View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6131_high_51 (Length: 381)
Name: NF6131_high_51
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6131_high_51 |
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Alignment Details
Target: chr7 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 365
Target Start/End: Original strand, 6705611 - 6705975
Alignment:
| Q |
1 |
aaggaaagtgaaagggtgatgcatgatgatattgaggataataattaggtcctaaagatggccttaaagaagaacaagattgtgataaagaagaagatgg |
100 |
Q |
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| T |
6705611 |
aaggaaagtgaaagggtgatgcatgatgatattgaggataataattaggtcctaaagatggccttaaagaagaacaagattgtgataaagaagaagatgg |
6705710 |
T |
|
| Q |
101 |
aacataagctgtagaagaaggcatattaattgccattgagtgtggtaataatggaccaaatgcccagttatgtggtactagatgttgatgttgttgttga |
200 |
Q |
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| T |
6705711 |
aatataagatgtagaagaaggcatattaattgccattgagtgtggtaataatggaccaaatgcccagttatgtggtactagatgttgatgttgttgttga |
6705810 |
T |
|
| Q |
201 |
tgaccataggttggaccacttggcattgacatagatatggacaaggacgaagaagatgaggaagatgtcgtttgttcgaaaaacaaagaagaattaaaat |
300 |
Q |
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| T |
6705811 |
tgaccataggttggaccacttggcattgacatagatatggacaaggacgaagaagatgaggaagatgtcgtttgttcaaaaaacaaagaagaattaaaat |
6705910 |
T |
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| Q |
301 |
ttgagcaacctctggtcgatggttgctccaaattgggccgcgaagcagcccaatttgttggtaac |
365 |
Q |
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| T |
6705911 |
ttgagcaacctctggtcgatggttgctccaaattgggccgcgaagcagcccaatttgttggtaac |
6705975 |
T |
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