View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6131_low_36 (Length: 438)

Name: NF6131_low_36
Description: NF6131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6131_low_36
NF6131_low_36
[»] chr8 (21 HSPs)
chr8 (158-398)||(8735878-8736105)
chr8 (399-438)||(5038980-5039019)
chr8 (399-438)||(43484038-43484077)
chr8 (400-438)||(24726031-24726069)
chr8 (400-438)||(32480302-32480340)
chr8 (400-438)||(34194556-34194594)
chr8 (400-438)||(34194666-34194704)
chr8 (400-438)||(37922918-37922956)
chr8 (398-438)||(17911357-17911397)
chr8 (399-438)||(35447890-35447929)
chr8 (399-438)||(40739597-40739636)
chr8 (399-438)||(40802198-40802237)
chr8 (396-438)||(18126047-18126089)
chr8 (399-437)||(32480183-32480221)
chr8 (400-438)||(35447780-35447818)
chr8 (400-438)||(38883942-38883980)
chr8 (400-438)||(42631775-42631813)
chr8 (401-438)||(7256884-7256921)
chr8 (304-381)||(8711484-8711561)
chr8 (405-438)||(13271799-13271832)
chr8 (404-437)||(42631884-42631917)
[»] chr7 (35 HSPs)
chr7 (1-128)||(28596747-28596872)
chr7 (400-438)||(28003174-28003212)
chr7 (400-438)||(37066288-37066326)
chr7 (400-438)||(46658838-46658876)
chr7 (402-438)||(46578371-46578407)
chr7 (403-438)||(3498293-3498328)
chr7 (399-438)||(25270603-25270642)
chr7 (399-438)||(27940851-27940890)
chr7 (399-438)||(46658727-46658766)
chr7 (400-438)||(1729393-1729431)
chr7 (400-438)||(27942431-27942469)
chr7 (400-438)||(28003284-28003322)
chr7 (394-438)||(24211541-24211585)
chr7 (399-438)||(7345004-7345043)
chr7 (399-438)||(18941329-18941368)
chr7 (399-438)||(31670995-31671034)
chr7 (399-438)||(33784055-33784094)
chr7 (399-438)||(37066177-37066216)
chr7 (399-438)||(45833296-45833335)
chr7 (399-438)||(46477128-46477167)
chr7 (399-438)||(48135461-48135500)
chr7 (400-438)||(20353053-20353091)
chr7 (400-438)||(27940741-27940779)
chr7 (400-438)||(36711535-36711573)
chr7 (400-438)||(39728561-39728599)
chr7 (399-437)||(45614949-45614987)
chr7 (400-438)||(46221074-46221112)
chr7 (397-438)||(5212149-5212190)
chr7 (400-437)||(34907772-34907809)
chr7 (397-438)||(43067135-43067176)
chr7 (400-428)||(2927182-2927210)
chr7 (400-428)||(16810929-16810957)
chr7 (406-438)||(19531955-19531987)
chr7 (398-438)||(35593635-35593675)
chr7 (394-438)||(46471058-46471102)
[»] chr2 (31 HSPs)
chr2 (398-438)||(26567742-26567782)
chr2 (398-438)||(40340463-40340503)
chr2 (399-438)||(5204887-5204926)
chr2 (399-438)||(24971200-24971239)
chr2 (399-438)||(45123790-45123829)
chr2 (400-438)||(26567632-26567670)
chr2 (400-438)||(40340575-40340613)
chr2 (400-438)||(43514752-43514790)
chr2 (397-438)||(25668517-25668558)
chr2 (397-438)||(30905230-30905271)
chr2 (405-438)||(32366427-32366460)
chr2 (397-438)||(37486105-37486146)
chr2 (406-438)||(2795416-2795448)
chr2 (399-438)||(4898160-4898199)
chr2 (399-438)||(4945554-4945593)
chr2 (399-438)||(9157969-9158008)
chr2 (399-438)||(20195284-20195323)
chr2 (399-438)||(43514862-43514901)
chr2 (400-438)||(8519942-8519980)
chr2 (400-438)||(8554667-8554705)
chr2 (400-438)||(21208998-21209036)
chr2 (400-438)||(24971311-24971349)
chr2 (400-438)||(25899354-25899392)
chr2 (400-438)||(32366526-32366564)
chr2 (400-438)||(34911204-34911242)
chr2 (400-438)||(38962437-38962475)
chr2 (400-438)||(40739488-40739526)
chr2 (397-438)||(40669069-40669110)
chr2 (402-438)||(5144266-5144302)
chr2 (396-428)||(7728425-7728457)
chr2 (398-438)||(33618303-33618343)
[»] chr4 (45 HSPs)
chr4 (399-438)||(51126100-51126139)
chr4 (399-438)||(51975230-51975269)
chr4 (400-438)||(48079622-48079660)
chr4 (399-438)||(15133940-15133979)
chr4 (403-438)||(23710834-23710869)
chr4 (399-438)||(25856116-25856155)
chr4 (399-438)||(30279135-30279174)
chr4 (399-438)||(43635942-43635981)
chr4 (399-438)||(52256848-52256887)
chr4 (400-438)||(23754298-23754336)
chr4 (397-438)||(13743964-13744005)
chr4 (397-438)||(30051449-30051490)
chr4 (398-438)||(34925910-34925950)
chr4 (398-438)||(46779400-46779440)
chr4 (399-438)||(7695235-7695274)
chr4 (399-438)||(12721640-12721679)
chr4 (399-438)||(17659571-17659610)
chr4 (399-438)||(29978487-29978526)
chr4 (399-438)||(30051338-30051377)
chr4 (399-438)||(30162606-30162645)
chr4 (399-438)||(33811249-33811288)
chr4 (399-438)||(35207434-35207473)
chr4 (399-438)||(41942125-41942164)
chr4 (399-438)||(48079511-48079550)
chr4 (399-438)||(51126211-51126250)
chr4 (399-438)||(53508495-53508534)
chr4 (399-438)||(53551701-53551740)
chr4 (399-438)||(56420426-56420465)
chr4 (400-438)||(9011851-9011889)
chr4 (400-438)||(9968297-9968335)
chr4 (400-438)||(9968436-9968474)
chr4 (400-438)||(12721752-12721790)
chr4 (400-438)||(35207545-35207583)
chr4 (400-438)||(43635832-43635870)
chr4 (400-438)||(44495686-44495724)
chr4 (400-438)||(49745459-49745497)
chr4 (400-438)||(50038446-50038484)
chr4 (400-438)||(50045668-50045706)
chr4 (400-438)||(56420537-56420575)
chr4 (400-433)||(48902109-48902142)
chr4 (405-438)||(55501308-55501341)
chr4 (398-438)||(15641329-15641369)
chr4 (400-436)||(19754323-19754359)
chr4 (400-436)||(19785447-19785483)
chr4 (406-438)||(34926009-34926041)
[»] chr3 (44 HSPs)
chr3 (399-438)||(12569208-12569247)
chr3 (399-438)||(13545672-13545711)
chr3 (399-438)||(5790644-5790683)
chr3 (399-438)||(8126125-8126164)
chr3 (399-438)||(34205558-34205597)
chr3 (399-438)||(46151017-46151056)
chr3 (400-438)||(28791749-28791787)
chr3 (400-438)||(42595724-42595762)
chr3 (405-438)||(42595843-42595876)
chr3 (394-438)||(7672683-7672727)
chr3 (399-438)||(378710-378749)
chr3 (399-438)||(378794-378833)
chr3 (399-438)||(17940183-17940222)
chr3 (399-438)||(18480982-18481021)
chr3 (399-438)||(19679068-19679107)
chr3 (399-438)||(20547788-20547827)
chr3 (399-438)||(21659133-21659172)
chr3 (399-438)||(25995648-25995687)
chr3 (399-438)||(26770827-26770866)
chr3 (403-438)||(28791675-28791710)
chr3 (399-438)||(34935533-34935572)
chr3 (399-438)||(35455558-35455597)
chr3 (399-438)||(39148795-39148834)
chr3 (399-438)||(44435280-44435319)
chr3 (407-438)||(47103762-47103793)
chr3 (399-438)||(48895622-48895661)
chr3 (399-438)||(48909140-48909179)
chr3 (399-438)||(50623142-50623181)
chr3 (399-438)||(53718003-53718042)
chr3 (400-438)||(7933624-7933662)
chr3 (400-438)||(24599985-24600023)
chr3 (400-438)||(32997151-32997189)
chr3 (400-438)||(39333396-39333434)
chr3 (400-438)||(48895496-48895534)
chr3 (400-438)||(50623042-50623080)
chr3 (401-438)||(22995802-22995839)
chr3 (399-432)||(32589435-32589468)
chr3 (399-427)||(1126517-1126545)
chr3 (398-438)||(7933512-7933552)
chr3 (400-432)||(28906716-28906748)
chr3 (400-428)||(39333286-39333314)
chr3 (400-436)||(51204479-51204515)
chr3 (400-432)||(54726051-54726083)
chr3 (400-432)||(54726167-54726199)
[»] chr5 (36 HSPs)
chr5 (400-438)||(35245714-35245752)
chr5 (400-438)||(38283379-38283417)
chr5 (398-438)||(6638224-6638264)
chr5 (398-438)||(22635419-22635459)
chr5 (399-438)||(15385813-15385852)
chr5 (399-438)||(19784629-19784668)
chr5 (399-438)||(33696761-33696800)
chr5 (400-438)||(15385916-15385954)
chr5 (400-438)||(19784530-19784568)
chr5 (400-438)||(20361973-20362011)
chr5 (400-438)||(21369379-21369417)
chr5 (400-438)||(26168294-26168332)
chr5 (397-438)||(10832462-10832503)
chr5 (402-438)||(43340521-43340557)
chr5 (399-438)||(14064805-14064844)
chr5 (399-438)||(14550138-14550177)
chr5 (399-438)||(21163636-21163675)
chr5 (399-438)||(39126120-39126159)
chr5 (399-438)||(39148564-39148603)
chr5 (399-438)||(43585490-43585529)
chr5 (400-438)||(10832375-10832413)
chr5 (396-438)||(14571000-14571042)
chr5 (400-438)||(15966062-15966100)
chr5 (400-438)||(26168184-26168222)
chr5 (400-438)||(29255757-29255795)
chr5 (400-438)||(35245587-35245625)
chr5 (400-438)||(36346785-36346823)
chr5 (400-438)||(36792741-36792779)
chr5 (400-438)||(39603010-39603048)
chr5 (399-432)||(9005059-9005092)
chr5 (402-438)||(1723349-1723385)
chr5 (406-438)||(3161332-3161364)
chr5 (398-438)||(7336961-7337001)
chr5 (399-431)||(13420547-13420579)
chr5 (400-428)||(20914740-20914768)
chr5 (398-438)||(24433641-24433681)
[»] chr1 (43 HSPs)
chr1 (400-438)||(49363490-49363528)
chr1 (399-438)||(1344474-1344513)
chr1 (399-438)||(6763440-6763479)
chr1 (399-438)||(25378363-25378402)
chr1 (399-438)||(26059225-26059264)
chr1 (399-438)||(52222329-52222368)
chr1 (400-438)||(5852684-5852722)
chr1 (400-438)||(6763330-6763368)
chr1 (400-438)||(21909947-21909985)
chr1 (400-438)||(45242848-45242886)
chr1 (400-438)||(46518051-46518089)
chr1 (400-437)||(6603098-6603135)
chr1 (398-438)||(26660750-26660790)
chr1 (398-438)||(32914202-32914242)
chr1 (407-438)||(5753265-5753296)
chr1 (399-438)||(8751427-8751466)
chr1 (399-438)||(17988217-17988256)
chr1 (399-438)||(26660639-26660678)
chr1 (399-438)||(34061938-34061977)
chr1 (399-438)||(34121024-34121063)
chr1 (399-438)||(37255121-37255160)
chr1 (399-438)||(39181157-39181196)
chr1 (399-438)||(40328978-40329017)
chr1 (399-438)||(42761339-42761378)
chr1 (399-438)||(43147541-43147580)
chr1 (399-438)||(46517940-46517979)
chr1 (400-438)||(5852794-5852832)
chr1 (400-438)||(8751538-8751576)
chr1 (400-438)||(12568432-12568470)
chr1 (400-438)||(15998207-15998245)
chr1 (400-438)||(17988310-17988348)
chr1 (400-438)||(33324151-33324189)
chr1 (400-438)||(39181045-39181083)
chr1 (399-437)||(40341837-40341875)
chr1 (400-438)||(47011350-47011388)
chr1 (400-438)||(47912678-47912716)
chr1 (399-428)||(18913597-18913626)
chr1 (401-438)||(24478771-24478808)
chr1 (400-437)||(31919836-31919873)
chr1 (398-438)||(15998317-15998357)
chr1 (400-428)||(38149480-38149508)
chr1 (405-437)||(40328868-40328900)
chr1 (410-438)||(49363423-49363451)
[»] chr6 (16 HSPs)
chr6 (399-436)||(14804271-14804308)
chr6 (399-438)||(10731468-10731507)
chr6 (399-438)||(14804157-14804196)
chr6 (400-438)||(10731579-10731617)
chr6 (400-438)||(11989248-11989286)
chr6 (400-438)||(32786222-32786260)
chr6 (398-438)||(33169288-33169328)
chr6 (399-438)||(9908131-9908170)
chr6 (399-438)||(32364122-32364161)
chr6 (400-438)||(1858383-1858421)
chr6 (400-438)||(11989142-11989180)
chr6 (400-438)||(19687573-19687611)
chr6 (400-438)||(22341958-22341996)
chr6 (400-438)||(28648511-28648549)
chr6 (396-433)||(17514814-17514851)
chr6 (398-438)||(32786110-32786150)
[»] scaffold0287 (1 HSPs)
scaffold0287 (403-438)||(1834-1869)
[»] scaffold0340 (1 HSPs)
scaffold0340 (400-438)||(14139-14177)
[»] scaffold0321 (1 HSPs)
scaffold0321 (400-438)||(1739-1777)
[»] scaffold0111 (1 HSPs)
scaffold0111 (400-433)||(38003-38036)
[»] scaffold0622 (1 HSPs)
scaffold0622 (398-438)||(391-431)
[»] scaffold0047 (1 HSPs)
scaffold0047 (398-438)||(65914-65954)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 5e-97; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 158 - 398
Target Start/End: Complemental strand, 8736105 - 8735878
Alignment:
Q  158 cttataattaaggatgacggagtattttataggcataccaaactctgcattaacctttaatatatatctttcacgtgttcattacttattcttgccctag 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  8736105 cttataattaaggatgacggagtattttataggcataccaaactctgcattaaccttta-----tatctttcacgtgttcattacttattcttgccctag 8736011  T
Q  258 attccaaagacgcttctccctatataaatataactacttattcttgatccttgggccaccatgtcaattatttgctgcactatttcccacaaaaagcaca 357  Q
    ||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8736010 attccaaagacacttctccctata--------actacttattcttgatccttgggccaccatgtcaattatttgctccactttttcccacaaaaagcaca 8735919  T
Q  358 ataaaactttgtcaatttctaatgtgttttgccttcttttg 398  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8735918 ataaaactttgtcaatttctaatgtgttttgccttcttttg 8735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 5038980 - 5039019
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  5038980 atactccctccgttttaaaatataaacaaattttactttt 5039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 43484077 - 43484038
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  43484077 atactccctccgtttttaaatataagcaaattttactttt 43484038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 24726031 - 24726069
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  24726031 tactccctccgtttttaaatataagcaaattttactttt 24726069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 32480340 - 32480302
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32480340 tactccctccgtttcaaaatataagcaaattttactttt 32480302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 34194556 - 34194594
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34194556 tactccctccgtttcaaaatataagcaaattttactttt 34194594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 34194704 - 34194666
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34194704 tactccctccgtttcaaaatataagcaaattttactttt 34194666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 37922956 - 37922918
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  37922956 tactccctccgtttcaaaatataagcaaattttactttt 37922918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 17911357 - 17911397
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  17911357 gatactccctccgtctcaaaatataagcaaattttactttt 17911397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 35447929 - 35447890
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  35447929 atactccatccgtttcaaaatataagcaaattttactttt 35447890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 40739636 - 40739597
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  40739636 atactccctccgtttcaaaatataagcaaaatttactttt 40739597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 40802198 - 40802237
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  40802198 atactccctccgtttctaaatataagcaaattttactttt 40802237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 18126047 - 18126089
Alignment:
Q  396 ttgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| |||||||||||||||||||||||||| || ||||||    
T  18126047 ttgatattccctccgttttaaaatataagcaaaattcactttt 18126089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 32480183 - 32480221
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttacttt 437  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  32480183 atactccctccgtctcaaaatataagcaaattttacttt 32480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 35447780 - 35447818
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  35447780 tactccatccgtttcaaaatataagcaaattttactttt 35447818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 38883942 - 38883980
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  38883942 tactccctccgtttcaaaatataagcaaattttattttt 38883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 42631775 - 42631813
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  42631775 tactccctccgtttctaaatataagcaaattttactttt 42631813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 438
Target Start/End: Original strand, 7256884 - 7256921
Alignment:
Q  401 actccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  7256884 actccctccgttttgaaatataaacaaattttactttt 7256921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 8711561 - 8711484
Alignment:
Q  304 atccttgggccaccatgtcaattatttgctgcactatttcccacaaaaagcacaataaaactttgtcaatttctaatg 381  Q
    |||||| | |||| || ||||||||||||| |||  |||||||||||||| | |||| | ||||||||||||| ||||    
T  8711561 atccttcgcccactatatcaattatttgctccaccttttcccacaaaaagaagaatatatctttgtcaatttccaatg 8711484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 438
Target Start/End: Complemental strand, 13271832 - 13271799
Alignment:
Q  405 cctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||| |||||||||||||    
T  13271832 cctccgttttaaaatataagtaaattttactttt 13271799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Complemental strand, 42631917 - 42631884
Alignment:
Q  404 ccctccgttttaaaatataagcaaattttacttt 437  Q
    ||||||||||| ||||||||||||||||||||||    
T  42631917 ccctccgtttttaaatataagcaaattttacttt 42631884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 1e-54; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28596747 - 28596872
Alignment:
Q  1 atgagctttctaagttgcttgggaaagcaaaagctccatgattccttagctttgtgttttccccctctctaactttaaaatattgctcaattcagttacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||    
T  28596747 atgagctttctaagttgcttgggaaagcaaaagctccatgattccttagctttgtgtttttctcctct--aactttaaaatattgctcaattcagttacc 28596844  T
Q  101 atgtttcaattacttgtacacaaacttg 128  Q
    ||||||||||||||||||||||||||||    
T  28596845 atgtttcaattacttgtacacaaacttg 28596872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 28003174 - 28003212
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28003174 tactccctccgttttaaaatataagcaaattttactttt 28003212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 37066326 - 37066288
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37066326 tactccctccgttttaaaatataagcaaattttactttt 37066288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 46658876 - 46658838
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46658876 tactccctccgttttaaaatataagcaaattttactttt 46658838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 46578407 - 46578371
Alignment:
Q  402 ctccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||    
T  46578407 ctccctccgttttaaaatataagcaaattttactttt 46578371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 438
Target Start/End: Original strand, 3498293 - 3498328
Alignment:
Q  403 tccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||||    
T  3498293 tccctccgttttaaaatataagcaaattttactttt 3498328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 25270642 - 25270603
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  25270642 atactccctccgtttttaaatataagcaaattttactttt 25270603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 27940890 - 27940851
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27940890 atactccctccgtttcaaaatataagcaaattttactttt 27940851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 46658727 - 46658766
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  46658727 atactctctccgttttaaaatataagcaaattttactttt 46658766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 1729393 - 1729431
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1729393 tactccctccgttttaaaatataagcaaattttattttt 1729431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 27942469 - 27942431
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  27942469 tactccctccgtttcaaaatataagcaaattttactttt 27942431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 28003322 - 28003284
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28003322 tactccctccgtttcaaaatataagcaaattttactttt 28003284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 438
Target Start/End: Original strand, 24211541 - 24211585
Alignment:
Q  394 ttttgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||| | |||||||||| |||||||||||||    
T  24211541 ttttgatactccctccgtctcaaaatataagtaaattttactttt 24211585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 7345043 - 7345004
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  7345043 atactccctccgtttctaaatataagcaaattttactttt 7345004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 18941329 - 18941368
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  18941329 atactccgtccgtttcaaaatataagcaaattttactttt 18941368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 31670995 - 31671034
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  31670995 atactccctccgtttttaaatataagtaaattttactttt 31671034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 33784055 - 33784094
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  33784055 atactacctccgttttaaaatataagtaaattttactttt 33784094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 37066177 - 37066216
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  37066177 atactccctccgtctcaaaatataagcaaattttactttt 37066216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 45833335 - 45833296
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  45833335 atacttcctccgtttttaaatataagcaaattttactttt 45833296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 46477128 - 46477167
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  46477128 atacttcctccattttaaaatataagcaaattttactttt 46477167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 48135461 - 48135500
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  48135461 atactccctccgtatttaaatataagcaaattttactttt 48135500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 20353053 - 20353091
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  20353053 tactccatccgtttttaaatataagcaaattttactttt 20353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 27940741 - 27940779
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  27940741 tactccttccgttttaaaatataagcaaattttattttt 27940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 36711535 - 36711573
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  36711535 tactccctccatttttaaatataagcaaattttactttt 36711573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 39728561 - 39728599
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  39728561 tactccctccgttctaaaatataagcaaatttgactttt 39728599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 45614949 - 45614987
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttacttt 437  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  45614949 atactccctccgtttcaaaatataaacaaattttacttt 45614987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 46221074 - 46221112
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  46221074 tactccatccgttttaaaatattagcaaattttactttt 46221112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 5212190 - 5212149
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||| ||| || ||||||    
T  5212190 tgatactccctccgttttaaaatataagtaaaattcactttt 5212149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 34907809 - 34907772
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttacttt 437  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  34907809 tactccctccgtttcaaaatataagcaaaatttacttt 34907772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 43067176 - 43067135
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||| ||| |||||||||||||| |||||||||||||    
T  43067176 tgatactccttccattttaaaatataagtaaattttactttt 43067135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 2927182 - 2927210
Alignment:
Q  400 tactccctccgttttaaaatataagcaaa 428  Q
    |||||||||||||||||||||||||||||    
T  2927182 tactccctccgttttaaaatataagcaaa 2927210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Complemental strand, 16810957 - 16810929
Alignment:
Q  400 tactccctccgttttaaaatataagcaaa 428  Q
    |||||||||||||||||||||||||||||    
T  16810957 tactccctccgttttaaaatataagcaaa 16810929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 438
Target Start/End: Original strand, 19531955 - 19531987
Alignment:
Q  406 ctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||| ||||||||||||||||||||||||    
T  19531955 ctccgtttcaaaatataagcaaattttactttt 19531987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 35593635 - 35593675
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||| |||||||||||||||||| |||||||| ||||    
T  35593635 gatactccatccgttttaaaatataagtaaattttattttt 35593675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 46471102 - 46471058
Alignment:
Q  394 ttttgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||| ||||||||| | ||||||||||||||||||||||||    
T  46471102 tttttatattccctccgtctcaaaatataagcaaattttactttt 46471058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 26567782 - 26567742
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26567782 gatactccctccgttttaaaatataagcaaattttactttt 26567742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 40340463 - 40340503
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  40340463 gatactccctccgtttcaaaatataagcaaattttactttt 40340503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 5204887 - 5204926
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  5204887 atactccctccgttctaaaatataagcaaattttactttt 5204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 24971200 - 24971239
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  24971200 atactccctccgtttcaaaatataagcaaattttactttt 24971239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 45123790 - 45123829
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  45123790 atactccctccgtttttaaatataagcaaattttactttt 45123829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 26567632 - 26567670
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  26567632 tactccctccgtttcaaaatataagcaaattttactttt 26567670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 40340613 - 40340575
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  40340613 tactccctccgtttcaaaatataagcaaattttactttt 40340575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 43514752 - 43514790
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  43514752 tactccctcccttttaaaatataagcaaattttactttt 43514790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 25668558 - 25668517
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  25668558 tgatactccctccgtttctaaatataagcaaattttactttt 25668517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 30905271 - 30905230
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  30905271 tgatactccctccgtttcaaaatataagtaaattttactttt 30905230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 405 - 438
Target Start/End: Original strand, 32366427 - 32366460
Alignment:
Q  405 cctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||    
T  32366427 cctccgttttaaaatataagcaaattttactttt 32366460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 37486146 - 37486105
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  37486146 tgatactccctccgtttctaaatataagcaaattttactttt 37486105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 406 - 438
Target Start/End: Complemental strand, 2795448 - 2795416
Alignment:
Q  406 ctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||    
T  2795448 ctccgttttaaaatataagcaaattttactttt 2795416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 4898160 - 4898199
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  4898160 atactccctccgtttctaaatataagcaaattttactttt 4898199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 4945554 - 4945593
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  4945554 atactccctccgtttctaaatataagcaaattttactttt 4945593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 9157969 - 9158008
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  9157969 atactccctccgtttctaaatataagcaaattttactttt 9158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 20195284 - 20195323
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  20195284 atacttcctccgttttaaaatataagtaaattttactttt 20195323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 43514901 - 43514862
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  43514901 atactccatccgtttcaaaatataagcaaattttactttt 43514862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 8519980 - 8519942
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  8519980 tactccctccgttttaaaatataaataaattttactttt 8519942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 8554667 - 8554705
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  8554667 tactccctccgttttttaatataagcaaattttactttt 8554705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 21209036 - 21208998
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  21209036 tactccctccgttttaaaatataagcaaaattcactttt 21208998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 24971349 - 24971311
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  24971349 tactccctccatttcaaaatataagcaaattttactttt 24971311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 25899354 - 25899392
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  25899354 tactccctccgttttaaaatataagtaaaatttactttt 25899392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 32366564 - 32366526
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| || |||||||||||||||||||||||||||||    
T  32366564 tactccatctgttttaaaatataagcaaattttactttt 32366526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 34911242 - 34911204
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  34911242 tactctctctgttttaaaatataagcaaattttactttt 34911204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 38962437 - 38962475
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  38962437 tactccctccgttttaaaatataagcaaaattcactttt 38962475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 40739488 - 40739526
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  40739488 tacttcctccgttctaaaatataagcaaattttactttt 40739526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 40669110 - 40669069
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  40669110 tgatactccctccgtttctaaatataagcaaaatttactttt 40669069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 438
Target Start/End: Original strand, 5144266 - 5144302
Alignment:
Q  402 ctccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| |||||||||||| |||||||||||||||||||    
T  5144266 ctccatccgttttaaaacataagcaaattttactttt 5144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 428
Target Start/End: Original strand, 7728425 - 7728457
Alignment:
Q  396 ttgatactccctccgttttaaaatataagcaaa 428  Q
    |||||||||||||||||| ||||||||||||||    
T  7728425 ttgatactccctccgtttcaaaatataagcaaa 7728457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 33618343 - 33618303
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||||||||| || ||||||    
T  33618343 gatactccctccgtttcaaaatataagcaaaattcactttt 33618303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 51126100 - 51126139
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51126100 atactccctccgttttaaaatataagcaaattttactttt 51126139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 51975269 - 51975230
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51975269 atactccctccgttttaaaatataagcaaattttactttt 51975230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 48079660 - 48079622
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48079660 tactccctccgttttaaaatataagcaaattttactttt 48079622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 15133979 - 15133940
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  15133979 atacttcctccgttttaaaatataagcaaattttactttt 15133940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 438
Target Start/End: Original strand, 23710834 - 23710869
Alignment:
Q  403 tccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||||    
T  23710834 tccctccgttttaaaatataagcaaattttactttt 23710869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 25856155 - 25856116
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  25856155 atactccctccgtttcaaaatataagcaaattttactttt 25856116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 30279135 - 30279174
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  30279135 atactccctccgttttaaaatataagtaaattttactttt 30279174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 43635981 - 43635942
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  43635981 atactccatccgttttaaaatataagcaaattttactttt 43635942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 52256887 - 52256848
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  52256887 atactccctccgttttaaaatataagcaaattttattttt 52256848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 23754336 - 23754298
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  23754336 tactccctccattttaaaatataagcaaattttactttt 23754298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 13744005 - 13743964
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  13744005 tgatactccctccgtctcaaaatataagcaaattttactttt 13743964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 30051490 - 30051449
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  30051490 tgatactccctccgtctcaaaatataagcaaattttactttt 30051449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 34925910 - 34925950
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  34925910 gatactccatccgttttaaaatataagcaaattttaatttt 34925950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 46779440 - 46779400
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  46779440 gatactccctccgtttttaaatataagcaaattttattttt 46779400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 7695274 - 7695235
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  7695274 atactccctccgtttcaaaatataagcaaaatttactttt 7695235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 12721640 - 12721679
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  12721640 atactccctctgtttcaaaatataagcaaattttactttt 12721679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 17659610 - 17659571
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  17659610 atactccctccgtctcaaaatataagcaaattttactttt 17659571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 29978487 - 29978526
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  29978487 atactccatccattttaaaatataagcaaattttactttt 29978526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 30051338 - 30051377
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  30051338 atactccatccgttttaaaatataagcaaatttaactttt 30051377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 30162606 - 30162645
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  30162606 atactcactccgttctaaaatataagcaaattttactttt 30162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 33811288 - 33811249
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  33811288 atactccctccgtttctaaatataagcaaattttactttt 33811249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 35207434 - 35207473
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  35207434 atactccctccgtttcaaaatataagcaaaatttactttt 35207473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 41942125 - 41942164
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  41942125 atactccctccgtcttaaaatataaacaaattttactttt 41942164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 48079511 - 48079550
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  48079511 atactccatccgtttcaaaatataagcaaattttactttt 48079550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 51126250 - 51126211
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  51126250 atactccctccgtctcaaaatataagcaaattttactttt 51126211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 53508495 - 53508534
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  53508495 atactccctccgtttctaaatataagcaaattttactttt 53508534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 53551740 - 53551701
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  53551740 atactccctccgtttctaaatataagcaaattttactttt 53551701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 56420426 - 56420465
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  56420426 atactccctccgtttttaaatataaacaaattttactttt 56420465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 9011889 - 9011851
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  9011889 tactccctccgttttaaaatataagcaaaattcactttt 9011851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 9968297 - 9968335
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  9968297 tactccctccgtttttaaatataagtaaattttactttt 9968335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 9968474 - 9968436
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  9968474 tactccctccgtttttaaatataagcaaattttattttt 9968436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 12721790 - 12721752
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  12721790 tactccatccgtttcaaaatataagcaaattttactttt 12721752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 35207583 - 35207545
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  35207583 tactccctccgtttcaaaatataagcaaaatttactttt 35207545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 43635832 - 43635870
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  43635832 tactccctccgtttcaaaatataagaaaattttactttt 43635870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 44495686 - 44495724
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  44495686 tactccctccgtttttaaatataagcaaatttgactttt 44495724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 49745459 - 49745497
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  49745459 tactccctccgttttaaaatataatcaaattttattttt 49745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 50038446 - 50038484
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  50038446 tactccctccgtttctaaatataagcaaattttactttt 50038484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 50045668 - 50045706
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  50045668 tactccctccgtttctaaatataagcaaattttactttt 50045706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 56420575 - 56420537
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  56420575 tactccctccgtttctaaatataagcaaattttactttt 56420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Complemental strand, 48902142 - 48902109
Alignment:
Q  400 tactccctccgttttaaaatataagcaaatttta 433  Q
    ||||||||||||||| ||||||||||||||||||    
T  48902142 tactccctccgtttttaaatataagcaaatttta 48902109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 438
Target Start/End: Complemental strand, 55501341 - 55501308
Alignment:
Q  405 cctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| |||||||||||||||||||||||    
T  55501341 cctccgtttttaaatataagcaaattttactttt 55501308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 15641369 - 15641329
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||| ||||||||||||||||||||||  ||||||||    
T  15641369 gatactccttccgttttaaaatataagcaaaaattactttt 15641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 19754359 - 19754323
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactt 436  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  19754359 tactccttccgtttcaaaatataagcaaattttactt 19754323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 19785447 - 19785483
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactt 436  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  19785447 tactccttccgtttcaaaatataagcaaattttactt 19785483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 438
Target Start/End: Complemental strand, 34926041 - 34926009
Alignment:
Q  406 ctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||| ||||||||||||||||||||||||    
T  34926041 ctccgtttcaaaatataagcaaattttactttt 34926009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 12569247 - 12569208
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12569247 atactccctccgttttaaaatataagcaaattttactttt 12569208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 13545711 - 13545672
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13545711 atactccctccgttttaaaatataagcaaattttactttt 13545672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 5790644 - 5790683
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5790644 atactccctccgttttaatatataagcaaattttactttt 5790683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 8126125 - 8126164
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  8126125 atactccctccgtttcaaaatataagcaaattttactttt 8126164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 34205558 - 34205597
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  34205558 atactccctccgtttcaaaatataagcaaattttactttt 34205597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 46151017 - 46151056
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  46151017 atactccctacgttttaaaatataagcaaattttactttt 46151056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 28791787 - 28791749
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28791787 tactccctccgtttcaaaatataagcaaattttactttt 28791749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 42595724 - 42595762
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42595724 tactccctccgttttaaaatataaacaaattttactttt 42595762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 405 - 438
Target Start/End: Complemental strand, 42595876 - 42595843
Alignment:
Q  405 cctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||    
T  42595876 cctccgttttaaaatataagcaaattttactttt 42595843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 438
Target Start/End: Original strand, 7672683 - 7672727
Alignment:
Q  394 ttttgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||    
T  7672683 tttttatactccctccgtttcaaaatataagaaaattttactttt 7672727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 378710 - 378749
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  378710 atactccctccgttttaaaatataagcaaaattcactttt 378749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 378833 - 378794
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  378833 atactccctccgttttaaaatataagcaaaattcactttt 378794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 17940183 - 17940222
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  17940183 atactccctccgtttttaaatataagcaaaatttactttt 17940222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 18481021 - 18480982
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  18481021 atacttcctccgtttttaaatataagcaaattttactttt 18480982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 19679107 - 19679068
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  19679107 atactccctccgtttctaaatataagcaaattttactttt 19679068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 20547788 - 20547827
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  20547788 atactccctccgttttaaaatataagcaaaattcactttt 20547827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 21659133 - 21659172
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  21659133 atactccctcagttttaaaatataagtaaattttactttt 21659172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 25995687 - 25995648
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  25995687 atactccctccgtttttaaatataagcaaatttgactttt 25995648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 26770866 - 26770827
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  26770866 atactccatccgtttcaaaatataagcaaattttactttt 26770827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 438
Target Start/End: Original strand, 28791675 - 28791710
Alignment:
Q  403 tccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28791675 tccctccgtttcaaaatataagcaaattttactttt 28791710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 34935533 - 34935572
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  34935533 atactctctccgtttttaaatataagcaaattttactttt 34935572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 35455558 - 35455597
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  35455558 atactccctccgttttaaaatataagcaaaattcactttt 35455597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 39148834 - 39148795
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  39148834 atactccctccgtttcaaaatataagcaaaatttactttt 39148795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 44435319 - 44435280
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  44435319 atactccctccgtttcaaaatataagcaaatttcactttt 44435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 438
Target Start/End: Original strand, 47103762 - 47103793
Alignment:
Q  407 tccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||    
T  47103762 tccgttttaaaatataagcaaattttactttt 47103793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 48895661 - 48895622
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  48895661 atactccctccgttttaaaatataagcaaaattcactttt 48895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 48909179 - 48909140
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  48909179 atactccctccgttttaaaatataagcaaaattcactttt 48909140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 50623181 - 50623142
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  50623181 atactccctccgtttcaaaatataagcaaattttattttt 50623142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 53718042 - 53718003
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  53718042 atactccatccgtttcaaaatataagcaaattttactttt 53718003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 7933662 - 7933624
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  7933662 tactctctccgtttcaaaatataagcaaattttactttt 7933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 24600023 - 24599985
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  24600023 tactccctccgttcttaaatataagcaaattttactttt 24599985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 32997151 - 32997189
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  32997151 tactccctctgtttttaaatataagcaaattttactttt 32997189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 39333434 - 39333396
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  39333434 tactccctccgtttcaaaatataagcaaaatttactttt 39333396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 48895496 - 48895534
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  48895496 tactccctccgttttaaaatataagcaaaattcactttt 48895534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 50623042 - 50623080
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  50623042 tactccctccgtttcaaaatataaacaaattttactttt 50623080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 22995839 - 22995802
Alignment:
Q  401 actccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  22995839 actccctccgtttttaaatataagcaaattttgctttt 22995802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 32589468 - 32589435
Alignment:
Q  399 atactccctccgttttaaaatataagcaaatttt 432  Q
    |||||||||||||| |||||||||||||||||||    
T  32589468 atactccctccgttctaaaatataagcaaatttt 32589435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 1126545 - 1126517
Alignment:
Q  399 atactccctccgttttaaaatataagcaa 427  Q
    |||||||||||||||||||||||||||||    
T  1126545 atactccctccgttttaaaatataagcaa 1126517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 7933512 - 7933552
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| |||||||||||||||||||| |||||||| ||||    
T  7933512 gatacttcctccgttttaaaatataagtaaattttattttt 7933552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 432
Target Start/End: Original strand, 28906716 - 28906748
Alignment:
Q  400 tactccctccgttttaaaatataagcaaatttt 432  Q
    ||||||||||||||| |||||||||||||||||    
T  28906716 tactccctccgtttttaaatataagcaaatttt 28906748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 39333286 - 39333314
Alignment:
Q  400 tactccctccgttttaaaatataagcaaa 428  Q
    |||||||||||||||||||||||||||||    
T  39333286 tactccctccgttttaaaatataagcaaa 39333314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 51204479 - 51204515
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactt 436  Q
    |||||| |||||||||||||||||| |||||||||||    
T  51204479 tactccttccgttttaaaatataagtaaattttactt 51204515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 432
Target Start/End: Original strand, 54726051 - 54726083
Alignment:
Q  400 tactccctccgttttaaaatataagcaaatttt 432  Q
    ||||||||||||||| |||||||||||||||||    
T  54726051 tactccctccgtttttaaatataagcaaatttt 54726083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 432
Target Start/End: Complemental strand, 54726199 - 54726167
Alignment:
Q  400 tactccctccgttttaaaatataagcaaatttt 432  Q
    ||||||||||||||| |||||||||||||||||    
T  54726199 tactccctccgtttttaaatataagcaaatttt 54726167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 35245752 - 35245714
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35245752 tactccctccgttttaaaatataagcaaattttactttt 35245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 38283379 - 38283417
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38283379 tactccctccgttttaaaatataagcaaattttactttt 38283417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 6638224 - 6638264
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  6638224 gatactccctccgtttttaaatataagcaaattttactttt 6638264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 22635459 - 22635419
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  22635459 gatactccctccgttttaaaatataagcaaatttcactttt 22635419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 15385813 - 15385852
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  15385813 atactccatccgttttaaaatataagcaaattttactttt 15385852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 19784668 - 19784629
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19784668 atactccctccgtttcaaaatataagcaaattttactttt 19784629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 33696800 - 33696761
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  33696800 atactccctccgtttcaaaatataagcaaattttactttt 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 15385954 - 15385916
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  15385954 tacttcctccgttttaaaatataagcaaattttactttt 15385916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 19784530 - 19784568
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  19784530 tactccctccgtttcaaaatataagcaaattttactttt 19784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 20361973 - 20362011
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20361973 tactccctccgtttttaaatataagcaaattttactttt 20362011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 21369417 - 21369379
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  21369417 tactccctccgttttaaaatataagcaaaatttactttt 21369379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 26168332 - 26168294
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  26168332 tactccctccgtttcaaaatataagcaaattttactttt 26168294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 10832503 - 10832462
Alignment:
Q  397 tgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  10832503 tgatactccttccgttttaaaatataagtaaattttactttt 10832462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 43340557 - 43340521
Alignment:
Q  402 ctccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||||||||||||||||||||||||||||||||    
T  43340557 ctccatccgttttaaaatataagcaaattttactttt 43340521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 14064805 - 14064844
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  14064805 atactccctccgtttttaaatataagtaaattttactttt 14064844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 14550177 - 14550138
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  14550177 atactccctccgttttaaaatataagcaaaattcactttt 14550138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 21163675 - 21163636
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  21163675 atactccctctgttttaaaatataagtaaattttactttt 21163636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 39126159 - 39126120
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  39126159 atactccctccgttccaaaatataagcaaattttactttt 39126120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 39148603 - 39148564
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  39148603 atactccctccgttttaaaatataagcaaaatttattttt 39148564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 43585490 - 43585529
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  43585490 atactccctccgtttttaaatataaacaaattttactttt 43585529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 10832375 - 10832413
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  10832375 tactctctccgttttaaaatataagtaaattttactttt 10832413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 14571000 - 14571042
Alignment:
Q  396 ttgatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||  |||||||||||||||||| ||||    
T  14571000 ttgatactccctccgtttctaaatataagcaaattttattttt 14571042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 15966100 - 15966062
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  15966100 tacttcctccgtttcaaaatataagcaaattttactttt 15966062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 26168184 - 26168222
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  26168184 tacttcctccgttttgaaatataagcaaattttactttt 26168222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 29255795 - 29255757
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  29255795 tactccctccgtttctaaatataagcaaattttactttt 29255757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 35245587 - 35245625
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35245587 tactccctcagtttcaaaatataagcaaattttactttt 35245625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 36346785 - 36346823
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  36346785 tactccgtccgttttaaaatataagtaaattttactttt 36346823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 36792779 - 36792741
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  36792779 tacttcctccgttttaaaatataagtaaattttactttt 36792741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 39603048 - 39603010
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  39603048 tactccatccgtttcaaaatataagcaaattttactttt 39603010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 9005092 - 9005059
Alignment:
Q  399 atactccctccgttttaaaatataagcaaatttt 432  Q
    |||||||||||||||| |||||||||||||||||    
T  9005092 atactccctccgtttttaaatataagcaaatttt 9005059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 1723385 - 1723349
Alignment:
Q  402 ctccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| |||||| |||||||||||||||||||||||    
T  1723385 ctcccttcgtttttaaatataagcaaattttactttt 1723349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 438
Target Start/End: Complemental strand, 3161364 - 3161332
Alignment:
Q  406 ctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||| |||||||||||||||||||||||    
T  3161364 ctccgtttttaaatataagcaaattttactttt 3161332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 7337001 - 7336961
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  7337001 gatactccttccgtttctaaatataagcaaattttactttt 7336961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 13420579 - 13420547
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattt 431  Q
    |||||||||||||||| ||||||||||||||||    
T  13420579 atactccctccgtttttaaatataagcaaattt 13420547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 20914740 - 20914768
Alignment:
Q  400 tactccctccgttttaaaatataagcaaa 428  Q
    |||||||||||||||||||||||||||||    
T  20914740 tactccctccgttttaaaatataagcaaa 20914768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 24433681 - 24433641
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||||||||||||||||||| |||||||| ||||    
T  24433681 gatactcactccgttttaaaatataagtaaattttattttt 24433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 49363528 - 49363490
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49363528 tactccctccgttttaaaatataagcaaattttactttt 49363490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 1344513 - 1344474
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  1344513 atactccctccgttttaaaatataagcaaaatttactttt 1344474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 6763479 - 6763440
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  6763479 atactccctccgtttcaaaatataagcaaattttactttt 6763440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 25378402 - 25378363
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  25378402 atactccctccgttttaaaatataagcaaattttattttt 25378363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 26059264 - 26059225
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26059264 atactccctccgtttcaaaatataagcaaattttactttt 26059225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 52222368 - 52222329
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  52222368 atactccctccattttaaaatataagcaaattttactttt 52222329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 5852684 - 5852722
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  5852684 tactccctccgtttcaaaatataagcaaattttactttt 5852722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 6763330 - 6763368
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  6763330 tacttcctccgttttaaaatataagcaaattttactttt 6763368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 21909985 - 21909947
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21909985 tactccctccgtttttaaatataagcaaattttactttt 21909947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 45242886 - 45242848
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  45242886 tactccctccgtttcaaaatataagcaaattttactttt 45242848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 46518089 - 46518051
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  46518089 tactccctccgtttcaaaatataagcaaattttactttt 46518051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 6603135 - 6603098
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttacttt 437  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  6603135 tactccctccgttttaaaatataagaaaattttacttt 6603098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 26660790 - 26660750
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  26660790 gatactctctctgttttaaaatataagcaaattttactttt 26660750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 32914202 - 32914242
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  32914202 gatactccatccgttttaaaatataagcaaattttattttt 32914242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 438
Target Start/End: Complemental strand, 5753296 - 5753265
Alignment:
Q  407 tccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||    
T  5753296 tccgttttaaaatataagcaaattttactttt 5753265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 8751427 - 8751466
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  8751427 atacttcctccgttttaaaatataagcaaattttattttt 8751466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 17988217 - 17988256
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  17988217 atactcctcccgttttaaaatataagcaaattttactttt 17988256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 26660639 - 26660678
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  26660639 atactccctccgtctcaaaatataagcaaattttactttt 26660678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 34061938 - 34061977
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  34061938 atactccctccgtttttaaatataaacaaattttactttt 34061977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 34121063 - 34121024
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  34121063 atactccatccgttttaaaatataagcaaaatttactttt 34121024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 37255121 - 37255160
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  37255121 atactccctccgttttttaatataagcaaattttactttt 37255160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 39181196 - 39181157
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  39181196 atactccctccgtatcaaaatataagcaaattttactttt 39181157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 40329017 - 40328978
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  40329017 atactccctccgtttttaaatataaacaaattttactttt 40328978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 42761378 - 42761339
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  42761378 atactccctccgttttaaaatataagtaaaatttactttt 42761339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 43147580 - 43147541
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  43147580 atactccctccgttttaaaatataagcaaaattcactttt 43147541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 46517940 - 46517979
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  46517940 atacttcctccgttttgaaatataagcaaattttactttt 46517979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 5852832 - 5852794
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  5852832 tacttcctccgttttgaaatataagcaaattttactttt 5852794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 8751576 - 8751538
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  8751576 tactccctccattttaaaatataagcaaattttattttt 8751538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 12568432 - 12568470
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  12568432 tactccctccgttttaaaatataagcaaaattcactttt 12568470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 15998207 - 15998245
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  15998207 tactccctccgtttcaaaatataagcaaaatttactttt 15998245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 17988348 - 17988310
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  17988348 tactccctccgtttcaaaatataaacaaattttactttt 17988310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 33324189 - 33324151
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  33324189 tactccctccgtctcaaaatataagcaaattttactttt 33324151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 39181045 - 39181083
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  39181045 tactccctccgtctcaaaatataagcaaattttactttt 39181083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 40341875 - 40341837
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttacttt 437  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  40341875 atactccctccgtttttaaatataaacaaattttacttt 40341837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 47011388 - 47011350
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  47011388 tactccctccatttttaaatataagcaaattttactttt 47011350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 47912716 - 47912678
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  47912716 tactccttccgttttaaaatataagcaaaatttactttt 47912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 18913626 - 18913597
Alignment:
Q  399 atactccctccgttttaaaatataagcaaa 428  Q
    ||||||||||||||||||||||||||||||    
T  18913626 atactccctccgttttaaaatataagcaaa 18913597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 24478808 - 24478771
Alignment:
Q  401 actccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  24478808 actctctccgtttttaaatataagcaaattttactttt 24478771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 31919836 - 31919873
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttacttt 437  Q
    ||||||||||||||||||||||||||||| || |||||    
T  31919836 tactccctccgttttaaaatataagcaaaattcacttt 31919873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 15998357 - 15998317
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| |||||||||||||| || ||||||    
T  15998357 gatactccctccgtttcaaaatataagcaaaattcactttt 15998317  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 428
Target Start/End: Complemental strand, 38149508 - 38149480
Alignment:
Q  400 tactccctccgttttaaaatataagcaaa 428  Q
    |||||||||||||||||||||||||||||    
T  38149508 tactccctccgttttaaaatataagcaaa 38149480  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 40328868 - 40328900
Alignment:
Q  405 cctccgttttaaaatataagcaaattttacttt 437  Q
    |||||||||| ||||||||||||||||||||||    
T  40328868 cctccgtttttaaatataagcaaattttacttt 40328900  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 410 - 438
Target Start/End: Original strand, 49363423 - 49363451
Alignment:
Q  410 gttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||||||    
T  49363423 gttttaaaatataagcaaattttactttt 49363451  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 14804308 - 14804271
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactt 436  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14804308 atactccctccgttttaaaatataagcaaattttactt 14804271  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 10731468 - 10731507
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  10731468 atactccctccgtttcaaaatataagcaaattttactttt 10731507  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 14804157 - 14804196
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  14804157 atactccctccgttttaaaatataagtaaattttactttt 14804196  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 10731617 - 10731579
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  10731617 tactccctccgtttcaaaatataagcaaattttactttt 10731579  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 11989286 - 11989248
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  11989286 tactccctccgtttcaaaatataagcaaattttactttt 11989248  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 32786260 - 32786222
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32786260 tactccctccgtttcaaaatataagcaaattttactttt 32786222  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 33169328 - 33169288
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  33169328 gatactccctccgtttctaaatataagcaaattttactttt 33169288  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 9908131 - 9908170
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  9908131 atactccctccgttccaaaatataagcaaattttactttt 9908170  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 32364161 - 32364122
Alignment:
Q  399 atactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  32364161 atactccctccgtttttaaatataagcaaaatttactttt 32364122  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 1858421 - 1858383
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  1858421 tactccctccatttttaaatataagcaaattttactttt 1858383  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 11989142 - 11989180
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  11989142 tactccctccgtctcaaaatataagcaaattttactttt 11989180  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 19687611 - 19687573
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  19687611 tactccctccgtttttaaatatatgcaaattttactttt 19687573  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 22341958 - 22341996
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  22341958 tactccctccgttttaaaatataagcaaaattcactttt 22341996  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 28648549 - 28648511
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  28648549 tactccctccgttccaaaatataagcaaattttactttt 28648511  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 17514814 - 17514851
Alignment:
Q  396 ttgatactccctccgttttaaaatataagcaaatttta 433  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  17514814 ttgatactcccttcgttttaaaatataagaaaatttta 17514851  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 32786110 - 32786150
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||| | | ||||||||||||||||||||||||    
T  32786110 gatactccctccttctcaaaatataagcaaattttactttt 32786150  T

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Target: scaffold0287 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 438
Target Start/End: Original strand, 1834 - 1869
Alignment:
Q  403 tccctccgttttaaaatataagcaaattttactttt 438  Q
    ||||||||||||||||||||||||||||||||||||    
T  1834 tccctccgttttaaaatataagcaaattttactttt 1869  T

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Target: scaffold0340 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 14177 - 14139
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  14177 tactccatccgtttcaaaatataagcaaattttactttt 14139  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 1777 - 1739
Alignment:
Q  400 tactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  1777 tactccctccgtttcaaaatataagcaaaatttactttt 1739  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Original strand, 38003 - 38036
Alignment:
Q  400 tactccctccgttttaaaatataagcaaatttta 433  Q
    ||||||||||||||| ||||||||||||||||||    
T  38003 tactccctccgtttttaaatataagcaaatttta 38036  T

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Target: scaffold0622 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 431 - 391
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||| ||||||||||||||||||||| ||||||||| ||||    
T  431 gatagtccctccgttttaaaatataaacaaattttattttt 391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 65914 - 65954
Alignment:
Q  398 gatactccctccgttttaaaatataagcaaattttactttt 438  Q
    |||||||||||||| || ||||||||||||| |||||||||    
T  65914 gatactccctccgtatttaaatataagcaaaatttactttt 65954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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