View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6131_low_103 (Length: 269)
Name: NF6131_low_103
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6131_low_103 |
 | |
|
| [»] chr2 (13 HSPs) |
| |
|
Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 16657311 - 16657566
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
16657311 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatcgctggccttaatgtcattcgaattatc |
16657410 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16657411 |
aatgaacctactgctgcagctattgcatatggtcttgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
16657510 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgcc |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16657511 |
ttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgcc |
16657566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 266
Target Start/End: Original strand, 16661787 - 16662038
Alignment:
| Q |
15 |
aatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatca |
114 |
Q |
| |
|
||||| ||||| ||||| || ||||| || || ||||| ||||||||||||||||| |||||||||||||||||||||||||| || | | || |||| |
|
|
| T |
16661787 |
aatgcagttgtcactgttcctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaacgttgtgaggataatca |
16661886 |
T |
|
| Q |
115 |
atgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttt |
214 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||||||| |||||| ||||||||||| || | ||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
16661887 |
atgaacccactgcagcagctattgcatatggccttgacaaaagaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttt |
16661986 |
T |
|
| Q |
215 |
tgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccact |
266 |
Q |
| |
|
|||||||||| |||| |||||||| |||||||| ||||| || ||||||||| |
|
|
| T |
16661987 |
tgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccact |
16662038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 43625786 - 43625560
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||| || ||| | ||| |
|
|
| T |
43625786 |
gaatgcagttgttaccgtgcctgcttacttcaatgattctcagcgaaaagccaccatagatgttggtgtcattgtcggccttaatgttttacgagtaatc |
43625687 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||| || ||||| ||| | ||||| || || ||||||||| | |||||| ||| |||| |||||||| ||||||||||||| |||||||||| |
|
|
| T |
43625686 |
aatgaaccaacagctgctgctctagcatacggccttaacaagagaattaattgtgttggagaacgaaatattttcatctttgaccttggtggtggtactt |
43625587 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||||||||||||| ||||||||||||| |
|
|
| T |
43625586 |
ttgatgtgtctatacttacaattaagg |
43625560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 7542600 - 7542373
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| ||||||||||| || ||||| || |||||||| || ||||||||||| |||||||| ||||||||||||||||| ||||| | | || |
|
|
| T |
7542600 |
gaatgcagttgttactgtacctgcttattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgttatgagggcaatg |
7542501 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||||||||| |||||| |||||||||| |||||||||||| ||||| |||||| | || ||||||||||| ||||| ||||||||||| |||| |
|
|
| T |
7542500 |
aatgaacctactgccgcagctgttgcatatggccttgacaagagaactgattatgatggagagcgaaatatttttgtttttgatcttggcggtggcactt |
7542401 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaaggg |
241 |
Q |
| |
|
||||||||||| | || || |||||||| |
|
|
| T |
7542400 |
ttgatgtgtctttactaacgattaaggg |
7542373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 14703782 - 14703555
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||| ||||| ||||| || | |||||| || |||||||||| || |||||||||| ||||| ||||| ||||| | | | || |
|
|
| T |
14703782 |
gaatgcagttgttacggtgcctgcttattttagtgattctcaaagaaaagccactatggatgctggtgttattgccggcctcaatgttatgagggtaatg |
14703683 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||||| ||||| || ||| |||| ||||| ||||||||||| ||||| |||||||||| |
|
|
| T |
14703682 |
aatgaacctacagctgcagctattgcatatggccttgacaagagaactgattatggtggagaacgtaatatatttgtctttgatcttggtggtggtactt |
14703583 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaaggg |
241 |
Q |
| |
|
|||| |||||| |||| ||||||||||| |
|
|
| T |
14703582 |
ttgacgtgtctctcctaacaattaaggg |
14703555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 12235063 - 12234842
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||| ||||| ||||| ||||||||||| || |||||||| || ||||||||||||| |||||||||||| ||||| | | | || |
|
|
| T |
12235063 |
gaatgcagttgttaccgtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgtcattgctggcctcaatgttatgagggtaatg |
12234964 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|| ||||| | || || ||| ||||||||||| |||||||||||| |||||||| ||| |||| ||||||||||| ||||| || |||||||| |||| |
|
|
| T |
12234963 |
aacgaacccatggcagccgctgttgcatatggtcttgacaagagaactgattgtgttggagaacgaaatatttttgtttttgatctcggcggtggcactt |
12234864 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaat |
235 |
Q |
| |
|
||||||||||| |||| ||||| |
|
|
| T |
12234863 |
ttgatgtgtctctcctaacaat |
12234842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 11999768 - 11999542
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
||||| |||||||||||| |||||||| || | |||||| || ||||||||||| |||||||| ||||| ||||||||| | ||||| | | | || |
|
|
| T |
11999768 |
gaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatg |
11999669 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||| ||||||||| || |||||||||| ||||||||||| |||||||| ||| || | || ||||| |||||||| ||||||||||| |||| |
|
|
| T |
11999668 |
aatgaacccactgctgcaactgttgcatatggccttgacaagagagctgattgtgttggagaaagaaacattttagtctttgatcttggcggtggcactt |
11999569 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||||| ||||||| || |||||||||| |
|
|
| T |
11999568 |
ttgatttgtctatactaacaattaagg |
11999542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 12245200 - 12245426
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||||||||||||||| || ||||| || | |||||| ||||||||||| || ||||||||||| | |||||||| || ||||| | | | || |
|
|
| T |
12245200 |
gaatgctgttgttactgtacctgcttattttagtgattctcagcgaaaagcaacgatagatgctggctcaattgctggtctcaatgttatgagggtaatg |
12245299 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||| |||||||||||| |||||||||| |||| |||||| |||||||| ||| || | || |||||||| ||||| ||||| ||||| |||| |
|
|
| T |
12245300 |
aatgaacccactgctgcagctgttgcatatggccttgaaaagagagctgattgtgttggagaaagaaacatttttgtgtttgatcttggtggtggcactt |
12245399 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
|||| || |||||||| || ||||||| |
|
|
| T |
12245400 |
ttgacgtttctatcctaactattaagg |
12245426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 12258475 - 12258585
Alignment:
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||| |||| | |||||| | ||||||||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
12258475 |
aatgaacctactgctgcagcttttgcatatggccttgacaaaagaattaattgtgtcgaaaaacggaatatttttgtctttgatcttggtggtggcactt |
12258574 |
T |
|
| Q |
214 |
ttgatgtgtct |
224 |
Q |
| |
|
||||||||||| |
|
|
| T |
12258575 |
ttgatgtgtct |
12258585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 17716487 - 17716626
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| ||||||||||| || |||||||| ||| ||| ||| || |||| || | |||||||||| |||||||| |||||| || | ||||||| |
|
|
| T |
17716487 |
gaatgccgttgttactgtccctgcttactttaatttttctcagagacaagctactaagcatgctggtgctattgctggtcttaatttcatgagaattatt |
17716586 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgaca |
153 |
Q |
| |
|
||||| || ||||||||||| ||||| |||||| |||||| |
|
|
| T |
17716587 |
aatgagcccactgctgcagccattgcttatggttttgaca |
17716626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 17704013 - 17704043
Alignment:
| Q |
190 |
tctttgaccttggcggtggtacttttgatgt |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
17704013 |
tctttgaccttggcggtggtacttttgatgt |
17704043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 273279 - 273316
Alignment:
| Q |
183 |
atttttgtctttgaccttggcggtggtacttttgatgt |
220 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
273279 |
attttggtctttgaccttggaggtggtacttttgatgt |
273316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 17648005 - 17648041
Alignment:
| Q |
190 |
tctttgaccttggcggtggtacttttgatgtgtctat |
226 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||| |
|
|
| T |
17648005 |
tctttgaccttggcggtggtacttttgacgtctctat |
17648041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 176; Significance: 7e-95; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 13333250 - 13333501
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| || ||||||| ||| |
|
|
| T |
13333250 |
gaatgccgttgttactgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggccttaatatcattcgaataatc |
13333349 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||||| || || |||||||||| |
|
|
| T |
13333350 |
aatgaacctactgctgcagctattgcatatggccttgacaagagacgtgattgtgatggtaagcgaaatatttttgtctttgatctgggtggtggtactt |
13333449 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccac |
265 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |
|
|
| T |
13333450 |
ttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccac |
13333501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 10494168 - 10494422
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||| || ||||| || || || ||||||||||| |||||||||||||||||| |||| || ||| |
|
|
| T |
10494168 |
gaatgctgttgttactgtgccggcttacttcaacgattctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtcattcggataatc |
10494267 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||| || || |||||||||| |
|
|
| T |
10494268 |
aatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatctgggtggtggtactt |
10494367 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgc |
268 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
10494368 |
ttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgc |
10494422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 266
Target Start/End: Complemental strand, 8659737 - 8659485
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| ||| || || |
|
|
| T |
8659737 |
gaatgctgttgttacagtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtcattcagataatt |
8659638 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |
|
|
| T |
8659637 |
aatgaacctactgctgcagctattgcatatggttttgacaagagaggtgactgtgatggtaaacaaaatattttggtctttgatcttggtggtggtactt |
8659538 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccact |
266 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |
|
|
| T |
8659537 |
ttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccact |
8659485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 1301837 - 1301581
Alignment:
| Q |
15 |
aatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatca |
114 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| || || | |
|
|
| T |
1301837 |
aatgctgttgttactgtgcctgcacatttcaatgattctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgtcattcagataatta |
1301738 |
T |
|
| Q |
115 |
atgaaccta----ctgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggta |
210 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1301737 |
atgaacctagctactgctgcagctattgcgtatggttttgacaagagaagtgactgtgatggtaaacggaatattttggtctttgaccttggcggtggta |
1301638 |
T |
|
| Q |
211 |
cttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactg |
267 |
Q |
| |
|
|||||||||||||||||||||| || ||||| ||||| ||||| ||||||||||||| |
|
|
| T |
1301637 |
cttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccactg |
1301581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 8667793 - 8667539
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||||| ||||||||| |||| || ||| |
|
|
| T |
8667793 |
gaatgccgttgttactgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggacttaatgtcattcggataatc |
8667694 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||| || ||||||||||||||||| || || || || |||| |
|
|
| T |
8667693 |
aatgaacctactgcggcagctattgcatatggccttgacaagagaaatgactgtgatggtagccgaaatatttttgtctttgatctgggtggcgggactt |
8667594 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgc |
268 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
8667593 |
ttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgc |
8667539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 21 - 268
Target Start/End: Complemental strand, 8654817 - 8654570
Alignment:
| Q |
21 |
gttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaac |
120 |
Q |
| |
|
|||||||||||||| || ||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||||| ||| |||| || ||||||||| |
|
|
| T |
8654817 |
gttgttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattgctggacttaacgtcattcggatactcaatgaac |
8654718 |
T |
|
| Q |
121 |
ctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgt |
220 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| ||||| | | ||||||||||||||||||||| || ||||| ||||| ||||||||||||||||| |
|
|
| T |
8654717 |
ctactgccgcagctattgcatatggccttgacaagcgaagtaactatgatggtaaacggaatattttggtatttgatcttggtggtggtacttttgatgt |
8654618 |
T |
|
| Q |
221 |
gtctatccttacaattaagggtgatgtttttgaggtaaaagccactgc |
268 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
8654617 |
gtctatactcacaattaagggtgatgtctttgacgtaaaagccactgc |
8654570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 262
Target Start/End: Original strand, 8585501 - 8585748
Alignment:
| Q |
15 |
aatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatca |
114 |
Q |
| |
|
||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | | || |||| |
|
|
| T |
8585501 |
aatgcagttgtgactgtgcctgcttatttcaatgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatca |
8585600 |
T |
|
| Q |
115 |
atgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttt |
214 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||| | | || | ||||||||| |||| ||||||||||| ||||| ||||| ||||| ||||| |
|
|
| T |
8585601 |
atgaacccactgctgcagctattgcatatggccttgacaacaaaggtaactgtgatggtgaacgaaatatttttgtgtttgatcttggtggtgggacttt |
8585700 |
T |
|
| Q |
215 |
tgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagc |
262 |
Q |
| |
|
|||||||||| |||| |||||||| |||||||| ||||| || ||||| |
|
|
| T |
8585701 |
tgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagc |
8585748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 17268315 - 17268087
Alignment:
| Q |
12 |
atgaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaatta |
111 |
Q |
| |
|
||||||||||| ||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| || | | |
|
|
| T |
17268315 |
atgaatgctgtcattactgtcccggcttacttcaacgattctcagcgaaaagccaccatagatgctggtgtcattgctggccttaatgtattgaaggtaa |
17268216 |
T |
|
| Q |
112 |
tcaatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtac |
211 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||| |||||||| | | |||| || |||||||||||||||||||||||||||| ||||| || |
|
|
| T |
17268215 |
tcaatgaaccaactgctgcagctattgcatatggccttggcaagagaactaactgtgttgaagaacggaatatttttgtctttgaccttggtggtgggac |
17268116 |
T |
|
| Q |
212 |
ttttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||||||||||||| || |||||||||||| |
|
|
| T |
17268115 |
ttttgatgtgtctctcgttacaattaagg |
17268087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 268
Target Start/End: Complemental strand, 8628905 - 8628652
Alignment:
| Q |
15 |
aatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatca |
114 |
Q |
| |
|
||||| ||||| || ||||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| | | || |||| |
|
|
| T |
8628905 |
aatgcagttgtcaccgtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtgccattgctggccttaatgttatgaggataatca |
8628806 |
T |
|
| Q |
115 |
atgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttt |
214 |
Q |
| |
|
|||| || ||||||||||||||||||||||| ||||||| | | || ||||||||| |||| ||||||||||| ||||| ||||| ||||| ||||| |
|
|
| T |
8628805 |
atgaccccactgctgcagctattgcatatggccttgacaacaaaggtaggtgtgatggtgaacgaaatatttttgtgtttgatcttggtggtgggacttt |
8628706 |
T |
|
| Q |
215 |
tgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgc |
268 |
Q |
| |
|
|||||||||| |||| |||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
8628705 |
tgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgc |
8628652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 8671424 - 8671606
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||| | |||||||| ||||||||| |||| || ||| |
|
|
| T |
8671424 |
gaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgtcattcggataatc |
8671523 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttga |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| ||| |||| ||||| || ||||||||||||||||| |
|
|
| T |
8671524 |
aatgaacctactgctgcagctattgcatatggccttgacaagagaaatgaccgtgaaggtaaccgaaatatttttgtctttga |
8671606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 17260614 - 17260389
Alignment:
| Q |
15 |
aatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaatt-atc |
113 |
Q |
| |
|
|||| |||| ||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| ||| | || || |
|
|
| T |
17260614 |
aatgttgttattactgttcctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgttattgctggcctttatgt-tttgaagttaatt |
17260516 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||| |||||||| | |||||| | ||||||||||||||||||||||||||| || || |||| |
|
|
| T |
17260515 |
aatgaacctattgctgcagctattgcatatggccttgtcaagagaactaattgtgtttaagtacggaatatttttgtctttgaccttggtggggggactt |
17260416 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||||||||||| || |||||||||||| |
|
|
| T |
17260415 |
ttgatgtgtctctcgttacaattaagg |
17260389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 8647251 - 8647025
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||||||||| || ||||||||||||| |||||||||||||| |||||||| || |||||||||||||||||| || | || || ||| |
|
|
| T |
8647251 |
gaatgcagttgttactgtgcctgcatacttcaatgattatcagcgaaaagccactatagatgccggggccattgctggccttaatatcatccggataatc |
8647152 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||| || ||||| ||| | |||||||| |||||||||||| |||||| || |||| ||||| || |||| |||||||| ||||| |||| |
|
|
| T |
8647151 |
aatgaaccaacagctgctgctctcgcatatggccttgacaagagaacaaattgtgctgaagaacgaaatatattcatcttcgaccttggtggtggaactt |
8647052 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||||||||||| ||||||||||||||| |
|
|
| T |
8647051 |
ttgatgtgtctctccttacaattaagg |
8647025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 6789885 - 6789673
Alignment:
| Q |
15 |
aatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatca |
114 |
Q |
| |
|
||||| ||| |||||||||| ||||| ||||||||||| || || |||||||| |||||||||||||||||||||| |||||||| | ||||| |||| |
|
|
| T |
6789885 |
aatgcagttattactgtgcctgcttatttcaatgattctcaacggaaagccactttagatgctggtgccattgctggtcttaatgttatacgaataatca |
6789786 |
T |
|
| Q |
115 |
atgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttt |
214 |
Q |
| |
|
||||||| || ||||| ||| |||||||||| |||| ||||||| | ||| | ||| || |||||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
6789785 |
atgaaccaacagctgctgctcttgcatatggccttgataagagaactaattacggtggagaaaaaaatattttcgtcttcgaccttggtggtggcacttt |
6789686 |
T |
|
| Q |
215 |
tgatgtgtctatc |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6789685 |
cgatgtgtctatc |
6789673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 27830685 - 27830895
Alignment:
| Q |
30 |
gtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctg |
129 |
Q |
| |
|
||||||||||| |||||||| || || ||||||||||| ||||| | ||||||||||||||||||||||| | || || || | || |||||||||| |
|
|
| T |
27830685 |
gtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgttatgcggataataagcgagcctactgctg |
27830784 |
T |
|
| Q |
130 |
cagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatcct |
229 |
Q |
| |
|
|||||||||||||||| |||||| | ||| | | | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| | | |
|
|
| T |
27830785 |
cagctattgcatatggccttgacacgggaacaaaatatactggagaacggaatatttttgtgtttgaccttggtggtgggacttttgatgtgtctcttgt |
27830884 |
T |
|
| Q |
230 |
tacaattaagg |
240 |
Q |
| |
|
||||||||||| |
|
|
| T |
27830885 |
tacaattaagg |
27830895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 8636148 - 8636268
Alignment:
| Q |
25 |
ttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctac |
124 |
Q |
| |
|
|||||||||| ||||| ||||||||||| ||||| ||| |||||| |||||||||||||||||| ||||||||||| |||| || ||||||||||| || |
|
|
| T |
8636148 |
ttactgtgcccgcttatttcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgtaattcggataatcaatgaaccaac |
8636247 |
T |
|
| Q |
125 |
tgctgcagctattgcatatgg |
145 |
Q |
| |
|
|||||||||| |||| ||||| |
|
|
| T |
8636248 |
tgctgcagcttttgcgtatgg |
8636268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 8576686 - 8576475
Alignment:
| Q |
28 |
ctgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgc |
127 |
Q |
| |
|
||||||| ||||| || |||||||| || |||| |||||| | |||||| ||||| |||||||| || |||||| | | || ||||||||||| ||||| |
|
|
| T |
8576686 |
ctgtgcctgcttattttaatgattcccaacgaagagccactaaagatgcaggtgcaattgctggtctcaatgtcatgcagataatcaatgaaccgactgc |
8576587 |
T |
|
| Q |
128 |
tgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatc |
227 |
Q |
| |
|
|||||| |||| ||||| || | |||||| | |||||| || |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8576586 |
ggcagctcttgcgtatggccttcaaaagagagctaattgtgttgataaaagaaatatttttatctttgaccttggcggtggaacttttgatgtgtctatt |
8576487 |
T |
|
| Q |
228 |
cttacaattaag |
239 |
Q |
| |
|
|| ||| ||||| |
|
|
| T |
8576486 |
ctcacagttaag |
8576475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 3147646 - 3147412
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||| || || ||||| ||||||||| | ||||| ||||| || ||||||||||||| ||||||||||||||| | | || || ||| |
|
|
| T |
3147646 |
gaatgcagttgttaccgtacctgcttatttcaatgatgctcagcggaaagcgacaatagatgctggtgttattgctggccttaatattatgcggataatc |
3147547 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtg--atggt------aaacggaatatttttgtctttgaccttggcgg |
205 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| | |||||||||| | |||||| || || | || ||||||||| |||||||| | || || |
|
|
| T |
3147546 |
aatgaacctactgctgcagctattgcgtatggactggacaagagaactaattgtgtaattgtgtagaggagcgtaatatttttatctttgacttgggtgg |
3147447 |
T |
|
| Q |
206 |
tggtacttttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
3147446 |
tgggacttttgatgtgtctcttcttacaattaagg |
3147412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 8610278 - 8610067
Alignment:
| Q |
27 |
actgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactg |
126 |
Q |
| |
|
|||||||| ||||| || |||||||| ||||| |||||||| | ||||||||||| |||| ||||||||||||| | || |||||||||||||| || | |
|
|
| T |
8610278 |
actgtgcctgcttattttaatgattctcagcggaaagccacaaaagatgctggtgtcatttctggccttaatgtaatccggattatcaatgaaccaacgg |
8610179 |
T |
|
| Q |
127 |
ctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaa-cggaatatttttgtctttgaccttggcggtggtacttttgatgtgtcta |
225 |
Q |
| |
|
|||| ||| ||||||||||| || | |||||| | |||||| ||| ||| | ||||||||| ||||||| ||||| ||||| ||||| ||||||||| |
|
|
| T |
8610178 |
ctgcggctcttgcatatggtcttcagaagagagctaattgtg-tggaaaatagaaatatttttatctttgatcttggtggtgggactttcgatgtgtctg |
8610080 |
T |
|
| Q |
226 |
tccttacaattaa |
238 |
Q |
| |
|
| || |||||||| |
|
|
| T |
8610079 |
ttctcacaattaa |
8610067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 240
Target Start/End: Complemental strand, 8570674 - 8570459
Alignment:
| Q |
25 |
ttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctac |
124 |
Q |
| |
|
||||||| || ||||| || |||||||| || |||| |||||| | |||||| |||| |||||||| || ||||| | || || ||||||||||| || |
|
|
| T |
8570674 |
ttactgtacctgcttattttaatgattcacaacgaagagccactaaagatgcaggtgaaattgctggtctcaatgtaatgcggataatcaatgaaccgac |
8570575 |
T |
|
| Q |
125 |
tgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtct |
224 |
Q |
| |
|
||| |||||| |||||||||| || | |||||| | ||| || || ||| | ||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8570574 |
tgcggcagctcttgcatatggccttcaaaagagagctaattttgttgataagagaaatatttttatctttgaccttggcggtggaacttttgatgtgtct |
8570475 |
T |
|
| Q |
225 |
atccttacaattaagg |
240 |
Q |
| |
|
|| || ||| |||||| |
|
|
| T |
8570474 |
attctcacagttaagg |
8570459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 8602348 - 8602217
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||||||||| ||||| || |||||||| |||||||||||||| | ||||||||||||||||||||| || ||||| | || || ||| |
|
|
| T |
8602348 |
gaatgcagttgttactgtgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgtaatgcggataatc |
8602249 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatgg |
145 |
Q |
| |
|
||||| || ||||| || ||| |||||||||| |
|
|
| T |
8602248 |
aatgagccaactgcagctgctcttgcatatgg |
8602217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 8640341 - 8640425
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaat |
98 |
Q |
| |
|
|||||| ||||||||| |||| |||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
8640341 |
gaatgcagttgttactatgcctgcttacttcaatgattatcagcaaaaagccaccatagatgccggggccattgctggccttaat |
8640425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 224
Target Start/End: Original strand, 29581646 - 29581845
Alignment:
| Q |
25 |
ttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctac |
124 |
Q |
| |
|
|||| ||||| ||||| ||||||||||| |||||||||||||||| ||||||||| || |||||||| ||||| | | || ||||| ||||| || |
|
|
| T |
29581646 |
ttaccgtgcctgcttatttcaatgattctcagcgaaaagccaccaaagatgctggcattatagctggcctcaatgtaatgaggataatcaacgaaccaac |
29581745 |
T |
|
| Q |
125 |
tgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtct |
224 |
Q |
| |
|
|||||| || |||||||||||||| | ||| || || ||| || ||| ||||| ||||| || ||||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
29581746 |
tgctgctgcacttgcatatggtattcaaaagggaggtaattttgttggaaaacgaaatatattcatctttgatcttggtggtggcacttttgatgtgtct |
29581845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 8538388 - 8538282
Alignment:
| Q |
36 |
gcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctgcagcta |
135 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||||| ||||||||||| |||||||||||| ||||| | || || |||||||||||||| ||||| ||| |
|
|
| T |
8538388 |
gcttatttcaatgattcacagcgaagagccaccaaagatgctggtgtcattgctggcctcaatgtaatgcggataatcaatgaacctacagctgctgctc |
8538289 |
T |
|
| Q |
136 |
ttgcata |
142 |
Q |
| |
|
||||||| |
|
|
| T |
8538288 |
ttgcata |
8538282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 239
Target Start/End: Complemental strand, 8582063 - 8581849
Alignment:
| Q |
25 |
ttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctac |
124 |
Q |
| |
|
||||||| || ||||| || |||||||| || |||| |||||| | |||||| |||| ||||| || || ||||| | || || ||||||||||| || |
|
|
| T |
8582063 |
ttactgtacctgcttattttaatgattcacaacgaagagccactaaagatgcaggtgaaattgcaggtctcaatgtaatgcggataatcaatgaaccgac |
8581964 |
T |
|
| Q |
125 |
tgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtct |
224 |
Q |
| |
|
||| |||||| |||||||||| || | |||||| | |||||| || ||| | ||||||||| ||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
8581963 |
tgcggcagctcttgcatatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggaggtggaacttttgatgtgtct |
8581864 |
T |
|
| Q |
225 |
atccttacaattaag |
239 |
Q |
| |
|
|| || ||| ||||| |
|
|
| T |
8581863 |
attctcacagttaag |
8581849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 39986020 - 39985878
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||||||||||||||| || |||||||| ||||| || ||||| |||| |||| |||||||| | ||||| || ||||||||| | ||||||||| |
|
|
| T |
39986020 |
gaatgctgttgttactgtccctgcttactttaatgactcccagcgtcaagctaccaaggatgctggagttattgccggtcttaatgtcatgcgaattatc |
39985921 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaaga |
156 |
Q |
| |
|
||||| || |||||||| || ||||| |||||| ||||||||| |
|
|
| T |
39985920 |
aatgagcccactgctgctgccattgcttatggtcttgacaaga |
39985878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 7877527 - 7877658
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||||||||| || ||||||||||| | |||||||||||| |||| ||||| ||||| | || || || |
|
|
| T |
7877527 |
gaatgcagttgttactgtgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgttatgcggataatt |
7877626 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatgg |
145 |
Q |
| |
|
|||||||| |||||||| || |||||||||| |
|
|
| T |
7877627 |
aatgaaccaactgctgctgcccttgcatatgg |
7877658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 29577479 - 29577720
Alignment:
| Q |
30 |
gtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctg |
129 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||| |||||| || ||||||||||| ||||| | || || ||||||||||| ||||||| |
|
|
| T |
29577479 |
gtgccagcttatttcaatgattctcagcgaaaagccaccaaagatgccggcattattgctggcctcaatgtaatgcggataatcaatgaaccaactgctg |
29577578 |
T |
|
| Q |
130 |
cagctattgcatatggtattgacaagagaagtgatt---gtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctat |
226 |
Q |
| |
|
| || |||||||||| ||| | |||||| || ||| || ||| || || ||| | || ||||||| ||||| ||||| || |||||||||||| | |
|
|
| T |
29577579 |
ctgcacttgcatatggaattcaaaagagaggtaattttgttgttggaaagcgaaatgtattcatctttgatcttggtggtggcacctttgatgtgtctct |
29577678 |
T |
|
| Q |
227 |
ccttacaattaagggtgatgtttttgaggtaaaagccactgc |
268 |
Q |
| |
|
|| ||| |||||| |||| |||||| ||||| |||||||| |
|
|
| T |
29577679 |
tctcacacttaaggatgatagttttgaagtaaaggccactgc |
29577720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 8382677 - 8382895
Alignment:
| Q |
21 |
gttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaac |
120 |
Q |
| |
|
|||||||| ||||| || || ||||||||||| || || |||||||| | |||||||||||| ||||||||||| ||||| | || || |||||||| | |
|
|
| T |
8382677 |
gttgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgtaatgcggataatcaatgagc |
8382776 |
T |
|
| Q |
121 |
ctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgt |
220 |
Q |
| |
|
| ||||| || ||| |||||||||| || | |||||| | ||||| || | | |||||||| ||||||| ||||| ||||| ||||||||||| |
|
|
| T |
8382777 |
caactgccgctgctcttgcatatggccttcagaagagagctaattgtcttgaagagagaaatattttcatctttgatcttggtggtggaacttttgatgt |
8382876 |
T |
|
| Q |
221 |
gtctatccttacaattaag |
239 |
Q |
| |
|
|||| |||| ||||||||| |
|
|
| T |
8382877 |
gtctctcctcacaattaag |
8382895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 8545841 - 8545783
Alignment:
| Q |
180 |
aatatttttgtctttgaccttggcggtggtacttttgatgtgtctatccttacaattaa |
238 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
8545841 |
aatatttttatctttgaccttggcggtggaacttttgatgtgtctattcttacaattaa |
8545783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 8017207 - 8017332
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||| || |||||||||||||||||||||||||| ||||||| | ||||| |||| |||||| || || ||||| || |||||||| |
|
|
| T |
8017207 |
gaatgccgttgttacagttccagcttacttcaatgattcgcagcgtcaagccacaaaggatgccggtgtcattgcaggactcaatgttttgagaattatc |
8017306 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgc |
139 |
Q |
| |
|
|| || || || |||||||||||||| |
|
|
| T |
8017307 |
aacgagccaacagctgcagctattgc |
8017332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 8591012 - 8590934
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggc |
92 |
Q |
| |
|
|||||| |||||||||||||||||||| || |||||||| ||| | ||||| |||| ||||||||||| |||||||||| |
|
|
| T |
8591012 |
gaatgcagttgttactgtgccagcttattttaatgattctcagaggaaagctaccaaagatgctggtgtcattgctggc |
8590934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 8103041 - 8102901
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| || || ||||| || ||||||||||||||||| ||||| |||| || | ||||||||||| || ||||| | ||||| || ||||||| |
|
|
| T |
8103041 |
gaatgccgtcgtcactgtccctgcttacttcaatgattctcagcgtcaagcaactaaagatgctggtgttatcgctggtttaaatgttttgagaattatt |
8102942 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaa |
154 |
Q |
| |
|
||||| || |||||||| |||||||| || ||| ||||||| |
|
|
| T |
8102941 |
aatgagccaactgctgctgctattgcctacggtcttgacaa |
8102901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 156; Significance: 6e-83; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 9335685 - 9335936
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||||||||||||||| |||| || ||| |
|
|
| T |
9335685 |
gaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggccttaatgtcattcggataatc |
9335784 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||| || ||||||||||||||||| || || || ||||||| |
|
|
| T |
9335785 |
aatgaacctactgctgcagctattgcatatggccttgataagagaaatgactgtgatggtaaccgaaatatttttgtctttgatctgggtggcggtactt |
9335884 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccac |
265 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| | ||||| ||||||||||| |
|
|
| T |
9335885 |
ttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccac |
9335936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 224
Target Start/End: Complemental strand, 30775613 - 30775416
Alignment:
| Q |
27 |
actgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactg |
126 |
Q |
| |
|
|||||||| ||||| ||||||||| | |||||||||||||| || |||||||||||||||||||| |||||||| | |||| || ||||| || |||| |
|
|
| T |
30775613 |
actgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactg |
30775514 |
T |
|
| Q |
127 |
ctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtct |
224 |
Q |
| |
|
| ||||||||||||||||| |||| |||||| || ||||||| | | ||||||||||||||||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
30775513 |
cagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtct |
30775416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 35132822 - 35132596
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||||||||| ||||| || | |||||| || ||||||||||| |||||||||||||| |||||||| | ||||| | || | || |
|
|
| T |
35132822 |
gaatgcagttgttactgtgcctgcttattttagtgattctcaacgaaaagccactatagatgctggtgctattgctggtcccaatgttatgagagtaatg |
35132723 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| ||||||||||| |||||||| ||| ||| |||||||||||||| || ||||| ||||| |||| |
|
|
| T |
35132722 |
aatgaacctactgccgcagcggttgcatatggccttgacaagagatctgattgtgctggagaacaaaatatttttgtcttcgatcttggtggtggcactt |
35132623 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||||||| || || ||||| ||||||| |
|
|
| T |
35132622 |
ttgatgtttcaatacttactattaagg |
35132596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 23587527 - 23587669
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||| ||||| || || |||| || | |||||| |||| |||| |||| || ||||| || ||||||| |
|
|
| T |
23587527 |
gaatgccgttgtaactgtgcctgcttacttcaacgattcacaacgtcaagctacaaaagatgccggtgtcatttctggactcaatgtgttgagaattatt |
23587626 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaaga |
156 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||| |||| |||| |
|
|
| T |
23587627 |
aatgaacctaccgctgctgctattgcttatggtcttgataaga |
23587669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 54396797 - 54396665
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||||||| || || |||| || | |||||||||||| ||| | || | ||||| || | ||||| |
|
|
| T |
54396797 |
gaatgctgttgttactgttcctgcttatttcaatgattctcaacgtcaagctacgaaagatgctggtgctatttcgggtttgaatgtgttgaggattatt |
54396698 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggt |
146 |
Q |
| |
|
||||| ||||||||||| || ||||| |||||| |
|
|
| T |
54396697 |
aatgagcctactgctgctgcaattgcttatggt |
54396665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 156; Significance: 6e-83; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 21 - 268
Target Start/End: Original strand, 4678359 - 4678606
Alignment:
| Q |
21 |
gttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaac |
120 |
Q |
| |
|
|||||||||||||| || |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||| ||| ||| ||||| |||| |
|
|
| T |
4678359 |
gttgttactgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtcattcaaataatcaacgaac |
4678458 |
T |
|
| Q |
121 |
ctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgt |
220 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4678459 |
ctactgttgcagctattgcatatggttttgacaagagaagtgaaagtgattgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgt |
4678558 |
T |
|
| Q |
221 |
gtctatccttacaattaagggtgatgtttttgaggtaaaagccactgc |
268 |
Q |
| |
|
||||||||||| ||| ||||||| ||| ||||| |||||||||||||| |
|
|
| T |
4678559 |
gtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgc |
4678606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 266
Target Start/End: Original strand, 34466603 - 34466839
Alignment:
| Q |
30 |
gtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctg |
129 |
Q |
| |
|
||||| ||||| || |||||||| ||||||||||| || | ||||||||| | ||||||||||||||||| || | ||| ||||||||||| ||||||| |
|
|
| T |
34466603 |
gtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactattgctggccttaatgttttgcaaataatcaatgaacccactgctg |
34466702 |
T |
|
| Q |
130 |
cagctattgcatatggtattgacaagagaagtgattgtgatggta-aacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatcc |
228 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| | || ||| | || | |||||||| |||||||||||||| ||||| ||||||||||||||| ||| |
|
|
| T |
34466703 |
cagctattgcatatggacttgacaagagagctgactttg-tggaagaaggaaatattttcgtctttgaccttggtggtgggacttttgatgtgtctctcc |
34466801 |
T |
|
| Q |
229 |
ttacaattaagggtgatgtttttgaggtaaaagccact |
266 |
Q |
| |
|
|||||||||||| | |||| ||||| || || |||||| |
|
|
| T |
34466802 |
ttacaattaaggataatgtctttgaagttaaggccact |
34466839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 15595414 - 15595182
Alignment:
| Q |
15 |
aatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatca |
114 |
Q |
| |
|
||||| |||||||| ||||| ||||| |||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||| | || | |||| |
|
|
| T |
15595414 |
aatgcagttgttaccgtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgccattgctggccttaatgttatacgggtaatca |
15595315 |
T |
|
| Q |
115 |
atgaacctactgctg-------cagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtg |
207 |
Q |
| |
|
||||||| || |||| |||||||||||||||| |||||||||| | | | |||| ||| || | ||||||||||||||||| ||||| |||| |
|
|
| T |
15595314 |
atgaaccgacagctgacagctgcagctattgcatatggccttgacaagaggattaactgtgttggagaaagaaatatttttgtctttgatcttggtggtg |
15595215 |
T |
|
| Q |
208 |
gtacttttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
| |||||||||||||||||||| |||||||||| |
|
|
| T |
15595214 |
gcacttttgatgtgtctatcctaacaattaagg |
15595182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 43745221 - 43744997
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| |||||||||||||| ||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| ||| |||| | || ||| |
|
|
| T |
43745221 |
gaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccac--tagatgctggtgccattgctgggcttgatgttatgaagataatc |
43745124 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtactt |
213 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| | || ||||||| | | | || | | | |||||||| |||||||||| || ||||| |||| |
|
|
| T |
43745123 |
aatgaacccactgctgcagctattgcatatggtctggaaaagagaactaactctgtgcgaggaagaaatattttcatctttgacctgggtggtgggactt |
43745024 |
T |
|
| Q |
214 |
ttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
||||||||||| ||||||||||||||| |
|
|
| T |
43745023 |
ttgatgtgtctctccttacaattaagg |
43744997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 12528867 - 12528659
Alignment:
| Q |
25 |
ttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctac |
124 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||| | || || ||||| ||||| || |
|
|
| T |
12528867 |
ttacggtgccagcgtatttcaatgattcgcagcgacgagccaccaaggatgctggtgtcattgctggcctcaatgtaatacggataatcaacgaaccaac |
12528768 |
T |
|
| Q |
125 |
tgctgcagctattgcatatggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtct |
224 |
Q |
| |
|
||| || ||| |||||||||| ||| | |||||| | ||||| || | | | |||||| | ||||||||||||||||| ||||||||||||||| |
|
|
| T |
12528767 |
tgcagctgctcttgcatatggcattcaaaagagagctaattgtcttgaagagagaaggatttttatttttgaccttggcggtggaacttttgatgtgtct |
12528668 |
T |
|
| Q |
225 |
atccttaca |
233 |
Q |
| |
|
| |||||| |
|
|
| T |
12528667 |
cttcttaca |
12528659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 28220325 - 28220099
Alignment:
| Q |
14 |
gaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatc |
113 |
Q |
| |
|
|||||| ||| |||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||| |||||||||| || ||||| | | || || |
|
|
| T |
28220325 |
gaatgcagttattactgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattgctggtctaaatgttctaaggatagtc |
28220226 |
T |
|
| Q |
114 |
aatgaacctactgctgcagctattgcatatggtattgacaagagaagtgattgtgatggta-aacggaatatttttgtctttgaccttggcggtggtact |
212 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| | ||||| |||| | | || |||| | |||| |||||||| |||||||||| || ||||| ||| |
|
|
| T |
28220225 |
aatgaacccactgctgctgctattgcatatggattggacaaaagaactaactg-catgggagaacgaaatattttcatctttgacctgggtggtgggact |
28220127 |
T |
|
| Q |
213 |
tttgatgtgtctatccttacaattaagg |
240 |
Q |
| |
|
|||||||||||| |||||| ||| |||| |
|
|
| T |
28220126 |
tttgatgtgtctctccttagaataaagg |
28220099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 236
Target Start/End: Complemental strand, 28910928 - 28910734
Alignment:
| Q |
42 |
ttcaatgattcgcagcgaaaagccaccatagatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctgcagctattgcat |
141 |
Q |
| |
|
||||||||||| || | |||||||||||||||||||||||||||| | |||||||| | || || |||||||| | ||||||| ||||||| ||| |
|
|
| T |
28910928 |
ttcaatgattcttagaggaaagccaccatagatgctggtgccattgtcaggcttaatgttatgcggataatcaatgagctcactgctgtagctatttcat |
28910829 |
T |
|
| Q |
142 |
atggtattgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatccttacaatt |
236 |
Q |
| |
|
|||| | ||||||||| ||| |||| ||| |||| |||| ||| |||| ||||| || |||| ||||||||||| ||| ||||||||||| |
|
|
| T |
28910828 |
atggcctcgacaagagagctgagtgtgctggagaacgaaatactttcatcttcgacctgggtagtgggacttttgatgtttctctccttacaatt |
28910734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 11200205 - 11200123
Alignment:
| Q |
71 |
agatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctgcagctattgcatatggtattgaca |
153 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||| |||| || || |||||||||||| |||||| |
|
|
| T |
11200205 |
agatgcgggtgctattgctggcctcaatgttttgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
11200123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 11170887 - 11170813
Alignment:
| Q |
71 |
agatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctgcagctattgcatatgg |
145 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||| || ||||| ||||||| |||||||| || || ||||||||||| |
|
|
| T |
11170887 |
agatgcgggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatgg |
11170813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 11209709 - 11209635
Alignment:
| Q |
71 |
agatgctggtgccattgctggccttaatgtctttcgaattatcaatgaacctactgctgcagctattgcatatgg |
145 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||| || ||||| ||||||| |||||||| || || ||||||||||| |
|
|
| T |
11209709 |
agatgcgggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatgg |
11209635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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