)||(8141060-8141120)
chr8 (336-404)||(14846534-14846602)
chr8 (336-392)||(44893374-44893430)
chr8 (332-404)||(45521123-45521195)
chr8 (332-397)||(2964030-2964095)
chr8 (336-404)||(9860079-9860148)
chr8 (332-397)||(10927560-10927625)
chr8 (336-404)||(10535487-10535555)
chr8 (336-396)||(24938654-24938714)
chr8 (336-403)||(18373968-18374035)
chr8 (336-373)||(583772-583809)
chr8 (336-397)||(34846772-34846832)
chr8 (332-397)||(38235859-38235924)
chr8 (330-402)||(34613864-34613936)
[»] chr5 (36 HSPs)
chr5 (332-404)||(19572675-19572747)
chr5 (332-402)||(5732006-5732076)
chr5 (332-397)||(6767142-6767207)
chr5 (332-404)||(28856928-28857000)
chr5 (332-404)||(28857079-28857151)
chr5 (344-404)||(30995084-30995144)
chr5 (332-397)||(8513470-8513535)
chr5 (336-404)||(18136364-18136432)
chr5 (336-396)||(24498938-24498998)
chr5 (336-404)||(25417267-25417335)
chr5 (332-404)||(37263192-37263264)
chr5 (336-404)||(41163543-41163611)
chr5 (332-404)||(42086278-42086350)
chr5 (336-398)||(12766086-12766148)
chr5 (346-404)||(13664225-13664283)
chr5 (332-402)||(20525789-20525859)
chr5 (340-402)||(28862784-28862846)
chr5 (332-397)||(7866532-7866597)
chr5 (336-397)||(9812827-9812888)
chr5 (336-397)||(12704969-12705030)
chr5 (339-400)||(14152008-14152069)
chr5 (344-397)||(20223019-20223072)
chr5 (336-397)||(26077096-26077157)
chr5 (336-401)||(39728342-39728407)
chr5 (336-404)||(1898956-1899024)
chr5 (336-404)||(7308448-7308516)
chr5 (336-396)||(30349534-30349594)
chr5 (336-404)||(35403596-35403664)
chr5 (332-402)||(14588703-14588772)
chr5 (336-397)||(20692888-20692949)
chr5 (332-396)||(38897810-38897874)
chr5 (336-375)||(23383603-23383642)
chr5 (358-404)||(12081885-12081931)
chr5 (349-402)||(23247437-23247490)
chr5 (364-404)||(21149717-21149757)
chr5 (332-384)||(35561922-35561974)
[»] chr1 (52 HSPs)
chr1 (332-404)||(49078065-49078137)
chr1 (336-386)||(10173074-10173124)
chr1 (332-397)||(2981023-2981088)
chr1 (332-404)||(25165353-25165424)
chr1 (336-404)||(41663941-41664009)
chr1 (336-403)||(5503986-5504053)
chr1 (336-402)||(5855477-5855543)
chr1 (332-397)||(11397980-11398045)
chr1 (339-404)||(34334380-34334445)
chr1 (332-397)||(41743224-41743289)
chr1 (332-404)||(15238191-15238263)
chr1 (336-396)||(15465920-15465980)
chr1 (343-403)||(17358557-17358617)
chr1 (332-396)||(40288570-40288634)
chr1 (339-397)||(34719734-34719792)
chr1 (336-402)||(45361969-45362035)
chr1 (336-397)||(34877945-34878006)
chr1 (336-397)||(47312990-47313051)
chr1 (332-404)||(8763942-8764014)
chr1 (332-404)||(18649437-18649509)
chr1 (336-404)||(18915822-18915890)
chr1 (336-404)||(31576632-31576700)
chr1 (332-404)||(34697286-34697358)
chr1 (336-404)||(43959906-43959974)
chr1 (332-384)||(46929842-46929894)
chr1 (341-404)||(50503446-50503509)
chr1 (347-405)||(16956432-16956490)
chr1 (338-396)||(48798163-48798221)
chr1 (336-397)||(892389-892450)
chr1 (339-384)||(5063948-5063993)
chr1 (330-403)||(17988745-17988818)
chr1 (332-397)||(26325763-26325828)
chr1 (332-385)||(41696701-41696754)
chr1 (336-396)||(10422743-10422803)
chr1 (332-396)||(14357706-14357770)
chr1 (364-396)||(16263528-16263560)
chr1 (336-396)||(30927820-30927880)
chr1 (336-396)||(31152671-31152731)
chr1 (336-396)||(32151015-32151075)
chr1 (345-404)||(10336480-10336539)
chr1 (357-404)||(12744608-12744655)
chr1 (357-404)||(12755598-12755645)
chr1 (336-402)||(32826-32892)
chr1 (332-394)||(42744738-42744800)
chr1 (332-402)||(45726520-45726590)
chr1 (347-396)||(2567242-2567291)
chr1 (336-397)||(9853369-9853430)
chr1 (336-401)||(18808220-18808285)
chr1 (336-397)||(33418207-33418268)
chr1 (333-402)||(33498926-33498995)
chr1 (336-384)||(8905255-8905303)
chr1 (332-384)||(33004120-33004172)
[»] scaffold0316 (1 HSPs)
scaffold0316 (332-396)||(1706-1770)
[»] scaffold0006 (1 HSPs)
scaffold0006 (336-404)||(68474-68542)
[»] scaffold0005 (3 HSPs)
scaffold0005 (332-404)||(271158-271230)
scaffold0005 (356-403)||(249390-249437)
scaffold0005 (332-383)||(250118-250169)
[»] scaffold0004 (1 HSPs)
scaffold0004 (332-396)||(95071-95135)
[»] scaffold0376 (1 HSPs)
scaffold0376 (332-397)||(12623-12688)
[»] scaffold0332 (1 HSPs)
scaffold0332 (336-396)||(15288-15348)
[»] scaffold0384 (1 HSPs)
scaffold0384 (332-396)||(5926-5990)
[»] scaffold0009 (1 HSPs)
scaffold0009 (332-404)||(9389-9461)
[»] scaffold0016 (1 HSPs)
scaffold0016 (336-375)||(8823-8862)
[»] scaffold0209 (1 HSPs)
scaffold0209 (336-373)||(12532-12569)
[»] scaffold0079 (1 HSPs)
scaffold0079 (356-397)||(8152-8193)
[»] scaffold0086 (1 HSPs)
scaffold0086 (332-396)||(26136-26200)
[»] scaffold0072 (1 HSPs)
scaffold0072 (3-59)||(30864-30920)


Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 48244808 - 48244478
Alignment:
Q  1 ccgatgaagtagaattttcggatgatgagaaagaggctgagtacaagagactgcaaaaacataataaaagaggtcgtaacaatcaaaacaccaatcgaga 100  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48244808 ccgatgaagcagaatttttggatgatgagaaagaggctgagtacaagagactgcaaaaacataataaaagaggtcgtaacaatcaaaacaccgatcgaga 48244709  T
Q  101 ggatggaaaataacataaagcaaattcctcaaaaagatggttccatccctacaatgcatgttgcacttggtggctagtgttgcatagatcaacaatcgaa 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48244708 ggatggaaaataacataaagcaaattcctctaaaagatggttccatccctacaatgcctgttgcacttggtggctagtgttgcatagatcaacaatcgaa 48244609  T
Q  201 aatgtccctgcactccagctttggcactgtaaaatatctgttgtgggatcaatgtattggatattgtaaaattgtttggttaaaattgagtttgaaatga 300  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48244608 aatgtccctacactccagctttggcactgcaaaatatctgttgtgggatcaatgtattagatattgtaaaattgtttggttaaaattgagtttgaaatga 48244509  T
Q  301 aagaaattttgttccaatgtctttgtttcaa 331  Q
    |     |||||||||||||||||||||||||    
T  48244508 atttttttttgttccaatgtctttgtttcaa 48244478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 3 - 297
Target Start/End: Complemental strand, 48240946 - 48240648
Alignment:
Q  3 gatgaagtagaattttcggatgatgagaaagaggctgagtacaagagactgcaaaaacataataaaagaggtcgtaacaatcaaaacaccaatcgagagg 102  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||| ||| |||||    
T  48240946 gatgaagcagaattttcggatgatgagaaagaggctgagtaccagagactgcgaaaacagaataaaagaggtcgtaacaatcaaaataccgatcaagagg 48240847  T
Q  103 atggaaaataacataaagcaaattcctcaaaaagatggttccatccctacaa----tgcatgttgcacttggtggctagtgttgcatagatcaacaatcg 198  Q
    |||||||| |||| ||||||| |||||| |||||||||||||||||||||||    ||  ||||||||||||||| |||||||| |||||||||||||||    
T  48240846 atggaaaacaacagaaagcaagttcctctaaaagatggttccatccctacaatgtctgtttgttgcacttggtggatagtgttg-atagatcaacaatcg 48240748  T
Q  199 -aaaatgtccctgcactccagctttggcactgtaaaatatctgttgtgggatcaatgtattggatattgtaaaattgtttggttaaaattgagtttgaaa 297  Q
     |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48240747 aaaaatgtccctgcactccagctttggcagtgtaaaatatctgttgtaggttcaatgtattggatattgtaaaattgtttgcttaaaattgagtttgaaa 48240648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 48804636 - 48804701
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  48804636 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 48804701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 1797413 - 1797485
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||||| | |||||||| |||||||||| ||||||    
T  1797413 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccagggg 1797485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 43925465 - 43925537
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||||    
T  43925465 ttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggg 43925537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 10048032 - 10047960
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  10048032 ttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggg 10047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 43862124 - 43862056
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||    
T  43862124 ttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggg 43862056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 9685696 - 9685762
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| |||||||||| |||||||||||| ||||||| |||||||| | |||||||||||||||    
T  9685696 ttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcagg 9685762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 4195358 - 4195294
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||  ||||||||    
T  4195358 ttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatt 4195294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 4228903 - 4228843
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| || ||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  4228903 ttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatt 4228843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 17748534 - 17748466
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||  ||| |||||||||||||||  |||||||||| |||||||||| ||||||    
T  17748534 ttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggg 17748466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 21530701 - 21530773
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||| ||||| |||||||||| |||||||||||||||||| |||||||||||  |||| ||||| ||||||    
T  21530701 ttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggg 21530773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 22268181 - 22268113
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| |||| |||||||||||||  ||||||||||| |||||||||| ||||||    
T  22268181 ttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggg 22268113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 22973924 - 22973992
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||| |||| ||| ||||||||||||||||||   |||||||||| |||||||||||||||||    
T  22973924 ttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgattctcagggg 22973992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 36619406 - 36619338
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||| ||||||||||||||  |||||| ||||||||||| ||||||||||| |||||||||| ||||||    
T  36619406 ttggactctagtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggg 36619338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 43346931 - 43346867
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||| |||||||    
T  43346931 ttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctca 43346867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 45447923 - 45447987
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||| ||||||||||||| |||||||||||||||||| | | | ||||||||||||||||    
T  45447923 ttgcttgggttctagtggcaaggagctccttccaaggacgtacccgagaaataccaggttcgatt 45447987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 47341829 - 47341901
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||| ||||||||||||| | ||||||||||  ||||||||| ||||||    
T  47341829 ttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggg 47341901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 18785622 - 18785687
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||| ||||||| |||||||||  |||||||||||||||||| | |||||||||| ||||||||||    
T  18785622 ttgcatgggctccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattc 18785687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 19914858 - 19914793
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||  |||||||  ||||||||||    
T  19914858 ttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattc 19914793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 22993523 - 22993458
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| ||| |||||||||| |||||||||||||||||| | |||||||| | ||||||||||    
T  22993523 ttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattc 22993458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 34127776 - 34127711
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| | ||||||||  ||||||||||||||||| | |||||||||| ||||||||||    
T  34127776 ttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggttcgattc 34127711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 11607084 - 11607156
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| ||||||||||  ||||||||||||||||||  |||||||| | | |||||||||| ||||    
T  11607084 ttgcttgggctccagtggcaaggaactccttccaaggacgtattcggggaatatcggattcgattctctgggg 11607156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 13095811 - 13095883
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||  ||||||||| ||||||| |||||||||| | |||||||||| ||||| |||| ||||||    
T  13095811 ttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggg 13095883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 27875239 - 27875172
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||  |||||||||||| |||||||||||||||||| | |||||||| ||||||    
T  27875239 ttgggctccagtggcaagtagctccttccaag-acgtatctggggaataccggattcgattcccagggg 27875172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 34659183 - 34659247
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    |||||||| |||||||||| |||||||||| ||| ||| | |||||||||| |||||||||||||    
T  34659183 ttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctca 34659247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 8734829 - 8734778
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||| ||||||||||||||| ||||| ||||||| |||||||||||    
T  8734829 agtggcaaggagctccttccaaggacatatctcgggaatatcaggttcgatt 8734778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 398
Target Start/End: Original strand, 16802076 - 16802142
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattct 398  Q
    |||| ||||||| |||||||| | |||||||||||||||||| | |||||||||| | |||||||||    
T  16802076 ttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattct 16802142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 20247315 - 20247258
Alignment:
Q  342 tctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    ||||||||||||  |||||||||||||| ||| || |||||||||||||||||||||||    
T  20247315 tctagtggcaagaagctccttccaaggatgta-cttgggaataccaggttcgattctca 20247258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 39420791 - 39420845
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaatacc 386  Q
    ||||||||||||||||||||||| ||||||| |||||| ||| | ||||||||||    
T  39420791 ttgcttgggctctagtggcaaggagctcctttcaaggaggtacccggggaatacc 39420845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 42032053 - 42032114
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| ||| |||||  |||||||||||||||||| | |||||||||| ||||||||||    
T  42032053 ttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattc 42032114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 14650274 - 14650334
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||| |||||||||||||| |||||||||||||||||| | || ||||| | |||||||||    
T  14650274 ttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatt 14650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 365096 - 365163
Alignment:
Q  335 cttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    ||||||||||||||| || | |||||||||||  ||||||| | |||||||| |||||||||| ||||    
T  365096 cttgggctctagtggtaaagagctccttccaaaaacgtatccgaggaataccgggttcgattcacagg 365163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 396
Target Start/End: Original strand, 27028246 - 27028296
Alignment:
Q  346 gtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||| |||| ||||||| ||||| ||||| ||||||||||||||||    
T  27028246 gtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatt 27028296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 46414632 - 46414698
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    ||||||||  ||||||||| |||||||  ||||||||| | | ||||||||| ||||||||||||||    
T  46414632 ttgggctcccgtggcaaggagctccttttaaggacgtacccgtggaataccaagttcgattctcagg 46414698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 3353376 - 3353449
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||||| ||  |||||||||| |||| ||  |||||||||||| ||||||| | || |||||||||||||    
T  3353376 aattgcttggcctgcagtggcaaggagctcattataaggacgtatctagggaatatcgggatcgattctcaggg 3353449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 21190912 - 21190871
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||||| |||| |||||||||| ||||||||||    
T  21190912 gctccttccaaggacttatccggggaataccgggttcgattc 21190871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 42210418 - 42210353
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||| | ||| |||||||||| |||| ||||||||||||||| | |||||||| | ||||||||    
T  42210418 ttgcttagactccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattc 42210353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 24969476 - 24969416
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| |||  || |||||||||||||||  |||||| |||||||||    
T  24969476 ttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgatt 24969416  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 26423439 - 26423371
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||   ||||||||||||||||| |   |||||||| |||||||||| ||||||    
T  26423439 ttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccagggg 26423371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 38172313 - 38172161
Alignment:
Q  3 gatgaagtagaattttcggatgatgagaaagaggctgagtacaagagactgcaaaaacataataaaagaggtcgtaacaatcaaaacaccaatcgagagg 102  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||| |||||||||||||| ||||||||||  ||| | |  ||||    
T  38172313 gatgaagaagaattttcggatgacgagaaagaggccgagtacaagagactggtaaaacaaaataaaagaggtcgaaacaatcaaagtaccga-caggagg 38172215  T
Q  103 atggaaaataacataaagcaaattcctcaaaaagatggttccatccctacaatg 156  Q
    |||||||| ||||  |||||| |||||| |||||||||||||||| ||||||||    
T  38172214 atggaaaacaacaggaagcaagttcctctaaaagatggttccatcactacaatg 38172161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 7747224 - 7747289
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  7747224 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 7747289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 2550818 - 2550888
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| |||||||||| ||||||| |||||||||||| |||||||| | |||||||||| ||||    
T  2550818 ttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccagg 2550888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 19976965 - 19976891
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||| |||||||| |||||||||  |||| ||||||||||||||| |||||||||| ||||||||| |||||||    
T  19976965 aattgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattttcagggg 19976891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 20612692 - 20612622
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| |||||||||| |||||||||||||  ||||  |||||||||| |||||||||||||||    
T  20612692 ttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcagg 20612622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 402
Target Start/End: Original strand, 21286402 - 21286464
Alignment:
Q  340 gctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||    
T  21286402 gctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagg 21286464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 18902686 - 18902621
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| ||||||||||||||||||   |||||||||| ||||||||||    
T  18902686 ttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattc 18902621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 331451 - 331523
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||| | |||| ||||||||||||| | |||||||||| |||||||||| ||||||    
T  331451 ttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggg 331523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 8410081 - 8410153
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||| | || ||||| | |||||||||| ||||||    
T  8410081 ttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggg 8410153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 400
Target Start/End: Complemental strand, 10046632 - 10046564
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    |||||||||||| | |||||||| |||||||||||| ||||||| || ||||||| |||||||||||||    
T  10046632 ttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctca 10046564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 34356160 - 34356220
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| |||  |||||||||||||||||||||||||| |||||||||    
T  34356160 ttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatt 34356220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 42770807 - 42770735
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||| | |||||||||||||||||||| | | |||||| ||||| |||||||||||    
T  42770807 ttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggg 42770735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 25549682 - 25549749
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||| |||||||||| |||||||||||| |||||| ||||||||||  ||||||||||| ||||    
T  25549682 ttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttaggg 25549749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 41032063 - 41031990
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |  ||||| ||| |||||||||| ||||||    
T  41032063 aattgcttgggctccagtggcaaggagctccttccaaggacgta-ccagggaacaccgggttcgattcccagggg 41031990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 15234198 - 15234145
Alignment:
Q  351 aaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  15234198 aaggagctccttccaaggacgtacccggggaatactaggttcgattctcagggg 15234145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 38005356 - 38005417
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| |||||||||||||||||| | |||||||||  ||||||||||    
T  38005356 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattc 38005417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 41220598 - 41220655
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||    
T  41220598 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagg 41220655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 3644043 - 3643979
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| ||||| |||| |||| ||||||||||||||| |||||||||| |||| ||||    
T  3644043 ttgcttgggctccagtggaaaggagctcattccaaggacgtatccggggaataccgggtttgatt 3643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 10026772 - 10026700
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| | |||||||| ||||||||||||||||||   ||  |||||| |||||||||||||||||    
T  10026772 ttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggg 10026700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 14853519 - 14853451
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| ||||||||||  |||||| |||||| ||||| |||||||||||| ||||||| |||||||    
T  14853519 ttgggctccagtggcaaggaactcctttcaaggatgtatccggggaataccagattcgattttcagggg 14853451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 22593085 - 22593157
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||| |||| |||||||||| |||||||||||||||||| | |||||||||   ||||||||| ||||||    
T  22593085 ttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggg 22593157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 25540547 - 25540495
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||| |||| |||||||||||||||||||||||||  ||||||||||    
T  25540547 agtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattc 25540495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 37560127 - 37560191
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    |||||||| ||||| |||  |||||||||||||||||| | | ||||||||||||||||||||||    
T  37560127 ttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctca 37560191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 44139434 - 44139506
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||  |||  ||||||||||||| | |||||||||||||| |||||||||| ||||||    
T  44139434 ttgcttgggctccagtggtgaggaactccttccaaggatgcatctggggaataccgggttcgattcccagggg 44139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 9360906 - 9360840
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||||  || |||||||  ||| ||||||||||||| | ||||||||||||||||||||    
T  9360906 aattgcttgggcttcaggggcaaggatctcattccaaggacgtacccggggaataccaggttcgatt 9360840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 398
Target Start/End: Original strand, 44773215 - 44773280
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattct 398  Q
    |||||||| |||||||||||||| ||||||| |||||||||||  ||||||| | ||||||||||||    
T  44773215 ttgcttggactctagtggcaaggcgctcctttcaaggacgtattcggggaat-ctaggttcgattct 44773280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 44945544 - 44945585
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  44945544 ttgcttgggctcaagtggcaaggagctccttccaaggacgta 44945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 6358303 - 6358243
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||  |||| ||| ||||||||||| |||||||||||| |||||||    
T  6358303 ttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatt 6358243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 32028367 - 32028415
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaata 384  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||| ||||    
T  32028367 ttgggctctagtggcaaggagctgcttccaaggacgtatttgggaaata 32028415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 39201660 - 39201592
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||| ||||||||||| ||||||||||||||||||   | ||||||||   |||||||||||||||    
T  39201660 ttgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggg 39201592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 44193429 - 44193493
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| ||| |||||||| | |||| |||||| |||||||| | ||||||||||||||||||    
T  44193429 ttgcttggactccagtggcaatgagctctttccaatgacgtatccgaggaataccaggttcgatt 44193493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 2528499 - 2528425
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||| |||||||| |||||||| | ||||||||||||||||||   | |||| ||| |||||||||| ||||||    
T  2528499 aattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggg 2528425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 11069843 - 11069893
Alignment:
Q  347 tggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||| ||| |||| ||||||||||||| | |||||||||||||||||||||    
T  11069843 tggctaggagctcattccaaggacgtacccggggaataccaggttcgattc 11069893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 16034887 - 16034957
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| ||  ||||| ||||  ||||||||||||||||||| | |||||||| ||||||||| |||||    
T  16034887 ttgcttggacttcagtggtaaggaactccttccaaggacgtatccgaggaataccgggttcgattttcagg 16034957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 23500833 - 23500768
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    ||||||||  ||||||||| ||||||||||| |||||||| |||||||| | |||||||||| ||||    
T  23500833 ttgggctccggtggcaaggagctccttccaaagacgtatc-ggggaatatcgggttcgattcccagg 23500768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 38962717 - 38962783
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||| ||| ||||| |||| |||| || |||||||||||| |||||||||| ||||||||| |||||    
T  38962717 ttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcagg 38962783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 13026554 - 13026497
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    ||||||||||  |||||||||||||||||||  ||||||| | ||||||||| |||||    
T  13026554 agtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcagg 13026497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 21180466 - 21180429
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  21180466 ttgggctccagtggcaaggagctccttccaaggacgta 21180429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 24179525 - 24179562
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  24179525 ttgggctctagtggcaaagagctccttccaaggacgta 24179562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 3849038 - 3848998
Alignment:
Q  364 caaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||| ||||||| ||||||||| |||||||    
T  3849038 caaggacgtatctggagaataccgggttcgattatcagggg 3848998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 12864178 - 12864238
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||| ||||| ||||||||||| |||||||  |||||||||| | |||||||    
T  12864178 ttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatt 12864238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 14169761 - 14169693
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||| ||||| | || ||||||||||||||  |||||||| | |||||||||||| ||||    
T  14169761 ttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggg 14169693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 15079433 - 15079497
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||||||  |||||||||  | ||||||||||||||| | |||||||||  |||||||||    
T  15079433 ttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatacagggttcgatt 15079497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 31596588 - 31596516
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||  || |||||||||| ||||||||||| |||||||| |  ||||| ||||||| ||| |||||||    
T  31596588 ttgcttggattccagtggcaaggagctccttccaaagacgtatccgtagaatatcaggttctattttcagggg 31596516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 41187659 - 41187723
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||| || | ||| |||||| |||||||| |||||||||||||  ||||||| |||||||||    
T  41187659 ttgcttgcgcgcaagtagcaaggagctccttctaaggacgtatctgaagaataccgggttcgatt 41187723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 41187813 - 41187853
Alignment:
Q  346 gtggcaaggtgctccttccaaggacgtatctggggaatacc 386  Q
    ||||||||| |||||||||||||||||||| | ||||||||    
T  41187813 gtggcaaggagctccttccaaggacgtatccgaggaatacc 41187853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 6462362 - 6462433
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  6462362 ttgcttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacaggg 6462433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 25294910 - 25294982
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||| ||||||| ||||    
T  25294910 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctgggg 25294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 47471782 - 47471854
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||||| | |||||||||||||||||| || ||||||||| |||||||||| ||||||    
T  47471782 ttgcttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggttcgattcccagggg 47471854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 29135861 - 29135935
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||| |||||||||| | |||||||| ||||||    
T  29135861 aattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggg 29135935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 11025528 - 11025464
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| ||||| |||| || |||||||||||||||||||||||||||||||||||||||    
T  11025528 ttgcttgggctccagtggtaaggagc-ccttccaaggacgtatctggggaataccaggttcgattc 11025464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 42412931 - 42412866
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| | |||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  42412931 ttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 42412866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 46530023 - 46529958
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcag 401  Q
    |||||||| |||||||||| ||||||| |||||||||| |||||||||||| ||||||||||||||    
T  46530023 ttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcgattctcag 46529958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 54261180 - 54261241
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  54261180 ttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattc 54261241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 10040507 - 10040579
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||| ||||||||| | |||||||| | |||||||||||||||||    
T  10040507 ttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcagggg 10040579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 51683107 - 51683039
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||| ||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  51683107 ttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggg 51683039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 26207958 - 26207893
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||||||| ||| | |||||||||| ||||||||||    
T  26207958 ttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattc 26207893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 35923776 - 35923715
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||||||| | |||| ||||||||||||| |||| ||||||||||||||||||    
T  35923776 ttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgattc 35923715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 48341974 - 48342035
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| ||||    
T  48341974 ttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattc 48342035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 7328794 - 7328866
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||| ||||||||||||||| | |||||||||||||||| | ||| |||||| |||||||||| ||||||    
T  7328794 ttgcttgtgctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggg 7328866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 11687262 - 11687194
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||  |||||||||||||||||| |||| ||||||| |||| ||||||||||||    
T  11687262 ttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggg 11687194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 29127873 - 29127933
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||| | |||||||||    
T  29127873 ttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatt 29127933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 29762312 - 29762240
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||| ||||  |||||||| | ||| |||||||||||||    
T  29762312 ttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcagggg 29762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 45877408 - 45877468
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| || ||||||||||||||||| |||||||||| |||||||||    
T  45877408 ttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatt 45877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 49543473 - 49543537
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    ||||||| ||||||||||| ||||||||||||||||||||  ||||||| | |||||||||||||    
T  49543473 ttgggctttagtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgattctca 49543537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 7613070 - 7613011
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||| ||||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  7613070 agtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcccagggg 7613011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 6286073 - 6286139
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||| ||||||| ||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||    
T  6286073 aattgtttgggctttagtgacaaggagctccttccaaggaagtatcaggggaataccagattcgatt 6286139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 928565 - 928622
Alignment:
Q  347 tggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||| ||||||||||||| || ||||||||||| |||||||||||||||    
T  928565 tggcaaggagctcattccaaggacgtacctagggaataccagattcgattctcagggg 928622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 13893880 - 13893940
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| ||||||||||||||||| || |||||||||| |||| ||||    
T  13893880 ttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatt 13893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 15320140 - 15320200
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||| ||| |||||||||| |||||||||||||||||| | |||||||||| |||||||||    
T  15320140 ttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 15320200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 30735098 - 30735030
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||| |||| ||||||||||| |   ||||||||||  ||||||||||||||||    
T  30735098 ttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgattctcagggg 30735030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 30767404 - 30767340
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| |||||||||| | |||||||||||| ||| |||||||||| | |||||||||    
T  30767404 ttgcttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatt 30767340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 49082778 - 49082845
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||| ||||||| || |||||||| ||||||||||| ||||||||||  ||||||||| |||||    
T  49082778 ttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccaggg 49082845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 53649701 - 53649748
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||    
T  53649701 gctccttccaaggacgtattcggggaataccgggttcgattctcaggg 53649748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 32873701 - 32873641
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| |||| ||||||||||||| |  ||||||||||||||||||||    
T  32873701 ttgggctccagtggcaaggagctcattccaaggacgta-cccgggaataccaggttcgattc 32873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 33251616 - 33251677
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||  ||||||| | |||||||||||||||||||  |||||||||| ||||||||||    
T  33251616 ttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattc 33251677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 47219118 - 47219159
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  47219118 gctctttccaaggacgtatccggggaataccaggttcgattc 47219159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 13167604 - 13167535
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaagga----cgtatctggggaataccaggttcgattc 397  Q
    ||||||||| | ||||||||||| ||||||||||||||    ||||||||||||||| | ||||||||||    
T  13167604 ttgcttgggatttagtggcaaggagctccttccaaggacgtacgtatctggggaatatcgggttcgattc 13167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 31072832 - 31072892
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| | |||||||| ||||||| |||||||||| | || |||||||||||||||||    
T  31072832 ttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgatt 31072892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 33560814 - 33560882
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||  |||||||||| |||||||||||||| ||| |||||||||||| |||| ||| | ||||||    
T  33560814 ttgggcttcagtggcaaggagctccttccaaggatgtacctggggaataccgggtttgatccccagggg 33560882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 35315910 - 35315978
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||| | |||||||||||||||||| | || ||||| | |||||||||| ||||||    
T  35315910 ttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggg 35315978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 40944833 - 40944905
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||  ||||||||  ||||||||||||||||||||  | |||||||  ||||||||| ||||||    
T  40944833 ttgcttgggctccggtggcaagaagctccttccaaggacgtatccagagaataccgagttcgattcccagggg 40944905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 10043098 - 10043165
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||| |||||||| | |||||| | ||||||| |||||||||||| |||||||| | ||||||||||    
T  10043098 aattgtttgggctccactggcaatgagctcctttcaaggacgtatccggggaatatcgggttcgattc 10043165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 24146472 - 24146417
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    |||| ||||| ||||||||||||||| ||||||||||||| | |||| ||||||||    
T  24146472 agtgacaaggagctccttccaaggacatatctggggaatatcgggtttgattctca 24146417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 38394313 - 38394259
Alignment:
Q  349 gcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||| ||| ||||||||||||||||||  ||||||| |||||||||||||||||    
T  38394313 gcaaggagcttcttccaaggacgtatctgaagaatacc-ggttcgattctcagggg 38394259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 39849024 - 39849063
Alignment:
Q  334 gcttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  39849024 gcttgggctccagtggcaaggagctccttccaaggacgta 39849063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 47749263 - 47749196
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||| |||||||| ||||| || | ||| ||||||||||||||||  ||||||||| ||||||||||    
T  47749263 aattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattc 47749196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 7310856 - 7310795
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||  ||||||| | |||||||||||| ||||| ||| |||||||| ||||||||||    
T  7310856 ttgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgattc 7310795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 30045771 - 30045836
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||| | |||||||  ||| |||||  ||||||||||| ||||||||||    
T  30045771 ttgcttgggctcaagtggcaatgagctccttttaagaacgtacatggggaataccgggttcgattc 30045836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 373
Target Start/End: Complemental strand, 37092662 - 37092621
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    |||||||||||| |||||||||| ||| ||||||||||||||    
T  37092662 ttgcttgggctccagtggcaaggagcttcttccaaggacgta 37092621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 49198305 - 49198366
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||| ||||| | | ||||||||||| |||| |||||||||| ||||||||||    
T  49198305 ttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattc 49198366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 10855338 - 10855398
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| |||||||||||||| |||  |||| |||||| |||| ||||    
T  10855338 ttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatt 10855398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 15795626 - 15795578
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||||||||| | ||||||||||  ||||||||| ||||||    
T  15795626 gctccttccaaggacgtacccggggaataccgagttcgattcccagggg 15795578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 51060414 - 51060366
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||  |||| |||||||| | |||||||||||||||||    
T  51060414 gctccttccaaggatctatccggggaatatcgggttcgattctcagggg 51060366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 523 - 595
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||||    
T  523 ttgcttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggg 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 319382 - 319439
Alignment:
Q  339 ggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||| |||| ||||    
T  319382 ggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatt 319439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 412182 - 412110
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||  |||||| | | |||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  412182 ttgcttgggcttcagtggcgatgagctccttccaaggacgtatccggggaataccgagttcgattcacagggg 412110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 139384 - 139453
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaagg----acgtatctggggaataccaggttcgattc 397  Q
    ||||||||| | ||||||||||| |||||||||||||    |||||||||||||||| | ||||||||||    
T  139384 ttgcttgggatttagtggcaaggagctccttccaaggacgtacgtatctggggaatatcgggttcgattc 139453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 1446781 - 1446853
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  1446781 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggg 1446853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 29895742 - 29895814
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  29895742 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggg 29895814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 33647676 - 33647740
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  33647676 ttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatt 33647740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 52950041 - 52950109
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||||||| ||||||    
T  52950041 ttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggg 52950109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 5473000 - 5472932
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| |||| || |||||||||||| ||||||||||||||| ||||||||||||    
T  5473000 ttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcagggg 5472932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 47078413 - 47078485
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||| || |||||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||||    
T  47078413 ttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggg 47078485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 55920989 - 55921061
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||| | | |||||||||| |||||||||| ||||||    
T  55920989 ttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggg 55921061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 395
Target Start/End: Complemental strand, 34667754 - 34667695
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgat 395  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||    
T  34667754 ttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgat 34667695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 6032796 - 6032726
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| |||||||||| |||||||||||||||||| | |||||||||| ||||| ||| |||||    
T  6032796 ttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaattttcagg 6032726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 13552073 - 13552139
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| |||||||||| |||||||||||| ||||||| |||||||| | |||||||||||||||    
T  13552073 ttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcagg 13552139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 27248383 - 27248445
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcga 394  Q
    |||||||||||| |||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  27248383 ttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcga 27248445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 8888981 - 8889042
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||| ||||||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  8888981 ttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattc 8889042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 1940926 - 1940858
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||| |||||||||||||||||| | ||| |||| | |||||||||| ||||||    
T  1940926 ttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggg 1940858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 6779170 - 6779238
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||| |||||||||| ||||||    
T  6779170 ttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggg 6779238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 403
Target Start/End: Complemental strand, 3574602 - 3574531
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||||||| |||||||||| |||||||||||||||||| || |||||||||  |||| |||| |||||    
T  3574602 ttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccaggg 3574531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 14567938 - 14567985
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  14567938 gctccttctaaggacgtatttggggaataccaggttcgattctcaggg 14567985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 15840083 - 15840025
Alignment:
Q  339 ggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||| |||||||||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  15840083 ggctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattc 15840025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 38168227 - 38168277
Alignment:
Q  347 tggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattc 38168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 41339547 - 41339489
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcga 394  Q
    ||||||||||||||||||| |||||||||||||||||| | || ||||||| |||||||    
T  41339547 ttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcga 41339489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 53599019 - 53599085
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| | |||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||    
T  53599019 ttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagg 53599085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 13073497 - 13073558
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||||||| | |||||||||||||||||| |||| |||||||  |||||||||    
T  13073497 ttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattc 13073558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 27531813 - 27531748
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| ||| |||||||||| |||||||||||||||||| |  ||||||||| ||||||||||    
T  27531813 ttgcttggactccagtggcaaggagctccttccaaggacgtacccagggaataccgggttcgattc 27531748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 2559266 - 2559326
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||| | |||||||||||||||||| |||||||||||| | |||||||    
T  2559266 ttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatt 2559326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 20128280 - 20128336
Alignment:
Q  348 ggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||| | |||||||||||||||||| |||||||||  |||||||||||||||||    
T  20128280 ggcaaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggg 20128336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 38075392 - 38075460
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| || ||||||| | |||||||||||||||||  || ||||||| |||||||||||||||||    
T  38075392 ttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcagggg 38075460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 38165986 - 38166054
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| | |||||||| |||||||||||||||||||| |||||||||  |||| ||||| ||||||    
T  38165986 ttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggg 38166054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 41163038 - 41162974
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| |||| ||||| |||||||||||||||||||| ||| ||||||  ||||||||    
T  41163038 ttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatt 41162974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 295690 - 295623
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||| |||||||| ||||||||||  | ||||| ||||||||||| |||||||||||| ||||||||    
T  295690 aattgtttgggctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattc 295623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 404
Target Start/End: Complemental strand, 36145357 - 36145299
Alignment:
Q  346 gtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||| |||| ||||||||||||| | |||||||||| |||||||||| ||||||    
T  36145357 gtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcccagggg 36145299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 43458568 - 43458638
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| |||||||||  |||| |||||||||||||| ||||||||||  | |||||||| ||||    
T  43458568 ttgcttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccagg 43458638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 7741880 - 7741953
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggggt 405  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||  | |||||| | ||||| | ||||||||||    
T  7741880 ttgcttgggctctagtggcaaggagctcctttcaagtacgtattcgaggaatatcgggttccaatctcaggggt 7741953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 385
Target Start/End: Original strand, 20421729 - 20421782
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaatac 385  Q
    |||||||||||  |||||||||| ||||||| ||| ||||||||||||||||||    
T  20421729 ttgcttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaatac 20421782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 24166409 - 24166470
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| ||||||||||||||||||   |||||||||  ||||||||||    
T  24166409 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattc 24166470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 54524887 - 54524952
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||| |||||||||||||| | ||||||||||| ||||||| | | ||||||||| ||||||||    
T  54524887 ttgcttaggctctagtggcaaagagctccttccaatgacgtatttagagaataccagattcgattc 54524952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 14123975 - 14124043
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| | |||||||  |||||||||||| |||||  || ||||||||||||||||||| ||||||    
T  14123975 ttgggctccaatggcaagaagctccttccaagaacgtacttgaggaataccaggttcgattcccagggg 14124043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 36262918 - 36262850
Alignment:
Q  335 cttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||| |||| |||||||||  |||||||||||||||||| | || ||||||| |||||||||| |||||    
T  36262918 cttgagctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccaggg 36262850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 55005458 - 55005390
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||| ||||||| | ||||||||||| |||||||||||| ||||||   |||||||| ||||||    
T  55005458 ttgggctctggtggcaatgagctccttccaaagacgtatctgggaaataccgaattcgattcgcagggg 55005390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 383
Target Start/End: Original strand, 14567206 - 14567257
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaat 383  Q
    |||||||||||| |||||||||| |||| ||||||||||||| | |||||||    
T  14567206 ttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 14567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 24850769 - 24850710
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||| |||| ||||||||||||||| ||| |||||||| ||| ||| |||||||    
T  24850769 agtggcaaggagctcattccaaggacgtatccgggaaataccagattcaattatcagggg 24850710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 26480101 - 26480039
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattct 398  Q
    |||||||| | |||||||| |||||||||||| |||||  |||||||||||  ||||||||||    
T  26480101 ttgggctccactggcaaggagctccttccaagtacgtacatggggaataccgagttcgattct 26480039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 18531478 - 18531527
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaatac 385  Q
    |||||||||||||||||   |||| ||||||| |||||||||||||||||    
T  18531478 ttgggctctagtggcaaaaagctcattccaagaacgtatctggggaatac 18531527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 21898602 - 21898672
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||    
T  21898602 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagg 21898672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 2271457 - 2271388
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcag 401  Q
    |||||||||||| |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||    
T  2271457 ttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctcag 2271388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 13468887 - 13468952
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  13468887 ttgcttgggctctggtggcaaggagctccttccaaggacgtatccggggaataccaggttcaattc 13468952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 34954760 - 34954703
Alignment:
Q  347 tggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34954760 tggcaaggagctccttccaaggacgtacctggggaataccaggttcgattctcagggg 34954703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 6606253 - 6606181
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||   |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  6606253 ttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggg 6606181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 5253379 - 5253307
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| | |||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||||    
T  5253379 ttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggg 5253307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 13036160 - 13036088
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||||  |||||||| | ||||||||| |||||||    
T  13036160 ttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggg 13036088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 12635782 - 12635840
Alignment:
Q  346 gtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  12635782 gtggcaagatgctccttccaaggacgtatccggggaataccaggtttgattcccagggg 12635840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 21016907 - 21016842
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||| ||||||| | |||||||||| ||||||||||    
T  21016907 ttgcttgggctccagtggcaaggagctccttccagggacgtacccggggaataccgggttcgattc 21016842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 24672022 - 24671957
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||| ||||| ||||    
T  24672022 ttgcttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattc 24671957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 400
Target Start/End: Complemental strand, 10311625 - 10311557
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    |||||||||||| ||| |||||| |||||||||||| ||||||| |||||||||| |||||||| ||||    
T  10311625 ttgcttgggctccagtagcaaggagctccttccaagaacgtatccggggaataccgggttcgatcctca 10311557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 15643984 - 15643913
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||| |||||||||||||||| ||||||| | |||||||||| ||||||    
T  15643984 ttgcttgggctccagtggcaaggagctcattccaaggacgtatct-gggaataacgggttcgattcacagggg 15643913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 12606382 - 12606448
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||||||  |||||| | |||||||||||| ||||||| |||||||||||| |||||||    
T  12606382 aattgcttgggctctgctggcaatgagctccttccaagaacgtatccggggaataccagattcgatt 12606448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 14107510 - 14107444
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| |||||||||| ||||||||||| |||||||  |||||||||| |||||||||| ||||    
T  14107510 ttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccagg 14107444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 8612126 - 8612065
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||| ||| |||||||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  8612126 ttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 8612065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 396
Target Start/End: Complemental strand, 29444918 - 29444857
Alignment:
Q  335 cttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||||||||||| ||||||||||| |||||| | |||| ||||| |||||||||    
T  29444918 cttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatt 29444857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 3030770 - 3030702
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| |||| |||||||||||||| | ||||||| | |||||||||| ||||||    
T  3030770 ttgggctccagtggcaaggagctcattccaaggacgtatttcgggaatatcgggttcgattcccagggg 3030702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 3601038 - 3601110
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||||| | |||| ||||||  ||||||  |||||||||| | |||||||||||||||    
T  3601038 ttgcttgggctctagtggcaaagagctctttccaaatacgtattcggggaataccggtttcgattctcagggg 3601110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 9147259 - 9147327
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| ||||| |||| |||| ||||||||||||| |||||||||| | |||||||||| ||||||    
T  9147259 ttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggg 9147327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 9179888 - 9179820
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| |||| ||||||||||||| |  ||||||||| |||||||||| ||||||    
T  9179888 ttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggg 9179820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 9366579 - 9366515
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| |||| ||||| |||||||||||||| |||  ||||||||| |||||||||||    
T  9366579 ttgcttgggctccagtgacaaggagctccttccaaggatgtacttggggaatatcaggttcgatt 9366515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 19089452 - 19089524
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| ||| |||||| |||| || |||||||||||| | ||||||||||||| ||||| ||||||    
T  19089452 ttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggg 19089524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 29333290 - 29333230
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||||||||||| | |||||||||||||||||| |  ||||||||| |||||||||    
T  29333290 ttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatt 29333230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 19230709 - 19230650
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| |||||||||||||||||| || ||||||||| | |||||||    
T  19230709 ttgggctccagtggcaaggagctccttccaaggacgta-ctcgggaataccggattcgatt 19230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 400
Target Start/End: Complemental strand, 30789007 - 30788939
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    |||||||| | | |||||||||| |||||||||||||| ||||| |||||||| | |||| ||||||||    
T  30789007 ttgcttggaccccagtggcaaggagctccttccaaggatgtatccggggaatatcgggtttgattctca 30788939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 8932628 - 8932687
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||| | |||||||||||| ||||| |||||||| | |||||||||| ||||||    
T  8932628 agtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggg 8932687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 8944094 - 8944153
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||| | |||||||||||| ||||| |||||||| | |||||||||| ||||||    
T  8944094 agtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggg 8944153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 10312701 - 10312768
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||||||||| || | |||||||||||||||  | ||||| |||||| |||||||||| |||||    
T  10312701 ttgggctctagtggtaaagagctccttccaaggacaaacctgggaaataccgggttcgattcccaggg 10312768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 373
Target Start/End: Complemental strand, 17115055 - 17115012
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    |||||||||||||| |||||||||  ||||||||||||||||||    
T  17115055 aattgcttgggctccagtggcaagaagctccttccaaggacgta 17115012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 8938669 - 8938735
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| |||| ||||| ||||||||||| ||| |||| |||||||||  |||||||||| ||||    
T  8938669 ttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccagg 8938735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 4596106 - 4596159
Alignment:
Q  351 aaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||| ||||||| |||||||||||  |||||||| ||||||||||| |||||||    
T  4596106 aaggagctcctttcaaggacgtattcggggaatatcaggttcgattttcagggg 4596159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 5759582 - 5759623
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    |||||||||||| ||||||||||  |||||||||||||||||    
T  5759582 ttgcttgggctccagtggcaaggaactccttccaaggacgta 5759623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 2467274 - 2467210
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  2467274 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 2467210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 14666227 - 14666155
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||| ||||||||||||||| |||||||||| |||||||||| ||||||    
T  14666227 ttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggg 14666155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 13085482 - 13085547
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcag 401  Q
    |||||||| |||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||    
T  13085482 ttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcag 13085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 38922570 - 38922505
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  38922570 ttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 38922505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 1013133 - 1013061
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||  ||||||||||||||| |||||||||| |||||||||| ||||||    
T  1013133 ttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggg 1013061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 15884707 - 15884639
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| ||||| |||| |||||||||||||||||| |||||||||||| |||||||||| ||||||    
T  15884707 ttgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccagggg 15884639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 7673803 - 7673746
Alignment:
Q  339 ggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  7673803 ggctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgatt 7673746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 16893891 - 16893963
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||| |||||||||||  |||||||||| |||||||| |||||||| | |||||||||| ||||||    
T  16893891 ttgcttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggg 16893963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 17981395 - 17981467
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||| ||| | ||| |||||| |||||||||| ||||||    
T  17981395 ttgcttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggg 17981467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 24837196 - 24837267
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||||||| |||||||||| |||||||||||| ||||| | ||||||||||  ||||||||| |||||    
T  24837196 ttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccaggg 24837267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 396
Target Start/End: Complemental strand, 3418655 - 3418605
Alignment:
Q  346 gtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  3418655 gtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgatt 3418605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 6100430 - 6100496
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||  |||||||||| ||||||| |||||||||||| |||||||||| |||||||||| ||||    
T  6100430 ttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccagg 6100496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 22810038 - 22810099
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||||||||| |||||||||||||||||||| || ||| | | ||||||||||    
T  22810038 ttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgattc 22810099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 8141060 - 8141120
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| ||| |||||||||||||||  |||||||||| |||||||||    
T  8141060 ttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatt 8141120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 14846534 - 14846602
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| | |||||||  |||||||| ||||||||| | |||||||||| |||||||||||||||||    
T  14846534 ttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattctcagggg 14846602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 44893430 - 44893374
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttc 392  Q
    |||||||| |||||||||| |||||||||||||||||| | |||||||||| |||||    
T  44893430 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttc 44893374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 45521123 - 45521195
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| | || ||||||||| ||| | |||||||||| |||||||||| ||||||    
T  45521123 ttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccagggg 45521195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 2964030 - 2964095
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||||||  |||||||||||| ||||| | ||||||||||  |||||||||    
T  2964030 ttgcttggactctagtggcaagtagctccttccaagaacgtacccggggaataccgtgttcgattc 2964095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 9860148 - 9860079
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtat-ctggggaataccaggttcgattctcagggg 404  Q
    ||||| || |||||||| | ||||||||||||||||||| | |||||||||| |||||||||| ||||||    
T  9860148 ttgggatccagtggcaaagagctccttccaaggacgtatccgggggaataccgggttcgattcccagggg 9860079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 10927560 - 10927625
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||  |||||||||| ||| ||| |||||||||| | |||||||||| ||||||||||    
T  10927560 ttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattc 10927625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 10535555 - 10535487
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||| ||| |||||||||| |||||||||||||||||||| | |||||||  ||||| ||| |||||||    
T  10535555 ttggactccagtggcaaggagctccttccaaggacgtatccgaggaatacatggttcaattttcagggg 10535487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 24938714 - 24938654
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| ||||| ||||||||| || | || |||||||||||||||||    
T  24938714 ttgggctccagtggcaaggagctccctccaaggacatacccggagaataccaggttcgatt 24938654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 18373968 - 18374035
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||| | |||||||| |||| |||||| ||  |||| ||| |||||||||||||||||||||||    
T  18373968 ttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcaggg 18374035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 583772 - 583809
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  583772 ttgggctctagtggcaaggagctacttccaaggacgta 583809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 34846772 - 34846832
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| |||| ||||||||||||| |  ||||||||| ||||||||||    
T  34846772 ttgggctccagtggcaaggagctcattccaaggacgta-cccgggaataccgggttcgattc 34846832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 38235859 - 38235924
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| ||||||||||  || |||||||||||||| ||||| | |||| | ||||||||    
T  38235859 ttgcttgggctccagtggcaaggaacttcttccaaggacgtacctgggaagtaccggattcgattc 38235924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 34613936 - 34613864
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    ||||| |||||||| |||||||| | |||||||||||   |||||| |||||||| | |||||||||| ||||    
T  34613936 aattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcccagg 34613864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 19572675 - 19572747
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||| ||||| ||||||    
T  19572675 ttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggg 19572747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 5732076 - 5732006
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| |||||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||    
T  5732076 ttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagg 5732006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 6767207 - 6767142
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  6767207 ttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 6767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 28856928 - 28857000
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||| | | |||||||||| |||||||||| ||||||    
T  28856928 ttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggg 28857000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 28857079 - 28857151
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||||||||||| | | |||||||||| |||||||||| ||||||    
T  28857079 ttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggg 28857151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 30995084 - 30995144
Alignment:
Q  344 tagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  30995084 tagtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggg 30995144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 8513470 - 8513535
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| ||| |||||||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  8513470 ttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 8513535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 18136432 - 18136364
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| ||||||||||| |||||||| || ||||||| |||||||||| ||||||    
T  18136432 ttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggg 18136364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 24498938 - 24498998
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| |||||| ||||||||||||||||||||||| ||||| | |||||||||    
T  24498938 ttgggctctagtagcaaggagctccttccaaggacgtatctggagaatatcgggttcgatt 24498998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 25417335 - 25417267
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| ||||||||||||||||||   |||||||||| |||||||||| ||||||    
T  25417335 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggg 25417267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 37263192 - 37263264
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| | |||||| ||||||||| | |||||||| | |||||||||||||||||    
T  37263192 ttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcagggg 37263264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 41163611 - 41163543
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| |||||||||||| ||||| | |||||||||| |||||||||| ||||||    
T  41163611 ttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccagggg 41163543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 42086278 - 42086350
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||  ||||||||| |||||||||||||||||| | | |||||||| |||||||||| ||||||    
T  42086278 ttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggg 42086350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 12766086 - 12766148
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattct 398  Q
    |||| ||| |||||||||| |||||||||||||||||| | |||||||||| |||||||||||    
T  12766086 ttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattct 12766148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 13664225 - 13664283
Alignment:
Q  346 gtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| |||||||    
T  13664225 gtggcaaggagctccttccaaggacgtatctagggaataccggattcgattatcagggg 13664283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 20525789 - 20525859
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| |||||||||| ||||||| |||||| ||||| |||||||| | |||||||||| ||||    
T  20525789 ttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccagg 20525859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 402
Target Start/End: Original strand, 28862784 - 28862846
Alignment:
Q  340 gctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||| |||||||||| ||||||||||| |||||||  |||||||| |||||||||||||||||    
T  28862784 gctccagtggcaaggagctccttccaaagacgtattcggggaatatcaggttcgattctcagg 28862846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 7866532 - 7866597
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| ||| |||||||||| |||||||||||||||||| | | |||||||| ||||||||||    
T  7866532 ttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattc 7866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 9812827 - 9812888
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||| ||| |||||||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  9812827 ttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 9812888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 12704969 - 12705030
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||| ||| |||||||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  12704969 ttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 12705030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 14152008 - 14152069
Alignment:
Q  339 ggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctca 400  Q
    ||||| |||||||||| ||||||||||| || ||| |||||||||||| |||||||||||||    
T  14152008 ggctccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattctca 14152069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 20223019 - 20223072
Alignment:
Q  344 tagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||    
T  20223019 tagtggcaaggagctccttccaaagacgtatctggggaatatcgggttcgattc 20223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 26077096 - 26077157
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| ||||| |||| |||| |||||||||||||| |||||||||| |||||||||||    
T  26077096 ttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattc 26077157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 39728342 - 39728407
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcag 401  Q
    |||||||| |||||||||| |||| ||||||| ||||| | |||||||||||||||||||| ||||    
T  39728342 ttgggctccagtggcaaggagctctttccaagaacgtacccggggaataccaggttcgattatcag 39728407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 1898956 - 1899024
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||  |||||||||| |||||||||||||| ||| | |||||||||| |||||||||| ||||||    
T  1898956 ttgggctacagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccagggg 1899024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 7308516 - 7308448
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||| ||||||||||||| |||| |||||||||||||| || |||||| | |||||||||| ||||||    
T  7308516 ttgggttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggg 7308448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 30349534 - 30349594
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| | |||||||||||||||||| |||||||||| |||| ||||    
T  30349534 ttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatt 30349594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 35403664 - 35403596
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| ||||||||||||||||||   ||| |||||| ||||||||||| |||||    
T  35403664 ttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggg 35403596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 14588772 - 14588703
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||| | ||||||||| |||||    
T  14588772 ttgcatgggctc-agtggcaaggagcttctttcaaggacgtatctggggaatatcgggttcgattttcagg 14588703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 20692888 - 20692949
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||||||| | ||| |||||||||||||| | |||||||||| |||| |||||    
T  20692888 ttgggctctagtggcaaagagcttcttccaaggacgtacccggggaataccgggtttgattc 20692949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 38897874 - 38897810
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||  ||| |||||||||| |||| || ||||||||||| ||||||||||| |||||||||    
T  38897874 ttgcttgaactcaagtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatt 38897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 375
Target Start/End: Original strand, 23383603 - 23383642
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatc 375  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  23383603 ttgggctccagtggcaaggagctccttccaaggacgtatc 23383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 12081885 - 12081931
Alignment:
Q  358 tccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||| ||||||||||| |||||||||  |||||||||||||||||    
T  12081885 tccttcaaaggacgtatccggggaatactgggttcgattctcagggg 12081931  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 23247490 - 23247437
Alignment:
Q  349 gcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||| |||| ||||||||||||| |||||||||| | |||||||||| ||||    
T  23247490 gcaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagg 23247437  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 21149717 - 21149757
Alignment:
Q  364 caaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||| || |||||||||||||||||| |||||||    
T  21149717 caaggacgtatttgaggaataccaggttcgattttcagggg 21149757  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 35561974 - 35561922
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaata 384  Q
    |||||||| ||| |||||||| | ||||||||||| |||||||| ||||||||    
T  35561974 ttgcttggactccagtggcaaagagctccttccaatgacgtatccggggaata 35561922  T

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Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 49078065 - 49078137
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| |||||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  49078065 ttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggg 49078137  T

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Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 386
Target Start/End: Complemental strand, 10173124 - 10173074
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaatacc 386  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10173124 ttgggctccagtggcaaggtgctccttccaaggacgtatctggggaatacc 10173074  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 2981088 - 2981023
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||||||    
T  2981088 ttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattc 2981023  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 25165353 - 25165424
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| | ||||||| |||||||    
T  25165353 ttgcttgggctctagtggcaaggagctccttccaa-gacgtacctggggaataccggattcgattatcagggg 25165424  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 41664009 - 41663941
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  41664009 ttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggg 41663941  T

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Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 5503986 - 5504053
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    ||||| || |||||||||| ||||||||| || |||||||||||||||| ||||||||||||||||||    
T  5503986 ttgggttccagtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgattctcaggg 5504053  T

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Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 5855477 - 5855543
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| |||||||||| |||||||||||||||||||  |||||||||| |||||||||| ||||    
T  5855477 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccagg 5855543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 11398045 - 11397980
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||| |||||||||| |||||||||||||| ||||| || ||||||| ||||||||||    
T  11398045 ttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattc 11397980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 34334445 - 34334380
Alignment:
Q  339 ggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||| ||||||||||| |||| ||||||||||||||| |||||||||| |||||||||| ||||||    
T  34334445 ggctttagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggg 34334380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 41743224 - 41743289
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| | |||||||| ||||||||||    
T  41743224 ttgcttgggctccggtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattc 41743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 15238263 - 15238191
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||||| | |||||||| |||||||||||||||||| || ||||||| | |||||||||| ||||||    
T  15238263 ttgcttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggttcgattcccagggg 15238191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 15465920 - 15465980
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||| ||| | ||||||||||||||||||| |||||||||||||||||||||    
T  15465920 ttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccaggttcgatt 15465980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 17358617 - 17358557
Alignment:
Q  343 ctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||||||| |||| || ||||||||||| ||||||||||| ||||||||||||||||    
T  17358617 ctagtggcaaggagctcatttcaaggacgtatttggggaataccgggttcgattctcaggg 17358557  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 40288634 - 40288570
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| |||||||||| |||| ||||||||||||||  |||||||||| |||||||||    
T  40288634 ttgcttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatt 40288570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 34719734 - 34719792
Alignment:
Q  339 ggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||||  ||||||||||    
T  34719734 ggctctaatggcaaggagctccttccaaggacgtacctggggaatactgggttcgattc 34719792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 45362035 - 45361969
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||  |||||||||| |||||||||||||||||| |  ||||||||| |||||||||||||||    
T  45362035 ttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcagg 45361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 34877945 - 34878006
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||  |||||||||| || ||||||||||||||||  |||||||||||||||||||||    
T  34877945 ttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattc 34878006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 47313051 - 47312990
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||| | | ||||||||||||||||||||||||||||| |||| |||||    
T  47313051 ttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattc 47312990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 8763942 - 8764014
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||  ||||||||| |||||||||||||||||| | |||||||| | |||||| ||| ||||||    
T  8763942 ttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggg 8764014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 18649509 - 18649437
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||  ||||||||| || | ||||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  18649509 ttgcttgaactctagtggtaatgagctccttccaaggacgtatctggagaatatcgggttcgattttcagggg 18649437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 18915822 - 18915890
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||  |||||||||| ||| |||||||||||||| | |||||||||| |||||||||| ||||||    
T  18915822 ttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggg 18915890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 31576700 - 31576632
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||| |||| ||| |||||||||||  |  |||||| |||||||||||||||||    
T  31576700 ttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcagggg 31576632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 34697286 - 34697358
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| || | ||||||||| |||||||||||  ||||||  |||||||||||||||||||||| |||||    
T  34697286 ttgcttggactttggtggcaaggagctccttccaaaaacgtattcggggaataccaggttcgattcttagggg 34697358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 43959974 - 43959906
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||| |||||||||||||||||||||| |||||| | |||||||| | ||||| |||| ||||||    
T  43959974 ttgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggg 43959906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 46929894 - 46929842
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaata 384  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||| |||||    
T  46929894 ttgcttgggctctagtggcaagaagctccttccaaagacgtatctggagaata 46929842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 404
Target Start/End: Complemental strand, 50503509 - 50503446
Alignment:
Q  341 ctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||| ||| ||||||| |||||||||||| |||||||| | |||||||||| ||||||    
T  50503509 ctctagtggcgaggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggg 50503446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 405
Target Start/End: Original strand, 16956432 - 16956490
Alignment:
Q  347 tggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggggt 405  Q
    |||||||| |||||||||||||||||| | ||||||||||  ||||| |||||||||||    
T  16956432 tggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggt 16956490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 48798221 - 48798163
Alignment:
Q  338 gggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||| |||||||||| ||||||||||| |||||||| |||||||| | |||||||||    
T  48798221 gggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatt 48798163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 892450 - 892389
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||  |||||||||| ||||||| |||||||||||  |||||||||| ||||||||||    
T  892450 ttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggttcgattc 892389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 5063993 - 5063948
Alignment:
Q  339 ggctctagtggcaaggtgctccttccaaggacgtatctggggaata 384  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||    
T  5063993 ggctctggtggcaagaagctccttccaaggacgtatctggggaata 5063948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 17988818 - 17988745
Alignment:
Q  330 aattgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||||| |||||||| ||| | |||||||| ||||||||| |  |||||||||||||| |||| ||||||    
T  17988818 aattgcttggactctagtgccaatgagctccttctaaggacgtaccccgggaataccaggtttgattttcaggg 17988745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 26325763 - 26325828
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    ||||| |||||| |||||||||| ||||||| |||||||||||| | |||||| | ||||||||||    
T  26325763 ttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattc 26325828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 41696754 - 41696701
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaatac 385  Q
    |||||| | |||||||||||| | |||||||||||||||||||||| |||||||    
T  41696754 ttgcttagactctagtggcaatgagctccttccaaggacgtatctgaggaatac 41696701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 10422743 - 10422803
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||  |||||||||| ||||||||||| |||||||  |||||||||| |||||||||    
T  10422743 ttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatt 10422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 14357706 - 14357770
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||| |||| |||||||||| | | |||||||||||||||||||  |||| |||||||||||    
T  14357706 ttgcttgagctccagtggcaaggagtttcttccaaggacgtatctggaaaatatcaggttcgatt 14357770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 396
Target Start/End: Original strand, 16263528 - 16263560
Alignment:
Q  364 caaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||||||||||||||||||||||||    
T  16263528 caaggacgtatctggggaataccaggttcgatt 16263560  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 30927880 - 30927820
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||| |||| | |||||||||    
T  30927880 ttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatt 30927820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 31152671 - 31152731
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||||||||||||| |||| ||||||||| ||| |  ||||||||| |||||||||    
T  31152671 ttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatt 31152731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 32151075 - 32151015
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||| ||||||||||||||||| |  | |||||| |||||||||||    
T  32151075 ttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatt 32151015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 10336480 - 10336539
Alignment:
Q  345 agtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    |||||||||| ||||||||||| |||||||| || ||||| | ||||||||| |||||||    
T  10336480 agtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggg 10336539  T

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Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 12744655 - 12744608
Alignment:
Q  357 ctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  12744655 ctccttccaaggacgtatctgaggaatatcagattcgattttcagggg 12744608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 12755645 - 12755598
Alignment:
Q  357 ctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  12755645 ctccttccaaggacgtatctgaggaatatcagattcgattttcagggg 12755598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 32826 - 32892
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||| |||||||| | |||||||||||||||||| | |||||||| | ||| |||||| ||||    
T  32826 ttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcccagg 32892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 42744738 - 42744800
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcga 394  Q
    |||||||| ||| |||||||| | |||||||||||||||||| |  ||||||||| |||||||    
T  42744738 ttgcttggactccagtggcaatgagctccttccaaggacgtacccagggaataccgggttcga 42744800  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 45726590 - 45726520
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    |||||||||||| ||| |||| |  |||| |||||||||||| | | |||||||| |||||||||||||||    
T  45726590 ttgcttgggctccagttgcaaagacctccctccaaggacgtacccgaggaatacctggttcgattctcagg 45726520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 2567242 - 2567291
Alignment:
Q  347 tggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||||||||||||  || ||||||| |||||||||    
T  2567242 tggcaaggagctccttccaaggacgtattcggagaataccgggttcgatt 2567291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 9853430 - 9853369
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| |||||||||||||| ||| | ||  |||||| ||||||||||    
T  9853430 ttgggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattc 9853369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 18808220 - 18808285
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcag 401  Q
    |||||||| |||||||| | | | |||||||||||||||||  |||||| ||||||| ||||||||    
T  18808220 ttgggctccagtggcaatgagtttcttccaaggacgtatctaaggaataacaggttcaattctcag 18808285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 33418268 - 33418207
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||| ||||||||||| |||||| | || ||||||| | ||||||||    
T  33418268 ttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattc 33418207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 402
Target Start/End: Complemental strand, 33498995 - 33498926
Alignment:
Q  333 tgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagg 402  Q
    ||||||||||| |||||||||| | |||||  ||||| ||| ||||  |||||| |||||||||||||||    
T  33498995 tgcttgggctccagtggcaaggagttccttttaaggatgtacctggaaaataccgggttcgattctcagg 33498926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 8905303 - 8905255
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaata 384  Q
    |||| |||||||||||||| ||||||||||| |||||||| || |||||    
T  8905303 ttggactctagtggcaaggagctccttccaatgacgtatccggagaata 8905255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 33004172 - 33004120
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaata 384  Q
    |||||||||||| ||||   ||| |||||||||||||||||||| ||||||||    
T  33004172 ttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaata 33004120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 1770 - 1706
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| ||| |||||||||| ||||||||||| |||||  ||||||||||||||||||||||    
T  1770 ttgcttggactcaagtggcaaggagctccttccaatgacgtgcctggggaataccaggttcgatt 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 68474 - 68542
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||||||||| |||||||||||||||||| | ||| |||| | |||||||||| ||||||    
T  68474 ttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggg 68542  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 271230 - 271158
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||| ||||||||| |||||||||||||||||| | || ||||| | |||||||||| ||||||    
T  271230 ttgcttgggctctggtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggg 271158  T

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Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 249437 - 249390
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattctcaggg 403  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  249437 gctccttctaaggacgtatttggggaataccaggttcgattctcaggg 249390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 383
Target Start/End: Complemental strand, 250169 - 250118
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaat 383  Q
    |||||||||||| |||||||||| |||| ||||||||||||| | |||||||    
T  250169 ttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 95135 - 95071
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||||||| | |||||||| |||||||||||| | ||||| ||||||||||||||||||||    
T  95135 ttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatt 95071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 12623 - 12688
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||| |||||||||||||  |||||||||||||||||  | |||||||||| ||||||||||    
T  12623 ttgcttggactctagtggcaagaagctccttccaaggacgtgcccggggaataccgggttcgattc 12688  T

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Target: scaffold0332 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 15288 - 15348
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||||||||||||| ||||||| |||||| ||| | |||||||||| |||||||||    
T  15288 ttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggttcgatt 15348  T

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Target: scaffold0384 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 5926 - 5990
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    ||||||||| ||||||||||||| ||||||| ||||| |||| | |||||||||  |||||||||    
T  5926 ttgcttgggttctagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatt 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 9389 - 9461
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgattctcagggg 404  Q
    ||||||||||||  ||  ||||| ||||||| ||||||||||  ||||||||||| |||||||||| ||||||    
T  9389 ttgcttgggctccggtaacaaggagctcctttcaaggacgtacttggggaataccgggttcgattcccagggg 9461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 8862 - 8823
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgtatc 375  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  8862 ttgggctccagtggcaaggagctccttccaaggacgtatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 12532 - 12569
Alignment:
Q  336 ttgggctctagtggcaaggtgctccttccaaggacgta 373  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  12532 ttgggctctagtggcaaggagctacttccaaggacgta 12569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 8152 - 8193
Alignment:
Q  356 gctccttccaaggacgtatctggggaataccaggttcgattc 397  Q
    |||||||||||||||||| | |||||||||| ||||||||||    
T  8152 gctccttccaaggacgtacccggggaataccgggttcgattc 8193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 26136 - 26200
Alignment:
Q  332 ttgcttgggctctagtggcaaggtgctccttccaaggacgtatctggggaataccaggttcgatt 396  Q
    |||||||| |||||||||||||   ||||||| |||||| || |||||||||||  |||||||||    
T  26136 ttgcttggactctagtggcaagaaactccttctaaggacatacctggggaatactgggttcgatt 26200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 30920 - 30864
Alignment:
Q  3 gatgaagtagaattttcggatgatgagaaagaggctgagtacaagagactgcaaaaa 59  Q
    ||||||||||| ||||| ||||||||||||||||| || |||| || | ||||||||    
T  30920 gatgaagtagagttttcagatgatgagaaagaggccgaatacaggaaaatgcaaaaa 30864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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