View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6131_low_100 (Length: 278)
Name: NF6131_low_100
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6131_low_100 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 8430786 - 8431030
Alignment:
| Q |
13 |
agcaaaggaacatggacatgaatcaaaactgaagagttcatcggtgtaccctgaagaaggatctaagaaaacaggaccagagaaagtgagaaagggaaag |
112 |
Q |
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| T |
8430786 |
agcaaaggaacatggacatgaatcaaaactgaagagttcatcggtgtaccctgaagaaggatctaagaaaacaggaccagagaaagtgagaaagggaaag |
8430885 |
T |
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| Q |
113 |
aaatcatggaaaagttccctggtttcatggtggaaaattgacaagaaaagcaaggataaagaaacaaccaacaagaattctatagctaaagtttctgaga |
212 |
Q |
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| T |
8430886 |
aaatcatggaaaagttcactggtttcatggtggaaaattgacaagaaaagcaaggataaagaaacaaccaacaagaattctatagctaaagtttctgaga |
8430985 |
T |
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| Q |
213 |
aaagacaaggtcatgtttctggtccaatacttaactcctacaaag |
257 |
Q |
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| T |
8430986 |
aaagacaaggtcatgtttctggtccaatacttaactcctacaaag |
8431030 |
T |
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