View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6131_low_27 (Length: 472)

Name: NF6131_low_27
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6131_low_27
NF6131_low_27
[»] chr6 (38 HSPs)
chr6 (49-452)||(1135234-1135637)
chr6 (254-408)||(30388704-30388865)
chr6 (254-449)||(9838178-9838380)
chr6 (262-353)||(8176427-8176522)
chr6 (258-368)||(22784805-22784922)
chr6 (254-359)||(3849048-3849160)
chr6 (254-449)||(1751487-1751689)
chr6 (262-408)||(24663370-24663523)
chr6 (254-368)||(26470860-26470981)
chr6 (256-369)||(22400700-22400820)
chr6 (262-449)||(3621581-3621775)
chr6 (262-449)||(8992539-8992733)
chr6 (262-449)||(9016986-9017180)
chr6 (254-449)||(17193141-17193343)
chr6 (262-408)||(52654-52807)
chr6 (254-368)||(23923850-23923971)
chr6 (292-449)||(30416131-30416295)
chr6 (254-350)||(22050032-22050135)
chr6 (254-314)||(24635691-24635751)
chr6 (262-316)||(19645868-19645922)
chr6 (266-368)||(27313495-27313604)
chr6 (262-340)||(364711-364793)
chr6 (254-340)||(23777279-23777369)
chr6 (254-342)||(17835876-17835968)
chr6 (257-416)||(34730546-34730712)
chr6 (257-340)||(373709-373796)
chr6 (280-449)||(17124041-17124215)
chr6 (254-340)||(31854659-31854749)
chr6 (262-466)||(30236969-30237180)
chr6 (257-449)||(34607084-34607283)
chr6 (257-368)||(31244886-31245004)
chr6 (262-405)||(34378850-34379000)
chr6 (254-352)||(24356207-24356312)
chr6 (286-368)||(11676750-11676838)
chr6 (255-340)||(17251424-17251513)
chr6 (317-449)||(1252215-1252351)
chr6 (254-340)||(19811939-19812029)
chr6 (286-340)||(33260715-33260773)
[»] chr4 (82 HSPs)
chr4 (256-449)||(47596669-47596869)
chr4 (268-449)||(45725536-45725724)
chr4 (254-449)||(3436123-3436325)
chr4 (254-449)||(44069017-44069219)
chr4 (254-416)||(13629282-13629451)
chr4 (266-408)||(39683811-39683960)
chr4 (258-368)||(47251403-47251520)
chr4 (254-449)||(22828457-22828659)
chr4 (254-408)||(29295340-29295501)
chr4 (254-368)||(31862123-31862244)
chr4 (254-452)||(53599839-53600044)
chr4 (254-367)||(12252086-12252206)
chr4 (257-406)||(44217695-44217851)
chr4 (254-449)||(42099694-42099896)
chr4 (254-368)||(19527345-19527466)
chr4 (254-408)||(52677242-52677403)
chr4 (254-368)||(56576240-56576361)
chr4 (254-449)||(19093209-19093411)
chr4 (254-365)||(27492345-27492463)
chr4 (262-407)||(27918596-27918747)
chr4 (262-408)||(16464879-16465032)
chr4 (254-340)||(4201486-4201576)
chr4 (254-340)||(23623663-23623753)
chr4 (254-449)||(37502007-37502210)
chr4 (256-449)||(46871909-46872109)
chr4 (257-449)||(44549632-44549831)
chr4 (262-437)||(53125306-53125488)
chr4 (266-368)||(353964-354073)
chr4 (262-368)||(21044884-21044997)
chr4 (254-368)||(32239386-32239507)
chr4 (262-368)||(36750171-36750284)
chr4 (262-368)||(42513163-42513276)
chr4 (262-362)||(33755225-33755332)
chr4 (269-368)||(6195025-6195131)
chr4 (249-337)||(9834245-9834337)
chr4 (254-449)||(16664227-16664429)
chr4 (265-368)||(26620488-26620598)
chr4 (257-316)||(31984297-31984356)
chr4 (254-408)||(5374447-5374608)
chr4 (286-368)||(8735407-8735496)
chr4 (254-368)||(38617444-38617565)
chr4 (254-368)||(44014050-44014171)
chr4 (254-368)||(47428515-47428636)
chr4 (254-368)||(48782186-48782307)
chr4 (254-368)||(50623400-50623521)
chr4 (256-357)||(23719932-23720040)
chr4 (254-340)||(36408709-36408799)
chr4 (254-340)||(36422875-36422965)
chr4 (254-340)||(37551833-37551923)
chr4 (262-362)||(47751531-47751634)
chr4 (256-340)||(30939143-30939231)
chr4 (256-340)||(41813630-41813718)
chr4 (262-405)||(55935101-55935251)
chr4 (262-408)||(35381512-35381664)
chr4 (254-368)||(42133023-42133144)
chr4 (262-316)||(47885192-47885246)
chr4 (266-368)||(55147198-55147307)
chr4 (254-340)||(33084464-33084554)
chr4 (254-352)||(34361042-34361144)
chr4 (256-408)||(35232395-35232553)
chr4 (256-316)||(47093800-47093860)
chr4 (262-338)||(17698562-17698642)
chr4 (256-340)||(29833094-29833182)
chr4 (277-368)||(36659564-36659662)
chr4 (257-452)||(39671314-39671516)
chr4 (257-315)||(33809076-33809134)
chr4 (257-340)||(37394327-37394414)
chr4 (254-340)||(6150680-6150770)
chr4 (254-367)||(26933909-26934029)
chr4 (254-340)||(34603610-34603700)
chr4 (263-368)||(40411938-40412050)
chr4 (266-368)||(52057588-52057699)
chr4 (395-470)||(23621887-23621962)
chr4 (257-368)||(38542413-38542531)
chr4 (251-449)||(35231673-35231878)
chr4 (265-340)||(41415005-41415083)
chr4 (262-408)||(55702914-55703067)
chr4 (262-307)||(13423783-13423828)
chr4 (254-291)||(18135271-18135308)
chr4 (254-291)||(49122481-49122518)
chr4 (288-368)||(26906526-26906613)
chr4 (267-340)||(52257959-52258036)
[»] chr3 (63 HSPs)
chr3 (254-452)||(54106246-54106451)
chr3 (254-449)||(40139895-40140092)
chr3 (254-452)||(42671948-42672153)
chr3 (256-472)||(45513653-45513876)
chr3 (266-408)||(29651667-29651812)
chr3 (262-449)||(33491200-33491394)
chr3 (254-368)||(790533-790654)
chr3 (254-408)||(32980623-32980784)
chr3 (254-408)||(13167999-13168161)
chr3 (254-362)||(53745429-53745544)
chr3 (254-449)||(47069918-47070120)
chr3 (254-368)||(17102737-17102858)
chr3 (262-408)||(19550237-19550390)
chr3 (266-408)||(28885673-28885822)
chr3 (268-449)||(34266501-34266687)
chr3 (254-408)||(36234350-36234511)
chr3 (262-368)||(43554381-43554494)
chr3 (262-408)||(51244615-51244768)
chr3 (262-408)||(54898188-54898341)
chr3 (256-368)||(20105177-20105296)
chr3 (262-449)||(43775451-43775645)
chr3 (262-368)||(7328446-7328559)
chr3 (262-368)||(39866991-39867103)
chr3 (254-368)||(48151968-48152089)
chr3 (254-368)||(48214050-48214171)
chr3 (256-437)||(50091930-50092118)
chr3 (262-368)||(3376450-3376563)
chr3 (262-368)||(44544311-44544424)
chr3 (262-340)||(27039779-27039861)
chr3 (254-340)||(47104328-47104418)
chr3 (256-337)||(23771272-23771357)
chr3 (256-368)||(27483928-27484047)
chr3 (262-368)||(52627379-52627493)
chr3 (254-340)||(41425612-41425703)
chr3 (254-316)||(41351396-41351458)
chr3 (286-368)||(51219226-51219315)
chr3 (262-340)||(42515345-42515427)
chr3 (262-340)||(54334356-54334437)
chr3 (265-368)||(55141618-55141725)
chr3 (257-449)||(52663428-52663627)
chr3 (256-340)||(2642695-2642783)
chr3 (265-368)||(29697985-29698095)
chr3 (262-340)||(40319100-40319183)
chr3 (254-368)||(46973403-46973527)
chr3 (262-416)||(5244029-5244190)
chr3 (266-312)||(22100029-22100075)
chr3 (254-416)||(32854042-32854210)
chr3 (254-340)||(36371000-36371093)
chr3 (254-340)||(20848892-20848982)
chr3 (293-449)||(45101419-45101582)
chr3 (280-340)||(45145138-45145202)
chr3 (266-341)||(29803630-29803709)
chr3 (262-337)||(33874722-33874801)
chr3 (262-340)||(11473393-11473475)
chr3 (291-408)||(27028117-27028241)
chr3 (266-340)||(30861715-30861793)
chr3 (254-340)||(35077370-35077460)
chr3 (254-340)||(47844011-47844101)
chr3 (254-340)||(51064866-51064956)
chr3 (295-359)||(2154190-2154261)
chr3 (252-312)||(22174045-22174105)
chr3 (251-340)||(28226407-28226500)
chr3 (251-291)||(41926656-41926696)
[»] chr5 (67 HSPs)
chr5 (254-449)||(4175532-4175734)
chr5 (254-449)||(18794748-18794950)
chr5 (267-449)||(26906470-26906657)
chr5 (254-449)||(24074890-24075092)
chr5 (254-449)||(42911515-42911717)
chr5 (254-437)||(7579732-7579922)
chr5 (262-449)||(40198761-40198955)
chr5 (256-449)||(34261279-34261479)
chr5 (257-369)||(38910242-38910361)
chr5 (254-449)||(4985227-4985428)
chr5 (262-449)||(28024311-28024505)
chr5 (254-437)||(28463449-28463639)
chr5 (262-368)||(18465674-18465787)
chr5 (262-368)||(26854227-26854340)
chr5 (254-360)||(28447125-28447238)
chr5 (265-450)||(4017390-4017582)
chr5 (251-452)||(4098293-4098501)
chr5 (254-340)||(10889258-10889348)
chr5 (256-368)||(14793923-14794042)
chr5 (258-449)||(5119147-5119345)
chr5 (254-449)||(6072417-6072619)
chr5 (274-449)||(9076056-9076238)
chr5 (254-449)||(39073009-39073211)
chr5 (254-368)||(12664823-12664944)
chr5 (262-416)||(25343933-25344094)
chr5 (256-449)||(36239424-36239625)
chr5 (262-340)||(6007856-6007938)
chr5 (254-340)||(21606422-21606512)
chr5 (262-340)||(38363164-38363246)
chr5 (254-340)||(42394292-42394382)
chr5 (257-449)||(4427458-4427657)
chr5 (265-461)||(31802765-31802967)
chr5 (257-368)||(1297871-1297989)
chr5 (257-408)||(4688891-4689048)
chr5 (262-449)||(8229855-8230049)
chr5 (256-340)||(21157600-21157688)
chr5 (262-405)||(32440008-32440158)
chr5 (254-449)||(38702106-38702308)
chr5 (254-404)||(425094-425251)
chr5 (266-368)||(6689576-6689685)
chr5 (254-408)||(9127444-9127605)
chr5 (254-316)||(38502992-38503054)
chr5 (279-368)||(18020901-18020997)
chr5 (262-340)||(19831704-19831786)
chr5 (256-368)||(25027857-25027976)
chr5 (254-449)||(4694729-4694931)
chr5 (286-449)||(6754231-6754401)
chr5 (262-449)||(8825030-8825224)
chr5 (256-340)||(21150459-21150547)
chr5 (254-452)||(38017326-38017525)
chr5 (254-446)||(7403819-7404016)
chr5 (254-340)||(9959041-9959131)
chr5 (279-368)||(10359368-10359464)
chr5 (254-336)||(31985218-31985304)
chr5 (254-405)||(5144094-5144252)
chr5 (266-449)||(12869951-12870141)
chr5 (265-316)||(18437515-18437566)
chr5 (254-316)||(1795309-1795371)
chr5 (262-368)||(2134039-2134152)
chr5 (254-340)||(38297780-38297871)
chr5 (317-449)||(7408363-7408498)
chr5 (256-340)||(25785874-25785962)
chr5 (266-340)||(4962350-4962429)
chr5 (254-316)||(12784634-12784696)
chr5 (254-316)||(30368307-30368369)
chr5 (262-340)||(11413694-11413776)
chr5 (262-340)||(18393135-18393217)
[»] chr8 (67 HSPs)
chr8 (254-452)||(14263527-14263732)
chr8 (254-449)||(23429892-23430094)
chr8 (251-408)||(16700989-16701153)
chr8 (346-449)||(41643545-41643648)
chr8 (254-452)||(15596327-15596532)
chr8 (254-449)||(18291447-18291648)
chr8 (254-449)||(38128602-38128797)
chr8 (257-408)||(36058219-36058376)
chr8 (256-452)||(9954634-9954837)
chr8 (254-446)||(34046834-34047033)
chr8 (254-408)||(33935156-33935317)
chr8 (262-340)||(13327770-13327852)
chr8 (256-408)||(23848652-23848811)
chr8 (254-370)||(43553377-43553500)
chr8 (254-449)||(34981812-34982014)
chr8 (254-368)||(167613-167734)
chr8 (254-408)||(16656684-16656844)
chr8 (257-340)||(27518874-27518961)
chr8 (262-340)||(11993884-11993966)
chr8 (254-340)||(39303683-39303773)
chr8 (251-340)||(18842510-18842603)
chr8 (257-449)||(21651801-21652000)
chr8 (261-340)||(7606064-7606147)
chr8 (262-408)||(12763426-12763578)
chr8 (254-340)||(3720663-3720753)
chr8 (256-449)||(10180355-10180555)
chr8 (254-408)||(11707581-11707738)
chr8 (256-316)||(38074261-38074321)
chr8 (262-405)||(2335424-2335574)
chr8 (254-340)||(2888634-2888725)
chr8 (262-405)||(6750606-6750756)
chr8 (262-405)||(6757397-6757547)
chr8 (254-449)||(43553023-43553224)
chr8 (254-352)||(17718486-17718591)
chr8 (262-316)||(35296035-35296089)
chr8 (251-352)||(8453386-8453493)
chr8 (254-340)||(8730994-8731084)
chr8 (254-462)||(35051831-35052044)
chr8 (262-340)||(40521411-40521492)
chr8 (262-340)||(41890513-41890595)
chr8 (265-353)||(12342765-12342860)
chr8 (257-449)||(14061204-14061403)
chr8 (293-449)||(38482847-38483010)
chr8 (254-340)||(8554182-8554273)
chr8 (317-446)||(15623669-15623801)
chr8 (317-446)||(15647457-15647589)
chr8 (254-368)||(25703713-25703834)
chr8 (254-368)||(25812884-25813005)
chr8 (262-340)||(33314534-33314617)
chr8 (254-368)||(35052036-35052157)
chr8 (254-368)||(40603987-40604108)
chr8 (253-340)||(43553618-43553709)
chr8 (262-340)||(7483735-7483817)
chr8 (250-340)||(8672281-8672375)
chr8 (262-340)||(13173920-13174002)
chr8 (257-408)||(26062694-26062851)
chr8 (279-368)||(40228303-40228399)
chr8 (287-340)||(31028670-31028727)
chr8 (292-371)||(35498203-35498289)
chr8 (254-368)||(45281513-45281635)
chr8 (293-340)||(4057310-4057361)
chr8 (265-340)||(8954866-8954945)
chr8 (254-316)||(17074777-17074837)
chr8 (254-316)||(17573433-17573493)
chr8 (435-472)||(2943997-2944034)
chr8 (262-340)||(11163257-11163339)
chr8 (292-449)||(43642044-43642208)
[»] chr2 (51 HSPs)
chr2 (254-408)||(11222415-11222576)
chr2 (266-368)||(36404981-36405090)
chr2 (254-449)||(479031-479234)
chr2 (256-408)||(37093435-37093594)
chr2 (254-408)||(10812182-10812343)
chr2 (254-368)||(25558323-25558443)
chr2 (269-449)||(4883601-4883788)
chr2 (254-449)||(14295815-14296017)
chr2 (254-449)||(26342563-26342765)
chr2 (254-449)||(34399185-34399387)
chr2 (256-368)||(28145711-28145830)
chr2 (254-368)||(11560186-11560307)
chr2 (262-368)||(13753946-13754059)
chr2 (254-368)||(14541314-14541435)
chr2 (262-408)||(15183100-15183253)
chr2 (254-368)||(41885608-41885729)
chr2 (262-340)||(35158521-35158603)
chr2 (254-362)||(34357161-34357276)
chr2 (254-350)||(44360417-44360520)
chr2 (266-449)||(15677349-15677539)
chr2 (254-449)||(15893638-15893840)
chr2 (262-408)||(38072325-38072478)
chr2 (254-368)||(1395547-1395668)
chr2 (254-367)||(4654702-4654822)
chr2 (254-314)||(14288414-14288474)
chr2 (254-408)||(19594334-19594494)
chr2 (265-352)||(9369968-9370062)
chr2 (262-449)||(30264660-30264854)
chr2 (254-369)||(31025078-31025200)
chr2 (271-449)||(3363584-3363769)
chr2 (254-368)||(13965590-13965711)
chr2 (262-337)||(43077283-43077362)
chr2 (262-340)||(2012852-2012934)
chr2 (262-408)||(36375562-36375717)
chr2 (264-416)||(13215386-13215545)
chr2 (251-340)||(37660124-37660217)
chr2 (265-340)||(30544514-30544593)
chr2 (254-352)||(32674194-32674299)
chr2 (286-340)||(25187297-25187355)
chr2 (254-340)||(32854950-32855040)
chr2 (262-340)||(34309220-34309301)
chr2 (279-340)||(18904081-18904146)
chr2 (254-313)||(928232-928291)
chr2 (266-369)||(9706783-9706892)
chr2 (295-449)||(10263780-10263942)
chr2 (269-316)||(28301697-28301744)
chr2 (254-352)||(13849870-13849975)
chr2 (262-352)||(34884693-34884790)
chr2 (292-370)||(37116730-37116815)
chr2 (256-449)||(13000969-13001169)
chr2 (274-307)||(42796203-42796236)
[»] chr7 (55 HSPs)
chr7 (262-449)||(7477256-7477450)
chr7 (262-408)||(22950917-22951070)
chr7 (254-416)||(31430542-31430711)
chr7 (254-452)||(12838133-12838338)
chr7 (254-408)||(17896622-17896783)
chr7 (262-408)||(33173798-33173951)
chr7 (254-449)||(26723907-26724109)
chr7 (254-368)||(3310199-3310320)
chr7 (254-408)||(18470290-18470451)
chr7 (266-449)||(33921832-33922022)
chr7 (262-408)||(20035039-20035192)
chr7 (262-408)||(20045450-20045603)
chr7 (254-408)||(32966148-32966309)
chr7 (262-368)||(36922230-36922343)
chr7 (254-368)||(44480281-44480402)
chr7 (254-371)||(1553498-1553622)
chr7 (265-462)||(41889362-41889566)
chr7 (262-449)||(10227247-10227441)
chr7 (257-368)||(32528467-32528585)
chr7 (265-408)||(36298273-36298423)
chr7 (254-368)||(33099972-33100093)
chr7 (254-368)||(35112412-35112533)
chr7 (262-337)||(36339372-36339451)
chr7 (254-368)||(41675325-41675446)
chr7 (254-370)||(6799106-6799229)
chr7 (254-449)||(7312599-7312802)
chr7 (265-408)||(26632279-26632428)
chr7 (262-449)||(33257872-33258066)
chr7 (262-408)||(29497633-29497786)
chr7 (251-312)||(45324008-45324069)
chr7 (262-352)||(2408817-2408913)
chr7 (266-362)||(42880962-42881065)
chr7 (254-405)||(30866838-30866996)
chr7 (262-316)||(8264938-8264992)
chr7 (254-336)||(8966074-8966160)
chr7 (254-340)||(35746814-35746904)
chr7 (254-311)||(47408121-47408178)
chr7 (317-452)||(22057465-22057609)
chr7 (254-449)||(31398990-31399191)
chr7 (266-368)||(3837857-3837966)
chr7 (298-368)||(36648144-36648221)
chr7 (262-352)||(42842021-42842118)
chr7 (254-340)||(3177913-3178003)
chr7 (254-340)||(28608578-28608668)
chr7 (201-233)||(27739533-27739565)
chr7 (251-340)||(29722474-29722567)
chr7 (256-316)||(46563321-46563381)
chr7 (265-342)||(47459638-47459719)
chr7 (254-312)||(36406733-36406792)
chr7 (256-403)||(46285949-46286103)
chr7 (262-316)||(35207833-35207887)
chr7 (262-316)||(37354057-37354111)
chr7 (262-340)||(41891260-41891343)
chr7 (265-340)||(43874252-43874331)
chr7 (254-298)||(5732271-5732315)
[»] chr1 (66 HSPs)
chr1 (255-449)||(52649781-52649982)
chr1 (254-449)||(50825624-50825826)
chr1 (251-368)||(7782931-7783055)
chr1 (262-449)||(30686402-30686596)
chr1 (254-449)||(35531347-35531549)
chr1 (254-452)||(10675885-10676090)
chr1 (254-368)||(31588872-31588993)
chr1 (254-368)||(49908315-49908436)
chr1 (251-368)||(45226710-45226834)
chr1 (262-361)||(5597814-5597920)
chr1 (254-437)||(9361956-9362146)
chr1 (262-449)||(43500497-43500691)
chr1 (257-408)||(44818440-44818598)
chr1 (254-449)||(45368071-45368273)
chr1 (254-368)||(21927829-21927950)
chr1 (262-368)||(35255477-35255590)
chr1 (254-368)||(44182743-44182864)
chr1 (257-449)||(37609353-37609552)
chr1 (262-358)||(40926886-40926989)
chr1 (262-449)||(13699165-13699359)
chr1 (251-362)||(19093248-19093366)
chr1 (254-449)||(19929518-19929720)
chr1 (254-449)||(28679004-28679206)
chr1 (266-408)||(35483874-35484021)
chr1 (256-371)||(36318338-36318460)
chr1 (262-368)||(13507761-13507874)
chr1 (262-368)||(13514949-13515062)
chr1 (262-408)||(18033919-18034072)
chr1 (254-337)||(31570804-31570891)
chr1 (254-368)||(51613394-51613515)
chr1 (254-340)||(8464613-8464703)
chr1 (254-446)||(52749000-52749197)
chr1 (256-368)||(32347963-32348082)
chr1 (254-368)||(1429267-1429388)
chr1 (254-352)||(32168461-32168566)
chr1 (339-449)||(42787338-42787448)
chr1 (266-369)||(36850640-36850748)
chr1 (251-340)||(9127647-9127740)
chr1 (256-368)||(38648442-38648561)
chr1 (256-370)||(17013407-17013528)
chr1 (254-316)||(37296917-37296979)
chr1 (254-310)||(1677199-1677255)
chr1 (257-405)||(15660573-15660728)
chr1 (254-449)||(19349431-19349633)
chr1 (262-449)||(19455451-19455644)
chr1 (257-368)||(37437186-37437304)
chr1 (254-449)||(51974223-51974425)
chr1 (262-316)||(51972473-51972527)
chr1 (262-340)||(1038074-1038156)
chr1 (262-340)||(1044980-1045062)
chr1 (254-340)||(13566659-13566749)
chr1 (256-449)||(43952773-43952973)
chr1 (254-314)||(18344309-18344369)
chr1 (262-437)||(38597581-38597764)
chr1 (256-336)||(1428204-1428288)
chr1 (262-368)||(8008302-8008413)
chr1 (266-361)||(35605453-35605555)
chr1 (257-337)||(37735306-37735390)
chr1 (254-368)||(10506796-10506917)
chr1 (262-368)||(30702423-30702536)
chr1 (254-316)||(48508116-48508178)
chr1 (439-472)||(1039397-1039430)
chr1 (439-472)||(1046303-1046336)
chr1 (295-362)||(46096573-46096644)
chr1 (336-408)||(2059905-2059977)
chr1 (262-314)||(40680635-40680687)
[»] scaffold0040 (1 HSPs)
scaffold0040 (254-408)||(69083-69244)
[»] scaffold2146 (1 HSPs)
scaffold2146 (280-449)||(567-737)
[»] scaffold0002 (1 HSPs)
scaffold0002 (254-408)||(138827-138989)
[»] scaffold0014 (1 HSPs)
scaffold0014 (254-361)||(195882-195996)
[»] scaffold0024 (1 HSPs)
scaffold0024 (262-368)||(49138-49251)
[»] scaffold0831 (1 HSPs)
scaffold0831 (266-370)||(2802-2913)
[»] scaffold0280 (1 HSPs)
scaffold0280 (269-449)||(8152-8339)
[»] scaffold0172 (1 HSPs)
scaffold0172 (251-368)||(26264-26388)
[»] scaffold0274 (1 HSPs)
scaffold0274 (257-416)||(328-494)
[»] scaffold0192 (1 HSPs)
scaffold0192 (254-449)||(14777-14979)
[»] scaffold0019 (1 HSPs)
scaffold0019 (266-368)||(72084-72193)
[»] scaffold0009 (1 HSPs)
scaffold0009 (254-352)||(147281-147386)
[»] scaffold0886 (1 HSPs)
scaffold0886 (262-338)||(4507-4587)
[»] scaffold0018 (1 HSPs)
scaffold0018 (254-313)||(184326-184385)
[»] scaffold0007 (1 HSPs)
scaffold0007 (295-449)||(77112-77273)
[»] scaffold0036 (1 HSPs)
scaffold0036 (265-340)||(23130-23209)
[»] scaffold0003 (1 HSPs)
scaffold0003 (254-316)||(252577-252639)
[»] scaffold0325 (1 HSPs)
scaffold0325 (254-340)||(298-388)
[»] scaffold0006 (1 HSPs)
scaffold0006 (262-340)||(96229-96311)
[»] scaffold0343 (1 HSPs)
scaffold0343 (264-352)||(7417-7512)
[»] scaffold0001 (1 HSPs)
scaffold0001 (337-449)||(419548-419660)


Alignment Details
Target: chr6 (Bit Score: 296; Significance: 1e-166; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 49 - 452
Target Start/End: Complemental strand, 1135637 - 1135234
Alignment:
Q  49 tacaccaaggaggttgaattatgttggctttttatcaaacnnnnnnnaagtgtttaaactgttcaaagtctgaattagagtgtgttatgttcagagactg 148  Q
    ||||| ||| ||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1135637 tacacgaagcaggttgaattatgttggctttttgtcaaactttttttaagtgtttaaactgttcaaagtctgaattagagtgtgctatgttcagagactg 1135538  T
Q  149 aattcagagtttggttgtgcagcagattaaacacaaacacgcgtgcacgcgtgcaggggcggagtcaggttttaaacattgggggtacaaagtcttaata 248  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||    
T  1135537 aattcagagtttggttgtgcagtagattaaacacaaaaacgcgtgcacgcgtgcacggt-ggagccaggttttaaacattgggggtacaaagtcttaata 1135439  T
Q  249 ggtattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcactaagttcaatgcaatattaaatgttttatcaat 348  Q
    |||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  1135438 ggtacttcctcctttcctttttaagtgtctcttttatagaaaatttttgtttctatttaactatcactgagttcaatgcaatattaaatgttttatcaat 1135339  T
Q  349 attattcttagttaattat-tacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaag 447  Q
    ||||||||||||||||||| || |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1135338 attattcttagttaattatatagatagagaaaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaag 1135239  T
Q  448 taata 452  Q
    |||||    
T  1135238 taata 1135234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 30388704 - 30388865
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| ||| ||||||||||||    |||||||||| || ||||||   ||||||| ||    
T  30388704 tccctccgttcctttttaagtgtcacttttgaagaaaatttttgttcctaattaactgtcactttcaaagttcaatgaaacattaaatgttgttttacca 30388803  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| ||||| |  || | ||||||  ||||| |||||||||||||||||    
T  30388804 atattatgcttagttatttattgcggagagagaaatatatgaaataagatattaaatgaata 30388865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 9838380 - 9838178
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| | ||||||||||||||    |||||||||||||  |||||   ||||||||||    
T  9838380 tccctccgttcctttttaagtgtcacttttggagaaattttttgttccaatttaactgtcactttcaaagttcaatgcaactttaaatgttgttttatca 9838281  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||  |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| || |||| | | ||||| || | ||||| ||||||||    
T  9838280 atattacccttagttatttattgcggagagggaaatatatgaaatgagatattaaatgaataaggctattatagtaaaagtatcaattattgtatcaaaa 9838181  T
Q  447 gta 449  Q
    |||    
T  9838180 gta 9838178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 8176427 - 8176522
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgttttatcaatattat 353  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||||||  ||||||||||||| |||||||||    
T  8176427 ttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttttaccaatattat 8176522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 22784922 - 22784805
Alignment:
Q  258 tcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatat 350  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||    
T  22784922 tcctttcctttttaagtgtctcttttgaagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatat 22784823  T
Q  351 tattcttagttaattatt 368  Q
    ||| |||| ||| |||||    
T  22784822 tatccttacttatttatt 22784805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 3849048 - 3849160
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  3849048 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 3849147  T
Q  347 atattattcttag 359  Q
    |||||||||||||    
T  3849148 atattattcttag 3849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 1751689 - 1751487
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| |||||||||| |||||    ||||||||||||| ||||||   ||||||| ||    
T  1751689 tccctccgttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactttcactttcgaagttcaatgcaacattaaatgttgttttacca 1751590  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||| ||| ||||| || ||   ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  1751589 atattgtccttaattatttattgcagagaaagaaatatatgaaaagagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 1751490  T
Q  447 gta 449  Q
    |||    
T  1751489 gta 1751487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 24663370 - 24663523
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||| || |||||| ||||||||||| || ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||| ||    
T  24663370 ttcctttttaagtatcacttttggagaaaatttttattcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtt 24663469  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  24663470 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 24663523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 26470981 - 26470860
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||    ||||||||||||| ||||||   ||||||  ||    
T  26470981 tccctccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttgcca 26470882  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  26470881 atattatccttagttatttatt 26470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 369
Target Start/End: Complemental strand, 22400820 - 22400700
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  22400820 cctccgttcctttttaagtgtctcttttggagaaattttttgttcttatttaactgtcacttttgaagttcaatgcaacattaaatattgttttaccaat 22400721  T
Q  349 attattcttagttaattatta 369  Q
    ||||| |||| ||| ||||||    
T  22400720 attatccttacttatttatta 22400700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 3621581 - 3621775
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||||  ||| ||||||||||||| |||||    ||||||||||||| ||||||   |||| || |||||||||     
T  3621581 ttcctttttaagtgtcacttttgaagaaaaaatttatttctatttaactatcactttcaaagttcaatgcaacattaaatattgttctaccaatattatc 3621680  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| ||||| || || | ||||||  |||||  ||||||||||||||||  || ||| | | ||||| |||| |||||  ||||||||||    
T  3621681 cttagttatttattgcagagagagaaatatatgaaatgagatattaaatgaataatgtcattatagtaaaagtataacttattgcatcaaaagta 3621775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 8992539 - 8992733
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||||||||| |||||    ||||||||||||| ||||||   |||||||  ||||||||     
T  8992539 ttcctttttaagtgtctcttttgaagaaattttttgttcatatttaactatcactttcaaagttcaatgcaacattaaatgttgttttactaatattatc 8992638  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| |||||||  || |  |||||  |||||  |||| ||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  8992639 cttagttatttattacggagagataaatatatgaaatgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 8992733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 9016986 - 9017180
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||||||||| |||||    ||||||||||||| ||||||   |||||||  ||||||||     
T  9016986 ttcctttttaagtgtctcttttgaagaaattttttgttcatatttaactatcactttcaaagttcaatgcaacattaaatgttgttttactaatattatc 9017085  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| |||||||  || |  |||||  |||||  |||| ||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  9017086 cttagttatttattacggagagataaatatatgaaatgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 9017180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 17193141 - 17193343
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| |||||||| |||||||    ||||||||||||| ||||||   ||||||| ||    
T  17193141 tccctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaaatgtcactttcaaagttcaatgcaacattaaatgttgttttacca 17193240  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || | || |||  |||||  |||||||||||||||| ||| ||| | | ||||  |||| |||||  |||||||    
T  17193241 atattgtccttagttatttattgcggagagagatatatatgaaatgagatattaaatgaataaggtcattatagtaaaataataacttattgcatcaaaa 17193340  T
Q  447 gta 449  Q
    |||    
T  17193341 gta 17193343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 52654 - 52807
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatcaatattatt 354  Q
    ||||||||||||||| ||||||| |||   |||||||||||||||||||||||||    ||||||||||||| |||||   |||||||||||||||||      
T  52654 ttcctttttaagtgtttcttttggagattttttttgtttctatttaactgtcacttttaaagttcaatgcaacattaaattatgttttatcaatattacc 52753  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| ||| |||||    || | ||||||  ||||| |||||||||||||||||    
T  52754 cttaattatttattgtggagagagaaatatatgaaataagatattaaatgaata 52807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 23923971 - 23923850
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||| | |||||||| ||||||||||||||||    ||||||||| |||  |||||   ||||||||||    
T  23923971 tccctccgttcctttttaagtgtcacttttggagagattttttgttcctatttaactgtcactttcaaagttcaatacaacgttaaatgctgttttatca 23923872  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  23923871 atattatccttagttatttatt 23923850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 449
Target Start/End: Complemental strand, 30416295 - 30416131
Alignment:
Q  292 tttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattattcttagttaattattacatagggcgaaataa 384  Q
    ||||||||||||||||||||| |||    ||||||||||||| ||||||||   ||||||||||||||  |||||||| ||||  |  || | ||||||     
T  30416295 tttttgtttctatttaactgttactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttagttatttatggcggagagagaaatat 30416196  T
Q  385 ttgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
     |||||||  |||||||||||||| ||||||| | | ||||| |||| ||||| |||||||||||    
T  30416195 atgaaacagaatattaaatgaataaggttattatagtaaaagtataacttattgtatcaaaagta 30416131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 22050032 - 22050135
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatca 346  Q
    ||||||| |||||||||||  |||||||||| ||||  |||||||||||||||||||||||||    ||||||||||||| |||||   |||||||||||    
T  22050032 tccctccgttcctttttaatcgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatca 22050131  T
Q  347 atat 350  Q
    ||||    
T  22050132 atat 22050135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 24635691 - 24635751
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca 314  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  24635691 tccctccgttcctttttaagtgtcccttttggagaaattttttgtttctatttaactgtca 24635751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 19645922 - 19645868
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  19645922 ttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcact 19645868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 368
Target Start/End: Original strand, 27313495 - 27313604
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatcaatattattctta 358  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| |||||||    ||||||| ||||| |||||||||   |||| ||||||||| ||||    
T  27313495 tttttaagtgtctcttttggagaaattttttgttcctatttaaatgtcactttcaaagttcattgcaacattaaatgttgatttaccaatattatcctta 27313594  T
Q  359 gttaattatt 368  Q
    |||| |||||    
T  27313595 gttatttatt 27313604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 364793 - 364711
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||    | || |||||||||| ||||||||||    
T  364793 ttcctttttaagtgtcacttttggagaaaatttttgttactatttaactgtcattttcaaaattcaatgcaacattaaatgtt 364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 23777279 - 23777369
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||  ||||| ||||| |||||||| |||||||||| |||||    ||||||||||||| ||||||||||    
T  23777279 tccctccgttcctttttaagtgtcaattttggagaaattttttgttcctatttaactatcactttcgaagttcaatgcaacattaaatgtt 23777369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 17835876 - 17835968
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtttt 342  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| |||||||||||| |||    || || ||||||| ||||||||||||    
T  17835876 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgttactttcaaattttaatgcaacattaaatgtttt 17835968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 416
Target Start/End: Original strand, 34730546 - 34730712
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||| ||||||| | |||  ||||||||| ||||||||||||||    |||||||| | || ||||||   |||||||||||||    
T  34730546 ctccgttcctttttaagtgtttcttttgaacaaatattttgtttcaatttaactgtcacttttaaagttcaacgtaacattaaatggtgttttatcaata 34730645  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    |||| |||| ||| ||||| || || |  |||||  |||||  ||||||| |||||||| |||||||    
T  34730646 ttatccttacttatttattgcaaagagataaatatatgaaattagatattgaatgaataaggttatt 34730712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 373709 - 373796
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||| ||| |||||||||||| |||||| ||||| ||||||||  |||||||||||||||    |||||||||||||| |||||||||    
T  373709 ctccgttcatttttaagtgtcacttttggagaaattttttgttcatatttaactgtcactttcaaagttcaatgcaattttaaatgtt 373796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 449
Target Start/End: Complemental strand, 17124215 - 17124041
Alignment:
Q  280 ttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattattacat 372  Q
    ||||| |||||| |||||||| |||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| |||||||| ||||| |      
T  17124215 ttttggagaaaagttttgtttttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttatttattgc-- 17124118  T
Q  373 agggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
     | | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  17124117 ggagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 17124041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 31854749 - 31854659
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||||||||  |||||| |||||| |||||||| ||||||| |||||||    ||||||||||||| | ||||||||    
T  31854749 tccctccgttcctttttaagtgttacttttggagaaaaattttgtttttatttaattgtcactttcaaagttcaatgcaacaataaatgtt 31854659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 466
Target Start/End: Original strand, 30236969 - 30237180
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||| |||  |||||| ||||||  |||||||| ||||||||||||||    || |||||||||| ||||||   ||||||| ||||||||      
T  30236969 ttcctttttaaatgttacttttggagaaaaaatttgtttcaatttaactgtcactttcaaaattcaatgcaacattaaacgttgttttaccaatattacc 30237068  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagtaatact 454  Q
    |||||||| |||||    |  | ||||||  | |||  ||||||||||| |||| ||||||| | | ||||| || |  |||| ||||||||||| ||||    
T  30237069 cttagttatttattgttgaaagagaaatatataaaatgagatattaaattaataaggttattatagtaaaagtatgaagtattgtatcaaaagtagtact 30237168  T
Q  455 ccctccgtccct 466  Q
    ||||||||||||    
T  30237169 ccctccgtccct 30237180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 449
Target Start/End: Original strand, 34607084 - 34607283
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||| ||||||| | |||  ||||||| | ||||||||||||||    |||||||||| |||||||||   ||||||| |||||    
T  34607084 ctccgttcctttttaagtgtttcttttgaacaaatattttgttccaatttaactgtcacttttaaagttcaatgtaatattaaatggtgttttaccaata 34607183  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| |||| ||| ||||| || || | || |||  |||||  |||||||||| ||||| | ||||| | | ||||| |||  || || |||||||||||    
T  34607184 ttatccttacttatttattgcagagagagacatatatgaaattagatattaaacgaataagattattatagtaaaagtatacattgttgtatcaaaagta 34607283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 31245004 - 31244886
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatcaata 349  Q
    |||| ||| ||||||| ||||  ||||  ||||| ||||||||| |||||||||||||||    ||||||||||||| ||||| |   ||||||||||||    
T  31245004 ctccgttcatttttaattgtcatttttagagaaattttttgtttgtatttaactgtcactttcaaagttcaatgcaacattaattcttgttttatcaata 31244905  T
Q  350 ttattcttagttaattatt 368  Q
    |||||||||| || |||||    
T  31244904 ttattcttagatatttatt 31244886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 405
Target Start/End: Original strand, 34378850 - 34379000
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||  ||||| | ||||  |||||||||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| ||||      
T  34378850 ttcctttttaagtgtcatttttggaaaaaaaatttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacc 34378949  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    |||||||| ||||||   || | ||||||  ||||| ||||||||||||||    
T  34378950 cttagttatttattatggagagtgaaatatatgaaataagatattaaatga 34379000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 24356312 - 24356207
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||||  ||||| || ||||| ||||||||||||||||    ||||||||||||  ||||||   ||||||||||    
T  24356312 tccctccgttcctttttaattgtcacttttagagaaatttattgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttgttttatca 24356213  T
Q  347 atatta 352  Q
    ||||||    
T  24356212 atatta 24356207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 11676838 - 11676750
Alignment:
Q  286 agaaaatttttgtttctatttaactgtcact---aagttcaatgcaatattaaatg---ttttatcaatattattcttagttaattatt 368  Q
    ||||| |||||||| ||||||||||||||||   ||||||||||||| ||||||||   ||||| |||||||| |||||| || |||||    
T  11676838 agaaattttttgttcctatttaactgtcacttcaaagttcaatgcaacattaaatgttattttaccaatattactcttagatatttatt 11676750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 340
Target Start/End: Complemental strand, 17251513 - 17251424
Alignment:
Q  255 ccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||| ||| ||||||| | || |||||| ||||| |||||||| ||||||||| ||||||    ||||||||||||| ||||||||||    
T  17251513 ccctccgttcttttttaattatcacttttgaagaaattttttgttcctatttaaccgtcactttcaaagttcaatgcaacattaaatgtt 17251424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 449
Target Start/End: Original strand, 1252215 - 1252351
Alignment:
Q  317 aagttcaatgcaatattaaat---gttttatcaatattattcttagttaatt-attacatagggcgaaataattgaaacaagatattaaatgaatatggt 412  Q
    ||||||||||||| |||||||   |||||| ||||||||| |||||||  || |||||  || | ||||||  ||||| ||||||||||||||||| |||    
T  1252215 aagttcaatgcaacattaaatattgttttaccaatattatccttagttgttttattacggagagagaaatatatgaaataagatattaaatgaataaggt 1252314  T
Q  413 tatttttggaaaaggataatttattatatcaaaagta 449  Q
     ||| | | ||||  ||| ||||||| ||||||||||    
T  1252315 cattatagtaaaaatatagtttattacatcaaaagta 1252351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 19811939 - 19812029
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| |||| | |||| | ||  |||||||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  19811939 tccctccgttcctttttaattgtcacgtttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 19812029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 33260715 - 33260773
Alignment:
Q  286 agaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  33260715 agaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 33260773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 256 - 449
Target Start/End: Complemental strand, 47596869 - 47596669
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatatt---aaatgttttatcaat 348  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||    | |||||||||||||||||    | ||||||||||||    
T  47596869 cctccgtttctttttaagtgtctcttttgtagaaaatttttgtttctatttaattgtcattttcaaagttcaatgcaatattgagtattgttttatcaat 47596770  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    |||| ||||| ||| |||||||  ||   |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  47596769 attactcttaattatttattacggagacagaaataattgaaacaatatattaaatgaataaggttattattggaaaaggataatttattgtatcaaaagt 47596670  T
Q  449 a 449  Q
    |    
T  47596669 a 47596669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 268 - 449
Target Start/End: Original strand, 45725536 - 45725724
Alignment:
Q  268 tttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttagt 360  Q
    ||||||||||||||||||| ||||   |||||||||||||| ||||| |    ||||||||||||||||||||| ||   ||||||||||||| |||| |    
T  45725536 tttaagtgtctcttttgtaaaaaaaaattgtttctatttaattgtcatttttaaagttcaatgcaatattaaatattattttatcaatattatccttaat 45725635  T
Q  361 taattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    || |||||||| || | ||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||| |||||||||||    
T  45725636 tatttattacagagagagaaataattgaaacaagatattaaatgaatgaggttattattggaaaatgataatttattgtatcaaaagta 45725724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 3436325 - 3436123
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  3436325 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 3436226  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| |||||||  || | ||||||  |||||  | ||||||||| |||| ||||||| | | ||||| ||| ||||||  |||||||    
T  3436225 atattatccttagttatttattacggagagagaaatatatgaaatgaaatattaaattaataaggttattatagtaaaagtatagtttattgcatcaaaa 3436126  T
Q  447 gta 449  Q
    |||    
T  3436125 gta 3436123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 44069017 - 44069219
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||    ||||||||||||| ||||||   ||||||||||    
T  44069017 tccctccgttcctttttaagtgtcacttttgtagaaaaattttgttcctatttaagtgtcactttcaaagttcaatgcaacattaaatgttgttttatca 44069116  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| |||||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  44069117 atattgttcttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 44069216  T
Q  447 gta 449  Q
    |||    
T  44069217 gta 44069219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 416
Target Start/End: Complemental strand, 13629451 - 13629282
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  13629451 tccctccgttcctttttaagtgtcacttttgtagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 13629352  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| |||||||    
T  13629351 atattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggttatt 13629282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 408
Target Start/End: Complemental strand, 39683960 - 39683811
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||||||||||| | ||||    
T  39683960 tttttaagtgtcatttttgtagaaaaattttgtttctatttaactgtcacttttaaagttcaatgcaacattaaatattgttttatcaatattgtcctta 39683861  T
Q  359 gttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| |||||||| || | ||||||  |||||  ||||||||||||||||    
T  39683860 gttatttattacagagagagaaatatatgaaatgagatattaaatgaata 39683811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 47251403 - 47251520
Alignment:
Q  258 tcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatat 350  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||    ||||||||||||||||||||   ||||||||||||||    
T  47251403 tcctttcctttttaactgtctcttttgaagaaattttttgtttctattcaactgtcactttcaaagttcaatgcaatattaaatgttgttttatcaatat 47251502  T
Q  351 tattcttagttaattatt 368  Q
    ||||||||| || |||||    
T  47251503 tattcttagctatttatt 47251520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 22828659 - 22828457
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatatta---aatgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    ||||||||||||| ||||    |||||||||||    
T  22828659 tccctccgttcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattacatgatgttttatca 22828560  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||  |||| ||| ||||| || |  | ||||||  ||||| || |||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  22828559 atattacccttaattatttattgcagatagagaaatatatgaaataatatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 22828460  T
Q  447 gta 449  Q
    |||    
T  22828459 gta 22828457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 29295340 - 29295501
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||| |||||||||||| |||    ||||||||||||| ||||||   ||||||| ||    
T  29295340 tccctcctttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtgactttcaaagttcaatgcaacattaaatgttgttttacca 29295439  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  29295440 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 29295501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 31862244 - 31862123
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  31862244 tccctccgttcctttttaagtgtctcttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 31862145  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||| ||| |||||    
T  31862144 atattatccttatttatttatt 31862123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 452
Target Start/End: Complemental strand, 53600044 - 53599839
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  ||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  53600044 tccctccgttcctttttaagtgtcatttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgttttacca 53599945  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||   ||||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  53599944 atattatccttagttatttattgcggagagagaaatatatgaaatgtgatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 53599845  T
Q  447 gtaata 452  Q
    ||||||    
T  53599844 gtaata 53599839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 12252086 - 12252206
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  12252086 tccctccgttcctttttaagtgtcacttttgaagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 12252185  T
Q  347 atattattcttagttaattat 367  Q
    ||||||| |||||||| ||||    
T  12252186 atattatccttagttatttat 12252206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 406
Target Start/End: Original strand, 44217695 - 44217851
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||    
T  44217695 ctccgttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcgaagttcaatgcaacattaaatgttgttttaccaata 44217794  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaa 406  Q
    |||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||    
T  44217795 ttatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaa 44217851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 42099694 - 42099896
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||| |||||    ||||||||||||| ||||||   ||||||||||    
T  42099694 tccctccgttcctttttaagtgtctcttttggagaatttttttgtttctatttaactatcactttcaaagttcaatgcaacattaaatggtgttttatca 42099793  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||  |||| ||| ||||| |  |  | ||||||  ||||| ||||||||||||||||| ||| |||   | ||||| |||| |||||  |||||||    
T  42099794 atattacccttaattatttattgcggaaagagaaatatatgaaataagatattaaatgaataaggtcattacagtaaaagtataacttattgcatcaaaa 42099893  T
Q  447 gta 449  Q
    |||    
T  42099894 gta 42099896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 19527466 - 19527345
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  19527466 tccctccgtttctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 19527367  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  19527366 atattatccttagttatttatt 19527345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 52677403 - 52677242
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||  ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  52677403 tccctccgttcctttttaagtgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 52677304  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  52677303 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 52677242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 56576361 - 56576240
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  56576361 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgttttacca 56576262  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  56576261 atattatccttagttatttatt 56576240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 19093411 - 19093209
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || |||||||||||||||||||  ||||| |||||||||||||||||| ||||||    ||||||||||||| ||||||   ||||||| ||    
T  19093411 tccctccgtttctttttaagtgtctcttttaaagaaattttttgtttctatttaaccgtcactttcaaagttcaatgcaacattaaatgttgttttacca 19093312  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | | ||||  |||||  |||||||||||||||| ||| ||| | | ||||| | || |||||  |||||||    
T  19093311 atattatccttagttatttattgcggagagaggaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaa 19093212  T
Q  447 gta 449  Q
    |||    
T  19093211 gta 19093209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 365
Target Start/End: Original strand, 27492345 - 27492463
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  27492345 tccctccgtttctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 27492444  T
Q  347 atattattcttagttaatt 365  Q
    ||||||| |||||| ||||    
T  27492445 atattatgcttagtcaatt 27492463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 407
Target Start/End: Original strand, 27918596 - 27918747
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt--tttatcaatattattc 355  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||    |||||||||  ||||||||||||  |||||||||||||       
T  27918596 ttcctttttaagtatctcttttgtagaaatgttttgtttctatttagctgtcactttcaaagttcaatcaaatattaaatgttgtttatcaatattacca 27918695  T
Q  356 ttagttaattattacatagggcgaaataattgaaacaagatattaaatgaat 407  Q
    |||||||  |||| || || | ||||||  ||||||||||||| ||||||||    
T  27918696 ttagttatatattgcaaagagagaaatatatgaaacaagatataaaatgaat 27918747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 16465032 - 16464879
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||| |     
T  16465032 ttcctttttaagtgtcacttttgaagaaattttttgttactatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtc 16464933  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||| | || || | ||||||  |||||  ||||||||||||||||    
T  16464932 cttagttatttagtgcagagagagaaatatatgaaatgagatattaaatgaata 16464879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 4201576 - 4201486
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||| ||| ||||||||||    
T  4201576 tccctccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaattcaacattaaatgtt 4201486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 23623753 - 23623663
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||||||||| |||||  |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  23623753 tccctccgttcctttttaagtgtcactttttgagaaaatttttgttactatttaactgtcactttcaaagttcaatgcaacattaaatgtt 23623663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 37502007 - 37502210
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaa---tgttttatc 345  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||| ||||||     | | ||||||||| ||||||   |||||||||    
T  37502007 tccctccgttcctttttaagtgtcacttttggagaaattttttgtttctatttaaccgtcactttcaaagggtcaatgcaacattaaatgttgttttatc 37502106  T
Q  346 aatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaa 445  Q
    |||||||  |||||||| ||||||   || |  |||||  |||||    |||||||||||||| ||||||| | | ||||| |||| ||||| |||||||    
T  37502107 aatattacccttagttatttattatggagagataaatatatgaaatgtaatattaaatgaataaggttattatagtaaaagtataaattattgtatcaaa 37502206  T
Q  446 agta 449  Q
    ||||    
T  37502207 agta 37502210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 449
Target Start/End: Original strand, 46871909 - 46872109
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| | ||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  46871909 cctccgttcctttttaagtgtcacttttggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaat 46872008  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    ||| | |||||||| ||||| |  || | ||||||  |||||  | |||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||||    
T  46872009 attgtccttagttatttattgcggagagagaaatatatgaaatgaaatattaaatgaataaggtcattatagtaaaagaataacttattgcatcaaaagt 46872108  T
Q  449 a 449  Q
    |    
T  46872109 a 46872109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 449
Target Start/End: Original strand, 44549632 - 44549831
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||| ||| ||||| ||||| ||||||||  |||||||||||| ||    ||||| ||||||| ||||||   |||||||||||||    
T  44549632 ctccattcctttttaagtatcttttttggagaaattttttgttattatttaactgtcgctttcaaagtttaatgcaacattaaatgctgttttatcaata 44549731  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||||||||||||| ||||| |  || | ||||||  |||||  |||| ||||||||||| ||| ||| |   ||||| |||| ||||| |||||||||||    
T  44549732 ttattcttagttatttattgcgaagagagaaatatatgaaatgagatgttaaatgaataaggtcattataataaaagtataacttattgtatcaaaagta 44549831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 437
Target Start/End: Complemental strand, 53125488 - 53125306
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||| |||||    ||||||||||||| |||||   |||||||||||||||||      
T  53125488 ttcctttttaagtgtctcttttggagaatttttttgtttctatttaactttcactttcaaagttcaatgcaacattaaatgatgttttatcaatattacc 53125389  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttatt 437  Q
    |||| ||| ||||| |  ||   |||||   ||||| ||||||||||||||||| ||| ||| | | ||||| |||| |||||    
T  53125388 cttaattatttattgcggagaaagaaatgtatgaaataagatattaaatgaataaggtcattatagtaaaagtataacttatt 53125306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 368
Target Start/End: Original strand, 353964 - 354073
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattattctta 358  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| |||||||    ||||||||||||| ||||||||   ||||| ||||||||| ||||    
T  353964 tttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttattttaccaatattatcctta 354063  T
Q  359 gttaattatt 368  Q
    |||| |||||    
T  354064 gttatttatt 354073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 21044997 - 21044884
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||  |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  21044997 ttcctttttaagtgtcactttttgagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 21044898  T
Q  355 cttagttaattatt 368  Q
     ||||||| |||||    
T  21044897 tttagttatttatt 21044884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 32239386 - 32239507
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||||| |||||| |||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  32239386 tccctccgttcctttttaaatgtcacttttggagaaaaattttgttcatatttaactgtcacttttaaagttcaatgcaacattaaatattgttttacca 32239485  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  32239486 atattatccttagttatttatt 32239507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 36750171 - 36750284
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||| ||||||||||   ||||||| |||||||| |    
T  36750171 ttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactgtcactttcgaagttcaatacaatattaaatgttgttttaccaatattaat 36750270  T
Q  355 cttagttaattatt 368  Q
    |||| ||| |||||    
T  36750271 cttacttatttatt 36750284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 42513276 - 42513163
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| |||||| ||||||| |||||||| |||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  42513276 ttcctttttaagtgtcacttttggagaaaaattttgttactatttaagtgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 42513177  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  42513176 cttagttatttatt 42513163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 33755332 - 33755225
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||  ||||||||||| ||||| |||||||||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  33755332 ttcctttttaagtgtcacttttagagaaaatttttatttctctttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 33755233  T
Q  355 cttagtta 362  Q
    ||||||||    
T  33755232 cttagtta 33755225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 368
Target Start/End: Original strand, 6195025 - 6195131
Alignment:
Q  269 ttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagtt 361  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||     ||||||||||||| ||||||   ||||||| ||||||||| |||||||    
T  6195025 ttaagtgtctcttttggagaaattttttgttcctatttaactgtcacattcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagtt 6195124  T
Q  362 aattatt 368  Q
    | |||||    
T  6195125 atttatt 6195131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 337
Target Start/End: Original strand, 9834245 - 9834337
Alignment:
Q  249 ggtattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat 337  Q
    |||| ||||||  |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| |||||||    
T  9834245 ggtactccctcagttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcacttttaaagttcaatgcaacattaaat 9834337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 16664227 - 16664429
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||  ||||||  ||||||||| ||||||    ||||||||||||| ||||||   ||||||| ||    
T  16664227 tccctccgttcctttttaagtgtcacttttggagaaatattttgtccctatttaacggtcactttcaaagttcaatgcaacattaaatgttgttttacca 16664326  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
     |||| | |||||||| ||||| |  || | ||||||  ||||| ||||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  16664327 gtattgtccttagttatttattgcggagagagaaatatatgaaataagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 16664426  T
Q  447 gta 449  Q
    |||    
T  16664427 gta 16664429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 26620598 - 26620488
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctt 357  Q
    ||||||||||||| | |||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| |||    
T  26620598 ctttttaagtgtcacatttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatcctt 26620499  T
Q  358 agttaattatt 368  Q
    ||||| |||||    
T  26620498 agttatttatt 26620488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 31984356 - 31984297
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  31984356 ctccgttcctttttaagtgtctcttttggagaaattttttgttcctatttaactgtcact 31984297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 5374608 - 5374447
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| ||||| ||||||||  | |||||||||||||    ||| ||||||||| ||||||   ||||||| ||    
T  5374608 tccctccgtttctttttaagtgtcacttttggagaaattttttgttcttgtttaactgtcactttcaaagctcaatgcaacattaaatgttgttttacca 5374509  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  5374508 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 5374447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 8735407 - 8735496
Alignment:
Q  286 agaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatcaatattattcttagttaattatt 368  Q
    |||||| |||||||||||||||| |||||||    |||||||||||||||||||||   |||||| |||||||||||||||||| |||||    
T  8735407 agaaaaattttgtttctatttaattgtcactttcaaagttcaatgcaatattaaatattgttttaccaatattattcttagttatttatt 8735496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 38617565 - 38617444
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||  ||||||| ||||||||||||||    | ||||||||||||| ||||||   ||||||| ||    
T  38617565 tccctccgttcctttttaagtgtcacttttggagaaatattttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttacca 38617466  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  38617465 atattgtccttagttatttatt 38617444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 44014171 - 44014050
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||| |||||  ||||| ||||||  |||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  44014171 tccctccgttcctttttatgtgtcatttttggagaaaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 44014072  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  44014071 atattatccttagttatttatt 44014050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 47428515 - 47428636
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||| |||||||| |||||| |||||| ||||||| ||||||||||||| ||    ||||||||||||| ||||||   ||||||| ||    
T  47428515 tccctccattcctttataagtgtcacttttggagaaaaattttgttcctatttaactgtcgctttcaaagttcaatgcaacattaaatgttgttttacca 47428614  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  47428615 atattgtccttagttatttatt 47428636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 48782186 - 48782307
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| | ||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  48782186 tccctccgtttctttttaagtgtcacttttggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 48782285  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  48782286 atattgtccttagttatttatt 48782307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 50623400 - 50623521
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||| | ||||||  ||||||||||||||| |||||||    ||||||||||||| ||||||   ||||||| ||    
T  50623400 tccctccgttcctttttaagtgtcactttaggagaaaaaatttgtttctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttacca 50623499  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||| ||| |||||    
T  50623500 atattatccttaattatttatt 50623521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 23720040 - 23719932
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||  ||||| |||||||| || |||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  23720040 cctccgttcctttttaagtgtcacttttagagaaattttttgttcctgtttaactgtcactttcgaagttcaatgcaacattaaatgttgttttaccaat 23719941  T
Q  349 attattctt 357  Q
    |||||||||    
T  23719940 attattctt 23719932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 36408709 - 36408799
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| |||||||| ||| |    | ||||||||||||| ||||||||||    
T  36408709 tccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaattgtaattttcaaagttcaatgcaacattaaatgtt 36408799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 36422875 - 36422965
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| |||||||| ||| |    | ||||||||||||| ||||||||||    
T  36422875 tccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaattgtaattttcaaagttcaatgcaacattaaatgtt 36422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 37551923 - 37551833
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| |||| |||||||||||| |||||||||||| |||| |||||||    ||||||||| ||| ||||||||||    
T  37551923 tccctccgttcctttttaattgtcacttttgtagaaattttttgtttctaattaagtgtcactttcaaagttcaatacaacattaaatgtt 37551833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 47751531 - 47751634
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca---ctaagttcaatgcaatattaaatgttttatcaatattattctta 358  Q
    |||||||||||||||| |||||| ||||| |||||||| | ||||||||||||    |||| |||||||||  ||||||||||||||||| |||  ||||    
T  47751531 ttcctttttaagtgtcacttttggagaaattttttgttccaatttaactgtcatttttaaggtcaatgcaactttaaatgttttatcaatgttaccctta 47751630  T
Q  359 gtta 362  Q
    ||||    
T  47751631 gtta 47751634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 30939143 - 30939231
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| || |||||||| |||| |||||  ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||||||    
T  30939143 cctccgtttctttttaattgtcacttttagagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 30939231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 41813630 - 41813718
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||||||||| |||  |||||| | |||||||||||||||| |||| |||||||    ||||||||||||||||||||||||    
T  41813630 cctccgttcctttttaattgttacttttgcataaaatttttgtttctaattaagtgtcactttcaaagttcaatgcaatattaaatgtt 41813718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 405
Target Start/End: Original strand, 55935101 - 55935251
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||   ||||| ||||| |||||||||||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| ||||      
T  55935101 ttcctttttaagtgttatttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacc 55935200  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    |||||||| ||||||   || | ||||||  ||||| ||||||||||||||    
T  55935201 cttagttatttattatggagagagaaatacatgaaataagatattaaatga 55935251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 35381664 - 35381512
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||| |||||||||||| |||   ||||||||||||||||| |||||||    ||||||||||||| ||||||   |||||||  ||||||||     
T  35381664 ttcctttttatgtgtctcttttgaagatt-tttttgtttctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttactaatattatc 35381566  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  35381565 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 35381512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 42133023 - 42133144
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatca 346  Q
    ||||||| |||||||||||  ||| |||||  ||||| |||||||| ||||||||||||| ||    ||||||||||||| |||||||   |||||||||    
T  42133023 tccctccgttcctttttaatcgtcacttttagagaaattttttgttcctatttaactgtcgctttcaaagttcaatgcaacattaaatgtagttttatca 42133122  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| ||||| || |||||    
T  42133123 atattatccttagatatttatt 42133144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 47885246 - 47885192
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    |||||||||||||||||||| || ||||  |||||||||||||||||||||||||    
T  47885246 ttcctttttaagtgtctcttatggagaatttttttgtttctatttaactgtcact 47885192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 368
Target Start/End: Complemental strand, 55147307 - 55147198
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||| ||||| ||||| |||||||||  ||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| ||||    
T  55147307 tttttaagtgtcttttttggagaaattttttgttttcatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatcctta 55147208  T
Q  359 gttaattatt 368  Q
     ||| |||||    
T  55147207 cttatttatt 55147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 33084464 - 33084554
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| || |||||||||||||||||||| ||||| ||||||||  ||||||||||| |||    ||||||||| ||| ||||||||||    
T  33084464 tccctccgtttctttttaagtgtctcttttgaagaaactttttgttcttatttaactgttactttcaaagttcaatacaacattaaatgtt 33084554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 34361042 - 34361144
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgttttatcaata 349  Q
    ||||||| || |||||||| |||| |||||  ||||| |||||||| ||||||||||||||||    || |||||||||| ||||||||||||| | |||    
T  34361042 tccctccgtttctttttaattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaaattcaatgcaacattaaatgttttaccgata 34361141  T
Q  350 tta 352  Q
    |||    
T  34361142 tta 34361144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 408
Target Start/End: Complemental strand, 35232553 - 35232395
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||||||||||||||||  ||||| |||||||||| ||| |||||||||| ||||     ||||||||||||| ||||||   ||||||| ||||    
T  35232553 cctccgttcctttttaagtgtca-ttttggagaaaattttggttcctatttaactatcacgttcaaagttcaatgcaacattaaatgttgttttaccaat 35232455  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||| |||| ||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  35232454 attatccttacttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 35232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 47093800 - 47093860
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||| ||||||    
T  47093800 cctccattcctttttaagtgtcacttttgaagaaattttttgttcctatttaaccgtcact 47093860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 17698562 - 17698642
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg 338  Q
    ||||||||| ||||||  ||||| ||||| ||||||||||||||||| |||||||    ||||||||||||| ||||||||    
T  17698562 ttccttttttagtgtcgtttttgaagaaattttttgtttctatttaattgtcacttttaaagttcaatgcaacattaaatg 17698642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 340
Target Start/End: Complemental strand, 29833182 - 29833094
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||| ||||||||||||||||||| ||||| || ||||| |||||||||||| |||    ||||||||||||| | ||||||||    
T  29833182 cctccgttcatttttaagtgtctcttttggagaaatttcttgttcctatttaactgttacttttaaagttcaatgcaacaataaatgtt 29833094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 368
Target Start/End: Complemental strand, 36659662 - 36659564
Alignment:
Q  277 ctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaattatt 368  Q
    |||||||  ||||| |||||||| |||||||||||| |||    ||||||||||||| ||||||||||   |||| ||||||||||||||||| |||||    
T  36659662 ctcttttagagaaattttttgttcctatttaactgttactttcaaagttcaatgcaacattaaatgttgatttattaatattattcttagttatttatt 36659564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 452
Target Start/End: Original strand, 39671314 - 39671516
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatcaata 349  Q
    |||| ||||||  ||| |||| |||||| ||||| ||||||||  |||||||||||||||    ||||||||||||| |||||||   |||||| |||||    
T  39671314 ctccgttccttcataattgtcacttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgtagttttaccaata 39671413  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    || | |||| ||| ||||| || ||   ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  39671414 ttgtccttaattatttattgcagagaaagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagta 39671513  T
Q  450 ata 452  Q
    |||    
T  39671514 ata 39671516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 33809076 - 33809134
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcac 315  Q
    |||| ||||||||||| |||| |||||| ||||||||||||||  ||||||||||||||    
T  33809076 ctccgttcctttttaattgtcacttttggagaaaatttttgttcttatttaactgtcac 33809134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 37394414 - 37394327
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||| ||||||| ||| ||||  ||||| ||||| |||||||||||||||||||||||||    ||||||||||||| | ||||||||    
T  37394414 ctccgttcctttctaaatgtcatttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 37394327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 6150680 - 6150770
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| |||| |||||| | ||  |||||||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  6150680 tccctccattcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 6150770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 26934029 - 26933909
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||| ||   ||||| ||||| |||||||||| |||||||||||| |    |||||||||||||  |||||   ||||||||||    
T  26934029 tccctccgttcctttttaagcgttatttttggagaaattttttgtttcaatttaactgtcatttttaaagttcaatgcaactttaaatgttgttttatca 26933930  T
Q  347 atattattcttagttaattat 367  Q
    ||||||  |||||||| ||||    
T  26933929 atattacccttagttatttat 26933909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 34603610 - 34603700
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||| ||| |||| |||||  ||||| |||||||||||| ||||||||||||    |||||||||| || ||||||||||    
T  34603610 tccctccgttcctttataactgtcacttttacagaaattttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgtt 34603700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 40411938 - 40412050
Alignment:
Q  263 tcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattattc 355  Q
    |||||||||||||||||||||| | ||||   ||||| ||||||||||||||    | |||||||||| || ||||||   ||||||||||||||||| |    
T  40411938 tcctttttaagtgtctcttttggaaaaaaaaattgttcctatttaactgtcattttcaaagttcaatgtaacattaaatattgttttatcaatattatcc 40412037  T
Q  356 ttagttaattatt 368  Q
    ||| ||| |||||    
T  40412038 ttaattatttatt 40412050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 368
Target Start/End: Complemental strand, 52057699 - 52057588
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttct--atttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattct 356  Q
    |||||||||||| |||||| ||||  ||||| ||| |  ||||||||||||||    ||||||||||||| ||||||||||   ||||||||||||| ||    
T  52057699 tttttaagtgtcacttttgaagaatttttttttttttcaatttaactgtcactttcaaagttcaatgcaaaattaaatgttattttatcaatattatcct 52057600  T
Q  357 tagttaattatt 368  Q
    |||||| |||||    
T  52057599 tagttatttatt 52057588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 23621962 - 23621887
Alignment:
Q  395 atattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagtaatactccctccgtccctaatt 470  Q
    |||||||||||||| ||| ||| | | ||||| ||| ||||||  |||||||||| ||||||||||||||| ||||    
T  23621962 atattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagtagtactccctccgtcccaaatt 23621887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 38542531 - 38542413
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| |||||||||||  |||| ||||| |||||| ||||||| |||||||| |||||||    || |||| ||||| ||||||   ||||||| |||||    
T  38542531 ctccgttcctttttaatcgtcttttttggagaaaaattttgttcctatttaaatgtcactttcaaaattcagtgcaacattaaatattgttttaccaata 38542432  T
Q  350 ttattcttagttaattatt 368  Q
    |||| |||||||| |||||    
T  38542431 ttatccttagttatttatt 38542413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 449
Target Start/End: Original strand, 35231673 - 35231878
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgtttta 343  Q
    ||||| |||| ||| ||||||||| ||  ||||| |||||| |||| ||| |||||||| ||||||    ||||||||||||| ||||||   |||||||    
T  35231673 tattctctccgttcttttttaagtatcatttttggagaaaaattttatttttatttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttta 35231772  T
Q  344 tcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatca 443  Q
     ||||||| | |||| ||| ||||| |  || | ||||||  ||||| || ||||||||||||||  || ||| | | ||||| ||| ||||||  ||||    
T  35231773 ccaatattgtccttaattatttattgcggagagagaaatatatgaaataaaatattaaatgaataaagtcattatagtaaaagtatagtttattgcatca 35231872  T
Q  444 aaagta 449  Q
    ||||||    
T  35231873 aaagta 35231878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 41415005 - 41415083
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||  ||||| ||||| ||||||||||||||||| |||||||    ||||||||||||| | ||||||||    
T  41415005 ctttttaagtgtcatttttgaagaaa-tttttgtttctatttaattgtcactttcaaagttcaatgcaacaataaatgtt 41415083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 55702914 - 55703067
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattatt 354  Q
    ||||||||||||  ||||||||| |||   ||||||||| ||||||||| |||||    ||||||||||||| ||||||||    ||||| |||||||      
T  55702914 ttcctttttaagcatctcttttgaagattttttttgtttttatttaactatcactttcaaagttcaatgcaacattaaatgataatttattaatattacc 55703013  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| ||| ||||| || || | ||||||  ||||| |||||| ||||||||||    
T  55703014 cttaattatttattgcagagagagaaatatatgaaataagataataaatgaata 55703067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 13423828 - 13423783
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctattta 307  Q
    ||||||||||  |||| |||||||||||||| ||||||||||||||    
T  13423828 ttcctttttacttgtcacttttgtagaaaatatttgtttctattta 13423783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 18135308 - 18135271
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaa 291  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  18135308 tccctccgttcctttttaagtgtctcttttgtaaaaaa 18135271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 49122518 - 49122481
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaa 291  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  49122518 tccctccgttcctttttaagtgtctcttttgtaaaaaa 49122481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 26906613 - 26906526
Alignment:
Q  288 aaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattatt 368  Q
    |||| |||||||| |||||||||||||||    | ||||||||||| ||||||   |||||||  ||||||||||||||||| |||||    
T  26906613 aaaaattttgtttttatttaactgtcactttcaaggttcaatgcaacattaaatattgttttactaatattattcttagttatttatt 26906526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 52258036 - 52257959
Alignment:
Q  267 ttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||  ||||  ||||| ||||| |||||||||||||||||||    ||||||||||||| | ||||||||    
T  52258036 ttttaagtgtcattttttgagaaattttttatttctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 52257959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 452
Target Start/End: Original strand, 54106246 - 54106451
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  54106246 tccctccattcctttttaagtgtcacttttgaagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 54106345  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| ||||| | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| ||| ||||||  |||||||    
T  54106346 atattatccttagttatttattgcatagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaa 54106445  T
Q  447 gtaata 452  Q
    ||||||    
T  54106446 gtaata 54106451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 40140092 - 40139895
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcactaagttcaatgcaatattaaatg---ttttatcaatat 350  Q
    |||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||   |||||||||| ||||||||   ||||||||||||    
T  40140092 tccctcctatcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcact-ttttcaatgcaacattaaatgatattttatcaatat 40139994  T
Q  351 tattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||  |||| ||| ||||| |  || | ||||||  ||||| ||||||||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  40139993 tacccttaattatttattgcggagagagaaatatatgaaataagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 40139895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 452
Target Start/End: Complemental strand, 42672153 - 42671948
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatca 346  Q
    ||||||| |||||||||||| |||  ||||| |||||||||||||| ||||| ||||||||||    |||||||||| |||||||||||||   ||| ||    
T  42672153 tccctccattcctttttaagcgtcatttttggagaaaatttttgttcctattcaactgtcacttttaaagttcaatgtaatattaaatgttgttttacca 42672054  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| || |  | ||||||  ||||| ||||||||||||||||| ||||||| | | ||||| ||| ||||||  |||||||    
T  42672053 atattgtccttagttatttattgcagaaagagaaatatatgaaataagatattaaatgaataaggttattatagtaaaagtatagtttattgcatcaaaa 42671954  T
Q  447 gtaata 452  Q
    ||||||    
T  42671953 gtaata 42671948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 472
Target Start/End: Complemental strand, 45513876 - 45513653
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||| |||||||||||  |||||| ||||| |||||||| ||||||||||||||||    ||||||||| ||| ||||||   ||||||||||||    
T  45513876 cctccgttcttttttaagtgttacttttggagaaattttttgttcctatttaactgtcacttttaaagttcaatacaacattaaatgttgttttatcaat 45513777  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    ||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||  ||| ||||||  |||||||||    
T  45513776 attgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaaatatagtttattgcatcaaaagt 45513677  T
Q  449 aatactccctccgtccctaattat 472  Q
    | |||| |||||||||||||||||    
T  45513676 agtactacctccgtccctaattat 45513653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 408
Target Start/End: Original strand, 29651667 - 29651812
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcactaagttcaatgcaatattaaatg---ttttatcaatattattcttagtta 362  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||  | ||||||||||||| ||||||||   ||||||||||||||| ||||||||    
T  29651667 tttttaagtgtcacttttggagaaaatttttgtttttatttaactgtttcaaagttcaatgcaacattaaatgttattttatcaatattatccttagtta 29651766  T
Q  363 attattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
     ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  29651767 tttattgcggagagagaaatatatgaaatgagatattaaatgaata 29651812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 449
Target Start/End: Complemental strand, 33491394 - 33491200
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||    ||||||||||||| ||||||   ||||||| |||||||||     
T  33491394 ttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgttactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 33491295  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| ||| |||||||  || | ||||||  |||||  ||||||||||| |||| ||||||| | | ||||| |||| |||||  ||||||||||    
T  33491294 cttaattatttattacggagagtgaaatatatgaaatgagatattaaataaataaggttattatagtaaaagtataacttattgcatcaaaagta 33491200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 790533 - 790654
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  790533 tccctccgttcctttttaagtgtcacttttggagaaaatttatgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 790632  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  790633 atattgtccttagttatttatt 790654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 32980623 - 32980784
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatatta---aatgttttatca 346  Q
    ||||||| ||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||    || |||||| ||| ||||   ||||||||||||    
T  32980623 tccctccgttcttttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaaattcaatacaacattaaataatgttttatca 32980722  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||  |||||||| |||||  | || | ||||||  ||||| |||||||||||||||||    
T  32980723 atattacccttagttatttattgtagagagagaaatatatgaaataagatattaaatgaata 32980784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 13167999 - 13168161
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaatgtt---ttatc 345  Q
    ||||||| |||||||||||||||| |||||  |||||||| |||||  ||||||||||||| |     ||||||||||||| ||||||||||   ||| |    
T  13167999 tccctccgttcctttttaagtgtcacttttagagaaaattattgttcttatttaactgtcatttttcaaagttcaatgcaacattaaatgttgttttacc 13168098  T
Q  346 aatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| |||||||| |||||||| || | ||||||  |||||  ||||||||||||||||    
T  13168099 aatattatccttagttatttattacagagagagaaatatatgaaatgagatattaaatgaata 13168161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 362
Target Start/End: Complemental strand, 53745544 - 53745429
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  53745544 tccctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 53745445  T
Q  347 atattattcttagtta 362  Q
    ||||||| ||||||||    
T  53745444 atattatccttagtta 53745429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 47070120 - 47069918
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||| ||||||| |||||||| ||||||||| ||||||    ||||||||||||| ||||||   ||||||| ||    
T  47070120 tccctccattcctttttaagtgtcactttcgtagaaattttttgttcctatttaaccgtcactttcaaagttcaatgcaacattaaatgttgttttacca 47070021  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||   ||||| | | ||||| |||| |||||  |||||||    
T  47070020 atattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaaattattatagtaaaagtataacttattgcatcaaaa 47069921  T
Q  447 gta 449  Q
    |||    
T  47069920 gta 47069918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 17102737 - 17102858
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||| ||| ||||||   ||||||| ||    
T  17102737 tccctccgttcttttttaagtgtctcttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgttttacca 17102836  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  17102837 atattatccttagttatttatt 17102858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 19550237 - 19550390
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||| |||  |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||||||||||| ||    
T  19550237 ttcctttttaaatgttacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaaaattaaatgttgttttatcaatattgtt 19550336  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  19550337 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 19550390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 408
Target Start/End: Original strand, 28885673 - 28885822
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||| ||||||    ||||||||||||| ||||||   ||||||| ||||||||| ||||    
T  28885673 tttttaagtgtctcttttgaagaaattttttgttcctatttaaccgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatattatcctta 28885772  T
Q  359 gttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  28885773 gttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 28885822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 449
Target Start/End: Complemental strand, 34266687 - 34266501
Alignment:
Q  268 tttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattattcttagt 360  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||    | ||||||||||||| ||||||   ||||||||||||||| | ||||||    
T  34266687 tttaagtgtcacttttggagaaaatttttgtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttatcaatattgtccttagt 34266588  T
Q  361 taattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    || ||||| |   | | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  34266587 tatttattgc--tgcgagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 34266501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 36234350 - 36234511
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||| |||||||| ||| || |||||||||||||||||||||||||||||||    |||||||||||||  |||||   ||||||| ||    
T  36234350 tccctccgttcctttgtaagtgtcacttatgaagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacgttaaatgttgttttacca 36234449  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| || || |  || | ||||||  ||||| | |||||||||||||||    
T  36234450 atattatccttagttattttttgcggagagagaaatatatgaaataggatattaaatgaata 36234511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 43554381 - 43554494
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||| |     
T  43554381 ttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtc 43554480  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  43554481 cttagttatttatt 43554494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 51244615 - 51244768
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||| |||| |||||| |||||| |||||||  |||||||||||||||    ||||||||||||||||||||   ||||||| |||||||||     
T  51244615 ttcctttttaaatgtcacttttgaagaaaaattttgttcttatttaactgtcactttcaaagttcaatgcaatattaaatgttgttttaccaatattatc 51244714  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  51244715 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 51244768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 54898341 - 54898188
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| |||||| ||||||| |||||||||| |||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  54898341 ttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactatcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 54898242  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  54898241 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 54898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 368
Target Start/End: Original strand, 20105177 - 20105296
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| || |||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  20105177 cctccgttcctttttaagtgtcacttttggagaaaatttttgttcctctttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaat 20105276  T
Q  349 attattcttagttaattatt 368  Q
    ||| | |||||||| |||||    
T  20105277 attgtccttagttatttatt 20105296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 449
Target Start/End: Complemental strand, 43775645 - 43775451
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||| ||||||||||| ||||| |||||||||  ||||||||||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  43775645 ttcctttttaactgtctcttttgaagaaattttttgttttcatttaactgtcactttcaaagttcaatgcaacattaaatattgttttaccaatattatc 43775546  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||||| || ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| | || |||||  ||||||||||    
T  43775545 cttagctatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagta 43775451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 7328446 - 7328559
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||    ||||||||||||| ||||||   |||||||  ||||||||     
T  7328446 ttcctttttaagtgtctcttttggagaaattttttgttcctatttaactatcactttcaaagttcaatgcaacattaaatgttgttttactaatattatc 7328545  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  7328546 cttagttatttatt 7328559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 39867103 - 39866991
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatcaatattatt 354  Q
    ||||||||||||||||||||||| || || ||||| || ||||||||||||||||    ||||||||||||| |||||||||   |||| ||||||||||    
T  39867103 ttcctttttaagtgtctcttttggag-aatttttttttcctatttaactgtcacttttaaagttcaatgcaacattaaatgttgatttaccaatattatt 39867005  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  39867004 cttagttatttatt 39866991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 48151968 - 48152089
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||||  |||||||| ||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  48151968 tccctccgttcctttttaagtgtcacttttggagaaaaaatttgtttcaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 48152067  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||  |||||||| |||||    
T  48152068 atattacccttagttatttatt 48152089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 48214050 - 48214171
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||||  |||||||| ||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  48214050 tccctccgttcctttttaagtgtcacttttggagaaaaaatttgtttcaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 48214149  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||  |||||||| |||||    
T  48214150 atattacccttagttatttatt 48214171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 437
Target Start/End: Original strand, 50091930 - 50092118
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||   ||||| ||||| |||||||| ||| ||||||||||||    ||||||||||||| | ||||   ||||||| ||||    
T  50091930 cctccgttcctttttaagtgttatttttggagaaactttttgttcctacttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaat 50092029  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttatt 437  Q
    ||| | |||||||| |||||||  || | ||||||  ||||| |||||||||||||| || ||||||| | | ||||| |||| |||||    
T  50092030 attttccttagttatttattacggagagagaaatatatgaaataagatattaaatgactaaggttattatagtaaaagtataaattatt 50092118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 3376563 - 3376450
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatg---ttttatcaatattatt 354  Q
    ||||||||||||||||||||||  ||| ||| |||||||||||||||||||||    | |||| |||||||| ||||||||   ||||| |||||||||     
T  3376563 ttcctttttaagtgtctcttttaaagataatatttgtttctatttaactgtcagtttcaaagtccaatgcaacattaaatgttattttaccaatattatc 3376464  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  3376463 cttagttatttatt 3376450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 44544424 - 44544311
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattatt 354  Q
    ||||||||||||||||||||||| | ||||   ||||||||||||||||||||||    || |||||||||| ||||||||   ||||| |||||||||     
T  44544424 ttcctttttaagtgtctcttttgaaaaaaaaaattgtttctatttaactgtcactttcaaaattcaatgcaacattaaatgttattttaccaatattatc 44544325  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  44544324 cttagttatttatt 44544311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 27039861 - 27039779
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||| | |||||||||||||| ||||||||||||||||    ||||||||||||| | ||||||||    
T  27039861 ttcctttttaagtgtcactttaggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 27039779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 47104418 - 47104328
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| |||| |||||  ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  47104418 tccctccgttcctttttaattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 47104328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 23771272 - 23771357
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat 337  Q
    ||||| ||||||||||| |||| |||||| | |||||||||||||||| ||||||||||||    ||||||||||||| |||||||    
T  23771272 cctccgttcctttttaattgtcacttttgcataaaatttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaat 23771357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 27484047 - 27483928
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||  |||||  ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  27484047 cctccgttcctttttaagtgttactttttaagaaagtttttgttcctatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaat 27483948  T
Q  349 attattcttagttaattatt 368  Q
    ||| | |||||||| |||||    
T  27483947 attgtccttagttatttatt 27483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 52627493 - 52627379
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaa---tgttttatcaatattat 353  Q
    |||||||||||||||| |||||| ||||  ||||||||||||||||| |||||||     ||||||||||||| ||||||   ||||||| ||||||| |    
T  52627493 ttcctttttaagtgtcacttttggagaagttttttgtttctatttaattgtcacttttaaaagttcaatgcaacattaaatgttgttttaccaatattgt 52627394  T
Q  354 tcttagttaattatt 368  Q
     |||||||| |||||    
T  52627393 ccttagttatttatt 52627379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 41425612 - 41425703
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||      |||||||||||| ||||||||||    
T  41425612 tccctccgttcctttttaagtgtctcttttggagaatttttttgttcctatttaagtgtcactttacatagttcaatgcaacattaaatgtt 41425703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 41351458 - 41351396
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| ||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||    
T  41351458 tccctccgttcttttttaagtgtcacttttggagaaattttttgttcctatttaactgtcact 41351396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 51219315 - 51219226
Alignment:
Q  286 agaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattatt 368  Q
    |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| |||||||| |||||    
T  51219315 agaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgttttaccaatattatccttagttatttatt 51219226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 42515427 - 42515345
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||| |||| |||||  ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||||||    
T  42515427 ttcctctttaattgtcactttttgagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 42515345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 54334437 - 54334356
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||    ||||||||||||| | ||||||||    
T  54334437 ttcctttttaagtgtca-ttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 54334356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 55141725 - 55141618
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaact-gtcactaagttcaatgcaatattaaa---tgttttatcaatattattcttagt 360  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||||  |  | ||||||||||||| ||||||   ||||||| ||||||||  ||||||    
T  55141725 ctttttaagtgtcacttttggagaaaatttttgtttcaatttaactcctttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagt 55141626  T
Q  361 taattatt 368  Q
    || |||||    
T  55141625 tatttatt 55141618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 449
Target Start/End: Original strand, 52663428 - 52663627
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||| ||||||||||||  ||||| ||||| |||||||| |||||||| |||||    | |||||||| |||||||||||   ||||||| |||||    
T  52663428 ctccgttcatttttaagtgtcagttttggagaaattttttgttactatttaattgtcattttcaaagttcaaagcaatattaaacgttgttttaccaata 52663527  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    || | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  52663528 ttgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagcaaaagtatagcttattgcatcaaaagta 52663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 2642695 - 2642783
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||||||||| |||| | |||| | ||| |||||||||||| ||||||||||||    ||||||||||||| ||||||||||    
T  2642695 cctccgttcctttttaattgtcacatttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgtt 2642783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 368
Target Start/End: Original strand, 29697985 - 29698095
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctt 357  Q
    |||||||||||||  ||||  ||||| |||||||| |||||||| ||||| |    ||||||||||||||||||||   ||||||||||||||| | |||    
T  29697985 ctttttaagtgtcattttttgagaaagtttttgttcctatttaattgtcattttcaaagttcaatgcaatattaaatgttgttttatcaatattgtcctt 29698084  T
Q  358 agttaattatt 368  Q
    ||||| |||||    
T  29698085 agttatttatt 29698095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 40319183 - 40319100
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||      |||||||||||| ||||||||||    
T  40319183 ttcctttttaagtgtctcttttggagaatttttttgttcctatttaagtgtcactttacatagttcaatgcaacattaaatgtt 40319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 46973403 - 46973527
Alignment:
Q  254 tccctcctttcctttttaagtgtct---cttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---tttta 343  Q
    ||||||| |||||||||||||||||   |||||| |||||| |||||||  |||||||||||||||    ||||||||| ||| || |||||   |||||    
T  46973403 tccctccgttcctttttaagtgtcttcacttttggagaaaaattttgttcttatttaactgtcactttcaaagttcaatacaacatcaaatgttatttta 46973502  T
Q  344 tcaatattattcttagttaattatt 368  Q
     ||||||||| |||||||| |||||    
T  46973503 ccaatattatccttagttatttatt 46973527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 416
Target Start/End: Complemental strand, 5244190 - 5244029
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||| ||||| |||| | | |||||||||||| |||||||||| |||||    ||||||||||||| | ||||   ||||||| ||| ||||      
T  5244190 ttcctttttacgtgtcactttcggataaaatttttgttcctatttaactatcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacc 5244091  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    |||||||| ||||| || || | ||||||  || || |||||||||||||| || |||||||    
T  5244090 cttagttatttattgcagagagagaaatatatggaataagatattaaatgactaaggttatt 5244029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 22100075 - 22100029
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgt 312  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  22100075 tttttaagtatctcttttggagaaaatttttgtttttatttaactgt 22100029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 416
Target Start/End: Complemental strand, 32854210 - 32854042
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||| || || |||||| ||||| |||||||| ||||||||||||||||    |||||||||| || | ||||   ||||||||||    
T  32854210 tccctccattcctttttaggt-tcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgtaacaataaatgttgttttatca 32854112  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    | ||||  |||||||| ||||| |  || | ||||||  ||||| || ||||||||||| || |||||||    
T  32854111 acattacccttagttatttattgcggagagagaaatatatgaaataaaatattaaatgactaaggttatt 32854042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 36371093 - 36371000
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaa--aatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||||||||| ||||    |||||||| |||||||| |||||||      |||||||||||||||||||||||    
T  36371093 tccctccgttcctttttaagtgtctcttttggagaatttttttttgttcctatttaagtgtcactttacatagttcaatgcaatattaaatgtt 36371000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 20848982 - 20848892
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||| ||| |||| |||||  ||||||  |||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  20848982 tccctccgttcctttataattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 20848892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 449
Target Start/End: Complemental strand, 45101582 - 45101419
Alignment:
Q  293 ttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattattacatagggcgaaataat 385  Q
    ||||||| ||||||||||||||||    |||||| ||| || ||||||   ||||||| ||||||||| |||||||| ||||| |  || | ||||||      
T  45101582 ttttgttcctatttaactgtcactttgaaagttccatgaaacattaaatgttgttttaccaatattatccttagttatttattgcggagagagaaatata 45101483  T
Q  386 tgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||  |||||||||||||||| ||| ||| | ||||||| |||  |||||  ||||||||||    
T  45101482 tgaaatgagatattaaatgaataaggtcattataggaaaagtatagcttattgcatcaaaagta 45101419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 45145138 - 45145202
Alignment:
Q  280 ttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||||||||| ||  |||||||||||||||    ||||||||||||||||||||||||    
T  45145138 ttttggagaaaatttttattcttatttaactgtcactttcaaagttcaatgcaatattaaatgtt 45145202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 29803630 - 29803709
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgttt 341  Q
    |||||||||||| |||||| ||||||  ||||||  ||||||| |||||||    ||||||||||||| |||||||||||    
T  29803630 tttttaagtgtcacttttggagaaaaaatttgttcatatttaattgtcactttcaaagttcaatgcaacattaaatgttt 29803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 33874801 - 33874722
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat 337  Q
    ||||||||||  |||| |||||  ||||| |||||||| ||||||||||||||||    ||||||||||||| |||||||    
T  33874801 ttcctttttatctgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaat 33874722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 11473393 - 11473475
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||| ||||| |||||||| || ||||||| |||||    ||||||||||||| | ||||||||    
T  11473393 ttcctttttaaatgtcacttttggagaaattttttgttcctgtttaactttcactttcaaagttcaatgcaacaataaatgtt 11473475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 408
Target Start/End: Complemental strand, 27028241 - 27028117
Alignment:
Q  291 atttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattattacatagggcgaaata 383  Q
    ||||||||||||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| ||||  ||| |||| ||||| |  || | ||||||    
T  27028241 atttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatattgttttaccaacattacccttggttatttattgcggagagagaaata 27028142  T
Q  384 attgaaacaagatattaaatgaata 408  Q
      ||||| |||||||||||||||||    
T  27028141 tatgaaataagatattaaatgaata 27028117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 340
Target Start/End: Complemental strand, 30861793 - 30861715
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatgtt 340  Q
    |||||||||||| |||||| ||||| ||||| || ||||||||||||||    | ||||||||||||| | ||||||||    
T  30861793 tttttaagtgtcacttttggagaaattttttattcctatttaactgtcattatcaaagttcaatgcaacaataaatgtt 30861715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 35077370 - 35077460
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||| ||| |||| |||||  ||||  |||||||||||| ||||||||||||    |||||||||| || ||||||||||    
T  35077370 tccctccgttcctttataactgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgtt 35077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 47844101 - 47844011
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||| ||| |||| |||||  | ||| ||||| |||||| ||||||||||||    |||||||||| |||||||||||||    
T  47844101 tccctccgttcctttataactgtcacttttacataaattttttatttctaattaactgtcactttcaaagttcaatgtaatattaaatgtt 47844011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 51064866 - 51064956
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| ||||  ||||| ||||  |||||||| ||  ||||||||||||    ||||||||| ||||||||||||||    
T  51064866 tccctccgttcctttttaattgtcatttttggagaatttttttgttcctgattaactgtcactttcaaagttcaatacaatattaaatgtt 51064956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 2154261 - 2154190
Alignment:
Q  295 ttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttag 359  Q
    ||||| ||||||||||||||||    ||||||||||||| ||||||||||   |||||||||||| ||||||    
T  2154261 ttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtcttatcaatattactcttag 2154190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 22174105 - 22174045
Alignment:
Q  252 attccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgt 312  Q
    ||||| ||| ||| ||||||||||||| ||||| | ||| ||||||||| |||||||||||    
T  22174105 attccatccgttcatttttaagtgtcttttttggataaattttttgtttttatttaactgt 22174045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 28226407 - 28226500
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| |||| ||||||| ||| |||| |||||  | ||| |||||||||||| ||||||||||||    |||||||||| || ||||||||||    
T  28226407 tattctctccgttcctttataactgtcgcttttacataaattttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgtt 28226500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 41926656 - 41926696
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaa 291  Q
    |||||||||| ||| ||||||||||||||||||| ||||||    
T  41926656 tattccctccattcttttttaagtgtctcttttgaagaaaa 41926696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 4175734 - 4175532
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||||||    
T  4175734 tccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatca 4175635  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||||||| | | ||||| |||  ||||| ||||||||    
T  4175634 atattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggttattatagtaaaagtatagcttattgtatcaaaa 4175535  T
Q  447 gta 449  Q
    |||    
T  4175534 gta 4175532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 18794748 - 18794950
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  18794748 tccctccattcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 18794847  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| |||||    || | ||||||  ||||| ||||||||||||||||| ||| ||| | | ||||| |||  |||||| |||||||    
T  18794848 atattgtccttagttatttattgtggagagagaaatatatgaaataagatattaaatgaataaggtcattatagtaaaagtatagcttattacatcaaaa 18794947  T
Q  447 gta 449  Q
    |||    
T  18794948 gta 18794950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 449
Target Start/End: Original strand, 26906470 - 26906657
Alignment:
Q  267 ttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt----ttatcaatattattctta 358  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||    ||||||||||||  ||||||||||    ||| |||||| |  ||||    
T  26906470 ttttaagtatcacttttgtagaaa-tttttgtttctatttaactgtcactttcaaagttcaatgcagcattaaatgttgtttttaccaatatcaccctta 26906568  T
Q  359 gttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| |||||||| || |  |||||  ||||||||||||||||||||||   |||||| |||||||||||||| ||||| |||||||||||    
T  26906569 gttatttattacagagag--aaatatatgaaacaagatattaaatgaatgatgttattattggaaaaggataaattattgtatcaaaagta 26906657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 24075092 - 24074890
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||||||||||||||||||||||  ||||  ||||||||| |||||||||||||||    ||||||||||||| ||||||||   ||||||||    
T  24075092 tccctccattcctttttaagtgtctcttttaaagaatttttttgtttatatttaactgtcactttcaaagttcaatgcaacattaaatgatattttatca 24074993  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    |||||| ||||| ||| ||||| |  || | ||||||  ||||| ||||||||||||||||| | | ||| | | ||||| |||| |||||  |||||||    
T  24074992 atattactcttaattatttattgcggagagagaaatatatgaaataagatattaaatgaataagttcattatagtaaaagtataacttattgcatcaaaa 24074893  T
Q  447 gta 449  Q
    |||    
T  24074892 gta 24074890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 42911515 - 42911717
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  42911515 tccctccgtttctttttaagtgtctcttttggagaaaatttttgttactatttaactgtcactttcaaagttcaatgcaacattaaatattgttttacca 42911614  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || |  |||||  |||||  |||| ||||||||||||| | ||| | | ||||| |||| |||||  |||||||    
T  42911615 atattatccttagttatttattgcggagagataaatatatgaaatgagatgttaaatgaatatgatcattatagtaaaagtataacttattgcatcaaaa 42911714  T
Q  447 gta 449  Q
    |||    
T  42911715 gta 42911717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 437
Target Start/End: Complemental strand, 7579922 - 7579732
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  7579922 tccctccgttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcgaagttcaatgcaacattaaatgttgttttacca 7579823  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttatt 437  Q
    ||||| | |||||||| ||||| |  |  | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| ||| ||||||    
T  7579822 atattgtccttagttatttattgcggaaagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagtttatt 7579732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 40198761 - 40198955
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||| ||| ||||||   ||||||| |||||||||     
T  40198761 ttcctttttaagtgtctcttttggagaaattttttgttactatttaactgtcactttcaaagttcaatacaacattaaatgttgttttaccaatattatc 40198860  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    | |||||| ||||| |  || | ||||||| |||||  |||| ||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  40198861 cgtagttatttattgcggagagagaaataaatgaaatgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 40198955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 256 - 449
Target Start/End: Original strand, 34261279 - 34261479
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||    |||||||||||||  |||||   ||||||| ||||    
T  34261279 cctccattcttttttaagtgtcaattttgcagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacgttaaatgttgttttaccaat 34261378  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    ||||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||  |||  ||||| ||||||||||    
T  34261379 attatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaaatatagcttattgtatcaaaagt 34261478  T
Q  449 a 449  Q
    |    
T  34261479 a 34261479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 38910242 - 38910361
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||    
T  38910242 ctccgttcttttttaagtgtcacttttggagaaattttttgtttctatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaata 38910341  T
Q  350 ttattcttagttaattatta 369  Q
    |||| |||||||| ||||||    
T  38910342 ttatccttagttatttatta 38910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 4985428 - 4985227
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatatta---aatgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| || |  |||||||||||||||||||||||||    ||||||||||||| ||||   ||||||||||||    
T  4985428 tccctccgttcctttttaagtgtctcttttggag-atttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaataatgttttatca 4985330  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||  |||| ||| |||||    || | ||||||  ||||| ||||||||||||||||| ||| ||| | | ||||  |||| |||||  |||||||    
T  4985329 atattacccttaattatttattgaggagagagaaatatatgaaataagatattaaatgaataaggtcattatagtaaaaatataacttattgcatcaaaa 4985230  T
Q  447 gta 449  Q
    |||    
T  4985229 gta 4985227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 449
Target Start/End: Complemental strand, 28024505 - 28024311
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||    |||||||||| || ||||||   ||||||| |||||||||     
T  28024505 ttcctttttaagtgtctcttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgttttaccaatattatc 28024406  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| ||||| |  || | ||||||  | |||  |||| ||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  28024405 cttagttatttattgcggagagagaaatatataaaatgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 28024311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 437
Target Start/End: Complemental strand, 28463639 - 28463449
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||||||| |||||||||||||||    ||||||||||||| | ||||   ||||||| ||    
T  28463639 tccctccgttcctttttaagtgtcacttttggagaaattttttgtttttatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttacca 28463540  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttatt 437  Q
    | ||||  |||||||| ||||| |  || | ||||||  ||||| |||||||||||||| || ||||||| | | ||||| |||| |||||    
T  28463539 acattacccttagttatttattgcggagagagaaatatatgaaataagatattaaatgactaaggttattatagtaaaagtataaattatt 28463449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 18465674 - 18465787
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  18465674 ttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgccactttcaaagttcaatgcaacattaaatattgttttaccaatattatc 18465773  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  18465774 cttagttatttatt 18465787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 26854340 - 26854227
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  26854340 ttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcacttccaaagttcaatgcaacattaaatgttgttttaccaatattatc 26854241  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  26854240 cttagttatttatt 26854227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 28447238 - 28447125
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    ||||| ||||||| ||||||||   |||||| |    
T  28447238 tccctccgttcctttttaagtgtctcttttggagaaaatttttgttcctatttaactctcactttcaaagttaaatgcaacattaaatgttattttataa 28447139  T
Q  347 atattattcttagt 360  Q
    ||||||| ||||||    
T  28447138 atattatccttagt 28447125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 450
Target Start/End: Original strand, 4017390 - 4017582
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatcaatattattctt 357  Q
    ||||||||  |||||||||| ||||| ||||||||  |||||||||||||||    |||||||||||||||||||||||   |||| ||||||||| |||    
T  4017390 ctttttaaccgtctcttttgaagaaattttttgttcttatttaactgtcacttttaaagttcaatgcaatattaaatgttgatttaccaatattatcctt 4017489  T
Q  358 agttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagtaa 450  Q
    ||||| ||||| |  |  | ||||||  |||||  |||| ||||||||||| ||||||| | | ||||| |||| |||||  |||||||||||    
T  4017490 agttatttattgcggaaagagaaatatatgaaatgagatgttaaatgaataaggttattatagtaaaagaataacttattgcatcaaaagtaa 4017582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 452
Target Start/End: Original strand, 4098293 - 4098501
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgtttta 343  Q
    |||||||||| || |||||||||| || |||||| |||||||||||||||| ||||||||||||||    ||||||| | ||| ||||||   ||||||     
T  4098293 tattccctccgtttctttttaagtatcacttttggagaaaatttttgtttcaatttaactgtcacttttaaagttcagtacaacattaaatgttgttttg 4098392  T
Q  344 tcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatca 443  Q
     ||||||||| ||| |||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||| | |||| ||||| |||||    
T  4098393 ccaatattatcctttgttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaggtataacttattgtatca 4098492  T
Q  444 aaagtaata 452  Q
    |||||||||    
T  4098493 aaagtaata 4098501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 10889348 - 10889258
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||| |    ||||||||||||| ||||||||||    
T  10889348 tccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcatttttaaagttcaatgcaacattaaatgtt 10889258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 14794042 - 14793923
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||| |||    ||||||||||||| ||||||   ||||||||||||    
T  14794042 cctccgttcctttttaaatgtctgttttggagaaattttttgtttctatttaaatgttactttcaaagttcaatgcaacattaaatgttgttttatcaat 14793943  T
Q  349 attattcttagttaattatt 368  Q
    ||||| |||||||| |||||    
T  14793942 attatccttagttatttatt 14793923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 449
Target Start/End: Original strand, 5119147 - 5119345
Alignment:
Q  258 tcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatat 350  Q
    ||||||||||||||||| ||||||||| ||||  |||||||||||||||||||| ||||    ||||||||||||  ||||||   ||||||| ||||||    
T  5119147 tcctttcctttttaagtttctcttttggagaatttttttgtttctatttaactgccactttcaaagttcaatgcatcattaaatattgttttaccaatat 5119246  T
Q  351 tattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||| ||| |||| |||||||  || |  |||||  |||||  |||| |||||| |||| ||||||| | | ||||| |||| |||||  ||||||||||    
T  5119247 tatcctttgttatttattactgagagaaaaatatatgaaatgagatgttaaattaataaggttattatagtaaaagtataacttattgcatcaaaagta 5119345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 6072417 - 6072619
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||| ||| |||||| ||||||||||||||  ||||||||||| |||    ||||||||||||| ||||||   ||||||| ||    
T  6072417 tccctccgtttctttttaagcgtcacttttggagaaaatttttgttcttatttaactgttactttcaaagttcaatgcaacattaaatgttgttttacca 6072516  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| |||||||  || | ||||||  | |||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  6072517 atattgtccttagttatttattacggagagagaaatatattaaatgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 6072616  T
Q  447 gta 449  Q
    |||    
T  6072617 gta 6072619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 449
Target Start/End: Original strand, 9076056 - 9076238
Alignment:
Q  274 tgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaatta 366  Q
    |||| |||||| | |||| ||||||| ||||||||||||||||    ||||||||||||| ||||||||||   ||||||||||| | |||||||| |||    
T  9076056 tgtcacttttggataaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattgtccttagttattta 9076155  T
Q  367 ttacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    || |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| ||||||||||  ||||||||||    
T  9076156 ttgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataatttattgcatcaaaagta 9076238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 39073009 - 39073211
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  ||||| | ||||  |||||| ||||||||||||||    | ||||||||||||| ||||||   ||||||| ||    
T  39073009 tccctccgttcctttttaagtgtcaattttggaaaaaaaatttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttacca 39073108  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||||||| | | ||||| |||  |||||  |||||||    
T  39073109 atattatccttagttatttattgcgaagtgagaaatatatgaaatgagatattaaatgaataaggttattatagtaaaagtatagcttattgcatcaaaa 39073208  T
Q  447 gta 449  Q
    |||    
T  39073209 gta 39073211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 12664823 - 12664944
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatca 346  Q
    ||||||| || ||||||||||||  |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| |||||||   |||||| ||    
T  12664823 tccctccgtttctttttaagtgttacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtagttttacca 12664922  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  12664923 atattgtccttagttatttatt 12664944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 416
Target Start/End: Original strand, 25343933 - 25344094
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||| || |||    || |||||||||| ||||||   ||||||| ||||||| |     
T  25343933 ttcctttgtaagtgtcacttttggagaaaatttttgtttctatttaaccgttactttcaaatttcaatgcaacattaaatgttgttttaccaatattgtc 25344032  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| |||||||    
T  25344033 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggttatt 25344094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 449
Target Start/End: Original strand, 36239424 - 36239625
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtaga-aaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatcaa 347  Q
    ||||| ||||||||||||||||||||||| |||    |||||||||||||||||||||||||    ||||||||||||| |||||   ||||||||||||    
T  36239424 cctccgttcctttttaagtgtctcttttggagatttttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaa 36239523  T
Q  348 tattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaag 447  Q
    |||||  |||| ||| ||||| |  || | ||||||  ||||| |||||||||||| |||| ||| ||| | | ||||  |||| |||||  ||||||||    
T  36239524 tattacccttaattatttattgcggagagagaaatatatgaaataagatattaaattaataaggtcattatagtaaaaatataacttattgcatcaaaag 36239623  T
Q  448 ta 449  Q
    ||    
T  36239624 ta 36239625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 6007856 - 6007938
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    ||||||||||||  ||||||||||    
T  6007856 ttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcatcattaaatgtt 6007938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 21606512 - 21606422
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||||||    
T  21606512 tccctccgttcctttttaaatgtctcttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 21606422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 38363164 - 38363246
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||  |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  38363164 ttcctttttaagtgttacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 38363246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 42394382 - 42394292
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||||||    
T  42394382 tccctccgttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 42394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 449
Target Start/End: Complemental strand, 4427657 - 4427458
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||  |||| ||||||||||    |||||||||| || ||||||   ||||||| |||||    
T  4427657 ctccgttcctttttaagtgtttcttttggagaaattttttgttcatattcaactgtcactttcaaagttcaatgaaacattaaatgttgttttaccaata 4427558  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| |||||||| |||||||  || | ||||||  |||||  |||| |||||||| |  ||| ||| | | ||||| |||| ||||| |||||||||||    
T  4427557 ttatccttagttatttattacggagagagaaatatatgaaatgagatgttaaatgagtgaggtcattatagtaaaagtataacttattgtatcaaaagta 4427458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 461
Target Start/End: Original strand, 31802765 - 31802967
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattattctt 357  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||||    | ||||||||||||| ||||||   ||||||| ||||||||  |||    
T  31802765 ctttttaagtgtctcttttggagaaaa-ttttgtttcaatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattaccctt 31802863  T
Q  358 agttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagtaatactccc 457  Q
    ||||| |||||    || |  || ||  ||||| |||||||||||| |||| ||| ||| |   ||||| |||| ||||| ||||||||||| |||||||    
T  31802864 agttatttattgtggagagaaaattatatgaaagaagatattaaattaataaggtcattatgataaaagtataaattattgtatcaaaagtagtactccc 31802963  T
Q  458 tccg 461  Q
    ||||    
T  31802964 tccg 31802967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 1297989 - 1297871
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||    || |||||||||| ||||||   ||||||| |||||    
T  1297989 ctccgttcttttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaaattcaatgcaacattaaatattgttttaccaata 1297890  T
Q  350 ttattcttagttaattatt 368  Q
    || | |||||||| |||||    
T  1297889 ttgtccttagttatttatt 1297871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 4689048 - 4688891
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||||  ||||| |||||| |||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||| |||||    
T  4689048 ctccgttcctttttaagtgtca-ttttgaagaaaaattttgttcatatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaata 4688950  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| |||||||| ||||| || || |  |||||  |||||  ||||||||||||||||    
T  4688949 ttatccttagttatttattgcagagagaaaaatatatgaaatgagatattaaatgaata 4688891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 449
Target Start/End: Complemental strand, 8230049 - 8229855
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||||||||    | ||||||||||||| ||||||   ||||||| |||||||||     
T  8230049 ttcctttttaagtgtctattttgaagaaattttttattcctatttaactgtcattttccaagttcaatgcaacattaaatgttgttttaccaatattatc 8229950  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| ||||| |  || | ||||||  |||||  |||| ||||||||||| ||| | | | | ||||| |||| |||||  ||||||||||    
T  8229949 cttagttatttattccggagagagaaatatatgaaatgagatgttaaatgaataaggtcactatagtaaaagtataacttattgcatcaaaagta 8229855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 21157600 - 21157688
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||||||||| |||| |||||| | |||||||||||||||| ||||||||||||    ||||||||||||| ||||||||||    
T  21157600 cctccgttcctttttaattgtcacttttgcataaaatttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgtt 21157688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 405
Target Start/End: Complemental strand, 32440158 - 32440008
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattatt 354  Q
    |||||||||||||||| |||| | |||||||||||||| ||||||||||||||||    ||||||||||||| | ||||||||   ||| ||| ||||      
T  32440158 ttcctttttaagtgtcactttaggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacc 32440059  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
     ||||||| ||||| || || | ||||||  ||||| ||||||||||||||    
T  32440058 tttagttatttattgcagagagagaaatacatgaaataagatattaaatga 32440008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 38702106 - 38702308
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||   ||||||| ||    
T  38702106 tccctccgttcctttttaagtgtcaattttggagaaattttttgttcctatttaactgtcactttcgaagttcaatgcaacaataaatgttgttttacca 38702205  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||| ||| ||||| |  || | ||||||  ||||| |||||||||||| |||| ||| ||| | | ||||| |||  |||||  |||||||    
T  38702206 atattgtccttaattatttattgcggagagagaaatatatgaaataagatattaaataaataaggtcattatagtaaaagtatagcttattgcatcaaaa 38702305  T
Q  447 gta 449  Q
    |||    
T  38702306 gta 38702308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 404
Target Start/End: Original strand, 425094 - 425251
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||| |||||||||||| |||||| ||||| ||||||||||| |||||||||||    | ||||||||||||| | ||||   ||||||| ||    
T  425094 tccctccgttcatttttaagtgtcacttttggagaaattttttgtttctgtttaactgtcattttcaaagttcaatgcaacaataaatgttgttttacca 425193  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatg 404  Q
    | |||  ||||||||| ||||| |  || | ||||||| ||||| |||||||||||||    
T  425194 acatttctcttagttatttattgcggagagagaaataaatgaaataagatattaaatg 425251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 368
Target Start/End: Original strand, 6689576 - 6689685
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    |||| |||||||||||||| ||||| ||||||||||| |||| ||||||||    ||||||||||||| ||||||   ||||||| ||||||||||||||    
T  6689576 ttttcaagtgtctcttttggagaaattttttgtttctgtttatctgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattattctta 6689675  T
Q  359 gttaattatt 368  Q
     ||| |||||    
T  6689676 attatttatt 6689685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 9127605 - 9127444
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||||||||||||||||| |||||  |||| ||||||||  ||||||| |||||||    ||||||||||||| ||||||||   ||||| ||    
T  9127605 tccctccgttcctttttaagtgtctattttgatgaaattttttgttcgtatttaattgtcacttttaaagttcaatgcaacattaaatgttattttacca 9127506  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||  ||| ||| |||||||  || | ||||||  | ||| |||||||||||||||||    
T  9127505 atattatctttaattatttattacggagagagaaatatataaaataagatattaaatgaata 9127444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 38503054 - 38502992
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  38503054 tccctccgttcctttttaagtgtctcttttgaagaaattttttgttcatatttaactgtcact 38502992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 368
Target Start/End: Complemental strand, 18020997 - 18020901
Alignment:
Q  279 cttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattatt 368  Q
    |||||| |||||||||||||||||||||||||||||||    || |||||||||| ||||||   ||||||| ||||||||| |||||||| |||||    
T  18020997 cttttgaagaaaatttttgtttctatttaactgtcactttcaaaattcaatgcaacattaaatgttgttttaccaatattatccttagttatttatt 18020901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 19831786 - 19831704
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||||||| ||||  ||||| ||||||||||||||||||| |||||    ||||||||||||| ||||||||||    
T  19831786 ttcctttttaagtgtcttttttagagaaattttttgtttctatttaactctcactttcaaagttcaatgcaacattaaatgtt 19831704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 25027976 - 25027857
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||| | ||||||||||||    | |||||||||||||  |||||   ||||||||||||    
T  25027976 cctccgttcctttttaagtgtcacttttggagaaattttttgttccaatttaactgtcattttcaaagttcaatgcaactttaaatgttgttttatcaat 25027877  T
Q  349 attattcttagttaattatt 368  Q
    ||||  |||||||| |||||    
T  25027876 attacccttagttatttatt 25027857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 4694729 - 4694931
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||| ||||||||| ||||||||| ||||  ||||||||  |||||||||||||||    ||||||||||||| |||| |||   |||||  |    
T  4694729 tccctccgttcatttttaagtatctcttttggagaatttttttgttcatatttaactgtcactttcaaagttcaatgcaacattagatgttattttacta 4694828  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  |||| ||||||||| | ||| ||| | | ||||| |||| |||||| |||||||    
T  4694829 atattatccttagttatttattgcggagagagaaatatatgaaatgagatgttaaatgaacaaggtcattatagtaaaagtataacttattacatcaaaa 4694928  T
Q  447 gta 449  Q
    |||    
T  4694929 gta 4694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 449
Target Start/End: Complemental strand, 6754401 - 6754231
Alignment:
Q  286 agaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaattattacatagggcg 378  Q
    |||||| ||||||| ||||||||||||||||    ||||||||| ||| ||||||||||   |||||||||| ||| ||||||| ||||| |  || | |    
T  6754401 agaaaagttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgttttatcaatatcatttttagttatttattgcggagagag 6754302  T
Q  379 aaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||  ||||| ||||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  6754301 aaatatatgaaataagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagta 6754231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 8825030 - 8825224
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||  ||||  ||||| ||||||||  |||||||||||||    | ||||||||||||| ||||||   ||||||| ||||||| |     
T  8825030 ttcctttttaagtgtcattttttgagaaattttttgttcatatttaactgtcattttcgaagttcaatgcaacattaaatgttgttttaccaatattgtc 8825129  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| ||| ||||||  ||||||||||    
T  8825130 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagta 8825224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 21150459 - 21150547
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||||||||| |||| |||||| | ||| |||||||||||| ||||||||||||    ||||||||||||| ||||||||||    
T  21150459 cctccgttcctttttaattgtcacttttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgtt 21150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 452
Target Start/End: Complemental strand, 38017525 - 38017326
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||      ||||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  38017525 tccctccgttcctttttaagtgtc------gtagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 38017432  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    |||||||  ||||||| ||||| |  || | ||||||  |||||   ||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  38017431 atattatctttagttatttattgcggagagagaaatatatgaaatgtgatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 38017332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 446
Target Start/End: Original strand, 7403819 - 7404016
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||| |||||||| ||||   ||||| ||||||||  ||||||||| |||||    ||||||||||||||||||||   ||||||| ||    
T  7403819 tccctccgttcctttataagtgtcactttg--agaaattttttgttcatatttaactctcactttcaaagttcaatgcaatattaaatgttgttttacca 7403916  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  ||    |||||  |||||  |||||||||||||||| ||| ||| | | ||||| ||||||||||  |||||||    
T  7403917 atattatccttagttatttattgcggagaaataaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataatttattgcatcaaaa 7404016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 9959131 - 9959041
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||| ||||| | |||  |||||||||||||||||||||||| ||| ||    |||||||||||||||| |||||||    
T  9959131 tccctccgttcctttttacgtgtcacatttagagaaaatttttgtttctatttaaccgtcgctttcaaagttcaatgcaatatcaaatgtt 9959041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 368
Target Start/End: Complemental strand, 10359464 - 10359368
Alignment:
Q  279 cttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattatt 368  Q
    |||||| |||||||||||||||||||||||||||||    | ||||||||||||| ||||||   ||||||| ||||||| | |||||||| |||||    
T  10359464 cttttggagaaaatttttgtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttatt 10359368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 31985304 - 31985218
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa 336  Q
    ||||||| ||||||||||||||||||||  | ||||| ||||||||| |||| ||||||||||    ||||||||||||| ||||||    
T  31985304 tccctccgttcctttttaagtgtctcttgcggagaaattttttgtttatattcaactgtcactttcaaagttcaatgcaacattaaa 31985218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 405
Target Start/End: Complemental strand, 5144252 - 5144094
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| ||||  ||||| ||||| |||||||| |||||||| |||||||    ||||||||||||| | ||||   ||||||| ||    
T  5144252 tccctccgttcctttttaattgtcatttttggagaaattttttgttcctatttaagtgtcactttcaaagttcaatgcaacaataaatcttgttttacca 5144153  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    | ||||  |||| ||| |||||||  || | ||||||  ||||| ||||||||||||||    
T  5144152 acattacccttaattatttattacggagagagaaatatatgaaataagatattaaatga 5144094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 449
Target Start/End: Complemental strand, 12870141 - 12869951
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    |||||||||||| |||||  ||||||  |||||| ||||||||||||||||    ||||||||| ||| ||||||   ||||||| ||||||| ||||||    
T  12870141 tttttaagtgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgttttaccaatattgttctta 12870042  T
Q  359 gttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| ||||| |  || | ||||||  | |||  | |||||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  12870041 gttatttattgcggagagagaaatatataaaatgaaatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 12869951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 18437566 - 18437515
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    |||||||||||||||||||| ||||| |||||||||| |||||| |||||||    
T  18437566 ctttttaagtgtctcttttgaagaaattttttgtttcaatttaagtgtcact 18437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 1795371 - 1795309
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||||||   ||||||||||||||    
T  1795371 tccctccgttcctttttaagtgtcacttttggagaaattttttgttctcatttaactgtcact 1795309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 2134152 - 2134039
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||  ||||| ||||||||  ||||||| ||| |||    ||||||||||||| ||||||   ||||||  |||||||||     
T  2134152 ttcctttttaagtgtctcttttaaagaaattttttgttcttatttaattgttactttcaaagttcaatgcaacattaaatgttgttttgccaatattatc 2134053  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  2134052 cttagttatttatt 2134039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 38297871 - 38297780
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaa-atttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| |||||||||||||||| |||||| |||||  ||||||||  |||||||||||||||    ||||||||||||| | ||||||||    
T  38297871 tccctccgttcctttttaagtgtcacttttggagaaatttttttgttcatatttaactgtcactttcaaagttcaatgcaacaataaatgtt 38297780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 449
Target Start/End: Original strand, 7408363 - 7408498
Alignment:
Q  317 aagttcaatgcaatattaaat---gttttatcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggtt 413  Q
    |||||||| ||||||||||||   |||||| |||||||| ||||| ||| ||||||   || |  |||||  |||||  |||||||||||||||| ||||    
T  7408363 aagttcaaagcaatattaaatattgttttaccaatattactcttacttatttattatggagagaaaaatatatgaaatgagatattaaatgaataaggtt 7408462  T
Q  414 atttttggaaaaggataatttattatatcaaaagta 449  Q
    ||| | | ||||| |||| ||||| |||||||||||    
T  7408463 attatagtaaaagtataaattattgtatcaaaagta 7408498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 25785874 - 25785962
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||||||||| |||| ||| || ||||| |||| ||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  25785874 cctccgttcctttttaattgtcacttctgcagaaatttttagtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 25785962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 340
Target Start/End: Complemental strand, 4962429 - 4962350
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgttt-ctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||||||||  | ||| ||||||||| ||||||||||||||||    |||||||||| || ||||||||||    
T  4962429 tttttaagtgtctcttttagaaaaactttttgtttcctatttaactgtcactttcaaagttcaatggaacattaaatgtt 4962350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 12784696 - 12784634
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| || |||||||| ||||  ||||| |||||| ||||||| ||||||||||||||||    
T  12784696 tccctccgtttctttttaactgtcatttttggagaaaaattttgttcctatttaactgtcact 12784634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 30368369 - 30368307
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| ||||||||||||||||||||||  ||||  ||||||||  ||||||| |||||||    
T  30368369 tccctccgttcctttttaagtgtctcttttaaagaatttttttgttcttatttaagtgtcact 30368307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 11413776 - 11413694
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||| | ||| ||||||||| || |||||| |||||    ||||||||||||| ||||||||||    
T  11413776 ttcctttttaattgtcacttttgcataaattttttgtttttaattaactatcactttcaaagttcaatgcaacattaaatgtt 11413694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 18393217 - 18393135
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||| | ||  |||||||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  18393217 ttcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 18393135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 6e-32; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 254 - 452
Target Start/End: Original strand, 14263527 - 14263732
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  14263527 tccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttaaaagttcaatgcaacattaaatgttgttttacca 14263626  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  14263627 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 14263726  T
Q  447 gtaata 452  Q
    ||||||    
T  14263727 gtaata 14263732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 23429892 - 23430094
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  23429892 tccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 23429991  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| || || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  23429992 atattatccttagttatttattgcagagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 23430091  T
Q  447 gta 449  Q
    |||    
T  23430092 gta 23430094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 251 - 408
Target Start/End: Complemental strand, 16701153 - 16700989
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgtttta 343  Q
    |||||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||| ||||||||||   |||||||    
T  16701153 tattccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcacttttaaagttcaatacaatattaaatgttgtttta 16701054  T
Q  344 tcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
     ||||||||| |||||||| ||||| |  || | ||||||  ||||| |||||||||||||||||    
T  16701053 ccaatattatccttagttatttattgcggagagagaaatatatgaaataagatattaaatgaata 16700989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 346 - 449
Target Start/End: Complemental strand, 41643648 - 41643545
Alignment:
Q  346 aatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaa 445  Q
    |||||||  |||||||| |||||||  || | ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  41643648 aatattacccttagttatttattacgaagagagaaataattgaaacaagatattaaatgaatgaggttattattggaaaaggataatttattatatcaaa 41643549  T
Q  446 agta 449  Q
    ||||    
T  41643548 agta 41643545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 452
Target Start/End: Original strand, 15596327 - 15596532
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    |||||||||| || |||||   |||||||||||    
T  15596327 tccctccgttcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgtaaaattaaatgatgttttatca 15596426  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||   ||| ||| ||||| |  || | ||||||  ||||| ||||||||||||||||| ||||||| | | ||||| |||| |||||  || ||||    
T  15596427 atattacctttaattatttattgcggagagagaaatatatgaaataagatattaaatgaataaggttattatagtaaaagtataacttattgcataaaaa 15596526  T
Q  447 gtaata 452  Q
    ||||||    
T  15596527 gtaata 15596532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 18291447 - 18291648
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||    ||||||||||||||||||||   ||||||| |     
T  18291447 tccctccgttcctttttaagtgtctcctttgaagaaattttttgttgctatttaactgtcactttcaaagttcaatgcaatattaaatattgtttta-cc 18291545  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| |||||||  || | ||||||  |||||  | |||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  18291546 atattatccttagttatttattacggagagagaaatatatgaaatgaaatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 18291645  T
Q  447 gta 449  Q
    |||    
T  18291646 gta 18291648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 38128797 - 38128602
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcactaagttcaatgcaatattaaa---tgttttatcaatat 350  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||   |||||||||| ||||||   ||||||| ||||||    
T  38128797 tccctccgttcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcact---ttcaatgcaacattaaatgttgttttaccaatat 38128701  T
Q  351 tattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||| |||||||| ||| |||  ||   ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  38128700 tatccttagttatttactacggagatagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagta 38128602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 36058219 - 36058376
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt--tttatcaatat 350  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    ||||||||||||| |||||||||  |||  ||||||    
T  36058219 ctccgttcctttttaagtgtctcttttgaagaaattttttgtttctatttaactatcactttcaaagttcaatgcaacattaaatgttgttttacaatat 36058318  T
Q  351 tattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  36058319 tatccttagttatttattgctgagagagaaatatatgaaatgagatattaaatgaata 36058376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 452
Target Start/End: Original strand, 9954634 - 9954837
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| |||||| ||| ||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  9954634 cctccgttcctttttaagtgtcacttttggagaaaaatttagttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaat 9954733  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    ||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||||    
T  9954734 attgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatggtaaaagtataacttattgcatcaaaagt 9954833  T
Q  449 aata 452  Q
    ||||    
T  9954834 aata 9954837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 446
Target Start/End: Original strand, 34046834 - 34047033
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||  ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  34046834 tccctccgttcctttttaagtgtcacttttagagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatattgttttacca 34046933  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| ||| ||||||  |||||||    
T  34046934 atattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaa 34047033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 33935317 - 33935156
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||  |||||| |||||||||||||| ||||||||||||||||    ||||| ||||||| ||||||   ||||||| ||    
T  33935317 tccctccgttcctttttaagtgttacttttgaagaaaatttttgttcctatttaactgtcactttcaaagtttaatgcaacattaaatattgttttacca 33935218  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  33935217 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 33935156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 13327770 - 13327852
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    ||||||||||||| ||||||||||    
T  13327770 ttcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 13327852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 408
Target Start/End: Complemental strand, 23848811 - 23848652
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    || || ||||||| ||||||   ||||||| ||||    
T  23848811 cctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaaatttaatgcaacattaaatgttgttttaccaat 23848712  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||| ||| |||| ||||| |  || | ||||||  ||||| |||||||||||||||||    
T  23848711 attatccttggttatttattgcggagagagaaatatatgaaataagatattaaatgaata 23848652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 43553500 - 43553377
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    | ||||||||||||| ||||||   | ||||| ||    
T  43553500 tccctccgttcctttttaagtgtctcttttggagaaattttttgttcctatttaactgtcattttcgaagttcaatgcaacattaaatattattttacca 43553401  T
Q  347 atattattcttagttaattattac 370  Q
    ||||||| |||| ||| |||||||    
T  43553400 atattatccttacttatttattac 43553377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 34981812 - 34982014
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| ||||| |||||||| ||| ||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  34981812 tccctccgttactttttaagtgtcgcttttggagaaattttttgttcctacttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 34981911  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  34981912 atattgtccttagttatttattgcggagagagaaatacatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 34982011  T
Q  447 gta 449  Q
    |||    
T  34982012 gta 34982014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 167734 - 167613
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| |||||| ||||||||  ||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  167734 tccctccgtttctttttaagtgtcacttttggagaaaaattttgttttaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 167635  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  167634 atattatccttagttatttatt 167613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 16656684 - 16656844
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| ||||||  ||||||   ||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  16656684 tccctccgtttctttttaagtgtcacttttggagaaaaaatttgttctcatttaactgtcactttcaaagttcaatgcaaaattaaatgttgttttagca 16656783  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||||||||||| |||||| |  || | ||||||  ||||| |||||||||||||||||    
T  16656784 atattattcttagtt-attattgcggagagagaaatatatgaaataagatattaaatgaata 16656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 27518961 - 27518874
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||| ||| ||||||||||    
T  27518961 ctccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgtt 27518874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 11993884 - 11993966
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    ||||| ||||||| ||||||||||    
T  11993884 ttcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcactttcaaagtttaatgcaacattaaatgtt 11993966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 39303773 - 39303683
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  39303773 tccctccgttcctttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcgaagttcaatgcaacattaaatgtt 39303683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 18842510 - 18842603
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||| |||||||||||||||| |||||| ||||  |||||||| |||||||| |||||||     |||||||||||||||||||||||    
T  18842510 tattccctccgttcctttttaagtgtcacttttggagaatttttttgttcctatttaagtgtcactttactagttcaatgcaatattaaatgtt 18842603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 449
Target Start/End: Complemental strand, 21652000 - 21651801
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||| | ||||    ||||||||||||| ||||||   ||||||| |||||    
T  21652000 ctccgttcctttttaagtgtcttttttgaagaaattttttgttcctatttaaccgccacttttaaagttcaatgcaacattaaatgttgttttaccaata 21651901  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| |||||||| ||||| |  |  | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| | || |||||  ||||||||||    
T  21651900 ttatccttagttatttattgcggaaagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaagttattgcatcaaaagta 21651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 340
Target Start/End: Complemental strand, 7606147 - 7606064
Alignment:
Q  261 tttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| ||||||| ||||| ||||||||  |||||||||||||||    ||||||||| ||||||||||||||    
T  7606147 tttcctttttaagtgtatcttttgaagaaattttttgttcttatttaactgtcacttttcaagttcaatacaatattaaatgtt 7606064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 12763426 - 12763578
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| || ||||||||||||| ||||||| ||||||    |||||||||||||  |||||   ||||||||||||||||      
T  12763426 ttcctttttaagtgtcacttttggag-aaatttttgtttcaatttaaccgtcactttcaaagttcaatgcaactttaaatgttgttttatcaatattacc 12763524  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  12763525 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 12763578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 3720663 - 3720753
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| |||| |||||| | ||| |||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  3720663 tccctccgttcctttttaattgtcacttttgaataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 3720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 449
Target Start/End: Original strand, 10180355 - 10180555
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||    ||||| ||||||| ||||||   | ||||| ||||    
T  10180355 cctccattcctttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagtttaatgcaacattaaacgttattttaccaat 10180454  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    |||||  ||||||| ||||| |  ||   ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| | || |||||  |||||||||    
T  10180455 attatctttagttatttattgcggagaaagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagt 10180554  T
Q  449 a 449  Q
    |    
T  10180555 a 10180555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 11707738 - 11707581
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| |||||||||||||||||    || |||   |||||||||||||||||||||||||    ||||||||||||| ||||||||   ||||||||    
T  11707738 tccctccgttcctttttaagtgtct----tggagattttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatca 11707643  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||  |||| ||| ||||| |  || | ||||||  ||||| |||||||||||||||||    
T  11707642 atattacccttaattatttattgcggagagagaaatatatgaaataagatattaaatgaata 11707581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 38074261 - 38074321
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||| ||||||||||| |||| |||||||||||| |||||||||||| ||||||||||||    
T  38074261 cctccgttcctttttaattgtcacttttgtagaaattttttgtttctaattaactgtcact 38074321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 405
Target Start/End: Original strand, 2335424 - 2335574
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| ||||      
T  2335424 ttcctttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacc 2335523  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    |||||||| ||||| |  || | ||||||  ||||| ||||||||||||||    
T  2335524 cttagttatttattgcggagagagaaatatatgaaataagatattaaatga 2335574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 2888725 - 2888634
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||      |||||||||||| ||||||||||    
T  2888725 tccctccgttcctttttaagtgtctcttttggagaatttttttgttcctatttaagtgtcactttacatagttcaatgcaacattaaatgtt 2888634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 405
Target Start/End: Original strand, 6750606 - 6750756
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||| ||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| ||||      
T  6750606 ttcctttttaattgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacc 6750705  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    |||||||| |||||||  || | ||||||  ||||| ||||||||||||||    
T  6750706 cttagttatttattacggagagagaaatatatgaaataagatattaaatga 6750756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 405
Target Start/End: Original strand, 6757397 - 6757547
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||| ||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| ||||      
T  6757397 ttcctttttaattgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacc 6757496  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    |||||||| |||||||  || | ||||||  ||||| ||||||||||||||    
T  6757497 cttagttatttattacggagagagaaatatatgaaataagatattaaatga 6757547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 43553023 - 43553224
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| | ||||   ||||||| ||||||||||||||    |||||||||||||  |||||   ||||||||||    
T  43553023 tccctccgttcctttttaagtgtcacttttgga-aaaaaaattgtttcaatttaactgtcactttcaaagttcaatgcaactttaaacgttgttttatca 43553121  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||  |||||||| ||||| |  || | ||||||  |||||  | |||||||||||||| || |||| | | ||||| || | ||||| ||||||||    
T  43553122 atattacccttagttatttattgcggagagagaaatatatgaaatgaaatattaaatgaataaggatattatagtaaaagtatcaattattgtatcaaaa 43553221  T
Q  447 gta 449  Q
    |||    
T  43553222 gta 43553224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 17718486 - 17718591
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||||| | ||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  17718486 tccctccgttcctttttaattgtcacttttggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaacgttgttttacca 17718585  T
Q  347 atatta 352  Q
    ||||||    
T  17718586 atatta 17718591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 35296035 - 35296089
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    |||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||    
T  35296035 ttcctttttaagtgtcactttagtagaaattttttgttcctatttaactgtcact 35296089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 352
Target Start/End: Complemental strand, 8453493 - 8453386
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgtttta 343  Q
    |||||| ||| |||||||||||| |||||||||| || || |||||| |||||||||||||||| |    ||||||||||||| |||||   ||||||||    
T  8453493 tattccttccgttcctttttaagcgtctcttttgaag-aattttttgcttctatttaactgtcaattttaaagttcaatgcaacattaaatgatgtttta 8453395  T
Q  344 tcaatatta 352  Q
    |||||||||    
T  8453394 tcaatatta 8453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 8731084 - 8730994
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||| ||||||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||||||    
T  8731084 tccctccgttcctttctaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 8730994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 462
Target Start/End: Original strand, 35051831 - 35052044
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || |||||||||||||||||||| | ||||   ||||| || |||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  35051831 tccctccgtttctttttaagtgtctcttttgaaaaaaa--gttgttcctctttaactgtcactttcgaagttcaatgcaacattaaatattgttttacca 35051928  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||| ||| |||||||  || | |||||   |||||  ||  |||||||||||| ||||||| | | ||||| ||   || || ||||||||    
T  35051929 atattatccttacttatttattacggagagagaaatgtatgaaattagtgattaaatgaataaggttattatagtaaaagtatgcattgttttatcaaaa 35052028  T
Q  447 gtaatactccctccgt 462  Q
    ||| ||||||||||||    
T  35052029 gtagtactccctccgt 35052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 40521492 - 40521411
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||| ||||| ||||| || ||||||||||||||||    ||||||||||||||||||||||||    
T  40521492 ttcctttttaattgtcacttttggagaaatttttt-ttcctatttaactgtcactttcaaagttcaatgcaatattaaatgtt 40521411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 41890513 - 41890595
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||| | ||| |||||||||||| ||||||||||||    ||||||||||||| ||||||||||    
T  41890513 ttcctttttaattgtcacttttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgtt 41890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 353
Target Start/End: Complemental strand, 12342860 - 12342765
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattat 353  Q
    |||||||| | ||||||||| ||||| ||||||||||||||||||| |||||    ||||||||||||| ||||||   ||||||| |||||||||    
T  12342860 ctttttaactctctcttttgaagaaattttttgtttctatttaactatcactttcaaagttcaatgcaacattaaatattgttttaccaatattat 12342765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 449
Target Start/End: Complemental strand, 14061403 - 14061204
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||||  ||||  | |||| |||||||||| |||||||||||||    ||| ||||||||| ||||||   |||||||||||||    
T  14061403 ctccgttcctttttaagtgtcattttttgaaaaaaattttgtttctgtttaactgtcactttcaaaggtcaatgcaacattaaaagttgttttatcaata 14061304  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||   |||||||| |||||||| || | ||||||| | |||    ||||||||||| ||  | |||| | | ||||| |||| ||||| |||||||||||    
T  14061303 ttgcccttagttatttattacagagagagaaataaataaaatgtaatattaaatgactaaagctattatagtaaaagtataaattattgtatcaaaagta 14061204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 449
Target Start/End: Complemental strand, 38483010 - 38482847
Alignment:
Q  293 ttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattattacatagggcgaaataat 385  Q
    ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| |||||||| ||||| |  || | ||||||      
T  38483010 ttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttatttattgcggagagagaaatata 38482911  T
Q  386 tgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  38482910 tgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagta 38482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 8554273 - 8554182
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||||| ||||||||  ||||||||  ||||||| |||||||      |||||||||||| ||||||||||    
T  8554273 tccctccgttcctttttaagtgtctctcttgtagaatttttttgttcttatttaagtgtcactttacatagttcaatgcaacattaaatgtt 8554182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 446
Target Start/End: Complemental strand, 15623801 - 15623669
Alignment:
Q  317 aagttcaatgcaatattaaatg---ttttatcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggtt 413  Q
    ||||||||||||||||||||||   ||||||||||||||  |||| ||| ||||| |  || | ||||||  ||||| |||||||||||||||||  ||     
T  15623801 aagttcaatgcaatattaaatgatgttttatcaatattacccttaattatttattgcggagagagaaatatatgaaataagatattaaatgaataatgtc 15623702  T
Q  414 atttttggaaaaggataatttattatatcaaaa 446  Q
    ||| | | ||||| |||| |||||| |||||||    
T  15623701 attatagtaaaagtataacttattacatcaaaa 15623669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 446
Target Start/End: Complemental strand, 15647589 - 15647457
Alignment:
Q  317 aagttcaatgcaatattaaatg---ttttatcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggtt 413  Q
    ||||||||||||||||||||||   ||||||||||||||  |||| ||| ||||| |  || | ||||||  ||||| |||||||||||||||||  ||     
T  15647589 aagttcaatgcaatattaaatgatgttttatcaatattacccttaattatttattgcggagagagaaatatatgaaataagatattaaatgaataatgtc 15647490  T
Q  414 atttttggaaaaggataatttattatatcaaaa 446  Q
    ||| | | ||||| |||| |||||| |||||||    
T  15647489 attatagtaaaagtataacttattacatcaaaa 15647457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 25703834 - 25703713
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||  ||||||| ||||||||||| ||    | ||||||||||||  ||||||||   ||||| ||    
T  25703834 tccctccgttcctttttaagtgtcacttttgaagaaatattttgttcctatttaactggcattttcaaagttcaatgcagcattaaatgttattttacca 25703735  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  25703734 atattgtccttagttatttatt 25703713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 25813005 - 25812884
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||  ||||||| ||||||||||| ||    | ||||||||||||  ||||||   ||||||| ||    
T  25813005 tccctccgttcctttttaagtgtcacttttgaagaaatattttgttcctatttaactggcattttcaaagttcaatgcagcattaaatgttgttttacca 25812906  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  25812905 atattgtccttagttatttatt 25812884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 33314534 - 33314617
Alignment:
Q  262 ttcctttttaagtgtctctttt-gtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||||| |||||| | ||||| |||||||||| |||| |||||||||    ||||||||||||| ||||||||||    
T  33314534 ttcctttttaagtgtttctttttgaagaaattttttgtttccatttgactgtcactttcaaagttcaatgcaacattaaatgtt 33314617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 35052036 - 35052157
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||  |||| |||||| ||||||  ||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  35052036 tccctccgttcctttttatttgtcacttttggagaaaaaatttgttcatatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 35052135  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||| ||| |||||    
T  35052136 atattatccttatttatttatt 35052157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 40604108 - 40603987
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| |||||||||||||||| ||  || | |||| ||||||| ||||||||||||||    | ||||||||||||| ||||||||   ||||| ||    
T  40604108 tccctccgttcctttttaagtgtcactgatggataaaaattttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttattttacca 40604009  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||| ||| |||||    
T  40604008 atattatccttaattatttatt 40603987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 340
Target Start/End: Complemental strand, 43553709 - 43553618
Alignment:
Q  253 ttccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||| ||| ||||||||||||||||||||||  ||||  |||||||| ||||| ||||||||||    ||||| ||||||| ||||||||||    
T  43553709 ttccttccgttcctttttaagtgtctcttttagagaatttttttgttcctattaaactgtcactttcgaagttaaatgcaacattaaatgtt 43553618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 7483735 - 7483817
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||||||  ||||| ||||| |||||||| |||||| |||||||||    ||||||||||||| | ||||||||    
T  7483735 ttcctttttaagtgtcatttttggagaaattttttgttcctatttcactgtcactttcaaagttcaatgcaacaataaatgtt 7483817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 340
Target Start/End: Original strand, 8672281 - 8672375
Alignment:
Q  250 gtattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| || |||||||| |||| |||||  | ||||  ||||| |||||||||||||||||    ||||||||||||| ||||||||||    
T  8672281 gtattccctccgtttctttttaattgtcacttttagaaaaaaaatttgtatctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 8672375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 13173920 - 13174002
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| ||||   ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||||||    
T  13173920 ttcctttttaagtgtcactttaagagaaagtttttgttcctatttaactgtcacttttaaagttcaatgcaacaataaatgtt 13174002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 26062694 - 26062851
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa--atgttttatcaatat 350  Q
    |||| ||||||||||||||||  ||||  | ||  |||||||| ||||||||||||||||    ||||||||||||| |||||   ||||||| ||||||    
T  26062694 ctccgttcctttttaagtgtcatttttagaaaatttttttgttcctatttaactgtcactttcgaagttcaatgcaacattaatgttgttttaccaatat 26062793  T
Q  351 tattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    | | |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  26062794 tgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 26062851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 368
Target Start/End: Original strand, 40228303 - 40228399
Alignment:
Q  279 cttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaattatt 368  Q
    |||||| ||||||  |||||| ||||||||||||||||    |||||||||| || ||||||||||   ||| |||||||||||||||||| |||||    
T  40228303 cttttggagaaaaaatttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgttttaccaatattattcttagttatttatt 40228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 340
Target Start/End: Original strand, 31028670 - 31028727
Alignment:
Q  287 gaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||| |||||||||||||||    ||||||||||||| ||||||||||    
T  31028670 gaaaatttttgtttttatttaactgtcactttaaaagttcaatgcaacattaaatgtt 31028727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 35498289 - 35498203
Alignment:
Q  292 tttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatcaatattattcttagttaattattaca 371  Q
    |||||||||||||||||||||||||    ||||| ||||||| |||| ||   |||||||||||||| | |||||||| ||||||||    
T  35498289 tttttgtttctatttaactgtcacttttaaagtttaatgcaacattagatgtagttttatcaatattgtccttagttatttattaca 35498203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 45281635 - 45281513
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtag-aaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatc 345  Q
    ||||||| ||| |||||||||||| |||||| || ||||  ||| || ||||||||||||||||    ||||||||||||| ||||||   ||||||  |    
T  45281635 tccctccattcttttttaagtgtcacttttggagaaaaaaatttcttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttgcc 45281536  T
Q  346 aatattattcttagttaattatt 368  Q
    |||||||| |||||||| |||||    
T  45281535 aatattatccttagttatttatt 45281513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 4057310 - 4057361
Alignment:
Q  293 ttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||    ||||||||||||||||||||||||    
T  4057310 ttttgttcctatttaactgtcactttcaaagttcaatgcaatattaaatgtt 4057361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 340
Target Start/End: Complemental strand, 8954945 - 8954866
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||| ||||  ||||||||||  |||||||||||| |||||||| |||    ||||||||| ||||||||||||||    
T  8954945 ctttttaattgtcatttttgtagaatttttttgtttctaattaactgttactttcaaagttcaatacaatattaaatgtt 8954866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 17074837 - 17074777
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| |||||||||| ||||||||||||||| || |||||||| |||||||| |||||||    
T  17074837 tccctccgttccttttta-gtgtctcttttgtag-aattttttgttcctatttaaatgtcact 17074777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 17573433 - 17573493
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| |||||||||| ||||||||||||||| || |||||||| |||||||| |||||||    
T  17573433 tccctccgttccttttta-gtgtctcttttgtag-aattttttgttcctatttaaatgtcact 17573493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 2943997 - 2944034
Alignment:
Q  435 attatatcaaaagtaatactccctccgtccctaattat 472  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  2943997 attatataaaaaataatactccctccgtccctaattat 2944034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 11163257 - 11163339
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||| | ||  |||||||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  11163257 ttcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 11163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 449
Target Start/End: Complemental strand, 43642208 - 43642044
Alignment:
Q  292 tttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattattcttagttaattattacatagggcgaaataa 384  Q
    ||||| || ||||||||||||||||    ||||||||||||| ||||||||   ||||| ||||||||| |||||||| ||||| |   | | ||||||     
T  43642208 tttttcttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttattttaccaatattatccttagttatttattgcggggagagaaatat 43642109  T
Q  385 ttgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
     |||||  |||| ||||| ||||| ||| ||| | | ||||| ||||||||||  ||||||||||    
T  43642108 atgaaattagatgttaaaagaataaggtcattatagtaaaagtataatttattgcatcaaaagta 43642044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 6e-32; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 11222576 - 11222415
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  11222576 tccctccgttcctttttaagtgtctcttttgaagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 11222477  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| ||||| || || | ||||||  |||||  ||||||||||||||||    
T  11222476 atattatccttagttatttattgcagagagagaaatatatgaaatgagatattaaatgaata 11222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 368
Target Start/End: Complemental strand, 36405090 - 36404981
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattattctta 358  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    ||||||||||||||||||||||   ||||| ||||||||| ||||    
T  36405090 tttttaagtgtctcttttgaagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaatattaaatgttattttaccaatattatcctta 36404991  T
Q  359 gttaattatt 368  Q
    |||| |||||    
T  36404990 gttatttatt 36404981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 479234 - 479031
Alignment:
Q  254 tccctcctttccttttt-aagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatc 345  Q
    ||||||| ||||||||| ||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   |||||||||    
T  479234 tccctccgttccttttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatc 479135  T
Q  346 aatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaa 445  Q
    |||||||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||    
T  479134 aatattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaa 479035  T
Q  446 agta 449  Q
    ||||    
T  479034 agta 479031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 408
Target Start/End: Original strand, 37093435 - 37093594
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||| ||||||||||   ||||||||||||    
T  37093435 cctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatacaatattaaatgttgttttatcaat 37093534  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||| | |||||||| ||||| || |  | ||||||  |||||  ||||||||||||||||    
T  37093535 attgtccttagttatttattgcagaaagagaaatatatgaaatgagatattaaatgaata 37093594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 10812182 - 10812343
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  10812182 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 10812281  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||| ||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  10812282 atattatccttaattatttattgcggagagagaaatatatgaaatgagatattaaatgaata 10812343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 25558443 - 25558323
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||    ||||| ||||||| ||||||   ||||||||||    
T  25558443 tccctccgtttctttttaagtgtcacttttggagaaaatttttgtttctatttaactgtcactttcaaagtt-aatgcaacattaaatgttgttttatca 25558345  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  25558344 atattatccttagttatttatt 25558323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 449
Target Start/End: Original strand, 4883601 - 4883788
Alignment:
Q  269 ttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattattcttagtt 361  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||    | ||||||||||||| ||||||   ||||||| |||||||||  ||||||    
T  4883601 ttaagtgtctcttttgaagaaattttttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattatctttagtt 4883700  T
Q  362 aattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    | ||||| || || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| | || |||||| ||||||||||    
T  4883701 atttattgcagagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattacatcaaaagta 4883788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 14296017 - 14295815
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||| ||| ||||||   ||||||| ||    
T  14296017 tccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgttttacca 14295918  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  | |||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  14295917 atattgtccttagttatttattgcgaagagagaaatatatgaaatgaaatattaaatgaataaggtcattatagtaaaagtataccttattgcatcaaaa 14295818  T
Q  447 gta 449  Q
    |||    
T  14295817 gta 14295815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 26342563 - 26342765
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||| ||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  26342563 tccctccgttcctttttaagtgtcacttttggagaaatttttggttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 26342662  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  26342663 atattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 26342762  T
Q  447 gta 449  Q
    |||    
T  26342763 gta 26342765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 34399185 - 34399387
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||| || |||||||||  |||||    ||||||||||||| ||||||   ||||||| ||    
T  34399185 tccctccgttcctttttaagtgtcacttttggagaaattttttattcctatttaaccatcactttcaaagttcaatgcaacattaaatattgttttacca 34399284  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| ||| ||||||  |||||||    
T  34399285 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaa 34399384  T
Q  447 gta 449  Q
    |||    
T  34399385 gta 34399387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 28145830 - 28145711
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| ||||||||||| || ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  28145830 cctccgttcctttttaagtgtcacttttggagaaaatttttcttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaat 28145731  T
Q  349 attattcttagttaattatt 368  Q
    ||| | |||||||| |||||    
T  28145730 attgtccttagttatttatt 28145711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 11560307 - 11560186
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||| |||||||||  ||||| |||||||||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  11560307 tccctccgtttcttcttaagtgtcagttttggagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 11560208  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  11560207 atattgtccttagttatttatt 11560186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 13753946 - 13754059
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||    ||||||||| ||| ||||||   ||||||||||||||||      
T  13753946 ttcctttttaagtgtctcttttggagaacatttttgttccaatttaactgtcactttcaaagttcaatacaacattaaatgttgttttatcaatattacc 13754045  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  13754046 cttagttatttatt 13754059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 14541314 - 14541435
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||||| |||||| | ||||||| ||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  14541314 tccctccgttcctttttaaatgtcacttttggagaaaaatattgtttcaatttaactgtcactttcaaagttcaatgcaacattaaacgttgttttacca 14541413  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  14541414 atattatccttagttatttatt 14541435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 15183253 - 15183100
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||  ||||| ||||||||||||||||| |||||||    ||||||||||||| ||||||   ||||||| ||||||| |     
T  15183253 ttcctttttaagtgtcactttttgagaaattttttgtttctatttaattgtcactttcgaagttcaatgcaacattaaatgttgttttaccaatattgtc 15183154  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  15183153 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 15183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 41885608 - 41885729
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| |||||||||| ||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||||   ||||| ||    
T  41885608 tccctccgttcctttttaggtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttattttacca 41885707  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  41885708 atattgtccttagttatttatt 41885729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 35158603 - 35158521
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    || |||||||||||||||||||||    
T  35158603 ttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactgtcactttcgaaattcaatgcaatattaaatgtt 35158521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 362
Target Start/End: Original strand, 34357161 - 34357276
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||||  |||||| |||||||| |||||||    ||||||||||||| ||||||   ||||||| ||    
T  34357161 tccctccgttcctttttaagtgtcacttttggagaaaaaatttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttacca 34357260  T
Q  347 atattattcttagtta 362  Q
    ||||||| ||||||||    
T  34357261 atattatccttagtta 34357276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 44360417 - 44360520
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatca 346  Q
    ||||||| |||||||||||  |||||||||| ||||  |||||||||||||||||||||||||    ||||||||||||| |||||   |||||||||||    
T  44360417 tccctccgttcctttttaatcgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatca 44360516  T
Q  347 atat 350  Q
    ||||    
T  44360517 atat 44360520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 266 - 449
Target Start/End: Complemental strand, 15677539 - 15677349
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||  ||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   | ||||||||||||||| ||||    
T  15677539 tttttaagtgtcatttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattattttatcaatattatcctta 15677440  T
Q  359 gttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| ||||| |  || | ||||||  |||||   ||||||||||||||| ||| ||| |   ||||| |||| |||||  ||||||||||    
T  15677439 gttatttattgcggagagagaaatatatgaaatgtgatattaaatgaataaggtcattataataaaagtataacttattgcatcaaaagta 15677349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 15893840 - 15893638
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatca 346  Q
    ||||||| ||||||||||||||||  ||||| | || |  |||||| |||||||||||||| |    ||||||||||||| ||||||||||   ||| ||    
T  15893840 tccctccgttcctttttaagtgtcaattttggaaaataaatttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttacca 15893741  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||||||| | | ||||| |||  |||||  |||||||    
T  15893740 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggttattatagtaaaagtatagcttattgcatcaaaa 15893641  T
Q  447 gta 449  Q
    |||    
T  15893640 gta 15893638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 38072478 - 38072325
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||| ||||||| |||||| ||||| ||||||||||||||||||||||| |    ||||||||||||| ||||||   ||||||| ||||||| |     
T  38072478 ttccttttcaagtgtcacttttggagaaattttttgtttctatttaactgtcatttttgaagttcaatgcaacattaaatgttgttttaccaatattgtc 38072379  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
     ||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  38072378 tttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 38072325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 1395547 - 1395668
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaattttt-gtttctatttaactgtcact----aagttcaatgcaatattaaatg--ttttatca 346  Q
    ||||||| |||||||||||||||| | |||||||||| ||||| ||| ||||||||||||||||    ||||||||||||| | ||||||  ||||| ||    
T  1395547 tccctccgttcctttttaagtgtcacatttgtagaaattttttcgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttttttacca 1395646  T
Q  347 atattattcttagttaattatt 368  Q
    | ||||  ||||||||||||||    
T  1395647 acattacccttagttaattatt 1395668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 4654702 - 4654822
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||| ||| |||||| ||||| ||||| |||| ||||||||||||||||||||    ||||||||||||| ||||||   | ||||| ||    
T  4654702 tccctccgttccttcttacgtgtcttttttgaagaaatttttcgtttctatttaactgtcacttgcaaagttcaatgcaacattaaatattattttacca 4654801  T
Q  347 atattattcttagttaattat 367  Q
    ||||||| |||||||| ||||    
T  4654802 atattatccttagttatttat 4654822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 14288414 - 14288474
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca 314  Q
    ||||||| || ||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  14288414 tccctccgtttctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtca 14288474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 19594334 - 19594494
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact---aagttcaatgcaatattaaa---tgttttatcaa 347  Q
    ||||||| ||||||||||| |||| |||||  ||||| |||||||| ||||||||||||||||   || |||||||||| ||||||   ||||||| |||    
T  19594334 tccctccgttcctttttaattgtcactttttgagaaattttttgttcctatttaactgtcactttcaaattcaatgcaacattaaatgttgttttaccaa 19594433  T
Q  348 tattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| | | |||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  19594434 tattgtccatagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 19594494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 9369968 - 9370062
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatcaatatta 352  Q
    |||||||| ||||  ||||| ||||| |||||||||||||||||||||||||    |||||||||||||||||||    ||||||||||||||||    
T  9369968 ctttttaattgtcatttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaatattaagtgttgttttatcaatatta 9370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 449
Target Start/End: Complemental strand, 30264854 - 30264660
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| |||||| |||||||  |||||||||||||    | ||||||||| ||| ||||||   ||||||| ||||||| |     
T  30264854 ttcctttttaagtgtcacttttggagaaaaattttgttcttatttaactgtcattttcaaagttcaatacaacattaaatgttgttttaccaatattgtc 30264755  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| ||||| |  || | ||||||  |||||  | |||||||||||||| ||| ||| | | ||||| ||| ||||||  ||||||||||    
T  30264754 cttagttatttattgcggagagagaaatatatgaaatgaaatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagta 30264660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 31025200 - 31025078
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  ||| | ||||| |||||||||||||||||||||||||    ||||||||||||| | ||||   ||||||| ||    
T  31025200 tccctccgttcctttttaagtgtcattttgggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatcttgttttacca 31025101  T
Q  347 atattattcttagttaattatta 369  Q
    | ||||  |||||||| ||||||    
T  31025100 acattacccttagttatttatta 31025078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 271 - 449
Target Start/End: Original strand, 3363584 - 3363769
Alignment:
Q  271 aagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaa 363  Q
    ||||||| |||||| |||||| |||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| ||||||||     
T  3363584 aagtgtcacttttggagaaaagttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttat 3363683  T
Q  364 ttattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||||| |  || | ||||||  |||||  ||||||||||| |||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  3363684 ttattgcggagagagaaatatatgaaatgagatattaaatcaataaggtcattatagtaaaagtatagcttattgcatcaaaagta 3363769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 13965590 - 13965711
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatca 346  Q
    ||||||| || |||||||| ||||||||||| ||||| ||||||||  ||||||||||| |||    ||||||||||||| |||||||||   | || ||    
T  13965590 tccctccattactttttaaatgtctcttttggagaaattttttgttcatatttaactgttacttttaaagttcaatgcaacattaaatgttgatatacca 13965689  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  13965690 atattatccttagttatttatt 13965711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 43077283 - 43077362
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat 337  Q
    ||||||||||| |||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| |||||||    
T  43077283 ttcctttttaattgtcacttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaat 43077362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 2012852 - 2012934
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||||||    
T  2012852 ttcctttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgtt 2012934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 36375562 - 36375717
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattatt 354  Q
    ||||||||||||||||  ||||| |||||| ||||||| |||||| |||||||||    ||||||||||||| ||||||||||   ||||||||| ||||    
T  36375562 ttcctttttaagtgtcatttttggagaaaaattttgttcctatttgactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatagtatt 36375661  T
Q  355 --cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
      ||| |||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  36375662 atcttggttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 36375717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 416
Target Start/End: Original strand, 13215386 - 13215545
Alignment:
Q  264 cctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattct 356  Q
    ||||||||||||||||||||  ||||   ||||||| ||||||||||||||||    |||||||||| || ||||||   ||||||| ||||||||| ||    
T  13215386 cctttttaagtgtctcttttagagaattattttgttcctatttaactgtcactttcgaagttcaatgtaacattaaatgttgttttaccaatattatcct 13215485  T
Q  357 tagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    || ||| |||||||  || | ||||||  |||||  |||| |||||| |||| |||||||    
T  13215486 tacttatttattacggagagagaaatatatgaaattagattttaaattaatagggttatt 13215545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 37660124 - 37660217
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||| ||||| ||| ||||||| |||| |||||| ||||| |||||||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  37660124 tattacctccgttcatttttaattgtcacttttgcagaaattttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 37660217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 30544514 - 30544593
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||| |||| |||||| | ||| |||||||||||| ||||||||||||    ||||||||||||| ||||||||||    
T  30544514 ctttttaattgtcacttttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgtt 30544593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 32674194 - 32674299
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| | |||||||  |||||    |||||||||||||  |||||   ||||||||||    
T  32674194 tccctccgttcctttttaagtgtcacttttggagaaattttttgttccaatttaacaatcactttcaaagttcaatgcaactttaaatgttgttttatca 32674293  T
Q  347 atatta 352  Q
    ||||||    
T  32674294 atatta 32674299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 25187355 - 25187297
Alignment:
Q  286 agaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| |||||||| ||||||||||||||||    ||||||||||||||||||||||||    
T  25187355 agaaattttttgttcctatttaactgtcactttcaaagttcaatgcaatattaaatgtt 25187297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 32855040 - 32854950
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||| ||| ||| |||| |||||  ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  32855040 tccctccgttcatttataattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 32854950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 34309301 - 34309220
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||||| ||||  ||||| || ||||||||||||||||    ||||||||||||| ||||||||||    
T  34309301 ttcctttttaagtgtcacttttgaagaattttttt-ttcctatttaactgtcactttcgaagttcaatgcaacattaaatgtt 34309220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 18904146 - 18904081
Alignment:
Q  279 cttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| ||||||||||||||||||| ||||||||||||    |||||||||| || ||||||||||    
T  18904146 cttttatagaaaatttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgtt 18904081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 928291 - 928232
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtc 313  Q
    ||||||| ||||||| ||| |||| |||||| | |||||||||||||||| |||||||||    
T  928291 tccctccgttcctttataattgtcacttttgcataaaatttttgtttctaattaactgtc 928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 369
Target Start/End: Original strand, 9706783 - 9706892
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||  ||||| |||||| ||| ||||  ||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| ||||    
T  9706783 tttttaagtgtcatttttgaagaaaaattt-gttttaatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatattatcctta 9706881  T
Q  359 gttaattatta 369  Q
    |||| ||||||    
T  9706882 gttatttatta 9706892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 449
Target Start/End: Original strand, 10263780 - 10263942
Alignment:
Q  295 ttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaatt-attacatagggcgaaataatt 386  Q
    ||||| ||||||||||||||||    || |||||||||||||||||||||   ||| ||||||||| ||||||| ||| ||| |  || | ||||||  |    
T  10263780 ttgttcctatttaactgtcactttcaaatttcaatgcaatattaaatgttgttttaccaatattatccttagtttatttattgcggagagagaaatatat 10263879  T
Q  387 gaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||||  |||||||||||||||| ||| ||| | | ||||| ||| ||||||  ||||||||||    
T  10263880 gaaatgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagta 10263942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 316
Target Start/End: Complemental strand, 28301744 - 28301697
Alignment:
Q  269 ttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    |||||||||||||||| |||||| ||||||||| |||||| |||||||    
T  28301744 ttaagtgtctcttttgaagaaaaattttgtttcaatttaaatgtcact 28301697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 13849975 - 13849870
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || |||||||| |||| |||||  ||||| ||||||||  |||||||||||||||    ||||||||||||  ||||||   ||||||||||    
T  13849975 tccctccgtttctttttaattgtcacttttaaagaaattttttgttcttatttaactgtcactttcaaagttcaatgcatcattaaatgttgttttatca 13849876  T
Q  347 atatta 352  Q
    ||||||    
T  13849875 atatta 13849870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 34884790 - 34884693
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatatta 352  Q
    ||||||||||| |||| |||||  ||||| |||||||| |||||||||| |||||    ||||||| ||||| ||||||   ||||||||||||||||    
T  34884790 ttcctttttaactgtcacttttagagaaattttttgttcctatttaactttcacttttaaagttcattgcaacattaaatgttgttttatcaatatta 34884693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 370
Target Start/End: Complemental strand, 37116815 - 37116730
Alignment:
Q  292 tttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattcttagttaattattac 370  Q
    ||||||| |||||||||||||||||    ||||||||||||| ||||||   |||||||||||| |||  ||||| ||||||||||    
T  37116815 tttttgtatctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatcttacccttagataattattac 37116730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 449
Target Start/End: Complemental strand, 13001169 - 13000969
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||| || ||||||||  |||||| ||||| |||||||| | ||||||||||||||    |||||||||||||  |||||   |||||||||| |    
T  13001169 cctccgttcgttcttaagtgttacttttggagaaattttttgttccaatttaactgtcactttcaaagttcaatgcaactttaaatcttgttttatcagt 13001070  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    ||||  |||||||| ||||| |  || | ||||||  |||||  ||||||||||| |||| || |||| | | ||||  || | ||||| ||||||||||    
T  13001069 attacccttagttatttattgcggagagagaaatatatgaaatgagatattaaataaataaggctattatagcaaaaatattaattattgtatcaaaagt 13000970  T
Q  449 a 449  Q
    |    
T  13000969 a 13000969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 42796236 - 42796203
Alignment:
Q  274 tgtctcttttgtagaaaatttttgtttctattta 307  Q
    |||||||||||||||||| |||||||||||||||    
T  42796236 tgtctcttttgtagaaaacttttgtttctattta 42796203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 9e-28; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 262 - 449
Target Start/End: Complemental strand, 7477450 - 7477256
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||    ||||||||||||||||||||   ||||||| | |||||||     
T  7477450 ttcctttttaagtgtctcttttgaagaaaatttttgttcctatttaactgttactttcaaagttcaatgcaatattaaatgttgttttaccgatattatc 7477351  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| |||||||  || | ||||||  |||||  ||||||||||| |||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  7477350 cttagttatttattacgaagagagaaatatatgaaatgagatattaaattaataaggtcattatagtaaaagtataacttattgcatcaaaagta 7477256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 22951070 - 22950917
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatcaatattatt 354  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    || |||||||||| |||||||   |||||| ||||||| |     
T  22951070 ttcctttttaagtgtcacttttgaagaaaatttttgtttctatttaactgtcactttcaaaattcaatgcaacattaaatgtagttttaccaatattctc 22950971  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| |||||||| || | ||||||  |||||  ||||||||||||||||    
T  22950970 cttagttatttattacagagagagaaatatatgaaatgagatattaaatgaata 22950917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 416
Target Start/End: Original strand, 31430542 - 31430711
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  31430542 tccctccgttcctttttaagtgtcacttttgtagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 31430641  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| |||||||    
T  31430642 atattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggttatt 31430711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 452
Target Start/End: Complemental strand, 12838338 - 12838133
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    ||||||| ||||| ||||||   ||||||  ||    
T  12838338 tccctccgttcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcactttcaaagttcagtgcaacattaaatgttgttttgcca 12838239  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||| |||| ||||||| | | ||| | |||  ||||| ||||||||    
T  12838238 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaataaataaggttattatagtaaaggtatagcttattgtatcaaaa 12838139  T
Q  447 gtaata 452  Q
    ||||||    
T  12838138 gtaata 12838133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 17896783 - 17896622
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||||||||||   ||||||| ||    
T  17896783 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaatattaaatgttgttttacca 17896684  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||| | |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  17896683 atattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 17896622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 33173798 - 33173951
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  33173798 ttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 33173897  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| || || | ||||||  |||||  |||| |||||||||||    
T  33173898 cttagttatttattgcagagagagaaatatatgaaatgagattttaaatgaata 33173951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 26723907 - 26724109
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||||||||||||||||||||| | ||||  |||||||||||||||||||||||||    || |||||||||| ||||||||   ||||||||    
T  26723907 tccctccattcctttttaagtgtctctttcggagaatttttttgtttctatttaactgtcactttcaaaattcaatgcaacattaaatgatattttatca 26724006  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||  |||| ||| |||||    || | ||||||  ||||| ||||||||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  26724007 atattacccttaattatttattgtggagagagaaatatatgaaataagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 26724106  T
Q  447 gta 449  Q
    |||    
T  26724107 gta 26724109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 3310199 - 3310320
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatatta---aatgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| |||   ||||||||| |||||||||||||||    ||||||||||||| ||||   ||||||||||||    
T  3310199 tccctccgttcctttttaagtgtctcttttggagattttttttgtttttatttaactgtcacttctaaagttcaatgcaacattaaataatgttttatca 3310298  T
Q  347 atattattcttagttaattatt 368  Q
    |||||| ||||||||| |||||    
T  3310299 atattactcttagttatttatt 3310320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 18470290 - 18470451
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  18470290 tccctccgttcctttttaagtgtcacttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 18470389  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  18470390 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 18470451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 449
Target Start/End: Complemental strand, 33922022 - 33921832
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||||    ||||||||||||| ||| ||   ||||||| | ||||||| ||||    
T  33922022 tttttaagtgtctcttttgaagaaaatttgtgttcctatttaactgtcactttcaaagttcaatgcaacattgaatgttgttttaccgatattatcctta 33921923  T
Q  359 gttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
     ||| |||||||  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||  ||||||||||  ||||||||||    
T  33921922 attatttattacgaagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaaatataatttattgcatcaaaagta 33921832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 20035039 - 20035192
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||| ||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  20035039 ttcctttttaagtgtcacttttgcagaaattttttgttcctatttaactggcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 20035138  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  20035139 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 20035192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 20045450 - 20045603
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||| ||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  20045450 ttcctttttaagtgtcacttttgcagaaattttttgttcctatttaactggcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 20045549  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  20045550 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 20045603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 32966309 - 32966148
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatgt---tttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||| || ||||||||||||||    | ||||| ||||||| |||||||||   |||| ||    
T  32966309 tccctccgttcctttttaagtgtcacttttggagaaattttttattcctatttaactgtcattttcaaagttaaatgcaacattaaatgttggtttacca 32966210  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||| | |||||||| |||||||| || | ||||||  |||||  ||||||||||||||||    
T  32966209 atattgtccttagttatttattacagagagagaaatatatgaaatgagatattaaatgaata 32966148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 36922230 - 36922343
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||  ||||||||||| |||||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  36922230 ttcctttttaagtgtcacttttagagaaaatttttatttctatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatattatc 36922329  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  36922330 cttagttatttatt 36922343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 44480402 - 44480281
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||||  ||||||  |||||||| ||||||    ||||||||||||| ||||||||   ||||||||    
T  44480402 tccctccgttcctttttaagtgtctcttttgaagaaaaaatttgttcttatttaaccgtcacttttaaagttcaatgcaacattaaatgttattttatca 44480303  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  44480302 atattatccttagttatttatt 44480281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 1553498 - 1553622
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||  |||||||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  1553498 tccctccgttcctttttaatcgtctcttttggagaaattttttgttcctatttaactgtcactttcgaagttcaatgcaacattaaatattgttttacca 1553597  T
Q  347 atattattcttagttaattattaca 371  Q
    ||||||| |||| ||| ||||||||    
T  1553598 atattatccttacttatttattaca 1553622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 462
Target Start/End: Complemental strand, 41889566 - 41889362
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatcaatattattctt 357  Q
    ||||||||||||| |||||  ||||  |||||||| | |||||||||||| |    |||||||||||||  ||||||   ||||||||||||||||||||    
T  41889566 ctttttaagtgtcacttttaaagaatttttttgttccaatttaactgtcatttttaaagttcaatgcaactttaaatattgttttatcaatattattctt 41889467  T
Q  358 agttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagtaatactccc 457  Q
    ||||| ||||| |  || | ||||||  |||||  |||||||||||||||| |  |||| | | ||||| || | ||||| ||||||||||| |||||||    
T  41889466 agttatttattgcgaagagagaaatatatgaaatgagatattaaatgaataagactattatagtaaaagtatcaattattgtatcaaaagtagtactccc 41889367  T
Q  458 tccgt 462  Q
    |||||    
T  41889366 tccgt 41889362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 10227247 - 10227441
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    || |||||||||  ||||||||   |||||||||||||||     
T  10227247 ttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaaattcaatgcatcattaaatgttattttatcaatattatc 10227346  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||| |||| ||||| |  |||| ||||||  | |||  |||| |||||| |||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  10227347 ctttgttatttattgcggagggagaaatatataaaatgagatgttaaattaataaggtcattatagtaaaagtataacttattgcatcaaaagta 10227441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 32528585 - 32528467
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||| |||||||||||  |||||| |||||||||||||| ||||||||||||||||    |||||||||| |||||||||   ||||||| |||||    
T  32528585 ctccgttcttttttaagtgttacttttgaagaaaatttttgttcctatttaactgtcactttcaaagttcaatgaaatattaaatgttgttttaccaata 32528486  T
Q  350 ttattcttagttaattatt 368  Q
    |||| |||||||| |||||    
T  32528485 ttatccttagttatttatt 32528467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 408
Target Start/End: Complemental strand, 36298423 - 36298273
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatcaatattattctt 357  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||    | ||||||||||| |||||   ||||||||||| |||||  |||    
T  36298423 ctttttaagtgtctcttttgaagaatttttttgtttctatttaactgtcactttcaatgttcaatgcaacattaaatgatgttttatcagtattaccctt 36298324  T
Q  358 agttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    | ||| ||||| |  || | ||||||  ||||| |||||||||||||||||    
T  36298323 aattatttatttcggagagagaaatatatgaaataagatattaaatgaata 36298273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 33100093 - 33099972
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  33100093 tccctccgttcttttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatcttgttttacca 33099994  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  33099993 atattgtccttagttatttatt 33099972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 35112412 - 35112533
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||||| ||||||||||||||    ||||||| ||||| ||||||   ||||||| ||    
T  35112412 tccctccgttcctttttaagtgtcacttttggagaaaaattttgtttcaatttaactgtcactttcaaagttcattgcaacattaaatattgttttacca 35112511  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||  |||||||| |||||    
T  35112512 atattacccttagttatttatt 35112533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 36339451 - 36339372
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat 337  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||    ||||| |||||||||||||||    
T  36339451 ttcctttttaagtgtctcttttgtagaaaagttttgtttttatttaagtgtcactttcaaagtttaatgcaatattaaat 36339372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 41675446 - 41675325
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||  | |||||||||||||    |||||||||| || ||||||   ||||||| ||    
T  41675446 tccctccgttcctttttaagtgtcacttttgcagaaaatttttgttcttgtttaactgtcactttcaaagttcaatgtaacattaaatgttgttttacca 41675347  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  41675346 atattatccttagttatttatt 41675325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 6799106 - 6799229
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||| ||||||||||||| ||||| ||||| ||||||||   ||||||||||||||    ||||||||||||| ||||||   ||||||||||    
T  6799106 tccctccattcatttttaagtgtctgttttggagaaattttttgttctcatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatca 6799205  T
Q  347 atattattcttagttaattattac 370  Q
    ||||||| |||| ||| |||||||    
T  6799206 atattatccttaattatttattac 6799229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 7312599 - 7312802
Alignment:
Q  254 tccctcctttcctttt-taagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatc 345  Q
    |||||||||||||||| |||||||| |||||| | ||| ||||| ||||||||||| |||||||    ||||||||||||| ||||||   ||||||| |    
T  7312599 tccctcctttccttttttaagtgtcacttttggataaattttttatttctatttaagtgtcactttcgaagttcaatgcaacattaaatgttgttttacc 7312698  T
Q  346 aatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaa 445  Q
    |||||| | |||||||| ||||| |  || | ||||||  |||||  ||||||||||| |||| ||| ||| | | ||||| |||| |||||  ||||||    
T  7312699 aatattgtccttagttatttattgcggagagagaaatatatgaaatgagatattaaataaataaggtcattatagtaaaagtataacttattgcatcaaa 7312798  T
Q  446 agta 449  Q
    ||||    
T  7312799 agta 7312802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 408
Target Start/End: Complemental strand, 26632428 - 26632279
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatattattctt 357  Q
    ||||||||||||| |||||| |||||||||||  | ||||||||||||||||    ||||||||||||| ||||||||   ||||| ||||||||| |||    
T  26632428 ctttttaagtgtcacttttggagaaaattttt-atcctatttaactgtcactttcaaagttcaatgcaacattaaatgttattttaccaatattatcctt 26632330  T
Q  358 agttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  26632329 agttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 26632279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 33257872 - 33258066
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| |||||| ||||||||| |||||||| |||||    ||||||||||||| ||||||   ||||||| ||||||||      
T  33257872 ttcctttttaagtgtcacttttggagaaaaattttgtttcaatttaactatcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacc 33257971  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    ||| |||| ||||||   || | ||||||  | |||  |||||||||||||||| ||||||| | | ||||| || |  |||| |||||||||||    
T  33257972 cttggttatttattatggagagagaaatatataaaatgagatattaaatgaataaggttattatagtaaaagtatgaagtattgtatcaaaagta 33258066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 29497786 - 29497633
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattatt 354  Q
    ||||| ||||| |||| |||||  |||||| |||| || ||||||||||||||||    ||||||||||||| ||||||||||   ||||||||||| ||    
T  29497786 ttcctatttaactgtcactttttgagaaaaattttattcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattgtt 29497687  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||| |||| ||||| |  || | ||||||  ||||| |||||||||||||||||    
T  29497686 cttcgttatttattgcggagagagaaatatatgaaataagatattaaatgaata 29497633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 45324008 - 45324069
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgt 312  Q
    |||||||||| |||||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  45324008 tattccctccgttccttttcaagtgtctcttttggagaatttttttgtttctatttaactgt 45324069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 2408913 - 2408817
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt--tttatcaatatta 352  Q
    |||||||||||||||| |||||| ||||||  ||||||  |||||||||||||||    ||||||||||||| |||||||||  |||||||||||||    
T  2408913 ttcctttttaagtgtcacttttggagaaaaaatttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttatcaatatta 2408817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 42880962 - 42881065
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcac----taagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||| ||||    |||| ||||||||| ||||||   ||||||||||||||||| |||     
T  42880962 tttttaagtgttttttttggagaaaatttttgtttctatttaactatcactttttaaggtcaatgcaacattaaatgttgttttatcaatattatccttg 42881061  T
Q  359 gtta 362  Q
    ||||    
T  42881062 gtta 42881065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 405
Target Start/End: Complemental strand, 30866996 - 30866838
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatca 346  Q
    ||||||| ||| ||||||||||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | |||||||   |||| ||    
T  30866996 tccctccgttcttttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttggtttacca 30866897  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    | ||||  |||||||| |||||||  || | ||||||  | ||| ||||||||||||||    
T  30866896 acattacccttagttatttattacggagagagaaatatataaaataagatattaaatga 30866838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 8264938 - 8264992
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    |||||||||||||||| |||||  |||||||||||||| ||||||||||||||||    
T  8264938 ttcctttttaagtgtcacttttagagaaaatttttgttcctatttaactgtcact 8264992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 8966160 - 8966074
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa 336  Q
    ||||||| ||||||||||| |||| |||||| | |||| ||||||||||| ||||||||||||    ||||||||||||| ||||||    
T  8966160 tccctccgttcctttttaattgtcacttttgcataaaaattttgtttctaattaactgtcactttcaaagttcaatgcaacattaaa 8966074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 35746904 - 35746814
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| | ||||||||| |||| |||||| ||||||||||| ||||||||||| |||||||    ||||||||| ||| ||||||||||    
T  35746904 tccctccgtacctttttaattgtcacttttggagaaaatttttatttctatttaaatgtcactttcaaagttcaatacaacattaaatgtt 35746814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 47408121 - 47408178
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactg 311  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| |||||||||||    
T  47408121 tccctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactg 47408178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 452
Target Start/End: Complemental strand, 22057609 - 22057465
Alignment:
Q  317 aagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaattattacatagggcga------aataattgaaacaagatattaaatgaat 407  Q
    ||||||||||||||||||||||||   ||| ||||||||  |||||||| |||||||| || | ||      ||||  ||||||||||||||||||||||    
T  22057609 aagttcaatgcaatattaaatgttgttttagcaatattacccttagttatttattacagagagagagagagaaatatatgaaacaagatattaaatgaat 22057510  T
Q  408 atggttatttttggaaaaggataatttattatatcaaaagtaata 452  Q
      || |||| ||| |||| || || ||||| ||||||||||||||    
T  22057509 gaggctattattgaaaaatgacaaattattgtatcaaaagtaata 22057465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 31399191 - 31398990
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||| ||  ||||| ||||||  ||||||||| ||||| |||||||    ||||||||||||| ||||||   ||||||| ||    
T  31399191 tccctccattcctttttaagtatcatttttggagaaaaaatttgtttctttttaattgtcactttcaaagttcaatgcaacattaaatgttgttttacca 31399092  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    |||||||  ||||||| |||||    || |  |||||  |||||  ||||| |||||||||| ||| ||| | | ||||| ||| |||||||||||||||    
T  31399091 atattatctttagttatttattgaggagagataaatatatgaaatgagata-taaatgaataaggtcattatagtaaaagtatagtttattatatcaaaa 31398993  T
Q  447 gta 449  Q
    |||    
T  31398992 gta 31398990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 368
Target Start/End: Original strand, 3837857 - 3837966
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||| ||||||| ||||||  ||||||  |||||||||||||||    ||||| ||||||| ||||||   |||||||||||||||||  |||    
T  3837857 tttttaagtgtttcttttggagaaaaaatttgttcttatttaactgtcactttcaaagtttaatgcaacattaaatattgttttatcaatattatcttta 3837956  T
Q  359 gttaattatt 368  Q
    |||| |||||    
T  3837957 gttatttatt 3837966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 368
Target Start/End: Complemental strand, 36648221 - 36648144
Alignment:
Q  298 tttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatcaatattattcttagttaattatt 368  Q
    |||||||||||||||||||    |||||||||||||||||||||||   |||||||||||||| ||||| || |||||    
T  36648221 tttctatttaactgtcactttcaaagttcaatgcaatattaaatgttaatttatcaatattatccttagctatttatt 36648144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 42842118 - 42842021
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatatta 352  Q
    ||||||||||| |||| |||||  ||||| |||||||| ||||||||||||||||    ||||||||||||  ||||||||   ||||||||||||||    
T  42842118 ttcctttttaattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttattttatcaatatta 42842021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 3177913 - 3178003
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| |||| |||||  ||||  |||||||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  3177913 tccctccgttcctttttaattgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 3178003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 28608578 - 28608668
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtc----actaagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||| ||||||||||||||||  ||||||||  ||||||| ||||    ||  |||||||||||| ||||||||||    
T  28608578 tccctccgttcctttttaaatgtctcttttgtagaatttttttgttcttatttaagtgtcctttacatagttcaatgcaacattaaatgtt 28608668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 27739533 - 27739565
Alignment:
Q  201 gcaggggcggagtcaggttttaaacattggggg 233  Q
    |||||||||||||||||||||||||||||||||    
T  27739533 gcaggggcggagtcaggttttaaacattggggg 27739565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 29722567 - 29722474
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||| |||||||||||  ||| |||||| ||||| ||||||||| || |||||| |||||     | |||||||||||||||||||||    
T  29722567 tattccctccattcctttttaatcgtcacttttggagaaattttttgtttatacttaactttcactttcataattcaatgcaatattaaatgtt 29722474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 46563381 - 46563321
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||| ||||||||||| |||| |||||| ||||| ||||||||| || ||||||||||||    
T  46563381 cctccgttcctttttaattgtcacttttgcagaaattttttgtttataattaactgtcact 46563321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 47459638 - 47459719
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaatgtttt 342  Q
    ||||||||||||| |||||| ||||| ||||||||  |||||||||||||    | ||||||||||||| ||||||| ||||    
T  47459638 ctttttaagtgtcacttttggagaaattttttgttcatatttaactgtcattttcgaagttcaatgcaacattaaatatttt 47459719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 36406733 - 36406792
Alignment:
Q  254 tccctcctttcctttt-taagtgtctcttttgtagaaaatttttgtttctatttaactgt 312  Q
    |||||||||||||||| |||||||| |||||| ||||| ||||||||  |||||||||||    
T  36406733 tccctcctttccttttttaagtgtcacttttgaagaaattttttgttcttatttaactgt 36406792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 403
Target Start/End: Complemental strand, 46286103 - 46285949
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||| ||||||| |||| |||||| ||||| ||||||||  |||||||||||||||    ||||||||||||| | ||||   ||||||| |||     
T  46286103 cctccgttcttttttaactgtcacttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaagaataaatattgttttaccaac 46286004  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaat 403  Q
    ||||  |||||||| ||||| | ||| | ||||||  ||||| || |||||||||    
T  46286003 attacccttagttatttattgcgtagagagaaatatatgaaataaaatattaaat 46285949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 35207887 - 35207833
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| ||| |||||||||||||||| |  |||| ||||||||||||||||||    
T  35207887 ttcctttctaaatgtctcttttgtagaataaatttgcttctatttaactgtcact 35207833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 37354111 - 37354057
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||    
T  37354111 ttcctttttaagtgtctcttttgaagaaattatttgatcatatttaactgtcact 37354057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 41891260 - 41891343
Alignment:
Q  262 ttcctttttaagtgtctcttttgtag-aaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||||||||||| |||||| || ||||  |||||| ||||||||||||||||    ||||||||||||| ||| ||||||    
T  41891260 ttcctttttaagtgtcacttttggagaaaaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacattgaatgtt 41891343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 340
Target Start/End: Complemental strand, 43874331 - 43874252
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||||| |||||  ||||  |||||||| ||||||||||||||||    || |||||||||| ||||||||||    
T  43874331 ctttttaagtgtcacttttagagaatttttttgttcctatttaactgtcactttcgaaattcaatgcaacattaaatgtt 43874252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 5732315 - 5732271
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgt 298  Q
    ||||||| |||||||||||| |||||||||| ||||| |||||||    
T  5732315 tccctccgttcctttttaagcgtctcttttgaagaaattttttgt 5732271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 449
Target Start/End: Complemental strand, 52649982 - 52649781
Alignment:
Q  255 ccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaa 347  Q
    |||||| ||||||||||| ||||  |||  ||||||| |||||||| ||||||| | |||||    |||||||| |||||||||||||||   ||| |||    
T  52649982 ccctccgttcctttttaaatgtccttttcatagaaaagttttgtttatatttaattatcactttcaaagttcaaagcaatattaaatgttgttttaccaa 52649883  T
Q  348 tattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaag 447  Q
    |||||  |||||||| |||||||| || | ||||||  ||||||||||||||||||||||  || |||| |||||||||||||  ||||| |||||||||    
T  52649882 tattacccttagttatttattacagagagtgaaatatatgaaacaagatattaaatgaatgaggctattattggaaaaggatatattattgtatcaaaag 52649783  T
Q  448 ta 449  Q
    ||    
T  52649782 ta 52649781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 50825826 - 50825624
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||  || ||||||||||||    ||||| ||||||||||||||   ||||||| ||    
T  50825826 tccctccgttcctttttaagtgtctcttttgaagaaattttttgttcttacttaactgtcactttcaaagtttaatgcaatattaaatgttgttttacca 50825727  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| |||||||  || | ||||||  |||||  |||| ||||||||||| ||| ||| | | ||||| |||| |||||  |||||||    
T  50825726 atattatccttagttatttattacggagagagaaatatatgaaatgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaa 50825627  T
Q  447 gta 449  Q
    |||    
T  50825626 gta 50825624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 368
Target Start/End: Original strand, 7782931 - 7783055
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgtttta 343  Q
    |||||||| | |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||||||||| |||| |   |||||||    
T  7782931 tattcccttcattcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattagatgttgtttta 7783030  T
Q  344 tcaatattattcttagttaattatt 368  Q
    |||||||| |||||||||| |||||    
T  7783031 tcaatattgttcttagttatttatt 7783055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 30686402 - 30686596
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||| |     
T  30686402 ttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtc 30686501  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  30686502 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 30686596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 35531549 - 35531347
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  35531549 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 35531450  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| || || |  |||||  ||||| | ||||| ||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  35531449 atattatccttagttatttattgcagagagataaatatatgaaataggatatcaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 35531350  T
Q  447 gta 449  Q
    |||    
T  35531349 gta 35531347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 452
Target Start/End: Original strand, 10675885 - 10676090
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  10675885 tccctccgttcttttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 10675984  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| || ||||| ||||| |  || | ||||||  | |||  ||||||||||| |||| ||||||| | | ||||| | || |||||  |||||||    
T  10675985 atattatcctaagttatttattgcggagagagaaatatataaaatgagatattaaataaataaggttattatagtaaaagtacaacttattgcatcaaaa 10676084  T
Q  447 gtaata 452  Q
    ||||||    
T  10676085 gtaata 10676090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 31588993 - 31588872
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||||||||||||||||  ||||  |||||||||||||||||||||||||||||||    ||||||||||||| ||||||||   ||||| ||    
T  31588993 tccctccgttcctttttaagtgtcatttttagagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttattttacca 31588894  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  31588893 atattatccttagttatttatt 31588872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 49908436 - 49908315
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||  |||||| ||||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  49908436 tccctccgttcctttttaagtgtcacttttaaagaaaaattttgtttctatttaactgtcacttttaaagttcaatgcaacattaaatattgttttacca 49908337  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  49908336 atattatccttagttatttatt 49908315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 251 - 368
Target Start/End: Complemental strand, 45226834 - 45226710
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgtttta 343  Q
    |||| ||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   |||||||    
T  45226834 tattacctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 45226735  T
Q  344 tcaatattattcttagttaattatt 368  Q
    |||||||| | |||||||| |||||    
T  45226734 tcaatattgtccttagttatttatt 45226710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 5597814 - 5597920
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatatta---aatgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    ||||||||||||| ||||   ||||||||||||||||||      
T  5597814 ttcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcacttccaaagttcaatgcaacattaaataatgttttatcaatattacc 5597913  T
Q  355 cttagtt 361  Q
    |||||||    
T  5597914 cttagtt 5597920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 437
Target Start/End: Original strand, 9361956 - 9362146
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| | ||||   ||||||| ||    
T  9361956 tccctccgttcctttttaagtgtcatttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttacca 9362055  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttatt 437  Q
    | ||||  |||||||| |||||||  || | ||||||  ||||| |||||||||||||| || ||||||| | | ||||| |||| |||||    
T  9362056 acattacccttagttatttattacgaagagagaaatatatgaaataagatattaaatgactaaggttattatagtaaaagtataaattatt 9362146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 43500497 - 43500691
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||||  ||||| ||||||| |||||| |||||||| |||||||    |||||||||||| |||||||   ||||||| |||||||||     
T  43500497 ttcctttttaagtgtcatttttggagaaaatatttgttcctatttaagtgtcacttttaaagttcaatgcagtattaaatgttgttttaccaatattatc 43500596  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| ||||| || || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  43500597 cttagttatttattgcagagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagta 43500691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 44818440 - 44818598
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat---gttttatcaata 349  Q
    |||| |||||||||||| ||| |||||| ||||||| |||||| |||||||||| ||| |    ||||||||||||| |||||||   |||||| |||||    
T  44818440 ctccgttcctttttaagcgtcacttttgcagaaaatctttgttcctatttaactttcattttcaaagttcaatgcaacattaaatattgttttaccaata 44818539  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| |||||||| ||||| ||||| | ||||||  |||||  ||||||||||||||||    
T  44818540 ttatccttagttatttattgcatagagagaaatatatgaaatgagatattaaatgaata 44818598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 45368071 - 45368273
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||||||||||||||| |||| ||||||  ||||||||||||||||||||| ||||||||    |||||||||| || ||| ||   ||||||| ||    
T  45368071 tccctcctttcctttttaaatgtcacttttggggaaaatttttgtttctatttatctgtcactttcaaagttcaatgaaacattgaatgttgttttacca 45368170  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  45368171 atattatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 45368270  T
Q  447 gta 449  Q
    |||    
T  45368271 gta 45368273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 21927950 - 21927829
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||||||  |||||||||||||||    ||||||||||||| ||||||||   ||||| ||    
T  21927950 tccctccgttcctttttaagtgtcacttttgcagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttattttacca 21927851  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  21927850 atattatccttagttatttatt 21927829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 35255477 - 35255590
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||    ||||||||||||| |||||||||   |||| |||||||||     
T  35255477 ttcctttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttgatttaccaatattatc 35255576  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  35255577 cttagttatttatt 35255590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 44182743 - 44182864
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  ||||| ||||||  |||||||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  44182743 tccctccgttcctttttaagtgtcaattttggagaaaaaatttgtttctatttaactgtcactctcaaagttcaatgcaacattaaatgttgttttacca 44182842  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||| |||||||| |||||    
T  44182843 atattatccttagttatttatt 44182864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 449
Target Start/End: Complemental strand, 37609552 - 37609353
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| |||||||||||||||| |||||| ||||||||||||||  |||||||||||||    | |||||||||||||  |||||   ||||||| |||||    
T  37609552 ctccgttcctttttaagtgtcacttttggagaaaatttttgttcttatttaactgtcattttcaaagttcaatgcaacgttaaatgttgttttaccaata 37609453  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| |||||||| ||||| |  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  ||||||||||    
T  37609452 ttatccttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagta 37609353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 262 - 358
Target Start/End: Complemental strand, 40926989 - 40926886
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatcaatattatt 354  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    ||||||||||||| | |||   ||||||||||||||||| |    
T  40926989 ttcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaacgatgttttatcaatattact 40926890  T
Q  355 ctta 358  Q
    ||||    
T  40926889 ctta 40926886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 13699165 - 13699359
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| | ||| ||||| ||||||||||||||| |||    ||||||||||||| ||||||   |||||||  |||| |||     
T  13699165 ttcctttttaagtgtcgcttttgaataaattttttatttctatttaactgttactttcaaagttcaatgcaacattaaatgttgttttacgaatactatc 13699264  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||||||| |||||||  || | ||||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||| |||||  ||||||||||    
T  13699265 cttagttatttattacggagagagaaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagta 13699359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 362
Target Start/End: Original strand, 19093248 - 19093366
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgtttta 343  Q
    |||||||||| |||||||||||||||| |||||| |||||| ||||||| ||||||| ||||||||    ||||||||||||| ||||||   | |||||    
T  19093248 tattccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttacctgtcactttcaaagttcaatgcaacattaaatattatttta 19093347  T
Q  344 tcaatattattcttagtta 362  Q
     ||||||||| ||||||||    
T  19093348 ccaatattatccttagtta 19093366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 19929720 - 19929518
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || |||||||||||||||||||| ||||| |||||||| ||||||||| ||||||    ||||||||||||  ||||||   ||||||| ||    
T  19929720 tccctccgtttctttttaagtgtctcttttggagaaattttttgttcctatttaaccgtcactttcaaagttcaatgcatcattaaatgttgttttacca 19929621  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||||||| |||| ||||| |  || | ||||||  |||||  |||| |||||| |||| ||| ||| | | ||||| |||| |||||  |||||||    
T  19929620 atattattctttgttatttattgcggagagagaaatatatgaaatgagatgttaaattaataaggtcattatagtaaaagtataacttattgcatcaaaa 19929521  T
Q  447 gta 449  Q
    |||    
T  19929520 gta 19929518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 449
Target Start/End: Original strand, 28679004 - 28679206
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||||| |||||| |||||||  | |||||||||||||    ||||||||||||| ||||||   ||||||| ||    
T  28679004 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcttgtttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 28679103  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| |  ||||||| ||||| |  || | ||||||  | |||  |||||||||||||||| ||| ||| | | ||||| ||||||||||  |||||||    
T  28679104 atattgtctttagttatttattgcggagagagaaatatatcaaatgagatattaaatgaataaggtcattatagtaaaagtataatttattgcatcaaaa 28679203  T
Q  447 gta 449  Q
    |||    
T  28679204 gta 28679206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 408
Target Start/End: Complemental strand, 35484021 - 35483874
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||  ||||| |||||||||||||| ||||||||||||||||    |||||||||| |||||||||   ||||||| ||||||||| ||||    
T  35484021 tttttaagtgtcatttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgtaatattaaatgttgttttaccaatattatcctta 35483922  T
Q  359 gttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  35483921 gttatttattgc--agagagaaatatatgaaatgagatattaaatgaata 35483874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 371
Target Start/End: Original strand, 36318338 - 36318460
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||  | ||| |||||||||||||||||||||| ||    ||||||||||||| ||||||   ||||||||||||    
T  36318338 cctccgttcctttttaagtgtcacttttagataaattttttgtttctatttaactgtcgctttcaaagttcaatgcaacattaaatgttgttttatcaat 36318437  T
Q  349 attattcttagttaattattaca 371  Q
    ||||| |||| ||| ||||||||    
T  36318438 attatccttatttatttattaca 36318460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 13507761 - 13507874
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    |||||||||| || ||||||   ||||||| |||||||||     
T  13507761 ttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgttttaccaatattatc 13507860  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  13507861 cttagttatttatt 13507874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 13514949 - 13515062
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    |||||||||| || ||||||   ||||||| |||||||||     
T  13514949 ttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgttttaccaatattatc 13515048  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  13515049 cttagttatttatt 13515062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 18034072 - 18033919
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||  ||||| ||||| || ||||||||||||||||    ||||||||| ||| ||||||   |||||||||||||||||     
T  18034072 ttcctttttaagtgtcactttttgagaaattttttattcctatttaactgtcactttcaaagttcaatccaacattaaatattgttttatcaatattatc 18033973  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| ||||| |  || | ||||||  |||||  ||||||||||||||||    
T  18033972 cttagttatttattgcggagagagaaatatatgaaatgagatattaaatgaata 18033919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 337
Target Start/End: Complemental strand, 31570891 - 31570804
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat 337  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||    ||||||||||||| |||||||    
T  31570891 tccctccgttcctttttaagtgtctcttttggagaaattttttgttcatatttaactgtcactttcgaagttcaatgcaacattaaat 31570804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 51613394 - 51613515
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||||  |||||||||||||| ||||||||||||||||    ||||||||||||  ||||||   ||||||||||    
T  51613394 tccctccattcctttttaattgtcacttttagagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttgttttatca 51613493  T
Q  347 atattattcttagttaattatt 368  Q
    |||||| |||||| || |||||    
T  51613494 atattactcttagatatttatt 51613515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 8464703 - 8464613
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||||||    
T  8464703 tccctccgttcgtttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 8464613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 446
Target Start/End: Original strand, 52749000 - 52749197
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaa---atgttttatca 346  Q
    ||||||| || |||||||| ||||  ||||| ||||| |||||||| |||||| |||||||||    |||||||||||||||||||   ||||| |||||    
T  52749000 tccctccgtttctttttaaatgtcatttttgaagaaattttttgttcctatttgactgtcactttcaaagttcaatgcaatattaaatgatgttatatca 52749099  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||||||| |||||   | | | ||||||  ||||| ||||||||||||||||| | ||||| | | ||||| ||| ||||||  |||||||    
T  52749100 atattatccttagttatttatt--gtggagagaaatatatgaaataagatattaaatgaataagattattatagtaaaagtatagtttattgcatcaaaa 52749197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 368
Target Start/End: Original strand, 32347963 - 32348082
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| |||||||||||||||| |||||| |||||| ||||||||| ||||||||| ||||    ||||||||||||| ||||||   ||||||| ||||    
T  32347963 cctccgttcctttttaagtgtcacttttggagaaaaattttgtttcaatttaactgccactttcaaagttcaatgcaacattaaatgttgttttaccaat 32348062  T
Q  349 attattcttagttaattatt 368  Q
    ||||  |||||||| |||||    
T  32348063 attacccttagttatttatt 32348082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 1429267 - 1429388
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||| ||| |||||||| |||||| |||||||||||||| ||||||||||||||||    ||||||| ||||| ||||||   ||||||| ||    
T  1429267 tccctccgttcttttctaagtgtcacttttggagaaaatttttgttcctatttaactgtcacttttaaagttcattgcaacattaaatgttgttttacca 1429366  T
Q  347 atattattcttagttaattatt 368  Q
    ||||| | |||||||| |||||    
T  1429367 atattgtccttagttatttatt 1429388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 32168566 - 32168461
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||||  |||||||||||||||||||||||||||||    | ||||||||||||  ||||||   ||||||||||    
T  32168566 tccctccgttcctttttaattgtcacttttagagaaaatttttgtttctatttaactgtcagtttcaaagttcaatgcatcattaaatgttgttttatca 32168467  T
Q  347 atatta 352  Q
    ||||||    
T  32168466 atatta 32168461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 449
Target Start/End: Complemental strand, 42787448 - 42787338
Alignment:
Q  339 ttttatcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttatta 438  Q
    ||||| ||||||||| |||||||| |||||||  || | ||||||  | | ||||||||||||||||||| ||||||| |||  ||||||||| |||||     
T  42787448 ttttaccaatattatccttagttatttattacggagagagaaatacattatacaagatattaaatgaataaggttattattgagaaaggataaattattg 42787349  T
Q  439 tatcaaaagta 449  Q
    |||||||||||    
T  42787348 tatcaaaagta 42787338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 369
Target Start/End: Original strand, 36850640 - 36850748
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg--ttttatcaatattattcttag 359  Q
    ||||| |||||| |||||||||||| |||||||||||||||||| ||||||    |||||| |||||||||||||||  ||||| |||||||| | ||||    
T  36850640 ttttttagtgtcacttttgtagaaattttttgtttctatttaaccgtcactttcaaagttc-atgcaatattaaatgtattttaccaatattacttttag 36850738  T
Q  360 ttaattatta 369  Q
    ||| ||||||    
T  36850739 ttatttatta 36850748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 9127647 - 9127740
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||| |||| |||||||||||||||| |||||| | ||| ||||||| | ||||||| |||||||    ||||||||||||||||||||||||    
T  9127647 tattctctcccttcctttttaagtgtcacttttggataaattttttgtgtttatttaattgtcactttcgaagttcaatgcaatattaaatgtt 9127740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 368
Target Start/End: Original strand, 38648442 - 38648561
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||||||||||| |||| |||||  |||||| ||||||| ||||||||||||||||    || |||||||||| ||||||   ||||||| ||||    
T  38648442 cctccattcctttttaaatgtcactttttgagaaaaattttgttcctatttaactgtcactttcaaacttcaatgcaacattaaatgttgttttaccaat 38648541  T
Q  349 attattcttagttaattatt 368  Q
    ||||| |||||||| |||||    
T  38648542 attatccttagttatttatt 38648561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 370
Target Start/End: Original strand, 17013407 - 17013528
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaat 348  Q
    ||||| ||||||||||||||| ||||||| ||||  |||||  ||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||    
T  17013407 cctccgttcctttttaagtgtttcttttggagaattttttttcttctatttaactgtcacttttgaagttcaatgcaacattaaatattgttttaccaat 17013506  T
Q  349 attattcttagttaattattac 370  Q
    |||||  ||| ||| |||||||    
T  17013507 attatctttacttatttattac 17013528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 37296979 - 37296917
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| ||| ||||||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  37296979 tccctccgttcgtttttaagtgtctcttttggagaaattttttgttcatatttaactgtcact 37296917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 1677199 - 1677255
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaact 310  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||    
T  1677199 tccctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaact 1677255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 15660573 - 15660728
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||||  ||||| |||||  ||||||| ||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| |    
T  15660573 ctccgttcctttttaagtgtcatttttggagaaatattttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaaca 15660672  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatga 405  Q
    |||  |||||||| |||||||  || | ||||||  ||||| || |||||||||||    
T  15660673 ttacccttagttatttattacggagagagaaatatatgaaataaaatattaaatga 15660728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 19349633 - 19349431
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||| | |||||| ||||||| ||||||||| ||||||    ||||| ||||||| ||||||   ||||||| ||    
T  19349633 tccctccgttcctttttaaatgtcactttcggagaaaaattttgttcctatttaacagtcactttcaaagttgaatgcaacattaaatgttgttttacca 19349534  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||| | |||||||| ||||| |  || |  |||||  |||||  |||||||||||||||| ||| ||| | | ||||| |||  |||||  |||||||    
T  19349533 atattgtccttagttatttattgcggagagataaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaa 19349434  T
Q  447 gta 449  Q
    |||    
T  19349433 gta 19349431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 449
Target Start/End: Complemental strand, 19455644 - 19455451
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattatt 354  Q
    ||||||| |||||||| |||||| ||||| |||||||||| |||||| |||||||    ||||||||||||| ||||||||||   ||| ||||||||      
T  19455644 ttcctttataagtgtcacttttggagaaa-tttttgtttcaatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacc 19455546  T
Q  355 cttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||| ||| ||||| |  || | |||||   |||||||  |||||||||||||| |  |||||| | ||| | |||| ||||| |||||||||||    
T  19455545 cttaattatttattgcggagagagaaatctatgaaacataatattaaatgaataagactattttagtaaaggtataaattattgtatcaaaagta 19455451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 37437304 - 37437186
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||| |||||||||||| | || | | ||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||    
T  37437304 ctcccttcttttttaagtgtcacgttaggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaata 37437205  T
Q  350 ttattcttagttaattatt 368  Q
    || |||||||||| |||||    
T  37437204 ttgttcttagttatttatt 37437186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 51974425 - 51974223
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  |||| || ||||   ||||||| ||||||||||||    | ||||||||||||||||||||   ||||||| ||    
T  51974425 tccctccgttcctttttaagtgtcatttttttaaaaaaaaattgtttccatttaactgtcattttcgaagttcaatgcaatattaaatattgttttacca 51974326  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||| |||  ||| |||||    || | ||||||  |||||  | |||||||||||||| ||||||| | | ||||| |||  ||||| ||||||||    
T  51974325 atattatccttgcttatttattgtgaagagagaaatatatgaaatgaaatattaaatgaataaggttattatagtaaaagtatacattattgtatcaaaa 51974226  T
Q  447 gta 449  Q
    |||    
T  51974225 gta 51974223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 51972527 - 51972473
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||||||| |||||||    
T  51972527 ttcctttttaagtgtctcttttgaagaaattttttgttcttatttaattgtcact 51972473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 1038074 - 1038156
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||  ||||||  |||||| ||||||||||||||||    ||||| ||||||||||||||||||    
T  1038074 ttcctttttaattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagtttaatgcaatattaaatgtt 1038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 1044980 - 1045062
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||  ||||||  |||||| ||||||||||||||||    ||||| ||||||||||||||||||    
T  1044980 ttcctttttaattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagtttaatgcaatattaaatgtt 1045062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 13566659 - 13566749
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| ||||||||||||||||  ||||  |||||| |||| ||| |||||||| ||||||    ||||||||||||| ||||||||||    
T  13566659 tccctccgttcctttttaagtgtcattttttgagaaaaattttatttttatttaaccgtcactttcaaagttcaatgcaacattaaatgtt 13566749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 449
Target Start/End: Original strand, 43952773 - 43952973
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaat 348  Q
    ||||| || |||||||||||||  ||||| ||||| ||||||||  |||||||||||||||    |||||||||| || ||||||||||   |||  |||    
T  43952773 cctccgtttctttttaagtgtcatttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgaaacattaaatgttgttttacaaat 43952872  T
Q  349 attattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagt 448  Q
    |||||  ||||||| ||||| |  || | ||||||  |||||   ||| ||||||||||| ||| ||| | | ||||| |||| |||||| |||||||||    
T  43952873 attatctttagttatttattgcggagagagaaatatatgaaatgcgatgttaaatgaataaggtcattatagtaaaagtataacttattacatcaaaagt 43952972  T
Q  449 a 449  Q
    |    
T  43952973 a 43952973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 18344309 - 18344369
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca 314  Q
    ||||||| || |||||||||||||||||||   ||||||||||||||| |||||| |||||    
T  18344309 tccctccgtttctttttaagtgtctcttttaacgaaaatttttgtttcaatttaagtgtca 18344369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 437
Target Start/End: Original strand, 38597581 - 38597764
Alignment:
Q  262 ttcctttttaa-gtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattat 353  Q
    ||||||||||| |||||  ||||| ||||| |||| ||| ||||||||||||||||    ||||||||||||| | ||||   ||||||| ||| ||||     
T  38597581 ttcctttttaaagtgtcatttttggagaaacttttcgttcctatttaactgtcactttcaaagttcaatgcaacaataaatattgttttaccaacattac 38597680  T
Q  354 tcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttatt 437  Q
     |||||||| ||||||   || | ||||||  ||||| |||||||||||||| || ||||||| | | ||||| |||| |||||    
T  38597681 ccttagttatttattatggagagagaaatatatgaaataagatattaaatgactaaggttattatagtaaaagtataaattatt 38597764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 1428204 - 1428288
Alignment:
Q  256 cctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa 336  Q
    ||||| ||||||||||||| ||  ||||  ||||| |||||||||||||| ||||||||||    ||||||||||||||| ||||    
T  1428204 cctcccttcctttttaagtatcagttttagagaaattttttgtttctattcaactgtcactttcaaagttcaatgcaataataaa 1428288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 8008413 - 8008302
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||  |||||||| ||||||  ||||| || ||||||||||||||    ||| ||||| ||||||||||   |||||||||||||||| |    
T  8008413 ttcctttttaagt--ctcttttggagaaaaaatttgtctcaatttaactgtcacttttaaagatcaatacaatattaaatgttgttttatcaatattact 8008316  T
Q  355 cttagttaattatt 368  Q
    |||| ||| |||||    
T  8008315 cttaattatttatt 8008302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 35605453 - 35605555
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    |||||||||||| |||||| ||||| |||||||||  ||||||||||||||    || || ||||||| ||||||   ||||||| ||||||||| ||||    
T  35605453 tttttaagtgtcacttttgaagaaattttttgtttaaatttaactgtcactttcaaaatttaatgcaaaattaaatgttgttttaccaatattatcctta 35605552  T
Q  359 gtt 361  Q
    |||    
T  35605553 gtt 35605555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 37735390 - 37735306
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaat 337  Q
    |||| ||||||||||| |||| |||||  ||||||  |||||| ||||||||||||||||    ||||||||||||| |||||||    
T  37735390 ctccgttcctttttaactgtcacttttaaagaaaaaatttgttcctatttaactgtcactgtcaaagttcaatgcaaaattaaat 37735306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 10506796 - 10506917
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatca 346  Q
    ||||||| ||| |||| ||||||| |||||| ||||| ||||||||   ||||||||||||||    |||||||||||||  |||||||   |||||||     
T  10506796 tccctccattcattttaaagtgtcacttttggagaaattttttgttctaatttaactgtcactttcaaagttcaatgcaactttaaatgttattttatcg 10506895  T
Q  347 atattattcttagttaattatt 368  Q
    ||||||  |||||||| |||||    
T  10506896 atattacccttagttatttatt 10506917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 30702536 - 30702423
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    ||||||||||||||| ||||||| | ||| |||||||||  |||||| | |||||    |||||||||||||  |||||   ||||||| |||||||||     
T  30702536 ttcctttttaagtgtttcttttgcataaattttttgttttaatttaaatctcactttcaaagttcaatgcaacgttaaatgttgttttaccaatattatc 30702437  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  30702436 cttagttatttatt 30702423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 48508116 - 48508178
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| ||||||||||||||||| ||||| ||||  ||| |||| |||||||| |||||||    
T  48508116 tccctccgttcctttttaagtgtctattttgaagaatttttatgttcctatttaattgtcact 48508178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 472
Target Start/End: Complemental strand, 1039430 - 1039397
Alignment:
Q  439 tatcaaaagtaatactccctccgtccctaattat 472  Q
    ||||||||||| ||||||||||||||||||||||    
T  1039430 tatcaaaagtagtactccctccgtccctaattat 1039397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 472
Target Start/End: Complemental strand, 1046336 - 1046303
Alignment:
Q  439 tatcaaaagtaatactccctccgtccctaattat 472  Q
    ||||||||||| ||||||||||||||||||||||    
T  1046336 tatcaaaagtagtactccctccgtccctaattat 1046303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 46096573 - 46096644
Alignment:
Q  295 ttgtttctatttaactgtcac-taagttcaatgcaatattaaa---tgttttatcaatattattcttagtta 362  Q
    ||||||| ||||||||||||| ||| |||||||||| ||||||   |||||||||||||||||  |||||||    
T  46096573 ttgtttcaatttaactgtcacttaaattcaatgcaacattaaatgttgttttatcaatattatctttagtta 46096644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 2059977 - 2059905
Alignment:
Q  336 atgttttatcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||||||||||||| |||||||| ||||| |  || |  |||||  ||||| |||||||||||||||||    
T  2059977 atgttttatcaatattatccttagttatttattgcggagagaaaaatatatgaaataagatattaaatgaata 2059905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 40680687 - 40680635
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca 314  Q
    ||||||||| ||||| | ||| | ||||| |||||||||||||||||||||||    
T  40680687 ttccttttttagtgtttttttgggagaaattttttgtttctatttaactgtca 40680635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 69083 - 69244
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| || ||||||||||||| |||||| |||||||||||||| |||||||| |||||||    ||||||||||||||||||||   ||||||| ||    
T  69083 tccctccgtttctttttaagtgtcacttttgaagaaaatttttgttcctatttaattgtcactttcaaagttcaatgcaatattaaatgttgttttacca 69182  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    ||||| | |||||||| ||||| |  || | ||||||  ||||| |||||||||||||||||    
T  69183 atattgtccttagttatttattgcggagagagaaatatatgaaataagatattaaatgaata 69244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2146 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 280 - 449
Target Start/End: Original strand, 567 - 737
Alignment:
Q  280 ttttgtagaaaatttttgtttctatttaactgtcactaagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaattattacataggg 376  Q
    |||||||||| | |||||||||||||||||| |||  ||||||||||||||||||||||||   || |||||||||  |||| ||| |||||||| || |    
T  567 ttttgtagaataattttgtttctatttaactatca--aagttcaatgcaatattaaatgttgttttttcaatattacccttaattatttattacaaagag 664  T
Q  377 cgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
     ||||||  |||||||| |||||||||||||  || |||| |||||||  ||||| ||||| ||||| |||||    
T  665 agaaatatatgaaacaatatattaaatgaatgaggctattattggaaattgataaattattgtatcagaagta 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 138989 - 138827
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact-----aagttcaatgcaatattaaatgtt---ttatc 345  Q
    ||||||| |||||||||||||||| |||||  |||||||| |||||  ||||||||||||| |     ||||||||||||| ||||||||||   ||| |    
T  138989 tccctccgttcctttttaagtgtcacttttagagaaaattattgttcttatttaactgtcatttttcaaagttcaatgcaacattaaatgttgttttacc 138890  T
Q  346 aatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaata 408  Q
    |||||||| |||||||| |||||||| || | ||||||  |||||  ||||||||||||||||    
T  138889 aatattatccttagttatttattacagagagagaaatatatgaaatgagatattaaatgaata 138827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 195996 - 195882
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||||||    
T  195996 tccctccgttcctttttaagtgtcatttttggagaaaatttttgttcttatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttatca 195897  T
Q  347 atattattcttagtt 361  Q
    ||||||| |||||||    
T  195896 atattatccttagtt 195882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 49138 - 49251
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattatt 354  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    ||||||||||||| ||||||   ||||||| |||||||||     
T  49138 ttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 49237  T
Q  355 cttagttaattatt 368  Q
    |||||||| |||||    
T  49238 cttagttatttatt 49251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 266 - 370
Target Start/End: Original strand, 2802 - 2913
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaatattattctta 358  Q
    ||||||||||||||||||| ||||  ||||| |||||||||||||||||||    ||||||||||||| ||||||   ||||||| ||||||||| ||||    
T  2802 tttttaagtgtctcttttggagaatttttttatttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatcctta 2901  T
Q  359 gttaattattac 370  Q
    |||| |||||||    
T  2902 gttatttattac 2913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 269 - 449
Target Start/End: Original strand, 8152 - 8339
Alignment:
Q  269 ttaagtgtctcttttgtagaaaatttttgtttctatttaactgtca----ctaagttcaatgcaatattaaa---tgttttatcaatattattcttagtt 361  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    | ||||||||||||| ||||||   ||||||| ||||||| |||||||||    
T  8152 ttaagtgtcacttttgaagaaattttttgtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattcttcttagtt 8251  T
Q  362 aattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    | ||||| || ||   ||||||  |||||  |||||||||||||||| | | ||| | | ||||| |||| |||||  ||||||||||    
T  8252 atttattgcagagaaagaaatatatgaaatgagatattaaatgaataagatcattatagtaaaagtataacttattgcatcaaaagta 8339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 368
Target Start/End: Complemental strand, 26388 - 26264
Alignment:
Q  251 tattccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgtttta 343  Q
    |||||| ||| |||||||||||||||| |||||| ||||||  ||||||||||||||| |||||||    ||||||||||||| ||||||   |||||||    
T  26388 tattccttccgttcctttttaagtgtcacttttggagaaaaaatttgtttctatttaattgtcacttttaaagttcaatgcaacattaaatgttgtttta 26289  T
Q  344 tcaatattattcttagttaattatt 368  Q
     ||||||| | |||||||| |||||    
T  26288 ccaatattgtccttagttatttatt 26264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 494 - 328
Alignment:
Q  257 ctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatcaata 349  Q
    |||| ||||||||||||||| ||||||| | |||  ||||||||| ||||||||||||||    |||||||| | || ||||||   |||||||||||||    
T  494 ctccgttcctttttaagtgtttcttttgaacaaatattttgtttcaatttaactgtcacttttaaagttcaacgtaacattaaatggtgttttatcaata 395  T
Q  350 ttattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatt 416  Q
    |||| |||| ||| ||||| || || |  |||||  |||||  ||||||| |||||||| |||||||    
T  394 ttatccttacttatttattgcaaagagataaatatatgaaattagatattgaatgaataaggttatt 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 449
Target Start/End: Complemental strand, 14979 - 14777
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| |||||||||||||||| |||| | ||||| |||||||| | ||||||||||||||    |||||||||||||  |||||   ||||||||||    
T  14979 tccctccgttcctttttaagtgtcactttcggagaaactttttgttccaatttaactgtcactttcaaagttcaatgcaactttaaatgttgttttatca 14880  T
Q  347 atattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaa 446  Q
    ||||||  | |||||| ||||| |  || | ||||||  ||| |  |||||||||||||||| |  |||| | | ||||| || | ||||| ||||||||    
T  14879 atattacccctagttatttattgcggagagagaaatatatgacatgagatattaaatgaataagtctattatagtaaaagtatcaattattgtatcaaaa 14780  T
Q  447 gta 449  Q
    |||    
T  14779 gta 14777  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 368
Target Start/End: Complemental strand, 72193 - 72084
Alignment:
Q  266 tttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgt---tttatcaatattattctta 358  Q
    ||||||||||| ||||||| ||||| ||||||||  ||||||| |||||||    ||||||||||||| |||||||||   |||| ||||||||| ||||    
T  72193 tttttaagtgtatcttttggagaaattttttgttcttatttaattgtcactttcaaagttcaatgcaacattaaatgttgatttaccaatattatcctta 72094  T
Q  359 gttaattatt 368  Q
    |||| |||||    
T  72093 gttatttatt 72084  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 147386 - 147281
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaa---tgttttatca 346  Q
    ||||||| ||||||||||| |||| |||||  ||||| ||||||||  |||||||||||||||    ||||||||||||| ||||||   ||||||||||    
T  147386 tccctccgttcctttttaattgtcacttttagagaaattttttgttcatatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatca 147287  T
Q  347 atatta 352  Q
    ||||||    
T  147286 atatta 147281  T

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Target: scaffold0886 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 4507 - 4587
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg 338  Q
    |||||||||||| |||| ||||| ||||  ||||||||| |||||||||||||||    ||||||||||||| ||||||||    
T  4507 ttcctttttaagcgtcttttttgaagaatttttttgtttttatttaactgtcactttcaaagttcaatgcaacattaaatg 4587  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 184385 - 184326
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtc 313  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||| || |||||||||||||    
T  184385 tccctccgttcctttttaagtgtcacttttggagaaattttttattcctatttaactgtc 184326  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 449
Target Start/End: Original strand, 77112 - 77273
Alignment:
Q  295 ttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt---ttatcaatattattcttagttaattattacatagggcgaaataattg 387  Q
    ||||| ||||||||||||||||    |||| |||||||||||||||||||   |||  ||||||||  ||||||| ||||| |  || | ||||||  ||    
T  77112 ttgttcctatttaactgtcactttcaaagtccaatgcaatattaaatgttgttttactaatattatctttagttatttattgcggagagagaaatatatg 77211  T
Q  388 aaacaagatattaaatgaatatggttatttttggaaaaggataatttattatatcaaaagta 449  Q
    |||  |||||||||||||||| ||||||| | | ||||| ||| ||||||  ||||||||||    
T  77212 aaatgagatattaaatgaataaggttattatagtaaaagtatagtttattgcatcaaaagta 77273  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 23130 - 23209
Alignment:
Q  265 ctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    |||||||| ||||  ||||| |||||||||||||||||| |||| |||||||    ||||||||| ||| ||||||||||    
T  23130 ctttttaattgtcatttttgaagaaaatttttgtttctaattaagtgtcactttcaaagttcaatacaacattaaatgtt 23209  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 252577 - 252639
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact 316  Q
    ||||||| ||||||||||| |||| |||||| | ||  |||||||||||| ||||||||||||    
T  252577 tccctccgttcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcact 252639  T

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Target: scaffold0325 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 298 - 388
Alignment:
Q  254 tccctcctttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||| || |||||||| |||| |||||  ||||||  |||||| |||||||| |||||||    ||||||||||||| ||||||||||    
T  298 tccctccgtttctttttaattgtcacttttagagaaaaaatttgttactatttaattgtcactttcaaagttcaatgcaacattaaatgtt 388  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 96311 - 96229
Alignment:
Q  262 ttcctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatgtt 340  Q
    ||||||||||| |||| |||||| | ||  |||||||||||| ||||||||||||    ||||||||| ||| ||||||||||    
T  96311 ttcctttttaattgtcacttttgcataatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgtt 96229  T

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Target: scaffold0343 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 7417 - 7512
Alignment:
Q  264 cctttttaagtgtctcttttgtagaaaatttttgtttctatttaactgtcact----aagttcaatgcaatattaaatg---ttttatcaatatta 352  Q
    ||||||||| ||||  ||||  ||||| |||||||| ||||||||||||||||    ||||||||||||  ||||||||   ||||||||||||||    
T  7417 cctttttaattgtcatttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttattttatcaatatta 7512  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 449
Target Start/End: Complemental strand, 419660 - 419548
Alignment:
Q  337 tgttttatcaatattattcttagttaattattacatagggcgaaataattgaaacaagatattaaatgaatatggttatttttggaaaaggataatttat 436  Q
    |||||||||||||||| ||||||||| |||||||  |  | ||||||  |||||  ||||||||||| |||| | ||||| | | ||||| || | ||||    
T  419660 tgttttatcaatattactcttagttatttattacggaaagagaaatatatgaaatgagatattaaataaataagattattatagtaaaagtatcaattat 419561  T
Q  437 tatatcaaaagta 449  Q
    | |||||||||||    
T  419560 tgtatcaaaagta 419548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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