View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6131_high_77 (Length: 316)
Name: NF6131_high_77
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6131_high_77 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 38808764 - 38808457
Alignment:
| Q |
1 |
caaaatatagaacgag--cattgagcacaaaccaaattgaaggaagataatcttccttgaatgtatgtgctgaatagaaaattccgtggacaataacaat |
98 |
Q |
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| T |
38808764 |
caaaatatagaacgagagcattgagcacaaaccaaattgaaggaagataatcttccttgaatgtatgtgctgaatagaaaattccgtggacaataacaat |
38808665 |
T |
|
| Q |
99 |
ttccaactaattatgatattttgttacagtcaactacaattgttggaacttgaaagtagaaggaaacaaaaggaaaagttgnnnnnnngagacaaactgg |
198 |
Q |
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| T |
38808664 |
ttccaactaattatgatcttttgttacagtcaactacaattgttggaacttgaaagtagaaggaaacaaaaggaaaagttgaaaaaaagagacaaactgg |
38808565 |
T |
|
| Q |
199 |
taccataaccaagtaaacaattccttaaacaaaaatattatattatcatctgtccagaagctagcatcatatcaggtttttggaatcatgtattgtaaga |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
38808564 |
taccataaccaagtaaacaattccttaaacaaaaatattatattatcatctgtccagaagctagcatcatatcatgtttttggaatcatgtattgtaaga |
38808465 |
T |
|
| Q |
299 |
catctgtg |
306 |
Q |
| |
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|||||||| |
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| T |
38808464 |
catctgtg |
38808457 |
T |
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