View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6131_high_66 (Length: 331)
Name: NF6131_high_66
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6131_high_66 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 9124809 - 9124480
Alignment:
| Q |
1 |
agtattaagccacatctttcatctaaaccatnnnnnnnnttagccttgacatcttccttaatgacatctgacaaagaaactccataattctcaagctggc |
100 |
Q |
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| T |
9124809 |
agtattaagccacatctttcatctaaaccataaaaaaa-ttagccttgacatcttccttaatgacatctgacaaagaaactccataattctcaagctggc |
9124711 |
T |
|
| Q |
101 |
tttaagttatcaaagatactaaaga---------atgagcatgagaagagatttcaatattaataaatatactctcgtcattgaatctcaaagtgaggaa |
191 |
Q |
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| T |
9124710 |
tttaagttatcaaagatactaaagatactaaagaatgagcatgagaagagatttcaatattaataaatatactctcgtcattgaatctcaaagtgaggaa |
9124611 |
T |
|
| Q |
192 |
aaccatccaaaaaagtacatttatttcaaaatttatcatatttgtattataatgaacttgaaaattgttatccaacgatactatatgattgattgaatga |
291 |
Q |
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|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9124610 |
aagcatccaaaaaagtatatttatttcaaaatttatcatatttgtattataatgaacttgaaaattgttatccaacgatactatatgattgattgaatga |
9124511 |
T |
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| Q |
292 |
tcctaaaattactaatacatgctagaataat |
322 |
Q |
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|||||||||||| |||||||||||||||||| |
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| T |
9124510 |
tcctaaaattacgaatacatgctagaataat |
9124480 |
T |
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