View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6131_low_164 (Length: 222)
Name: NF6131_low_164
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6131_low_164 |
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Alignment Details
Target: chr4 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 50342140 - 50342329
Alignment:
| Q |
15 |
cagagaaaaggaagatggatgattcacaaaattgcactattctttatttcattaagatcactattcataaattttgcaacagtagtaattaattgagttg |
114 |
Q |
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| T |
50342140 |
cagagaaaaggaagagggatgattcataaaattgcactattctttatttcattaagatcactattcataaattttgcaacagtagtaattaattgagttg |
50342239 |
T |
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| Q |
115 |
gttagttacagctaactccaacactaactaatacatttaaattactttttaacacttcccttcaattcaaatgtagtctcaatgtgtttg |
204 |
Q |
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| T |
50342240 |
gttagttacagctaactccaacactaactaatacatttaaattactttttaacacttcccttcaattcaaatgtagtctcaatgtgtttg |
50342329 |
T |
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