View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6132_high_22 (Length: 302)

Name: NF6132_high_22
Description: NF6132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6132_high_22
NF6132_high_22
[»] chr4 (72 HSPs)
chr4 (11-236)||(7001828-7002042)
chr4 (11-183)||(49152037-49152211)
chr4 (17-223)||(38812500-38812709)
chr4 (233-302)||(7002096-7002165)
chr4 (11-221)||(9807130-9807342)
chr4 (1-192)||(22318312-22318506)
chr4 (11-199)||(44324263-44324454)
chr4 (1-221)||(47642390-47642613)
chr4 (11-187)||(50727846-50728025)
chr4 (11-187)||(50735860-50736039)
chr4 (11-191)||(55593859-55594042)
chr4 (17-221)||(21202720-21202926)
chr4 (1-199)||(3649600-3649801)
chr4 (11-187)||(20802464-20802643)
chr4 (10-187)||(24210291-24210472)
chr4 (11-187)||(33176965-33177144)
chr4 (11-223)||(33552739-33552954)
chr4 (11-221)||(23521854-23522067)
chr4 (17-187)||(36885912-36886085)
chr4 (11-221)||(37865727-37865940)
chr4 (1-221)||(50178391-50178615)
chr4 (11-187)||(55065265-55065445)
chr4 (11-187)||(29785470-29785649)
chr4 (11-187)||(24002312-24002492)
chr4 (1-221)||(47361313-47361531)
chr4 (87-221)||(53200542-53200676)
chr4 (11-221)||(20517921-20518134)
chr4 (11-221)||(32181237-32181450)
chr4 (1-187)||(39078625-39078814)
chr4 (1-183)||(52949685-52949869)
chr4 (1-221)||(2725032-2725254)
chr4 (11-199)||(9512261-9512452)
chr4 (11-199)||(36743609-36743800)
chr4 (10-187)||(43189696-43189875)
chr4 (11-205)||(11056016-11056213)
chr4 (1-191)||(21579990-21580183)
chr4 (11-121)||(37695540-37695653)
chr4 (11-121)||(43641073-43641186)
chr4 (11-205)||(56154595-56154792)
chr4 (22-187)||(44649097-44649265)
chr4 (1-121)||(50186492-50186615)
chr4 (11-187)||(36497191-36497370)
chr4 (87-205)||(26083392-26083510)
chr4 (48-205)||(28115265-28115422)
chr4 (17-187)||(1231291-1231464)
chr4 (17-199)||(4325771-4325956)
chr4 (23-187)||(52319309-52319476)
chr4 (12-187)||(38486190-38486368)
chr4 (48-205)||(50729457-50729615)
chr4 (11-221)||(2786938-2787151)
chr4 (11-121)||(6776552-6776665)
chr4 (87-191)||(16320572-16320676)
chr4 (87-187)||(42772841-42772941)
chr4 (11-187)||(42869947-42870124)
chr4 (87-199)||(46680431-46680543)
chr4 (17-121)||(20694351-20694458)
chr4 (17-121)||(23327897-23328006)
chr4 (1-121)||(41711811-41711934)
chr4 (11-199)||(54542964-54543154)
chr4 (11-121)||(37931894-37932007)
chr4 (10-187)||(44355788-44355968)
chr4 (52-187)||(2629884-2630020)
chr4 (37-187)||(9947930-9948082)
chr4 (87-187)||(25978545-25978644)
chr4 (127-187)||(56487215-56487275)
chr4 (11-94)||(42772732-42772818)
chr4 (10-114)||(43739434-43739541)
chr4 (48-121)||(12600899-12600973)
chr4 (11-66)||(14296571-14296628)
chr4 (11-66)||(14314819-14314876)
chr4 (11-104)||(29616144-29616240)
chr4 (1-41)||(32858287-32858327)
[»] chr8 (47 HSPs)
chr8 (1-221)||(15001428-15001650)
chr8 (1-221)||(41548579-41548802)
chr8 (11-221)||(30542943-30543156)
chr8 (1-221)||(7591368-7591591)
chr8 (1-187)||(30501106-30501295)
chr8 (1-191)||(10656637-10656830)
chr8 (11-221)||(41709748-41709961)
chr8 (11-187)||(3251611-3251790)
chr8 (1-221)||(14004965-14005188)
chr8 (11-187)||(29563181-29563360)
chr8 (11-187)||(29672278-29672457)
chr8 (11-221)||(8672976-8673189)
chr8 (11-221)||(37664204-37664417)
chr8 (12-187)||(34101480-34101658)
chr8 (11-187)||(5968819-5968998)
chr8 (11-187)||(6386547-6386726)
chr8 (1-221)||(10467025-10467248)
chr8 (11-187)||(31513538-31513717)
chr8 (11-187)||(34063099-34063278)
chr8 (1-187)||(29611010-29611199)
chr8 (22-223)||(4052462-4052666)
chr8 (11-227)||(32019916-32020135)
chr8 (11-187)||(37618347-37618526)
chr8 (11-187)||(45446426-45446605)
chr8 (11-221)||(12753246-12753459)
chr8 (11-121)||(32303606-32303719)
chr8 (11-221)||(45114026-45114239)
chr8 (1-205)||(39642844-39643051)
chr8 (1-121)||(16485830-16485953)
chr8 (11-187)||(27103930-27104109)
chr8 (17-187)||(7394769-7394942)
chr8 (1-199)||(13406878-13407079)
chr8 (1-112)||(6460224-6460337)
chr8 (1-114)||(10320305-10320421)
chr8 (64-187)||(22756366-22756489)
chr8 (1-187)||(22999218-22999408)
chr8 (10-120)||(16595171-16595284)
chr8 (17-197)||(17805667-17805851)
chr8 (11-221)||(25478214-25478427)
chr8 (11-121)||(31732035-31732148)
chr8 (48-187)||(37861869-37862009)
chr8 (10-187)||(54141-54320)
chr8 (48-121)||(21272694-21272768)
chr8 (87-120)||(17520645-17520678)
chr8 (1-187)||(35225623-35225812)
chr8 (165-205)||(32303545-32303585)
chr8 (99-187)||(37474762-37474850)
[»] chr3 (46 HSPs)
chr3 (11-205)||(49748827-49749024)
chr3 (1-186)||(34351303-34351491)
chr3 (1-199)||(39052760-39052961)
chr3 (1-221)||(50386356-50386579)
chr3 (1-197)||(34026629-34026828)
chr3 (11-187)||(3864609-3864787)
chr3 (11-223)||(29584847-29585062)
chr3 (1-187)||(31882956-31883145)
chr3 (11-187)||(28675762-28675941)
chr3 (1-205)||(33364694-33364901)
chr3 (11-183)||(51925146-51925321)
chr3 (11-221)||(2135042-2135255)
chr3 (11-221)||(12349071-12349284)
chr3 (19-187)||(25927261-25927432)
chr3 (9-205)||(3964259-3964457)
chr3 (48-205)||(21373941-21374099)
chr3 (1-187)||(3867583-3867772)
chr3 (1-187)||(20609582-20609771)
chr3 (17-187)||(38213332-38213505)
chr3 (17-187)||(42636337-42636510)
chr3 (11-121)||(54622796-54622909)
chr3 (10-183)||(51296552-51296728)
chr3 (11-223)||(21221259-21221473)
chr3 (11-187)||(51259714-51259893)
chr3 (11-221)||(1344607-1344820)
chr3 (11-121)||(4851456-4851569)
chr3 (11-121)||(26282387-26282500)
chr3 (11-221)||(40094475-40094688)
chr3 (10-183)||(44000232-44000408)
chr3 (11-187)||(47958366-47958545)
chr3 (11-187)||(53557729-53557908)
chr3 (87-221)||(24571332-24571466)
chr3 (17-187)||(25860355-25860528)
chr3 (20-199)||(29646047-29646229)
chr3 (48-199)||(24721496-24721648)
chr3 (11-187)||(20255017-20255195)
chr3 (11-187)||(44116911-44117090)
chr3 (87-205)||(19906813-19906931)
chr3 (10-121)||(28624920-28625033)
chr3 (1-186)||(22484678-22484866)
chr3 (95-221)||(41682953-41683079)
chr3 (1-200)||(50678758-50678962)
chr3 (2-95)||(25395577-25395673)
chr3 (1-66)||(25954413-25954479)
chr3 (1-42)||(10747179-10747220)
chr3 (1-42)||(41694983-41695024)
[»] chr5 (40 HSPs)
chr5 (2-221)||(39918469-39918691)
chr5 (11-221)||(2351651-2351864)
chr5 (11-221)||(32528686-32528899)
chr5 (1-205)||(4689626-4689833)
chr5 (11-199)||(41459560-41459750)
chr5 (11-187)||(8136810-8136987)
chr5 (11-189)||(34794858-34795039)
chr5 (1-187)||(28090466-28090655)
chr5 (11-205)||(8560910-8561106)
chr5 (11-223)||(31770501-31770716)
chr5 (1-187)||(3735318-3735507)
chr5 (1-199)||(31880010-31880211)
chr5 (1-191)||(39788153-39788347)
chr5 (11-197)||(553367-553557)
chr5 (11-121)||(24036201-24036314)
chr5 (17-187)||(35701254-35701427)
chr5 (11-221)||(40489308-40489521)
chr5 (11-158)||(5571619-5571767)
chr5 (11-187)||(4818086-4818265)
chr5 (20-187)||(7523152-7523322)
chr5 (1-187)||(7770225-7770414)
chr5 (1-187)||(18470374-18470563)
chr5 (17-187)||(21739107-21739280)
chr5 (11-207)||(6284224-6284424)
chr5 (11-187)||(41790409-41790587)
chr5 (11-106)||(7725836-7725934)
chr5 (11-221)||(11963312-11963525)
chr5 (1-187)||(31644407-31644595)
chr5 (11-187)||(24181570-24181749)
chr5 (11-121)||(7208242-7208355)
chr5 (17-121)||(22493431-22493537)
chr5 (11-121)||(40182435-40182548)
chr5 (11-200)||(23091237-23091429)
chr5 (15-187)||(17031132-17031307)
chr5 (54-186)||(700548-700681)
chr5 (11-121)||(29241349-29241462)
chr5 (87-121)||(5673189-5673223)
chr5 (87-187)||(27839020-27839119)
chr5 (48-113)||(32093001-32093067)
chr5 (1-41)||(35954974-35955014)
[»] chr6 (40 HSPs)
chr6 (11-187)||(3259654-3259833)
chr6 (11-199)||(3932774-3932965)
chr6 (11-199)||(10324078-10324269)
chr6 (1-187)||(24242625-24242814)
chr6 (64-199)||(18597125-18597260)
chr6 (11-187)||(24203334-24203512)
chr6 (11-121)||(14808046-14808158)
chr6 (1-187)||(166902-167091)
chr6 (11-221)||(14925401-14925614)
chr6 (17-121)||(34684028-34684136)
chr6 (11-187)||(10485128-10485307)
chr6 (11-221)||(11613736-11613949)
chr6 (1-187)||(15277259-15277448)
chr6 (11-121)||(31870145-31870258)
chr6 (1-187)||(32409831-32410020)
chr6 (11-187)||(2614867-2615046)
chr6 (11-187)||(10959971-10960150)
chr6 (11-187)||(15276916-15277095)
chr6 (11-187)||(17867806-17867985)
chr6 (11-187)||(17877589-17877768)
chr6 (11-187)||(18057490-18057669)
chr6 (11-187)||(32132359-32132538)
chr6 (11-187)||(34176801-34176980)
chr6 (20-187)||(8177861-8178030)
chr6 (12-187)||(11279100-11279278)
chr6 (16-112)||(11382040-11382139)
chr6 (11-215)||(17443233-17443440)
chr6 (11-121)||(3290643-3290754)
chr6 (12-187)||(9613946-9614124)
chr6 (85-199)||(11675341-11675455)
chr6 (20-205)||(3379690-3379878)
chr6 (1-205)||(9902619-9902827)
chr6 (87-221)||(9200332-9200467)
chr6 (10-187)||(29054327-29054506)
chr6 (5-102)||(27756270-27756370)
chr6 (12-120)||(11212229-11212340)
chr6 (48-121)||(4494160-4494234)
chr6 (272-302)||(29036349-29036379)
chr6 (168-221)||(14925162-14925215)
chr6 (128-192)||(5650679-5650742)
[»] chr1 (59 HSPs)
chr1 (11-221)||(39281874-39282087)
chr1 (11-187)||(49303369-49303547)
chr1 (1-223)||(42512749-42512974)
chr1 (11-199)||(16386834-16387025)
chr1 (11-223)||(24339617-24339831)
chr1 (11-221)||(844705-844918)
chr1 (11-221)||(6711027-6711240)
chr1 (11-187)||(17887927-17888107)
chr1 (11-221)||(26118196-26118409)
chr1 (11-221)||(31004112-31004325)
chr1 (11-187)||(16437342-16437521)
chr1 (11-187)||(45490890-45491069)
chr1 (1-220)||(6029283-6029505)
chr1 (11-218)||(7183898-7184108)
chr1 (11-221)||(16451107-16451320)
chr1 (11-221)||(42510505-42510718)
chr1 (11-187)||(35387326-35387505)
chr1 (17-187)||(41972898-41973070)
chr1 (9-222)||(13994055-13994270)
chr1 (11-187)||(28340318-28340497)
chr1 (17-221)||(41967830-41968037)
chr1 (19-221)||(1351416-1351621)
chr1 (1-187)||(6144001-6144190)
chr1 (17-187)||(30105695-30105868)
chr1 (11-221)||(51264475-51264688)
chr1 (1-221)||(15539871-15540094)
chr1 (1-121)||(38663102-38663225)
chr1 (1-221)||(50304621-50304844)
chr1 (1-196)||(50382406-50382607)
chr1 (11-221)||(32270333-32270546)
chr1 (17-205)||(1601159-1601348)
chr1 (12-121)||(25539836-25539948)
chr1 (2-187)||(32289359-32289547)
chr1 (48-199)||(5109748-5109899)
chr1 (11-187)||(12890218-12890397)
chr1 (87-205)||(7837192-7837310)
chr1 (12-221)||(11772613-11772825)
chr1 (18-187)||(16704713-16704885)
chr1 (12-221)||(45658802-45659014)
chr1 (11-187)||(16476170-16476349)
chr1 (85-215)||(3560137-3560267)
chr1 (11-121)||(44738123-44738235)
chr1 (1-41)||(47093006-47093046)
chr1 (23-220)||(39792800-39792999)
chr1 (11-187)||(50540324-50540503)
chr1 (2-134)||(2761624-2761758)
chr1 (48-121)||(26764876-26764950)
chr1 (10-102)||(33316397-33316491)
chr1 (13-187)||(570368-570548)
chr1 (11-121)||(10384347-10384460)
chr1 (1-111)||(39738928-39739041)
chr1 (1-107)||(46154870-46154979)
chr1 (87-207)||(7837433-7837553)
chr1 (2-42)||(30798854-30798894)
chr1 (17-113)||(34663913-34664012)
chr1 (48-114)||(40610741-40610808)
chr1 (17-121)||(42705319-42705426)
chr1 (12-183)||(17327668-17327842)
chr1 (85-121)||(23799618-23799654)
[»] chr2 (48 HSPs)
chr2 (11-187)||(3913400-3913579)
chr2 (11-221)||(9732836-9733049)
chr2 (11-187)||(32766444-32766624)
chr2 (1-221)||(33889204-33889427)
chr2 (11-187)||(33366581-33366760)
chr2 (17-221)||(35114762-35114969)
chr2 (10-205)||(41934551-41934749)
chr2 (1-221)||(7761479-7761702)
chr2 (17-187)||(30798428-30798602)
chr2 (11-221)||(34338781-34338994)
chr2 (11-187)||(5278774-5278953)
chr2 (11-192)||(7258867-7259052)
chr2 (11-187)||(12672414-12672593)
chr2 (11-187)||(32497886-32498065)
chr2 (11-199)||(44284600-44284791)
chr2 (1-187)||(19513629-19513818)
chr2 (11-121)||(37003874-37003987)
chr2 (11-221)||(42365548-42365761)
chr2 (56-187)||(26981649-26981781)
chr2 (11-187)||(16104245-16104424)
chr2 (1-205)||(40832391-40832600)
chr2 (1-187)||(41366050-41366237)
chr2 (20-187)||(42706339-42706509)
chr2 (11-221)||(18685807-18686020)
chr2 (11-187)||(2645027-2645205)
chr2 (1-218)||(6896129-6896349)
chr2 (54-221)||(37308671-37308839)
chr2 (87-187)||(38623244-38623344)
chr2 (1-187)||(30712818-30713010)
chr2 (11-205)||(10399792-10399989)
chr2 (64-192)||(15303175-15303303)
chr2 (11-187)||(17540685-17540865)
chr2 (15-121)||(45463116-45463224)
chr2 (10-221)||(38992977-38993191)
chr2 (11-121)||(2086043-2086156)
chr2 (1-205)||(4641477-4641682)
chr2 (20-121)||(12939306-12939410)
chr2 (17-113)||(26418900-26418999)
chr2 (17-121)||(9717201-9717308)
chr2 (1-121)||(13829399-13829522)
chr2 (85-121)||(27462808-27462844)
chr2 (11-187)||(30326272-30326450)
chr2 (10-50)||(25383101-25383142)
chr2 (5-112)||(38786544-38786653)
chr2 (165-221)||(9717329-9717385)
chr2 (85-121)||(28824563-28824599)
chr2 (165-221)||(37003797-37003853)
chr2 (87-135)||(40767207-40767255)
[»] chr7 (53 HSPs)
chr7 (1-199)||(1870099-1870301)
chr7 (11-199)||(21784846-21785037)
chr7 (11-221)||(10932464-10932677)
chr7 (1-187)||(29661288-29661477)
chr7 (1-187)||(18386490-18386678)
chr7 (17-223)||(44748676-44748885)
chr7 (11-221)||(41211107-41211321)
chr7 (11-187)||(36769510-36769689)
chr7 (1-221)||(43368166-43368389)
chr7 (11-187)||(47953165-47953344)
chr7 (1-187)||(38301308-38301496)
chr7 (11-187)||(11321826-11322005)
chr7 (11-187)||(40753130-40753309)
chr7 (1-187)||(329435-329624)
chr7 (11-221)||(26994132-26994345)
chr7 (11-183)||(3922648-3922823)
chr7 (11-187)||(43158627-43158806)
chr7 (11-187)||(18470659-18470836)
chr7 (11-187)||(9913500-9913678)
chr7 (11-187)||(9927188-9927366)
chr7 (1-121)||(23349298-23349421)
chr7 (11-187)||(26371750-26371929)
chr7 (1-121)||(26652831-26652954)
chr7 (11-187)||(46633672-46633846)
chr7 (11-187)||(47316639-47316818)
chr7 (9-189)||(21408566-21408747)
chr7 (11-186)||(30849188-30849366)
chr7 (1-183)||(30598953-30599138)
chr7 (11-121)||(32873776-32873889)
chr7 (54-121)||(43189249-43189317)
chr7 (1-121)||(34295411-34295534)
chr7 (11-121)||(3892033-3892146)
chr7 (1-104)||(37966939-37967045)
chr7 (11-121)||(34117427-34117540)
chr7 (11-121)||(46448651-46448764)
chr7 (20-121)||(22631722-22631826)
chr7 (1-113)||(15035268-15035383)
chr7 (11-111)||(17237051-17237154)
chr7 (1-121)||(43213932-43214055)
chr7 (10-114)||(48699372-48699479)
chr7 (1-187)||(22723973-22724162)
chr7 (11-121)||(46408864-46408977)
chr7 (2-42)||(3359930-3359970)
chr7 (87-183)||(11250671-11250767)
chr7 (10-187)||(22724472-22724652)
chr7 (87-223)||(34519562-34519698)
chr7 (11-111)||(48894692-48894795)
chr7 (9-100)||(21408328-21408422)
chr7 (64-114)||(35645478-35645528)
chr7 (10-140)||(29372767-29372900)
chr7 (1-42)||(44668772-44668813)
chr7 (11-97)||(47947735-47947824)
chr7 (153-213)||(16027842-16027902)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-187)||(1589-1778)
[»] scaffold0169 (2 HSPs)
scaffold0169 (1-187)||(18000-18189)
scaffold0169 (1-121)||(12548-12671)
[»] scaffold0054 (1 HSPs)
scaffold0054 (11-187)||(23548-23725)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-205)||(5367-5575)
[»] scaffold0181 (1 HSPs)
scaffold0181 (11-187)||(19038-19215)
[»] scaffold0360 (2 HSPs)
scaffold0360 (1-121)||(15393-15512)
scaffold0360 (9-178)||(13534-13706)
[»] scaffold0004 (1 HSPs)
scaffold0004 (11-121)||(372976-373089)
[»] scaffold0957 (1 HSPs)
scaffold0957 (17-227)||(2402-2614)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-187)||(2284-2473)
[»] scaffold0014 (1 HSPs)
scaffold0014 (11-121)||(101920-102033)
[»] scaffold0050 (1 HSPs)
scaffold0050 (10-187)||(42896-43075)
[»] scaffold0729 (1 HSPs)
scaffold0729 (11-121)||(4591-4704)
[»] scaffold0155 (1 HSPs)
scaffold0155 (2-140)||(33538-33678)
[»] scaffold0027 (1 HSPs)
scaffold0027 (87-187)||(15222-15322)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-121)||(51400-51522)
[»] scaffold0021 (2 HSPs)
scaffold0021 (2-72)||(111136-111206)
scaffold0021 (2-42)||(108396-108436)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-221)||(13599-13822)
[»] scaffold0062 (1 HSPs)
scaffold0062 (2-42)||(3722-3762)
[»] scaffold0047 (1 HSPs)
scaffold0047 (87-187)||(19102-19202)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 9e-70; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 7001828 - 7002042
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggacaaatgttattttggtatttagataacttatacgtagaataaaaagttgtgttgtggtttggt 109  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  7001828 attgaataatttttggtcttatacgatttttggtggacaaatgttattttggtatttagacaacttatacatagaacaaaaagttgtgttgtggtttggt 7001927  T
Q  110 gaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatca 209  Q
    ||||| |||||| |||| |||||||  ||||| | |||||||||||||||||||||||            ||||||||||||||||||||||||||||||    
T  7001928 gagggacaaaaatttttgtttttgttctgtctcttgcctcgagtttgtcttatctctg------------aaatcaaatactaaacaacttaagttatca 7002015  T
Q  210 tgtcctgtcctttaatttgtaagttag 236  Q
    |||||||||||||||||||||||||||    
T  7002016 tgtcctgtcctttaatttgtaagttag 7002042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 49152211 - 49152037
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggacaaa-tgttattttggtatttagataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||| ||||||||||| |||||||||||||| |||||||| |||||||||||| |||||| ||||| ||||| | ||||||||||||||||||||||||    
T  49152211 attgagtaattttttgttttatacgatttttgatggacaaaatgttattttggtttttagacaacttgtacgtgggataaaaagttgtgttgtggtttgg 49152112  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    |||||| ||||||  |   |||||||||||||  | || || |||||||||| |  |||||||||||||||||||    
T  49152111 tgagggacaaaaatatgagtttttgtcgtgtcccttgcatccagtttgtcttgtacctgaaacagttttacaaat 49152037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 38812500 - 38812709
Alignment:
Q  17 taattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| |||   ||||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||||||||    
T  38812500 taattttttgttttatacgatttttgcggaacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagg 38812599  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtc 213  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| | |||||    
T  38812600 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttatgtc 38812699  T
Q  214 ctgtccttta 223  Q
    ||||||||||    
T  38812700 ctgtccttta 38812709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 7002096 - 7002165
Alignment:
Q  233 ttagacatacctagaaaactaataacctgttagttttcatagttagtactccctccgtccctatatataa 302  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7002096 ttagacatacctagaaaactaataaactgttagttttcatagttagtactccctccgtccctatatataa 7002165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 9807130 - 9807342
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| ||||||||||||||  |||| ||||| ||||||||||||| ||| ||||| ||||||| | ||||||||||  |||||||||    
T  9807130 attgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttg 9807229  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||  |||||| ||   |||||||| |||| || || || |||||||||| |  ||||||||||||||||||||||| |||  |||||| ||||| |    
T  9807230 gtgagga-caaaaagttgagtttttgtcctgtccattgcatctagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 9807328  T
Q  208 catgtcctgtcctt 221  Q
    | |||||| |||||    
T  9807329 cctgtcctatcctt 9807342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 22318506 - 22318312
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg--tggacaaatgttattttggt-atttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| |||||||||||||| |||| ||||| ||||||||  ||   |||||||||||||||  |||||| ||||| ||||||  | |||||||||||    
T  22318506 tttttatgatattgaataatttcttgttttatatgatttttggatgacaaaatgttattttggtgttttagacaacttctacgtaagacaaaaagttgtg 22318407  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatacta 192  Q
    ||||||||||||||||| |||||| ||  | ||||||| ||||| | ||||  |||||||  | || || |||||||||||||||||||| ||||    
T  22318406 ttgtggtttggtgagggacaaaaatttcaaattttgtcctgtctcttgccttcagtttgttctgtccctaaaacagttttacaaatcaaacacta 22318312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 44324454 - 44324263
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtatttagat-aacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || || ||||| |||||||||||||| |  ||||| ||||| | | ||||||||||| |||||||||    
T  44324454 attgaataattttttgttttatacgatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgctgtggtttg 44324355  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| ||||||  |   ||||||||  |||| | ||||| |||||||| | |  ||||||||||||||||||||||| ||| |||||||    
T  44324354 gtgagggacaaaaatatcagtttttgtcccgtcttttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaact 44324263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 47642613 - 47642390
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||    
T  47642613 tttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 47642514  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    |||||||||| |||||| ||||||  |   ||||| || ||||| |  |||| |||||||| | |  ||||||||||||||||||||||| ||| |||||    
T  47642513 ttgtggtttgctgagggacaaaaatatcagtttttatcttgtctcttacctccagtttgtcctgtgcctgaaacagttttacaaatcaaacactgaacaa 47642414  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  47642413 ctggagttgttctgtcctgtcctt 47642390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 50728025 - 50727846
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  50728025 attgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 50727926  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   |||||||| ||||  | ||||  |||||||| | |  |||||||||||||||||||||||    
T  50727925 atgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaa 50727846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 50736039 - 50735860
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  50736039 attgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 50735940  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   |||||||| ||||  | ||||  |||||||| | |  |||||||||||||||||||||||    
T  50735939 atgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaa 50735860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 55593859 - 55594042
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | ||||||||||||| |||||||||    
T  55593859 attgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttg 55593958  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatact 191  Q
    ||||||| | ||||  |   |||||||| ||||  | ||||| ||||| || | |  |||||||||||||||||||||||||||    
T  55593959 gtgagggactaaaatatgagtttttgtcctgtcccttgcctccagtttatcatgtacctgaaacagttttacaaatcaaatact 55594042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 21202720 - 21202926
Alignment:
Q  17 taattttttgtcttatacgatttttgtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggg 114  Q
    ||||||||||| |||||||||||||| ||||||| || ||||||| ||||| ||| ||||| ||||| | | ||||||||||||||||||||||||||||    
T  21202720 taattttttgttttatacgatttttggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaggg 21202819  T
Q  115 gcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtcc 214  Q
     |||||   |   |||||||| ||||| | ||||| |||||||| | |  || |||||||||||||||||||| |||  ||||||  |||| |  |||||    
T  21202820 acaaaattatgagtttttgtcctgtctcttgcctccagtttgtcctgtaccttaaacagttttacaaatcaaacactggacaactagagttgttctgtcc 21202919  T
Q  215 tgtcctt 221  Q
    |||||||    
T  21202920 tgtcctt 21202926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3649600 - 3649801
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| | |||||| || || ||||||||||||||| ||| ||| ||||| ||||| | | |||||||||||    
T  3649600 tttttatggtattgaataatttcttgttttatatgttttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtg 3649699  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||||| |||||| |||  |||||||| ||||  | ||||  |||||||  | || ||||||||||||||||||||||| |||| ||||    
T  3649700 ctgtggtttggtgagggacaaaaattttagtttttgtcctgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatcaaacactagacaa 3649799  T
Q  198 ct 199  Q
    ||    
T  3649800 ct 3649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 20802643 - 20802464
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  20802643 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttg 20802544  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||||||    
T  20802543 gtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 20802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 24210291 - 24210472
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttgtgg---acaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtt 105  Q
    |||||| ||||||||||| |||||||||||||| ||   | ||||| ||||||||||||| ||| ||||| ||||| | ||||||||||||| |||||||    
T  24210291 tattgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtt 24210390  T
Q  106 tggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||| ||| ||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  24210391 tggtgagggacaataatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 24210472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 33177144 - 33176965
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||| ||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| | ||| | | |||||||||||||||||||||    
T  33177144 attgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtgcgtgggacaaaaagttgtgttgtggtttg 33177045  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  33177044 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 33176965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 33552954 - 33552739
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  33552954 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 33552855  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | || || | |||||| | |  ||||||||||||||||||||||| ||| |||||||  |||| |    
T  33552854 gtgagggacaaaaatatgagtttttgtcttgtcccttgcatccaatttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgt 33552755  T
Q  208 catgtcctgtccttta 223  Q
      ||||||||||||||    
T  33552754 tttgtcctgtccttta 33552739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 23521854 - 23522067
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  23521854 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 23521953  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| | ||  | || || |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  23521954 gtgagggacaaaaatatgagtttttgtcctatcccttgcttccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 23522053  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  23522054 tttgtcctgtcctt 23522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 36885912 - 36886085
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||| ||||||| ||| || || ||||| | ||||||||||||| |||||||||||||||    
T  36885912 taattttttgttttatacgatttttgagggacaaaatgctatttaggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggtgagg 36886011  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||||| |  |||||||||||||||||||||||    
T  36886012 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 36886085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 37865727 - 37865940
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||| || || ||||| || ||||||||||||| ||| ||||| ||| | | | |||||||||||||||| ||||    
T  37865727 attgaataattttttgttttatacgatttctgagggacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtgatttg 37865826  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||| | ||||| || ||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  37865827 gtgagggacaaaaatatgagtttttgtcatgtctcttgcctccagattgtcatgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 37865926  T
Q  208 catgtcctgtcctt 221  Q
     ||||| |||||||    
T  37865927 tatgtcgtgtcctt 37865940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 50178615 - 50178391
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaa-gttgt 96  Q
    ||||||| | ||||||||||||||||| |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | ||||| |||||    
T  50178615 tttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaaagttgt 50178516  T
Q  97 gttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaaca 196  Q
    | ||||||||| |||||  ||||||  |   |||||||| ||||| | ||||| |||||||| | |  ||||||||||||||||||||||| |||  |||    
T  50178515 gctgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggaca 50178416  T
Q  197 acttaagttatcatgtcctgtcctt 221  Q
    ||| ||||| |  ||||||||||||    
T  50178415 actgaagttgttctgtcctgtcctt 50178391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 55065445 - 55065265
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  55065445 attgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 55065346  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgt-ctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||| |  || |||| |||||||||| |  |||||||||||||||||||||||    
T  55065345 gtgagggacaaaaatatgagtttttgtcctgtcccttgccctccagtttgtcttgtacctgaaacagttttacaaatcaaa 55065265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 29785649 - 29785470
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||| ||||||||||||||    
T  29785649 attgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagctgtgttgtggtttg 29785550  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||  ||||  | | ||| |||||||| | |  |||||||||||||||||||||||    
T  29785549 gtgagggacaaaaatatgagtttttgttctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaa 29785470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 24002312 - 24002492
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg---acaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||| ||||||||||| |||||||||||||| ||   | ||||| ||||||||||||| ||| ||||| ||||| | | ||||||||||| ||||||||    
T  24002312 attgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggttt 24002411  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||| |||||||||||||||    
T  24002412 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaactgttttacaaatcaaa 24002492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 47361531 - 47361313
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacga-tttttgtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| ||||||| ||||||||||| |||||||| |||||  ||||||| || ||||||||||||| ||| |||||    || | | |||||||||||    
T  47361531 tttttatgatattgagtaattttttgttttatacgaatttttagggacaaaatgctattttggtattttagacaactt----gttggacaaaaagttgtg 47361436  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    ||||||||||||||||| |||||| | | | ||||||| ||||  | |||||  ||||||| | |  ||||||||||||||||||||||| |||  ||||    
T  47361435 ttgtggtttggtgagggacaaaaa-tatgaattttgtcttgtcccttgcctccggtttgtcctgtacctgaaacagttttacaaatcaaacactggacaa 47361337  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    || ||||| |  ||||||||||||    
T  47361336 ctaaagttgttctgtcctgtcctt 47361313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 53200676 - 53200542
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| |||||||||||||||| |||||| ||   |||||||| |||   | ||||| ||||| || | |||||||||||||||| ||||||||    
T  53200676 aaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcatgttccttgcctccagtttatcctgtctctgaaacagttttgcaaatcaa 53200577  T
Q  187 atactaaacaacttaagttatcatgtcctgtcctt 221  Q
    | |||||||| || ||||||| ||||| |||||||    
T  53200576 acactaaacagctgaagttattatgtcttgtcctt 53200542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 20518134 - 20517921
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||  ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | || ||||| || |||| ||||    
T  20518134 attgagtaattttttgttttatagaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaagaagttatgctgtgatttg 20518035  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||| | ||||| |||||||||| |  ||||||||||||||||||||||| ||| |||||||  |||| |    
T  20518034 gtgagggacaaaaatatgactttttgtcctgtctcttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactgaacaactagagttgt 20517935  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  20517934 tctgtcctgtcctt 20517921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 32181237 - 32181450
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| |||||| ||||||| || || ||||| ||||||||||||| ||| ||||| ||||| | | ||||||||||  |||||||||    
T  32181237 attgaataattttatgttttatactatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttg 32181336  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | || || |||||||| | |   |||||||||||||||||||||| |||  |||||| ||||| |    
T  32181337 gtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtacttgaaacagttttacaaatcaaacactggacaactaaagttgt 32181436  T
Q  208 catgtcctgtcctt 221  Q
    |||||||| |||||    
T  32181437 catgtcctatcctt 32181450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 39078625 - 39078814
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| || | ||||| |||||||| || ||||| |||||||||||| ||| ||| ||||  ||||||| | ||||| |||||    
T  39078625 tttttatggtattgaataatttcttattttatatgatttttgggggacaaaatgttattttggtgttttagacaactcgtacgtaggacaaaaatttgtg 39078724  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||||||||| |||||| ||    ||||||| | ||| | ||||| |||||||  | || |||||||||||||||||||||||    
T  39078725 ttgtggtttggtgagggacaaaaatttcaggttttgtcctatctcttgcctccagtttgttctgtccctgaaacagttttacaaatcaaa 39078814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 52949685 - 52949869
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | |||||||||||||| || |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||    
T  52949685 tttttatgacattgaataattttt-gttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 52949783  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    |||||||||| |||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||    
T  52949784 ttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaat 52949869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 2725254 - 2725032
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||  |||||||||||    
T  2725254 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggac-aaaaagttgtg 2725156  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  || ||| |||||||||||||||| |||  ||||    
T  2725155 atgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctaaaagagttttacaaatcaaacactggacaa 2725056  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  2725055 ctagagttgttctgtcctgtcctt 2725032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 9512452 - 9512261
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  9512452 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 9512353  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    |||| || ||||||  |   |||||||| |||   | ||||| ||||| |||| |  ||||||||||||||||||||||| ||| |||||||    
T  9512352 gtgaaggacaaaaatatgagtttttgtcctgttacttgcctccagtttatcttgtacctgaaacagttttacaaatcaaacactgaacaact 9512261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 36743800 - 36743609
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| |||||| |||| |||||| ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| ||| |||||    
T  36743800 attgagtaatttgttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttg 36743701  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| ||||||  |  ||||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||| ||||| ||| |||||||    
T  36743700 gtgagggacaaaaatatgaatttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaattcaaacactgaacaact 36743609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 43189875 - 43189696
Alignment:
Q  10 tattgaataattttttgtcttatacgat-ttttgtggacaa-atgttattttggtatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||||||||||||||||| ||| |||||||| | |||||||| |||||||||||||||  |  | | | ||||| |||||| |||||||     
T  43189875 tattgaataattttttgtcttatacgatatttagtggacaataagttatttttgtatttagataacttgcatttgggacaaaaacttgtgtcgtggttta 43189776  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||   ||||||||| | |||||||| ||||  | ||||  |||||||| ||| ||  ||||| ||||||||||||||    
T  43189775 gtgagacacaaaaaattatgtttttgtcttgtcccttgccttcagtttgtcatatttcaaaaacaattttacaaatcaaa 43189696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 11056016 - 11056213
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattta-gataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || || |||||||||||||||||||  || ||  | ||| | | | | |||||||||||||||||||    
T  11056016 attgaataattttttgttttatacgatttttgaggcacgaaatgttattttggtatttttgacaatctgtacatgggacataaagttgtgttgtggtttg 11056115  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    || |||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  |||||| |||||    
T  11056116 gtaagggacaaaaatatcagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagtt 11056213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 21579990 - 21580183
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaa-atgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||| |||||||| || |||||||||||||| || |||| ||| ||||||||||||| ||| || || |||||   | |||||||||||    
T  21579990 tttttatggtattgagtaatttttagttttatacgatttttgagggacaacatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtg 21580089  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatact 191  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | |  |||||||||||||||||||||||||||    
T  21580090 atgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaatact 21580183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 37695653 - 37695540
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||| | |||| ||||||||||||| || |||||| ||| | ||||| | | |||||||||||||||||||||    
T  37695653 attgaataattttttgttttatacgatttttgggggacgaaatgttattttgatattttagacaacctgtacgtgggacaaaaagttgtgttgtggtttg 37695554  T
Q  108 gtgaggggcaaaaa 121  Q
     |||||| ||||||    
T  37695553 atgagggacaaaaa 37695540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 43641073 - 43641186
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  43641073 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 43641172  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  43641173 gtgagggacaaaaa 43641186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 56154595 - 56154792
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  56154595 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 56154694  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    ||||||| ||||||  |   |||||||  ||||  | ||||| ||||| || | |  ||||||||||||||||||||||| |||  |||||| |||||    
T  56154695 gtgagggacaaaaatatgagtttttgttctgtcccttgcctccagtttttcctgtacctgaaacagttttacaaatcaaacactggacaactaaagtt 56154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 44649265 - 44649097
Alignment:
Q  22 ttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaa 118  Q
    |||||| |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| ||| | | | ||||||||||||||||||||| |||||| |||    
T  44649265 ttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaa 44649166  T
Q  119 aaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||||||    
T  44649165 aaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 44649097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50186492 - 50186615
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||| | |||||||||||||| ||    ||||| |||||| |||||| ||| ||||| || || | |||||||||||||    
T  50186492 tttttatgacattgaataattttttattttatacgatttttggggtgcgaaatgctatttttgtattttagacaacttgtatgtgggataaaaagttgtg 50186591  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
    ||||||||||||||||| ||||||    
T  50186592 ttgtggtttggtgagggacaaaaa 50186615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 36497191 - 36497370
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-aca-aatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||| | |||||||||||||| || ||| |||| ||||||| ||||| ||| ||||| || || | | ||||||||||| |||||||||    
T  36497191 attgagtaattttttattttatacgatttttgagggacagaatgctattttgatattttagacaacttgtatgttggacaaaaagttgtgatgtggtttg 36497290  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||| | | ||| |||||||| | |  |||||||||||||||||||||||    
T  36497291 gtgagggacaaaaatatgagtttttgtcctgtctcttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaa 36497370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 26083392 - 26083510
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||||||| || |||||||||||||||| |||||| ||   |||||||| ||||  | ||||| |||||||  | || |||||||| |||||||||||||    
T  26083392 aaaaagttatgctgtggtttggtgagggacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaa 26083491  T
Q  187 atactaaacaacttaagtt 205  Q
    | ||||||||||| |||||    
T  26083492 acactaaacaactgaagtt 26083510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 28115265 - 28115422
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggc 146  Q
    ||||| ||||||||||||| ||| ||||| || || | | |||||||||||||||||||||||||||| ||||||  |  |||||| || ||||  | ||    
T  28115265 aaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcaatttttctcctgtcccttgc 28115364  T
Q  147 ctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    ||| |||||||||| |  |  |||||||||||||||||||| |||| ||||||| ||||    
T  28115365 ctccagtttgtcttgt-accaaaacagttttacaaatcaaacactagacaacttgagtt 28115422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 1231291 - 1231464
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    |||| |||||| |||||||||||||| || ||||| |||||||||| ||||| ||| ||||| ||||| | | ||||||||||| |||||||| ||||||    
T  1231291 taatattttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagg 1231390  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   ||||||||  |||| | ||||| ||||| || | |  |||||||||||||||||||||||    
T  1231391 gacaaaaatatgagtttttgtccagtctcttgcctccagtttatcctgtacctgaaacagttttacaaatcaaa 1231464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 4325771 - 4325956
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||| ||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||| ||||| |||||     
T  4325771 taattttttgttttatgcgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgcggttttgtgaga 4325870  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    | ||||||  |   ||||| || ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| ||| |||||||    
T  4325871 gacaaaaatatgagtttttctcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacactgaacaact 4325956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 187
Target Start/End: Original strand, 52319309 - 52319476
Alignment:
Q  23 tttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaa 119  Q
    ||||| |||||||||||||| || ||||| ||||||||||  |||| ||| ||||| ||||| | | ||||||||||| |||||||||||||||| ||||    
T  52319309 tttgttttatacgatttttgagggacaaaatgttattttgacattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaa 52319408  T
Q  120 aaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||  |   |||| ||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  52319409 aatatgagttttcgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 52319476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 38486368 - 38486190
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||| ||||||||||| |||||| ||||||| || ||||| || ||||||| ||||| ||| ||||| |||||   | ||||||||||| ||||||||||    
T  38486368 ttgagtaattttttgttttatactatttttgagggacaaaatgctattttgatattttagacaacttgtacgttagacaaaaagttgtgctgtggtttgg 38486269  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||| ||||||  |   |||||||| ||||  | ||||| ||||| || | |  |||||||||||||||||||||||    
T  38486268 tgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttatcctgtacctgaaacagttttacaaatcaaa 38486190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 50729615 - 50729457
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggc 146  Q
    ||||| ||||||||||||| ||| ||||| |||||   | ||||||||||| |||||||||||||  | |||||| ||   |||||||| ||||  | ||    
T  50729615 aaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtcatgtcccttgc 50729516  T
Q  147 ctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    ||| |||||||  | || ||||||||||||||||||||||| |||  |||||| |||||    
T  50729515 ctccagtttgttctgtccctgaaacagttttacaaatcaaacactggacaactgaagtt 50729457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 2786938 - 2787151
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttgg-tatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||| ||||||| | |||| |||||||||||||| | ||||||||| || ||||| | | ||||| ||||| ||||||||     
T  2786938 attgaataattttttgttttataagatttttgggggacgaaatgttattttggatttttagataatttgtacgtgggacaaaaatttgtgatgtggttta 2787037  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    |||| || ||||||  |   |||||||| ||||  | || || |||||||  | |  |||||||| |||||||||||||| |||| ||||||  |||| |    
T  2787038 gtgaaggacaaaaatatgagtttttgtcctgtcccttgcatccagtttgtactgtacctgaaacaattttacaaatcaaacactagacaactagagttgt 2787137  T
Q  208 catgtcctgtcctt 221  Q
     ||||| |||||||    
T  2787138 tatgtcatgtcctt 2787151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 6776552 - 6776665
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||  | |||||| || ||||||| | ||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  6776552 attgagtaattttttgttttatacgattttttagagacaaaatgatattttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttg 6776651  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  6776652 gtgagggacaaaaa 6776665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 16320572 - 16320676
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||||||||||||||||||||||||||| ||||||  |   ||||| || ||||  | ||||| ||||| || |||  |||| |||||||||||||||||    
T  16320572 aaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcctgtcccttgcctccagtttttcctatacctgagacagttttacaaatcaa 16320671  T
Q  187 atact 191  Q
    |||||    
T  16320672 atact 16320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 42772841 - 42772941
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||||||||||||||||| || ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||| |||||||||||||    
T  42772841 aaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcttgtctcttgcctcaagtttgtcatgtacctgaaacaattttacaaatcaa 42772940  T
Q  187 a 187  Q
    |    
T  42772941 a 42772941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 42869947 - 42870124
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg---acaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||| ||||||||||| |||||||||||||| ||   | ||||| |||||| |||||| ||| ||||||||||| | | ||   |||||| ||||||||    
T  42869947 attgagtaattttttgttttatacgatttttgagggacaaaaatgctatttttgtattttagacaacttatacgtgggacaa---gttgtgctgtggttt 42870043  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||| ||||||  |   |||||||| ||||| | ||| | |||||||| | |  | |||||||||||||||||||||    
T  42870044 ggtgagggacaaaaatatgagtttttgtcctgtctcttgcccccagtttgtcctgtaccagaaacagttttacaaatcaaa 42870124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 46680543 - 46680431
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| ||||||||||| |||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||    
T  46680543 aaaaagttgtgctgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaa 46680444  T
Q  187 atactaaacaact 199  Q
    | ||| |||||||    
T  46680443 acactgaacaact 46680431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 20694351 - 20694458
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||  ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||| |||||||||||||||||    
T  20694351 taattttttgttttatataatttttgggggacaaaatgctattttggtattttagacaacttgtacgttggacaaaaagttgcgttgtggtttggtgagg 20694450  T
Q  114 ggcaaaaa 121  Q
    | ||||||    
T  20694451 gacaaaaa 20694458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 23327897 - 23328006
Alignment:
Q  17 taattttttgtcttatacgatttttgtggaca---aatgttattttggtattt-agataacttatacgtagaataaaa-agttgtgttgtggtttggtga 111  Q
    ||||||||||| |||||||||||||| ||  |   |||||||||||||||||| ||| ||||| ||||| | | |||| ||||||||||||||||| |||    
T  23327897 taattttttgttttatacgatttttggggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaaagttgtgttgtggtttgctga 23327996  T
Q  112 ggggcaaaaa 121  Q
    ||| ||||||    
T  23327997 gggacaaaaa 23328006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 41711811 - 41711934
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgat-ttttgtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||||||| ||||||||| ||| | |||| ||||| |||||||||| |||||| ||| | |||||   | ||||||||||     
T  41711811 tttttatgctattgaataattttttgttttatacgatatttgggggacgaaatgctattttggtattttagacaacctgtacgtgagacaaaaagttgta 41711910  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
     |||||||||||||||| ||||||    
T  41711911 ctgtggtttggtgagggacaaaaa 41711934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 54542964 - 54543154
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||| ||||| | |  |||||||||| | |||||||    
T  54542964 attgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtggga-caaaagttgtgctatggtttg 54543062  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | |   ||||| |||||||||||||||| ||| |||||||    
T  54543063 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacttgaaatagttttacaaatcaaacactgaacaact 54543154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 37931894 - 37932007
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||| || |||||| ||||||| || || ||||| |||||||  |||| | | ||||| || |||| | |||||||||||||||||||||    
T  37931894 attgaataatttttcgttttatacaatttttgggggacgaaatgctattttgacattttaaacaacttgtatgtaggacaaaaagttgtgttgtggtttg 37931993  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  37931994 gtgagggacaaaaa 37932007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 44355968 - 44355788
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttg-tggacaaatgt-tattttggtattt-agataacttatacgta-gaataaaaagttgtgttgtggtt 105  Q
    |||||||||| |||| ||||| ||||||||||| |||||||| |  ||||||||||| | | | ||||| |||||| ||  ||||| |||||||||||||    
T  44355968 tattgaataacttttggtcttgtacgatttttgatggacaaaagactattttggtatatcatacaacttgtacgtaagacaaaaaaattgtgttgtggtt 44355869  T
Q  106 tggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |  |||||| |||||| ||  ||||||||| | ||| |  |||| |||||||| |||| || |||||| |||||||||||||    
T  44355868 taatgagggacaaaaatttcaatttttgtcctctctcttacctccagtttgtcctatccctaaaacag-tttacaaatcaaa 44355788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 187
Target Start/End: Complemental strand, 2630020 - 2629884
Alignment:
Q  52 gttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcg 150  Q
    ||||||||||||||| ||| ||||| |||||   | ||||||||||| | |||| ||||||||| ||||||  |   |||||||| ||||  | |||||     
T  2630020 gttattttggtattttagacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaatatgagtttttgtcatgtcctttgcctct 2629921  T
Q  151 agtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||| | |  |||||||||||||||||||||||    
T  2629920 agtttgtcctgtacctgaaacagttttacaaatcaaa 2629884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 9947930 - 9948082
Alignment:
Q  37 tttttgtggacaaatgt-tattttggtatttaga-taacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgt 134  Q
    |||||||||||||| |  ||||||||||||| || |||||| |||||   | ||||||||||  |||||||| |||||||  || || |||  |||||||    
T  9947930 tttttgtggacaaaggactattttggtattttgaataacttgtacgtgagacaaaaagttgtaatgtggtttagtgagggataagaattttagtttttgt 9948029  T
Q  135 cgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||| | ||||| |||||||| | |  || ||||||||||||||||||||    
T  9948030 catgtctcttgcctcaagtttgtcatgttccttaaacagttttacaaatcaaa 9948082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 25978644 - 25978545
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| | |||||||||||||| |||||| ||   |||||||| |||  || ||||| | |||||| | || ||||||||||||||||||||||    
T  25978644 aaaaagttgtgatatggtttggtgagggacaaaaatttcagtttttgtcctgttcattgcctccaatttgtcatgtc-ctgaaacagttttacaaatcaa 25978546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 56487275 - 56487215
Alignment:
Q  127 atttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||| ||||  | ||||| |||||||| ||| ||||||||||||||||||||||||    
T  56487275 atttttgtcctgtcccttgcctcaagtttgtcctatatctgaaacagttttacaaatcaaa 56487215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 42772732 - 42772818
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg--tggacaaatgttattttggta-tttagataacttatacgtagaataaaaagtt 94  Q
    ||||| ||||||||||| ||||| ||||||||   | | |||||||||||||||| |||||||||||||||||| | | ||||||||    
T  42772732 attgagtaattttttgttttatatgatttttggaggaaaaaatgttattttggtattttagataacttatacgtgggacaaaaagtt 42772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 43739434 - 43739541
Alignment:
Q  10 tattgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    |||| |||||||||| ||||||||| |||||| ||||| ||| |||||||||  ||||| ||| ||||| || || | | |||| |||||||||||||||    
T  43739434 tattaaataatttttggtcttatacaattttttgtggataaaatgttattttaatattttagacaacttgtatgtgggacaaaatgttgtgttgtggttt 43739533  T
Q  107 ggtgaggg 114  Q
    ||||||||    
T  43739534 ggtgaggg 43739541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 12600899 - 12600973
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    ||||| ||||||||||||| ||| ||||| |||||   | ||||||||||||||||||||| |||||| ||||||    
T  12600899 aaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaaaa 12600973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 14296571 - 14296628
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt 66  Q
    ||||| ||||||||||| |||||||||||||| | ||| |||||||||||||||||||    
T  14296571 attgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattt 14296628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 14314819 - 14314876
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt 66  Q
    ||||| ||||||||||| |||||||||||||| | ||| |||||||||||||||||||    
T  14314819 attgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattt 14314876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 29616144 - 29616240
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggt 104  Q
    ||||| ||||||||||| |||||||||||||   |||| |||||||||||||||| |||||| || || ||||| | | ||||||||||| ||||||    
T  29616144 attgagtaattttttgttttatacgatttttaagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggt 29616240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32858287 - 32858327
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt 41  Q
    |||||||| |||||||||||||||||| |||||| ||||||    
T  32858287 tttttatagtattgaataattttttgttttatacaattttt 32858327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15001428 - 15001650
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgt 98  Q
    |||||||  |||||||||||||| ||| ||||| |||||||| || ||||||| ||||||||||||| ||||||||| ||||| | | ||||||||||||    
T  15001428 tttttatggtattgaataattttctgttttatatgatttttgggggacaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgt 15001527  T
Q  99 tgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaac 198  Q
    |||||||||||||||| |||||| ||   |||||||  ||||||| ||||| |||||||| | || ||||||||||||||||||||||| |||  |||||    
T  15001528 tgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccagtttgtcctgtccctgaaacagttttacaaatcaaacactggacaac 15001627  T
Q  199 ttaagttatcatgtcctgtcctt 221  Q
    | ||||| |  ||||||||||||    
T  15001628 tgaagttgttctgtcctgtcctt 15001650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 41548579 - 41548802
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| || ||||| |||||||||| ||||| ||| ||||| ||||| | | |||||||||||    
T  41548579 tttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtg 41548678  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    ||||||| || |||||  ||||||  |   |||||||| ||||| | ||||| |||||||| | | |||||||||||||||||||||||| |||  ||||    
T  41548679 ttgtggtctgctgaggtacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcatgtatctgaaacagttttacaaatcaaacactggacaa 41548778  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    || ||||| |  ||||||||||||    
T  41548779 ctgaagttgttctgtcctgtcctt 41548802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 30543156 - 30542943
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||| ||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | |  ||||||||||||||||||||    
T  30543156 attgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacgaaaagttgtgttgtggtttg 30543057  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| |||| || ||||| |||||||| | |  ||||||||||||||||||||||| |||  |||||| ||||| |    
T  30543056 gtgagggacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactaaagttgt 30542957  T
Q  208 catgtcctgtcctt 221  Q
     ||||| |||||||    
T  30542956 tatgtcatgtcctt 30542943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7591591 - 7591368
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| || ||||| || ||||||| ||||| ||| |||||||||||   | |||||||||||    
T  7591591 tttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttatacgtgtgacaaaaagttgtg 7591492  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    |||||||||| |||||  ||||||  |   |||||||| ||||| | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||    
T  7591491 ttgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaa 7591392  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    || ||||| |  ||||||||||||    
T  7591391 ctgaagttgttctgtcctgtcctt 7591368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 30501106 - 30501295
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| ||    |||||||||||| |||||| ||  ||||| ||||| | | |||||||||||    
T  30501106 tttttatgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtg 30501205  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  | | |||||||| ||||  | ||||| |||||||||| |  |||||||||||||||||||||||    
T  30501206 ctgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 30501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 10656830 - 10656637
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggacaaat-gttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||||| | ||||||||||||| |||||||||| ||||||||| ||||| ||| || || |||||   | |||||||||||    
T  10656830 tttttatgttattgaataattttttcttttatacgattttttgtggacaaattgttattttgatattttagacaatttgtacgtgagacaaaaagttgtg 10656731  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatact 191  Q
    ||||||||| |||| || |||||||||   |||||||| ||||| | ||||| |||||||| | ||||| ||| || |||||||||||||||||    
T  10656730 ttgtggttttgtgaaggacaaaaaattcagtttttgtcctgtcttttgcctctagtttgtcatgtctctaaaaaagatttacaaatcaaatact 10656637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 41709748 - 41709961
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||||||||| ||||| | | ||||||||||| |||||||||    
T  41709748 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgttggacaaaaagttgtgctgtggtttg 41709847  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  41709848 gtgagggacaaaaatatgagtttttgtcctgtcatttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 41709947  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  41709948 tctgtcctgtcctt 41709961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 3251790 - 3251611
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||||| ||||||||||||| |||||||||    
T  3251790 attgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtaggataaaaagttgtgatgtggtttg 3251691  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||  ||||  | ||||| |||||||| | |  |||||||||||||| ||||||||    
T  3251690 gtgagggacaaaaatataagtttttgttctgtcgcttgcctccagtttgtcctgtacctgaaacagttttataaatcaaa 3251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 14005188 - 14004965
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg-tggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| |||||| ||||||  |||||||| |||||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  14005188 tttttatgacattgagtaattttttgttttatacaattttttatggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtg 14005089  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    |||||||||||||| || ||||||  |   |||||||| ||||  | ||||| |||||||| | |  || ||||||||||||||||||||||||  ||||    
T  14005088 ttgtggtttggtgatggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctcaaacagttttacaaatcaaatactggacaa 14004989  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    || || || | ||||||| |||||    
T  14004988 ctaaaattgttatgtcctatcctt 14004965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 29563360 - 29563181
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |  ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  29563360 attgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 29563261  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | |||||||||||||| | |  |||||||||||||||||||||||    
T  29563260 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctcgagtttgtcctgtacctgaaacagttttacaaatcaaa 29563181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 29672457 - 29672278
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||||||||| ||||| | | |||||||||||||||||||||    
T  29672457 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttg 29672358  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||| |||||||    
T  29672357 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacgaatcaaa 29672278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 8673189 - 8672976
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  8673189 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 8673090  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  8673089 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactatagttgt 8672990  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  8672989 tttgtcctgtcctt 8672976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 37664417 - 37664204
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| | |||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  37664417 attgagtaattttttgttttatatgatttttgagcgacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttg 37664318  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  ||||||    
T  37664317 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttat 37664218  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  37664217 tctgtcctgtcctt 37664204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 34101480 - 34101658
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||| |||||||| |||||||||||||    
T  34101480 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaaaaaaaagttatgttgtggtttgg 34101579  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||| ||||||  |   |||||||  ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  34101580 tgagggacaaaaatatgagtttttgtgttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 34101658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 5968998 - 5968819
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |||||||||||||||| ||| || || ||||| | ||||||||||||| |||||||||    
T  5968998 attgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttg 5968899  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||| || ||||||  |   |||||||| ||||  | ||||| |||||||| | |  || ||||||||||||||||||||    
T  5968898 gtgaaggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgtaccttaaacagttttacaaatcaaa 5968819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 6386547 - 6386726
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| |||||   | |||||||||||||||||||||    
T  6386547 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttg 6386646  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| | ||| |  |||| |||||||| |||  |||||||||||||| ||||||||    
T  6386647 gtgagggacaaaaatatgagtttttgtcctatcttttacctccagtttgtcctatacctgaaacagttttataaatcaaa 6386726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 10467025 - 10467248
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | || |||||||||||||| ||||||||||||| | |||| ||||| ||||||| || |||||| ||||| ||||| | | |||||||||||    
T  10467025 tttttatgacatagaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 10467124  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    |||||||||| |||||  ||||||  |   |||||||| ||||| | ||||| |||||||| | |  || |||||||||||||||||||| |||  ||||    
T  10467125 ttgtggtttgctgaggaacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaacactggacaa 10467224  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  10467225 ctagagttgttctgtcctgtcctt 10467248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 31513717 - 31513538
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| || ||||||||||||| ||| ||||| ||| ||| | ||||||||||| |||||||||    
T  31513717 attgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacctaggacaaaaagttgtgctgtggtttg 31513618  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||| ||||||||||||||    
T  31513617 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatctacctgaaacaattttacaaatcaaa 31513538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 34063099 - 34063278
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||| ||||| | | ||||||||||| |||||||||    
T  34063099 attgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 34063198  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||| ||||||||||||||||    
T  34063199 gcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaagagttttacaaatcaaa 34063278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 29611199 - 29611010
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| | |||||| || || ||||| ||||||||| ||| ||| ||||| ||||| | | |||||||||||    
T  29611199 tttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgctattttggtgttttagacaacttttacgtgggacaaaaagttgtg 29611100  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||| ||||| |||||| ||   |||||||| ||||  | ||||| |||||||  | || |||||||||||||||||||||||    
T  29611099 ttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaa 29611010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 4052462 - 4052666
Alignment:
Q  22 ttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaa 118  Q
    |||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||||||||| |||    
T  4052462 ttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaa 4052561  T
Q  119 aaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtcctgtc 218  Q
    |||  |   |||||||| ||||  | ||||| | |||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |  |||||||||    
T  4052562 aaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtc 4052661  T
Q  219 cttta 223  Q
    |||||    
T  4052662 cttta 4052666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 32020135 - 32019916
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |  ||||||||||||| ||| ||||| ||||| ||| ||||||||||| |||||||||    
T  32020135 attgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttg 32020036  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    |||||||  |||||  |   |||||||| |  |  | || || |||||||| | |  ||||||||||||||||||||||| ||| |||||||  |||| |    
T  32020035 gtgagggataaaaatatgagtttttgtcctaccccttgcttccagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgt 32019936  T
Q  208 catgtcctgtcctttaattt 227  Q
      |||||||||||| |||||    
T  32019935 tctgtcctgtccttcaattt 32019916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 37618526 - 37618347
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtatttagat-aacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||| ||||||| || || ||||| |||||||||||||| |  ||||| |||||   | |||||||||||||||||||||    
T  37618526 attgaataattttttgttttatacaatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgagacaaaaagttgtgttgtggtttg 37618427  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | |  |||||||||||||||||||||||    
T  37618426 gtgagggacaaaaatatcagtttttgtcctgtcctttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 37618347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 45446426 - 45446605
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  45446426 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 45446525  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||  ||||||  |   ||||| || ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  45446526 gtgaggaacaaaaatatgagtttttatcctgtcccttgcctccagtttgtcgtgtacctgaaacagttttacaaatcaaa 45446605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 12753459 - 12753246
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| |||||| |||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| || || | | |||||||||||||||||||||    
T  12753459 attgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttg 12753360  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||  ||||||  |   |||||||| ||||  | ||||  |||||||| | |  |||||||||| |||||||||||| |||  ||||||  |||| |    
T  12753359 gtgaggaacaaaaatatgagtttttgtcttgtcatttgccttcagtttgtcctgtacctgaaacagtcttacaaatcaaacactggacaactagagttgt 12753260  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  12753259 tttgtcctgtcctt 12753246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 32303719 - 32303606
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  32303719 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 32303620  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  32303619 gtgagggacaaaaa 32303606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 45114026 - 45114239
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| ||||||||||||| | |||| ||||| |||||||||| |||||| ||||| ||| ||  | ||||||||||  |||||||||    
T  45114026 attgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacctatgacaaaaagttgtactgtggtttg 45114125  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| | ||  | || ||  ||||||  | |  ||||||||||||||||||||||| ||| ||||| | ||||| |    
T  45114126 gtgagggacaaaaatatgagtttttgtcctctcccttgcatctcgtttgttctgtacctgaaacagttttacaaatcaaacactgaacaattgaagttgt 45114225  T
Q  208 catgtcctgtcctt 221  Q
    ||||||||||||||    
T  45114226 catgtcctgtcctt 45114239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 39642844 - 39643051
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||| ||||||| ||    ||||| ||||||||||||| ||| ||| | ||||| | | | |||||||||    
T  39642844 tttttatgacattgaataattttttgttttatacaatttttgggggatgaaatgctattttggtattttagacaacctgtacgtgggacagaaagttgtg 39642943  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    ||||||||||||||||| ||||||  |   ||||| || ||||  | ||||| |||||||| | |  |||||||||||||| |||||||| |||  ||||    
T  39642944 ttgtggtttggtgagggacaaaaatatcagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttaaaaatcaaacactggacaa 39643043  T
Q  198 cttaagtt 205  Q
    || |||||    
T  39643044 ctgaagtt 39643051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 16485953 - 16485830
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||| ||| ||||| |||||||| | ||| ||||| |||||| |||||| ||| ||||||||||||| | |||||||||||    
T  16485953 tttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttagaaaacttatacgtaggacaaaaagttgtg 16485854  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
     |||||||||| ||||| ||||||    
T  16485853 ctgtggtttggcgagggacaaaaa 16485830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 27103930 - 27104109
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||  ||||||||    
T  27103930 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttg 27104029  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  27104030 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 27104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 7394942 - 7394769
Alignment:
Q  17 taattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||| |||||||||  ||||||| |||||||||||||||| ||| ||||| |||||   | ||||||||||||| |||||||||||||    
T  7394942 taattttttgttttatgcgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagg 7394843  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||  ||||||||    
T  7394842 gacaaaaatatgagtttttgtcatgtcccttgcctctagtttgtcatgtacctgaaacagttttgtaaatcaaa 7394769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 13407079 - 13406878
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||  ||||| ||||||||||| |||||||||||||| || || ||||| |||||||||| |||||| ||||| |||||   | ||||| || ||    
T  13407079 tttttatagcattgagtaattttttgttttatacgatttttggggcacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaaattatg 13406980  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||||| ||||||  |   |||||||  |||   | ||||| |||||||| |||  ||||||||||||||||||| ||| |||| ||||    
T  13406979 ctgtggtttggtgagggacaaaaatatgagtttttgttctgttccttgcctccagtttgtcatatacctgaaacagttttacaaattaaacactagacaa 13406880  T
Q  198 ct 199  Q
    ||    
T  13406879 ct 13406878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6460224 - 6460337
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg-tggacaaa-tgttattttggtattt-agataacttatacgtagaataaaa-agttgt 96  Q
    |||||||  ||||||||||||||  ||||||||||||||||  |||||||| |||||||||||||||| ||| ||||||||||| | | |||| ||||||    
T  6460224 tttttatggtattgaataatttt--gtcttatacgattttttatggacaaaatgttattttggtattttagacaacttatacgtgggacaaaaaagttgt 6460321  T
Q  97 gttgtggtttggtgag 112  Q
    | ||||||||||||||    
T  6460322 gatgtggtttggtgag 6460337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10320421 - 10320305
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||||| || |||||||||| ||||  |||||| |||||||||| ||||| ||| ||||| |||||    ||||||||||||    
T  10320421 tttttatggtattgaataatttttggttttatacgattgttgttagacaaaatgttattttgatattttagacaacttgtacgtgtggtaaaaagttgtg 10320322  T
Q  98 ttgtggtttggtgaggg 114  Q
    |||||||||||||||||    
T  10320321 ttgtggtttggtgaggg 10320305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 22756489 - 22756366
Alignment:
Q  64 tttagataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatc 163  Q
    |||||||||||| |||||   | |||||||||||||||||| |  ||||||  ||||| || | |||||||| ||||| | ||||| | |||||| ||||    
T  22756489 tttagataacttgtacgtgatacaaaaagttgtgttgtggtataatgagggataaaaatttatgtttttgtcttgtctcttgcctcaaatttgtcctatc 22756390  T
Q  164 tctgaaacagttttacaaatcaaa 187  Q
     | |||||||||||||||||||||    
T  22756389 ccagaaacagttttacaaatcaaa 22756366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 22999218 - 22999408
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgt-agaataaaaagttgt 96  Q
    ||||||| | ||||||||||||||||| ||||||||||||| | |||| ||||| ||||||| || |||||| || || |||||  ||  |||||||| |    
T  22999218 tttttatgacattgaataattttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaagttgtacgtgggacaaaaaagtttt 22999317  T
Q  97 gttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | | ||||||| |||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||||||    
T  22999318 gctatggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 22999408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 16595284 - 16595171
Alignment:
Q  10 tattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||||| |||||||||||||||| ||| || ||| | |||||| ||| |||||||||||| ||||| | | ||||||||||||||||| ||    
T  16595284 tattgaataatttttggtcttatacgatttttggtgaacaaaaagctatttttgtattttagataacttgtacgtgggacaaaaagttgtgttgtggatt 16595185  T
Q  107 ggtgaggggcaaaa 120  Q
     | ||||| |||||    
T  16595184 agcgagggacaaaa 16595171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 17805667 - 17805851
Alignment:
Q  17 taattttttgtcttatacgattttt--gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttggtgag 112  Q
    ||||||||||| |||||||||||||  | |||| |||||||||||||||| |||||| ||||| |||||   | ||| ||||||| | ||||||||||||    
T  17805667 taattttttgttttatacgatttttgggaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaagagttgtgctttggtttggtgag 17805766  T
Q  113 gggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    |  ||||||  |   |||||||| ||||  | ||||| |||||||| | |   |||||||||||||||||||||| ||| |||||    
T  17805767 gaacaaaaatatgagtttttgtcttgtcccttgcctctagtttgtcctgtacttgaaacagttttacaaatcaaacactgaacaa 17805851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 25478214 - 25478427
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||  || ||||| |  ||||||||||||| ||| ||||| ||||||| | ||||||||||| |||| ||||    
T  25478214 attgagtaattttttgttttatacgattttttagggacaaaatactattttggtattttagacaacttgtacgtaggacaaaaagttgtgctgtgatttg 25478313  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
     |||||| ||||||  |   ||||| || ||||  | | ||| |||||||| | |  ||||||||||||||||||| ||| |||  ||||||  |||| |    
T  25478314 atgagggacaaaaatatgagtttttttcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaattaaacactggacaactagagttgt 25478413  T
Q  208 catgtcctgtcctt 221  Q
     |||||||||||||    
T  25478414 tatgtcctgtcctt 25478427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 31732035 - 31732148
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||| || ||   | ||||||||||  |||||||||    
T  31732035 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgagacaaaaagttgtactgtggtttg 31732134  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  31732135 gtgagggacaaaaa 31732148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 37861869 - 37862009
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggc 146  Q
    ||||| ||||||||||||| ||| ||||| ||||||| | ||| |||| || ||||||||||||||||  |||||  |   |||||||| ||||  | ||    
T  37861869 aaatgctattttggtattttagacaacttgtacgtaggacaaatagttatgatgtggtttggtgagggataaaaatatgagtttttgtcctgtcacttgc 37861968  T
Q  147 ctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||| |||||||| | |  ||||||||||||||| |||||||    
T  37861969 ctccagtttgtcctgtacctgaaacagttttactaatcaaa 37862009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 54141 - 54320
Alignment:
Q  10 tattgaataattttttgtcttatacga-tttttgtgga-caaatgttattttggtatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||||||||||| |||| ||||||||||  |||| ||||||||   ||| |||||||| || || | | ||||||||||| ||||||||     
T  54141 tattgaataattttttgtcttaaacgattttttgtggataaaatattattttgtattttcgataacttgtatgtgggacaaaaagttgtgatgtggttta 54240  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |  | || |||||| || | |||||||| ||||  | |  ||  | ||||| | |||| |||||||||||||||||||||    
T  54241 gcaaaggacaaaaatttatgtttttgtcatgtcccttgtgtccggattgtcatgtctcagaaacagttttacaaatcaaa 54320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 21272694 - 21272768
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    ||||| |||||| |||||| ||| ||||| ||||| | | ||||||||||| |||||||||||||||| ||||||    
T  21272694 aaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa 21272768  T

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Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Original strand, 17520645 - 17520678
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaa 120  Q
    |||||||||||||||||||||||||||| |||||    
T  17520645 aaaaagttgtgttgtggtttggtgagggacaaaa 17520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 35225623 - 35225812
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||  ||| ||||| |||||||| | ||| ||||| |||||| |||||| ||| ||||| ||| |   | |||||||||||    
T  35225623 tttttatggtattgaataatttcctgttttatatgatttttgggtgacgaaatgctatttttgtattttagacaacttgtacttgtgacaaaaagttgtg 35225722  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||| ||||| |||||| |    |||||||| ||||  | ||||| |||||||| | || ||||||| |||||||||| ||||    
T  35225723 atgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagtttgtcctgtccctgaaactgttttacaaaccaaa 35225812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 32303585 - 32303545
Alignment:
Q  165 ctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  32303585 ctgaaacagttttacaaatcaaacactgaacaactaaagtt 32303545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 37474762 - 37474850
Alignment:
Q  99 tgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||| |||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||||||    
T  37474762 tgtggtttgctgagggacaaaaatataagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 37474850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 49749024 - 49748827
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtatttagat-aacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || || |||||||||||||||||||| |  ||||| ||||| | | |||||||||||||||||||||    
T  49749024 attgaataattttttgttttatacgatttttgggggacgaaatgttattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttg 49748925  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||||||||||| ||||    
T  49748924 gtgagggacaaaaatatcagtttttgtcatgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactaaacaacttgagtt 49748827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 34351491 - 34351303
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||| ||||||||||||| | ||||| |||||||||| ||||| ||| |||||||||| ||||| ||| ||||| || ||   | |||||||||||    
T  34351491 tttttatagtattgaataatttatggtcttgtacgattttttgtggataaaatgttattttgatattttagacaacttgtatgtgcgacaaaaagttgtg 34351392  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||||||||| |||||| ||| || |||| ||||||||||||||||  |||| |||||||| | || ||||||||||||||||||||||    
T  34351391 ttgtggtttgatgagggacaataatttttgtttttgtcgtgtctatttcctctagtttgtcatgtccctgaaacagttttacaaatcaa 34351303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 39052961 - 39052760
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||  ||||| |||||| |||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  39052961 tttttatagcattgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtg 39052862  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    ||||||||||||||| | ||||||  |   |||||||| |||| || ||||| |||||||| | |  ||||||||||||||||||||||| |||| ||||    
T  39052861 ttgtggtttggtgagagacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcctgtgcctgaaacagttttacaaatcaaacactagacaa 39052762  T
Q  198 ct 199  Q
    ||    
T  39052761 ct 39052760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 50386579 - 50386356
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||| ||||||| |||   ||||| ||||||| ||||| ||| ||||| ||||||| | |||||||||||    
T  50386579 tttttatcacattgaataattttttgttttatacaatttttggggaacaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgtg 50386480  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     ||||||||| |||||  ||||||  |  ||||||||| ||||| | ||||| |||||||| | |  ||||||||||||||||||||||| |||| ||||    
T  50386479 ctgtggtttgttgaggcacaaaaatatcaatttttgtcatgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactagacaa 50386380  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  50386379 ctggagttgttctgtcctgtcctt 50386356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 34026629 - 34026828
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||| |||||    
T  34026629 tttttatggtattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtg 34026728  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    ||||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| |||  ||||||||||||||||||||||| ||| |||||    
T  34026729 ttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctatacctgaaacagttttacaaatcaaacactgaacaa 34026828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 3864787 - 3864609
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||| ||||||||||| ||||| |||||||| ||||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||||||||||||||    
T  3864787 attgagtaattttttgttttatatgatttttggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 3864688  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| |  |||||||||||||||||||||||    
T  3864687 cgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 3864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 29584847 - 29585062
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||| | ||||||||||||||  ||||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  29584847 attgagtaattttttattttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 29584946  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  29584947 gtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 29585046  T
Q  208 catgtcctgtccttta 223  Q
      ||||||||||||||    
T  29585047 tctgtcctgtccttta 29585062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 31883145 - 31882956
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||    
T  31883145 tttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 31883046  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||||||||| |||||  ||||||  |   |||||||||||||| | ||||| |||||||| | |  |||||||||||||||||||||||    
T  31883045 ctgtggtttgctgaggcacaaaaatatcagtttttgtcgtgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 31882956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 28675762 - 28675941
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  28675762 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 28675861  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| | ||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  28675862 gtgagggacaaaaatatgagtttttgtcctatcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 28675941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33364901 - 33364694
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||||||||||| | |||| ||||| ||||||| || |||||| ||||| |||||   | |||||||||||    
T  33364901 tttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgagacaaaaagttgtg 33364802  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     ||||||||| |||||||||||||  |   |||||||| ||||| | ||||| |||||||| | |  ||||||||||||||||||| ||| |||  ||||    
T  33364801 atgtggtttgctgaggggcaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaataaaacactggacaa 33364702  T
Q  198 cttaagtt 205  Q
    || |||||    
T  33364701 ctgaagtt 33364694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 51925321 - 51925146
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtatttagat-aacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || || |||||||||||||||||| | |  ||||| ||||| | | |||||||||||||||||||||    
T  51925321 attgaataattttttgttttatacgatttttgggggacgaaatgttattttggtattaaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttg 51925222  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||    
T  51925221 gtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcatgtacctgaaacagttttacaaat 51925146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 2135042 - 2135255
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| |||||| || ||||| | | ||||||||||| |||||||||    
T  2135042 attgagtaattttttgttttatacgatttttgagggacaaagtgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttg 2135141  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||  ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  2135142 gtgagggacaaaaatatgagtttttgttctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 2135241  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  2135242 tctgtcctgtcctt 2135255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 12349284 - 12349071
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | | ||||||||| |||||||||    
T  12349284 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacataaagttgtgctgtggtttg 12349185  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||| | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  12349184 gtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgt 12349085  T
Q  208 catgtcctgtcctt 221  Q
     |||||||||||||    
T  12349084 tatgtcctgtcctt 12349071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 25927432 - 25927261
Alignment:
Q  19 attttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagggg 115  Q
    ||||||||| |||||||||||||| |||   ||||||||||||||||||| ||| ||||| ||||| | | |||||||||||||||| |||||| ||||     
T  25927432 attttttgttttatacgatttttgaggaacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaaggga 25927333  T
Q  116 caaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||  |   |||||||| ||||  | ||||| |||||||| | | | ||||||||||||||||||||||    
T  25927332 caaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtatttgaaacagttttacaaatcaaa 25927261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 3964259 - 3964457
Alignment:
Q  9 atattgaataattttttgtcttatacgatttttgtggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||||| ||| ||||| |||||||| |||| ||||| ||||||||||||| ||| ||||| ||| | | | ||||||||||| ||||||||    
T  3964259 atattgaataattttatgttttatatgatttttggggacgaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgctgtggttt 3964358  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    |||||||| |||||| ||   ||||||||  ||   | ||||| | |||||| | ||  |||||||||||||||||||||| |||  |||||| |||||    
T  3964359 ggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatgaaacagttttacaaatcaaacactggacaactgaagtt 3964457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 21373941 - 21374099
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggc 146  Q
    ||||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||||||||| ||||||  |    ||||||| ||||  | ||    
T  21373941 aaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgc 21374040  T
Q  147 ctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    ||| |||||||| | |  ||||||||||||||||||||||| |||| |||||| |||||    
T  21374041 ctcaagtttgtcctgtacctgaaacagttttacaaatcaaacactagacaactgaagtt 21374099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 3867772 - 3867583
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| |||||||| || ||||| || ||||||||| ||| ||| ||||| ||||||| | |||||||||||    
T  3867772 tttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttagaaaacttgtacgtaggacaaaaagttgtg 3867673  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| |||||| ||    ||||||| ||||| | | ||| ||| |||  | || |||||||||||||||||||||||    
T  3867672 ctgtggtttggtgagggacaaaaatttcaggttttgtcatgtctcttgtctccagtatgttctgtccctgaaacagttttacaaatcaaa 3867583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 20609771 - 20609582
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| |||||||||||  ||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  20609771 tttttatgacattgagtaattttttgttatatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 20609672  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||| | |||||||| | |  |||||||||||||||||||||||    
T  20609671 ctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagtttgtcctgtacctgaaacagttttacaaatcaaa 20609582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 38213332 - 38213505
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||| |||||     
T  38213332 taattttttgttttatacgatttttgggggacaaaatggtattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttcgtgagt 38213431  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||| ||||| | ||||| || ||||| |||  |||||||| ||||||||||||||    
T  38213432 gacaaaaatatgagtttttgtcctgtctcttgcctccagattgtcctatacctgaaacaattttacaaatcaaa 38213505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 42636510 - 42636337
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| ||| |||||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||||||||    
T  42636510 taattttttgttttaaacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 42636411  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||  ||||  | ||||| |||||||| |||  || ||||||||||||||||||||    
T  42636410 gacaaaaatatgagtttttgttctgtcccttgcctccagtttgtcctatacctaaaacagttttacaaatcaaa 42636337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 54622909 - 54622796
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || || ||||| ||||||||||||| ||| ||||| ||||| | ||||||||||||||||||||||     
T  54622909 attgaataattttttgttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttc 54622810  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||| | ||||||    
T  54622809 gtgagcgacaaaaa 54622796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 51296552 - 51296728
Alignment:
Q  10 tattgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    |||||| ||||||||||| ||||||||||||| | ||||||| || |||||| |||||| ||| ||||| ||| ||| | ||||| ||||||||||||||    
T  51296552 tattgagtaattttttgttttatacgattttttggggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgttgtggttt 51296651  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    |||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||    
T  51296652 ggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaat 51296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 21221473 - 21221259
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||| ||||||| || ||||| || ||||||||||||| ||| ||||| |||||   | |||||||||||||||||||||    
T  21221473 attgagtaattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttg 21221374  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| || ||||| | |  ||||||||||||||||||||||||| |  ||||||  |||| |    
T  21221373 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccag-ttgtcctgtacctgaaacagttttacaaatcaaatattggacaactagagttgt 21221275  T
Q  208 catgtcctgtccttta 223  Q
      ||||||||||||||    
T  21221274 tctgtcctgtccttta 21221259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 51259893 - 51259714
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||   |||| |||||||||||||||| |||||| ||||| ||||| | | |||||||||||  ||||||||    
T  51259893 attgagtaattttttgttttatatgatttttaagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttg 51259794  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  51259793 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 51259714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 1344820 - 1344607
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| |||||   | ||||||||||| |||||||||    
T  1344820 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttg 1344721  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   ||| |||| ||||  | ||||| |||||||| | |  |||||| |||||||||||||||| |||  ||||||  |||| |    
T  1344720 gtgagggacaaaaatatgagtttctgtcctgtcccttgcctccagtttgtcctgtacctgaaatagttttacaaatcaaacactggacaactagagttgt 1344621  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  1344620 tctgtcctgtcctt 1344607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 4851569 - 4851456
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||||||||| |||    
T  4851569 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgggttg 4851470  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  4851469 gtgagggacaaaaa 4851456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 26282500 - 26282387
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||||||||| | | ||||||||||| |||||||||    
T  26282500 attgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgctgtggtttg 26282401  T
Q  108 gtgaggggcaaaaa 121  Q
     |||| | ||||||    
T  26282400 atgagagacaaaaa 26282387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 40094475 - 40094688
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||| ||||||||| || ||||| || ||||||||||||| ||| || || |||||  || ||||||||||| |||||||||    
T  40094475 attgagtaattttttgttttatgcgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgaaacaaaaagttgtgatgtggtttg 40094574  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||  | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  40094575 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgttctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 40094674  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  40094675 tctgtcctgtcctt 40094688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 44000232 - 44000408
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttg-tggacaaatgt-tattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    |||||| |||||| ||||||||| ||||| | | ||||| ||||| ||||||||    
T  44000232 tattgaataatttttggtcttatacgatttttggtggacaaaaaactatttttgtatttcagataacttgtacgtgggacaaaaaattgtgatgtggttt 44000331  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
     |||||||  |||||||| | |||||||| ||||  | |||| |||||| || | || |  ||||||||||||||||    
T  44000332 agtgagggaaaaaaaattctgtttttgtcatgtcctttgccttgagtttatcatttcccaaaaacagttttacaaat 44000408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 47958545 - 47958366
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| ||| |||||    
T  47958545 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttg 47958446  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| ||||| || | |  |||||||| ||||||||||||||    
T  47958445 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttttcctgtacctgaaacaattttacaaatcaaa 47958366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 53557908 - 53557729
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||| |||||   | |||||||||||  ||||||||    
T  53557908 attgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgcagtggtttg 53557809  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| |||||   |   |||||||| |||| || ||||| |||||||| | |  || ||||||||||||||||||||    
T  53557808 gtgagggacaaaactatgagtttttgtcctgtccattgcctccagtttgtcctgtacctaaaacagttttacaaatcaaa 53557729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 24571332 - 24571466
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| |  ||||||||||||||||||||||    
T  24571332 aaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaa 24571431  T
Q  187 atactaaacaacttaagttatcatgtcctgtcctt 221  Q
    | |||  ||||||  |||| |  ||||||||||||    
T  24571432 acactggacaactagagttgttttgtcctgtcctt 24571466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 25860528 - 25860355
Alignment:
Q  17 taattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| ||||||||||||||  ||   ||||| ||||| ||||||| ||| ||||| |||||   | ||||||||||| |||||||||||||||    
T  25860528 taattttttgttttatacgatttttggagaacaaaatgctatttcggtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagg 25860429  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  25860428 gacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 25860355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 29646047 - 29646229
Alignment:
Q  20 ttttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggc 116  Q
    |||||||| |||||||||||||| || ||||| || ||||||||||||| | | ||||| ||||| | | ||||||||||| |||||||||||||||| |    
T  29646047 ttttttgttttatacgatttttgggggacaaaatgctattttggtattttaaacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggac 29646146  T
Q  117 aaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    |||||  | | |||||||| | ||  | ||||| ||||| || | |  || |||||||||||||||||||| ||| |||||||    
T  29646147 aaaaatatatgtttttgtcctatcccttgcctccagtttatcgtgtacctaaaacagttttacaaatcaaacactgaacaact 29646229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 24721496 - 24721648
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggc 146  Q
    ||||| ||||||||| ||| ||| ||||| || || | ||||||||||||||||||||||| |||||  | |||| |||  |||||||| ||||  |  |    
T  24721496 aaatgctattttggtgttttagacaacttgtatgtgggataaaaagttgtgttgtggtttgttgaggtaccaaaattttagtttttgtcctgtcctttac 24721595  T
Q  147 ctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||| |||||||  | || ||||||||||||||||||||||| ||| |||||||    
T  24721596 ctccagtttgttctgtccctgaaacagttttacaaatcaaacactgaacaact 24721648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 20255017 - 20255195
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| |||||||||||||||| ||| ||||| || || | | || |||||||| |||||||||    
T  20255017 attgagtaattttttgttttataagatttttgagggacaaaatgttattttggtattttagacaacttgta-gtgggacaagaagttgtgctgtggtttg 20255115  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| |||   | ||||| |||||||| | |  |||||||||||||||||||||||    
T  20255116 gtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 20255195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 44116911 - 44117090
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||| ||| |||||| ||||| ||||| | | |||||||||||  ||||||||    
T  44116911 attgagtaattttttgttttatacgatttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttg 44117010  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||| |||||||||||||||    
T  44117011 atgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacggttttacaaatcaaa 44117090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 19906813 - 19906931
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| |||||||||||||||| |||||| ||   |||||||| ||||  | ||||| |||||||  | || |||||||| |||||||||||||    
T  19906813 aaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaa 19906912  T
Q  187 atactaaacaacttaagtt 205  Q
    | |||  |||||| |||||    
T  19906913 acactggacaactgaagtt 19906931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 28625033 - 28624920
Alignment:
Q  10 tattgaataattttttgtcttatacgattttt-gtggacaaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||||||||||||| ||||||| || ||| ||  | ||||| ||| |||||||||||||||||||| | ||||| || ||||||| |||     
T  28625033 tattgaataattttttgtcttataagatttttggtagactaaaatgatttttgtattttagataacttatacgtaggacaaaaatttatgttgtgcttta 28624934  T
Q  108 gtgaggggcaaaaa 121  Q
     |||||| ||||||    
T  28624933 atgagggacaaaaa 28624920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 22484866 - 22484678
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||| ||| |||||  ||||||| | ||| ||||| |||||| |||||| ||| ||||||||||| | | |||||||||||    
T  22484866 tttttatggtattgaataattttctgtattatataatttttgggtgacgaaatgctatttttgtattttagacaacttatacgtgggacaaaaagttgtg 22484767  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||| ||||||  |||  |||||| | |   ||||||| ||||  | ||||| |||||||| | || ||||||| ||||||||||||||    
T  22484766 ttgtagtttggcaaggaacaaaaattgtagcttttgtcatgtcccttgcctccagtttgtcatgtccctgaaactgttttacaaatcaa 22484678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 41683079 - 41682953
Alignment:
Q  95 gtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaa 194  Q
    ||||||||||||| |||||| |||||   |   |||||||| ||||| | ||||| |||||||| | |  ||||||||||||||||||||||| |||  |    
T  41683079 gtgttgtggtttgctgagggacaaaagtatcagtttttgtcttgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgga 41682980  T
Q  195 caacttaagttatcatgtcctgtcctt 221  Q
    ||||| ||||| |  ||||||||||||    
T  41682979 caactgaagttgttttgtcctgtcctt 41682953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 50678758 - 50678962
Alignment:
Q  1 tttttataatattgaataatttttt--gtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttg 95  Q
    |||||||| |||||||| |||||||  || ||||| ||||| ||||||   ||||  ||||||||||||| ||| ||||| |||||   | |||||||||    
T  50678758 tttttatattattgaattattttttttgttttataggatttatgtggaatgaaatactattttggtattttagacaacttgtacgtgagacaaaaagttg 50678857  T
Q  96 tgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaac 195  Q
    ||||||||||||||||| | ||||||  |   |||||||| |||   | ||||| |||||||| | |  ||||||||||||| ||||||||| |||  ||    
T  50678858 tgttgtggtttggtgagagacaaaaatatcagtttttgtcctgttctttgcctccagtttgtcctgtacctgaaacagtttttcaaatcaaacactggac 50678957  T
Q  196 aactt 200  Q
    |||||    
T  50678958 aactt 50678962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 25395577 - 25395673
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttg 95  Q
    |||||| | |||| || ||||||||| ||||||||||||| ||| || |||||||||||||||| |||||| ||||||||  ||| |||||||||||    
T  25395577 ttttatgacattgcattattttttgttttatacgatttttagtgaacaaaatgttattttggtattttagacaacttatatttaggataaaaagttg 25395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25954413 - 25954479
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac-aaatgttattttggtattt 66  Q
    ||||||| ||||||||||||||||| | ||||||| |||||| |||| ||||||||| || ||||||    
T  25954413 tttttatgatattgaataattttttattttatacgctttttggggacgaaatgttatattagtattt 25954479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10747179 - 10747220
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg 42  Q
    ||||||| | ||||||||||||||||| ||||||||||||||    
T  10747179 tttttatgacattgaataattttttgttttatacgatttttg 10747220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41695024 - 41694983
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg 42  Q
    ||||||| | ||||||||||||||||| ||||||||||||||    
T  41695024 tttttatgacattgaataattttttgttttatacgatttttg 41694983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 39918469 - 39918691
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgt 98  Q
    ||||||| |||||| ||||||| ||| |||||||||||||| || ||||| |||||||||||||||| ||| ||||| |||||   | |||||||||||     
T  39918469 ttttatagtattgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgc 39918568  T
Q  99 tgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaac 198  Q
    |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| | |||||||||||||||||||||||| |||  |||||    
T  39918569 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtatctgaaacagttttacaaatcaaacactggacaac 39918668  T
Q  199 ttaagttatcatgtcctgtcctt 221  Q
    |  |||| || ||||||||||||    
T  39918669 tagagttgtcttgtcctgtcctt 39918691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 2351651 - 2351864
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| || ||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  2351651 attgagtaattttttgttttgtacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 2351750  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| |||  || |||||||||||||||||||| ||| |||||||  |||| |    
T  2351751 gtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctataccttaaacagttttacaaatcaaacactgaacaactagagttgt 2351850  T
Q  208 catgtcctgtcctt 221  Q
    | ||||||||||||    
T  2351851 cctgtcctgtcctt 2351864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 32528686 - 32528899
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  32528686 attgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 32528785  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | | ||| |||||||| | |  ||||||||||||||||||||||| ||| |||||||  |||| |    
T  32528786 gtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgt 32528885  T
Q  208 catgtcctgtcctt 221  Q
    | |||| |||||||    
T  32528886 cctgtcatgtcctt 32528899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4689833 - 4689626
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||| ||||| ||    |||||||||||| |||||| ||  ||||| ||||| | | |||||||||||    
T  4689833 tttttatgacattgaataattttttgttttatacgacttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtg 4689734  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    ||||||||||||||||| ||||||  | | |||||||| ||||  | ||||| |||||||||| |  ||||||||||||||||||||||| |||  ||||    
T  4689733 ttgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaa 4689634  T
Q  198 cttaagtt 205  Q
    || |||||    
T  4689633 ctgaagtt 4689626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 41459560 - 41459750
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |||||||||| ||||| ||| ||||| ||||| ||| ||||||||||| | |||||||    
T  41459560 attgagtaattttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtggaacaaaaagttgtgctctggtttg 41459659  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| |||||| | | | |||| || ||||  | ||||| |||||||| | |  |||||||||||||||||||||||||||||||||||    
T  41459660 gtgagggacaaaaa-tatgagttttttcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaatactaaacaact 41459750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 8136810 - 8136987
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggacaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||| |||| |||||| |||||| |||||| | |||||| |||||||||||||||| ||| ||||| ||||||| | ||||||||||||||||||||||    
T  8136810 attgagtaatgttttgttttatactattttttggggacaa-tgttattttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttgg 8136908  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | | ||||||||||||||||||| ||||    
T  8136909 tgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtatctgaaacagttttacaaaacaaa 8136987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 34794858 - 34795039
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||| ||||| |||   ||||| ||||||||||||| ||| ||||||||||| | | ||||||||||| |||||||||    
T  34794858 attgaataattttttgttttatacgaattttggggaacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgatgtggtttg 34794957  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaata 189  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||||    
T  34794958 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaata 34795039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 28090655 - 28090466
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||| |||||| ||||||||||| |||||||||||||| || ||||| ||||||||| |||||| ||| ||||| ||||| | | |||||||||||    
T  28090655 tttttatattattgagtaattttttgttttatacgatttttgagggacaaaatgttatttttgtattttagacaacttgtacgtgggacaaaaagttgtg 28090556  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||| |||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||| ||| |  |||||||||||||||||||||||    
T  28090555 ttgtagtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgccttgtacctgaaacagttttacaaatcaaa 28090466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 8561106 - 8560910
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||| ||||||||||| |||||||||||||| |||| ||||||||||||||||||| ||| ||||| ||| | ||| ||||||||||| ||||||||||    
T  8561106 attgattaattttttgttttatacgatttttggggacgaaatgttattttggtattttagacaacttgtacctggaacaaaaagttgtgatgtggtttgg 8561007  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    |||||  ||||||  |   |||||||| ||||  | || |  |||||||| | | |||||||||||||||||||||||| ||| || |||| |||||    
T  8561006 tgaggaacaaaaatatcagtttttgtcttgtcctttgctttcagtttgtcctgtatctgaaacagttttacaaatcaaacactgaataactgaagtt 8560910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 31770716 - 31770501
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  31770716 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 31770617  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    |||||||  |||||  |   |||||||| ||||  | ||||| |||||||||| |   |||||||||||||||||||||| ||| |||||||  |||| |    
T  31770616 gtgagggataaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacatgaaacagttttacaaatcaaacactgaacaactagagttgt 31770517  T
Q  208 catgtcctgtccttta 223  Q
     ||||| |||||||||    
T  31770516 tatgtcatgtccttta 31770501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3735318 - 3735507
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||||||||||| | |||| |||||||||||||||| |||||| ||||| ||||| | | |||||||||||    
T  3735318 tttttatgacattgaataattttttgttttatacgatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtg 3735417  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||||||||||||| || ||||||  |   |||||||| |||| || ||||| | |||||| | |  ||||||| |||||||||||||||    
T  3735418 ctgtggtttggtgatggacaaaaatatcagtttttgtcctgtccattgcctccattttgtcatgtacctgaaacggttttacaaatcaaa 3735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 31880211 - 31880010
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||| ||| || ||||| || ||||||||||||| ||| ||||| ||||||| | ||| |||||||    
T  31880211 tttttatgacattgaataattttttgtattatacgattgttgggggacaaaatgctattttggtattttagacaacttgtacgtaggacaaatagttgtg 31880112  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||| ||||||| ||| |||||    
T  31880111 atgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttactaatcaaacactgaacaa 31880012  T
Q  198 ct 199  Q
    ||    
T  31880011 ct 31880010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 39788153 - 39788347
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg---acaaatgttattttggtattt-agataacttatacgtagaataaaaagttgt 96  Q
    |||||||  |||||| ||||||||||| |||||||||||||| ||   | |||||||||||| |||||| ||| ||||| ||||| | | ||||||||||    
T  39788153 tttttatggtattgagtaattttttgttttatacgatttttgggggacaaaaatgttattttagtattttagacaacttgtacgtgggacaaaaagttgt 39788252  T
Q  97 gttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatact 191  Q
    | |||||||||||||||| ||||||  |   |||||||| ||||  | ||||  |||||||| | |  |||||||||||||||||||||||||||    
T  39788253 gatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctacagtttgtcctgtacctgaaacagttttacaaatcaaatact 39788347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 553367 - 553557
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg--acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||| ||| |||||||||||||| ||  ||||| |||||||||||||||| ||| ||||| ||||| | | ||||||||||||||||||||    
T  553367 attgaataattttatgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttt 553466  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    |||||| | ||||||  |   |||||||| ||||| | ||||| |||||||| | |   ||||||||||||| |||||||| |||| ||||    
T  553467 ggtgagagacaaaaatatgagtttttgtcttgtctcttgcctccagtttgtcctgtacttgaaacagttttataaatcaaacactagacaa 553557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 24036201 - 24036314
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg--gacaaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| |  |  |||||||||||||||| |||||| ||||| ||||| | ||||||||||||| |||||||||    
T  24036201 attgaataattttttgttttatacgatttttggggtgcaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttg 24036300  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  24036301 gtgagggacaaaaa 24036314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 35701254 - 35701427
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||| |||||||| ||||||||||||||||||    
T  35701254 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttatgttgtggtttggtgagg 35701353  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  | |||||||||||||||||||||    
T  35701354 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccagaaacagttttacaaatcaaa 35701427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 40489308 - 40489521
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||| ||||||| || ||||| |||||||||||||||| ||| ||||| || || | | ||||||||||| |||| ||||    
T  40489308 attgagtaattttttgttttatacaatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtgatttg 40489407  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   ||||||||  |||  | ||||| |||||||||| |  ||||||||||||||||||||||| ||| ||||| |  ||||||    
T  40489408 gtgagggacaaaaatatgagtttttgtcccgtcccttgcctccagtttgtcttctacctgaaacagttttacaaatcaaacactgaacaattagagttat 40489507  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  40489508 tctgtcctgtcctt 40489521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 5571767 - 5571619
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggacaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggt 109  Q
    ||||| ||||||||||| |||||||||||||| ||   |||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||||    
T  5571767 attgagtaattttttgttttatacgatttttgggggacaatgctattttggtattttagacaacttgtacgttggacaaaaagttgtgttgtggtttggt 5571668  T
Q  110 gaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtc 158  Q
    ||||| ||||||  |  ||||||||| ||||  | ||||| ||||||||    
T  5571667 gagggacaaaaatatgaatttttgtcctgtcccttgcctccagtttgtc 5571619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 4818265 - 4818086
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||  || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  4818265 attgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 4818166  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| |||   | ||||| |||||||||| |  |||||||||||||||||||||||    
T  4818165 gtgagggacaaaaatatgagtttttgtcttgttccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 4818086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 7523152 - 7523322
Alignment:
Q  20 ttttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggc 116  Q
    |||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||||||||| |    
T  7523152 ttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggac 7523251  T
Q  117 aaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  7523252 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 7523322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 7770414 - 7770225
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| ||    |||||||||||| |||||| ||  ||||| ||||| | | |||||||||||    
T  7770414 tttttatgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtg 7770315  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||||||||||||| || ||||||  | | |||||||| ||||  | ||||| |||||||| | |  |||||||| ||||||||||||||    
T  7770314 ctgtggtttggtgaaggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaatcaaa 7770225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18470563 - 18470374
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| | |||||| || || ||||||||||||||| ||| ||| ||||| ||||| | |||||||||||||    
T  18470563 tttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggataaaaagttgtg 18470464  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||||||||||| |||| |||||| ||   |||||||| ||||  | ||||  |||||||  | || |||||||||||||||||||||||    
T  18470463 ctgtggtttggtaagggacaaaaatttcagtttttgtcttgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatcaaa 18470374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 21739280 - 21739107
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||| ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||||||||    
T  21739280 taattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 21739181  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  21739180 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 21739107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 207
Target Start/End: Complemental strand, 6284424 - 6284224
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttatttt-ggtatttag-ataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || |||||| ||||||| | | ||||| ||||| | | ||||||||||||||||||||    
T  6284424 attgagtaattttttgttttatacgatttttgagggacaaaatgctatttttggtattttggacaacttgtacgtgggacaaaaagttgtgttgtggttt 6284325  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtta 206  Q
    |||||||| ||||||| |   |||||||| ||||    ||||| |||||||| | |  ||||| ||||||||||||||||| |||  |||||| ||||||    
T  6284324 ggtgagggacaaaaaaataagtttttgtcctgtcccatgcctccagtttgtcctgtacctgaagcagttttacaaatcaaacactggacaactaaagtta 6284225  T
Q  207 t 207  Q
    |    
T  6284224 t 6284224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 41790587 - 41790409
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||| ||| |||||||||||||| || ||||| ||||||||| |||||| ||| || || |||||   | |||||||||||||||||||||    
T  41790587 attgagtaattttatgttttatacgatttttgggggacaaaatgttattttagtattttagacaatttgtacgtgagacaaaaagttgtgttgtggtttg 41790488  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||| ||| ||||| |||||||| | |  |||||||||||||||||||||||    
T  41790487 gtgagggacaaaaatatgagtttttgtcctgtttattgcctccagtttgtcctgt-actgaaacagttttacaaatcaaa 41790409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 7725934 - 7725836
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttgg-tatttagataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||||||| |||||||||||||| || || ||||| |||||||| |||||||| ||||||||||| | | ||||||||||||||||||||    
T  7725934 attgaataattttttgttttatacgatttttgggggacgaaatgctattttggatatttagacaacttatacgtgggacaaaaagttgtgttgtggttt 7725836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 11963312 - 11963525
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||| | | |||||||||||||| || ||||| || ||||||||||||| ||| |||||  |||| | | ||||||||||| |||||||||    
T  11963312 attgagtaattttgtattttatacgatttttgagggacaaaatgctattttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttg 11963411  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  11963412 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 11963511  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  11963512 tctgtcctgtcctt 11963525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 31644407 - 31644595
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||| ||| ||||| ||||||| | ||||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  31644407 tttttatgacattgaataattttatgttttatatgatttttaggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 31644506  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   | |||||| || || | ||||| |||||||| | |  |||||||||||||||||||||||    
T  31644507 ctgtggtttggtgagggacaaaaatatgagtatttgtcttg-ctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 31644595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 24181749 - 24181570
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| |||||| |||| ||||||||| |||| || ||||| || ||||||||||||| ||| ||||||||||| | | |||||||| || |||||||||    
T  24181749 attgagtaatttgttgttttatacgatctttgggggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttatgctgtggtttg 24181650  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | | ||| |||||||| | |  |||||||||||||||||||||||    
T  24181649 gtgagggacaaaaatatgagtttttgtcctgtcccttggctccagtttgtcctgtacctgaaacagttttacaaatcaaa 24181570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 7208355 - 7208242
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| |||   ||||| ||||||||||||| ||| ||||| |||||   | ||||||||||| |||||||||    
T  7208355 attgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttg 7208256  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  7208255 gtgagggacaaaaa 7208242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 22493537 - 22493431
Alignment:
Q  17 taattttttgtcttatacgatttttgtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggg 114  Q
    ||||||||||| |||||||||||||| ||||||| || ||||||| ||||| ||| ||||| |||||   | ||||||||||| ||||||||||||||||    
T  22493537 taattttttgttttatacgatttttgcggacaaaatgctattttgatattttagacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgaggg 22493438  T
Q  115 gcaaaaa 121  Q
     ||||||    
T  22493437 acaaaaa 22493431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 40182435 - 40182548
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| | |||||| || ||||||||||||| ||| ||||| ||| | | | ||||||||||| |||||||||    
T  40182435 attgagtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgatgtggtttg 40182534  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  40182535 gtgagggacaaaaa 40182548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 23091429 - 23091237
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| |||| |||||| |||||||||||||| || ||||| |||||||||| ||||| ||| || ||||||||   | |||||||||||||||||||||    
T  23091429 attgagtaatgttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaatttatacgtgagacaaaaagttgtgttgtggtttg 23091330  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaactt 200  Q
     ||| || ||||||  |   |||||||| ||||  | ||||| ||||| || | |  ||||||||||||||||||||||| |||  |||||||    
T  23091329 atgacggacaaaaatatgagtttttgtcttgtcccttgcctccagtttatcctgtacctgaaacagttttacaaatcaaacactggacaactt 23091237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 17031132 - 17031307
Alignment:
Q  15 aataattttttgtcttatacgattttt-gtggacaaat-gttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtga 111  Q
    |||||||||| |||||||| ||||||| |||||||||  | |||||| |||||| | ||||||| ||||| | |  |||||||||| |||| |||  |||    
T  17031132 aataatttttggtcttatatgattttttgtggacaaaaagctatttttgtattttaaataacttgtacgtgggacgaaaagttgtgctgtgatttaatga 17031231  T
Q  112 ggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||||| || | |||||||| ||||  | ||||| | |||||  | || |||||||||||||||||||||||    
T  17031232 ggggcaaaaatttatgtttttgtcctgtcctttgcctccaatttgtactgtccctgaaacagttttacaaatcaaa 17031307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 700681 - 700548
Alignment:
Q  54 tattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgag 152  Q
    ||||||||||||| ||||||||| |||||   | |||||||||||||||||||||||||||  ||||||  |  ||||||||  ||||  | | |||  |    
T  700681 tattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgaatttttgttttgtcccttgtctcttg 700582  T
Q  153 tttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||||||| |  ||||||||||||||||||||||    
T  700581 tttgtcttgtacctgaaacagttttacaaatcaa 700548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 29241349 - 29241462
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| ||||||| || |||||  ||||| ||||| | | ||||||||||| |||||||||    
T  29241349 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatattttagccaacttgtacgtgggacaaaaagttgtgctgtggtttg 29241448  T
Q  108 gtgaggggcaaaaa 121  Q
    | ||||| ||||||    
T  29241449 gcgagggacaaaaa 29241462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 5673189 - 5673223
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    |||||||||||||||||||||||||||| ||||||    
T  5673189 aaaaagttgtgttgtggtttggtgagggacaaaaa 5673223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 27839119 - 27839020
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttat-ttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatca 185  Q
    |||||||||| || |||||||||||||| ||||||  ||||| |||| || |||| || ||||  |||||||| | |  |||||||||||||||||||||    
T  27839119 aaaaagttgttttatggtttggtgagggacaaaaa--tttatgttttatcctgtccattgccttcagtttgtcatgtacctgaaacagttttacaaatca 27839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 32093067 - 32093001
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||| ||||||||||||| |||||| || ||||| | | ||||||||||| |||||||||||||||    
T  32093067 aaatgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 32093001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35954974 - 35955014
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt 41  Q
    |||||||  |||||||||||||||||||| |||||||||||    
T  35954974 tttttatggtattgaataattttttgtctaatacgattttt 35955014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 3259654 - 3259833
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | |||||||||||||||||||||||    
T  3259654 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttg 3259753  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||||||    
T  3259754 gtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 3259833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 3932965 - 3932774
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||||||||| |||||| ||||| ||||| | | ||||||||||| |||||||||    
T  3932965 attgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttg 3932866  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||| | ||||||  |   |||||||| || |  | ||||| |||||||| | |  ||||||||||||||||||||||| ||| |||||||    
T  3932865 gtgagagacaaaaatatgagtttttgtcctgccccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaact 3932774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 10324269 - 10324078
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||| | ||||||| |||||||||||||||| ||| ||||| |||||   | |||||||||||||||||||||    
T  10324269 attgagtaattttttgttttatacgattttttggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttg 10324170  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||| ||| ||| |||||||    
T  10324169 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaattaaacactgaacaact 10324078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 24242625 - 24242814
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  24242625 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 24242724  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   ||||||| |||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  24242725 atgtggtttggtgagggacaaaaatatgagtttttgttgtgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 24242814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 18597260 - 18597125
Alignment:
Q  64 tttagataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatc 163  Q
    |||||| ||||||||||| | | |||||||||||||||||||||||||||| |||||| ||    ||||||| ||||  | |||||  ||||||| ||||    
T  18597260 tttagacaacttatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctccggtttgtcatatc 18597161  T
Q  164 tctgaaacagttttacaaatcaaatactaaacaact 199  Q
     ||||||||||||||||||||||| ||| |||||||    
T  18597160 cctgaaacagttttacaaatcaaacactgaacaact 18597125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 24203334 - 24203512
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||| ||||||||||| |||||| |||||   ||||||| |||||||||||||||| ||| ||||| ||||| | | ||||||||||| ||||||||||    
T  24203334 attgagtaattttttgttttatacaattttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 24203433  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  || ||||||||||||||||||||    
T  24203434 tgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaa 24203512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 14808158 - 14808046
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtatttagataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||||||||||||| || |||||||||||||| ||    |||||||||||||||| ||||| ||| ||||||| | | ||||||||||||||||||||||    
T  14808158 attgaataatttttagttttatacgatttttgggggatgaaatgttattttggtacttagacaacctatacgtgggacaaaaagttgtgttgtggtttgg 14808059  T
Q  109 tgaggggcaaaaa 121  Q
    |||||| ||||||    
T  14808058 tgagggacaaaaa 14808046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 167091 - 166902
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| ||||| |||||||  || || ||||| ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  167091 tttttatgacattgagtaattttttgttttatatgatttttaagggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 166992  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||||||||| ||||||  |   |||||||  ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  166991 ttgtggtttggtgagggacaaaaatatgagtttttgttatgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 166902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 14925614 - 14925401
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggaca-aatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| ||||||||||||| | ||||  |||| ||||||||||||| ||| ||||| || || | | ||||||||||  |||||||||    
T  14925614 attgaataattttatgttttatacgatttttaggggacggaatgctattttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggtttg 14925515  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  |  | || |||||||| | |  ||||||||||||||||||||||| |||  |||||| ||||| |    
T  14925514 gtgagggacaaaaatatgagtttttgtcctgtcccttacatctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 14925415  T
Q  208 catgtcctgtcctt 221  Q
    ||||||||||||||    
T  14925414 catgtcctgtcctt 14925401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 34684136 - 34684028
Alignment:
Q  17 taattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt--agataacttatacgtagaataaaaagttgtgttgtggtttggtgag 112  Q
    ||||||||||| ||||||||||||||  ||||||| || |||||||||||||  ||| ||||| ||||| ||| ||||||||||||||||||||||||||    
T  34684136 taattttttgttttatacgatttttggaggacaaaatgctattttggtatttttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgag 34684037  T
Q  113 gggcaaaaa 121  Q
    || ||||||    
T  34684036 ggacaaaaa 34684028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 10485128 - 10485307
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||| | |||| ||||| ||||||| || |||||| ||||| ||||| | | ||||||||||| |||||||||    
T  10485128 attgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 10485227  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||| | ||||||||||||||    
T  10485228 ctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaataattttacaaatcaaa 10485307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 11613949 - 11613736
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| | | ||||| ||||| | | ||||||||||| |||||||||    
T  11613949 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttatacaacttgtacgtgggacaaaaagttgtgctgtggtttg 11613850  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| |||   | | ||| | |||||| | |  ||||||||||||||||||||||| |||  |||||| ||||| |    
T  11613849 gtgagggacaaaaatatgagtttttgtcctgttccttgtctccattttgtcctgtacctgaaacagttttacaaatcaaacactggacaactaaagttgt 11613750  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  11613749 tctgtcctgtcctt 11613736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 15277448 - 15277259
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||  ||||| |||||| |||| ||||||||||||||   |||||| || ||||||||||||| ||| ||||| ||||| | |||||||||||||    
T  15277448 tttttatagcattgagtaatttgttgttttatacgatttttggaagacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtg 15277349  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  || ||||| ||||||||||||||    
T  15277348 atgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccttaaacaattttacaaatcaaa 15277259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 31870258 - 31870145
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||| ||||| || || ||||| |||||| |||||| ||| ||| ||||||| | | |||||||||||||||||||||    
T  31870258 attgaataattttttgttttatacgagttttgggggacgaaatgctatttttgtattttagacaacctatacgtgggacaaaaagttgtgttgtggtttg 31870159  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  31870158 gtgagggacaaaaa 31870145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 32410020 - 32409831
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||||||||||||  |||| ||||  |||||||||| |||||| ||||| |  || | | |||||||||||    
T  32410020 tttttatgacattgaataattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtgagtgggacaaaaagttgtg 32409921  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | | ||| |||||||| | |  |||||||||||||||||||||||    
T  32409920 atgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaa 32409831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 2614867 - 2615046
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||| | |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  2614867 attgagtaattttttattttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 2614966  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | |  |||||||| ||||||||||||||    
T  2614967 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacaattttacaaatcaaa 2615046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 10959971 - 10960150
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||| || |||||| |||||||||||||| || ||||| || |||||| |||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  10959971 attgaatgatattttgttttatacgatttttgggggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 10960070  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   |||||||| ||||  | ||||  |||||||| | |  |||||||||||||||||||||||    
T  10960071 ttgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcctgtacctgaaacagttttacaaatcaaa 10960150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 15277095 - 15276916
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggt-atttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| ||||||||  |||| ||||| ||||||| |  |||||| ||||| ||||| | | ||||||||||| |||||||||    
T  15277095 attgagtaattttttgttttataagatttttgagggacaaaatgctattttgttcttttagacaacttgtacgtgggaaaaaaagttgtgatgtggtttg 15276996  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  15276995 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 15276916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 17867806 - 17867985
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| || || ||||| | | ||||||||||| |||||||||    
T  17867806 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttg 17867905  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   ||||| || ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  17867906 atgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 17867985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 17877589 - 17877768
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| || || ||||| | | ||||||||||| |||||||||    
T  17877589 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttg 17877688  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   ||||| || ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  17877689 atgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 17877768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 18057490 - 18057669
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| ||||||||||||| | |||| ||||| ||||||||||||| ||| ||||| ||||| | | ||||||||||  |||||||||    
T  18057490 attgaataattttatgttttatacgatttttagaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttg 18057589  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  |  | || |||||||| | | ||| ||||||||||||||||||||    
T  18057590 gtgagggacaaaaatatgagtttttgtcatgtcccttacatctagtttgtcatgtatctcaaacagttttacaaatcaaa 18057669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 32132538 - 32132359
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| |||||| |||| |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | ||||||||||||||||| |||    
T  32132538 attgagtaatttgttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggattg 32132439  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  || ||||||||||||||||||||    
T  32132438 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaa 32132359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 34176801 - 34176980
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||||||| ||||||  |||| ||||| | | ||||||||||| |||| ||||    
T  34176801 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagactacttgtacgtgggacaaaaagttgtgctgtgatttg 34176900  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||| | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  34176901 gtgagagacaaaaatatgagtttttgtcatgtcacttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 34176980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 8178030 - 8177861
Alignment:
Q  20 ttttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggc 116  Q
    |||||||| ||||| |||||||| || || ||||||||||||||||||| ||| |||||  |||| | | ||||||||||||||||||||||| |||| |    
T  8178030 ttttttgttttatatgatttttgggggacgaaatgttattttggtattttagacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagggac 8177931  T
Q  117 aaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| | |||||| || ||||  | ||||| ||||||| || |  |||||||||||||| ||||||||    
T  8177930 -aaaaatatcatttttatcctgtcccttgcctccagtttgttttgtacctgaaacagttttataaatcaaa 8177861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 11279100 - 11279278
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg--acaaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||| ||||||||||| |||| ||||||||| ||    ||||| |||||||||| |||||| ||||| |||||   | ||||||||||||||||||||||    
T  11279100 ttgagtaattttttgttttattcgatttttgagggataaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 11279199  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||| ||||||  |   |||||||| ||||    ||||| |||||||| | |   ||||||||||||||||||||||    
T  11279200 tgagggacaaaaatatgagtttttgtcctgtcccatgcctccagtttgtcctgtacttgaaacagttttacaaatcaaa 11279278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 11382040 - 11382139
Alignment:
Q  16 ataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgag 112  Q
    |||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| |||||   | ||||||||||||||||||||||||||    
T  11382040 ataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag 11382139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 17443233 - 17443440
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| ||||||||||||| | |||| ||||| |||||||||| |||||| ||||| ||||| | | ||||||||||  |||||||||    
T  17443233 attgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttg 17443332  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    |||||||  |||||  |   |||||||| ||||  | || || |||||||| | |  ||||||  ||||||||||||||| |||  |||||| ||||| |    
T  17443333 gtgagggataaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtacctgaaatggttttacaaatcaaacactggacaactaaagttgt 17443432  T
Q  208 catgtcct 215  Q
    | ||||||    
T  17443433 cctgtcct 17443440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 3290643 - 3290754
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||||||||| | |  ||||||||||||||||||||    
T  3290643 attgaataattgtttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttatacgtggga--aaaagttgtgttgtggtttg 3290740  T
Q  108 gtgaggggcaaaaa 121  Q
    || |||| ||||||    
T  3290741 gtaagggacaaaaa 3290754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 9613946 - 9614124
Alignment:
Q  12 ttgaataattttttgtcttatacgatt-tttgtggacaaatg-ttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||||||||||| || ||||| |||| |||||||||| | | ||||||| |||||| ||| ||||||||||| ||| ||||| |||||||| ||||| |    
T  9613946 ttgaataatttttggtgttatatgattatttgtggacagaagattattttagtattttagacaacttatacgtggaacaaaaaattgtgttgcggtttag 9614045  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||   |||||| ||  | ||||||| ||||  | ||||| ||||| || | ||  ||||||||||||||||||||||    
T  9614046 tgagtaacaaaaacttcaaattttgtcatgtcccttgcctccagtttatcctgtccttgaaacagttttacaaatcaaa 9614124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 11675455 - 11675341
Alignment:
Q  85 ataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatc 184  Q
    ||||||||||||||| |||||||||||| | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||    
T  11675455 ataaaaagttgtgttatggtttggtgagagacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatc 11675356  T
Q  185 aaatactaaacaact 199  Q
    ||| ||| |||||||    
T  11675355 aaacactgaacaact 11675341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 3379690 - 3379878
Alignment:
Q  20 ttttttgtcttatacgatttttgt-ggac-aaatgttattttggtattta-gataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggc 116  Q
    |||||||| ||||| ||||||||  |||| ||||| |||||||||||||| || ||||| || ||   | ||||||||||| | |||||||||||| | |    
T  3379690 ttttttgttttatatgatttttggaggacgaaatgctattttggtatttaagacaacttgtatgtgagacaaaaagttgtgctatggtttggtgagcgac 3379789  T
Q  117 aaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    |||||  |   |||||||| ||||| | ||||| |||||||| | | ||||||||||||||| |||||||| |||  |||||| |||||    
T  3379790 aaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtatctgaaacagttttataaatcaaacactggacaactaaagtt 3379878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 9902827 - 9902619
Alignment:
Q  1 tttttataatattgaataat-tttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgt 96  Q
    ||||||||| |||||||||  ||||||  ||||| |||||||| || || ||||||||||||||||||| ||| ||||| ||||| | | ||||||||||    
T  9902827 tttttataacattgaataaaatttttggtttatatgatttttgggggacgaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 9902728  T
Q  97 gttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaaca 196  Q
    | ||||||||  |||||| ||||||  |   |||||||| ||||  |  |||| |||||||| |||  |||||||||||  |||||| ||| ||| ||||    
T  9902727 gctgtggtttaatgagggacaaaaatatcagtttttgtcctgtcccttacctctagtttgtcctatacctgaaacagttcaacaaattaaacactgaaca 9902628  T
Q  197 acttaagtt 205  Q
    ||| |||||    
T  9902627 actgaagtt 9902619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 9200467 - 9200332
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatg-gcctcgagtttgtcttatctctgaaacagttttacaaatca 185  Q
    ||||||||||  | ||||||||||||||  || || |||| |||||||| ||||| |  ||||| |||||||| | ||| | ||||||||||||||||||    
T  9200467 aaaaagttgttatatggtttggtgagggagaagaatttttgtttttgtcttgtctcttagcctctagtttgtcatgtctttaaaacagttttacaaatca 9200368  T
Q  186 aatactaaacaacttaagttatcatgtcctgtcctt 221  Q
    || | |  ||||||| |||| ||||||| |||||||    
T  9200367 aacattgtacaacttgagttgtcatgtcttgtcctt 9200332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 29054327 - 29054506
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||| ||| ||||| |||||||| | ||| |||||||||||||   |||||| ||||| |||||   | ||||||||||| |||||||||    
T  29054327 tattgaataattttctgtattatatgatttttgggtgacgaaatgttattttgtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttg 29054426  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||| |||||| | |  |||||||| ||||  | || || | |||||| | |  ||||||| |||||||||||||||    
T  29054427 gcgagggacaaaaattgtagtttttgtcatgtcccttgcttccaatttgtcctgttcctgaaactgttttacaaatcaaa 29054506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 27756270 - 27756370
Alignment:
Q  5 tataatattgaataattttttgtcttatacgat-ttttgtgga-caaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgt 101  Q
    |||||||||||||||| ||| ||||| |||||| ||| |||||  ||||||||||||| || |||||| ||||||||||  | | |||||||||||||||    
T  27756270 tataatattgaataatctttggtcttgtacgatatttagtggataaaatgttattttgatattttagacaacttatacgggggacaaaaagttgtgttgt 27756369  T
Q  102 g 102  Q
    |    
T  27756370 g 27756370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 11212229 - 11212340
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||| ||||||||||| |||| ||||||||| || ||||| |||||||||||||||| ||| |||||  ||||   | |||| ||| |||||||||||||    
T  11212229 ttgagtaattttttgttttattcgatttttgagggacaaaatgttattttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttgg 11212328  T
Q  109 tgaggggcaaaa 120  Q
    |||||| |||||    
T  11212329 tgagggacaaaa 11212340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 4494234 - 4494160
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    ||||||||||| ||||||| ||| ||||| ||||| | | ||||||||||  |||||||||||||||| ||||||    
T  4494234 aaatgttatttcggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaa 4494160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 29036379 - 29036349
Alignment:
Q  272 tagttagtactccctccgtccctatatataa 302  Q
    |||||||||||||||||||||||||||||||    
T  29036379 tagttagtactccctccgtccctatatataa 29036349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 14925215 - 14925162
Alignment:
Q  168 aaacagttttacaaatcaaatactaaacaacttaagttatcatgtcctgtcctt 221  Q
    ||||| |||||||||||||| |||  |||||| ||||| |||||||||||||||    
T  14925215 aaacaattttacaaatcaaacactggacaactgaagttgtcatgtcctgtcctt 14925162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 5650742 - 5650679
Alignment:
Q  128 tttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatacta 192  Q
    |||||||||| ||||| ||||  |||||||||| || |||||| |||| ||||||||||||||||    
T  5650742 tttttgtcgtatctattgccttcagtttgtcttgtc-ctgaaatagttctacaaatcaaatacta 5650679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 39281874 - 39282087
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| ||||||||||||||  |||| ||||||||||||||||||| ||| ||||| ||||||| | ||||||||||  |||||||||    
T  39281874 attgaataattttatgttttatacgatttttggaggacgaaatgttattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttg 39281973  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | || || |||||||| | |  || |||||||||||||||||||| ||| ||||||| |||||||    
T  39281974 gtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtaccttaaacagttttacaaatcaaacactgaacaactgaagttat 39282073  T
Q  208 catgtcctgtcctt 221  Q
    | |||| |||||||    
T  39282074 cttgtcatgtcctt 39282087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 49303547 - 49303369
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||||| ||| ||||| ||||||| ||||||| ||||| ||||||||||    
T  49303547 attgagtaattttttgttttatacgatttttggggacaaaatgttattttagtattttagacaacttgtacgtaggataaaaaattgtgctgtggtttgg 49303448  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||| || ||||||  |   ||||| || ||||  | | ||| ||||||||||||  |||||||||||||||||||||||    
T  49303447 tgaaggacaaaaatatgagtttttctcttgtcccttgtctccagtttgtcttatacctgaaacagttttacaaatcaaa 49303369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 42512974 - 42512749
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaatgt-tattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| || |||||  | ||||||| ||||| ||| || || ||||||| | |||||||||||    
T  42512974 tttttatcacattgaataattttttgttttatacgatttttgggggacaaaattctattttgatattttagacaatttgtacgtaggacaaaaagttgtg 42512875  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    |||||||||| |||||  ||||||  |   |||||||| ||||| | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||    
T  42512874 ttgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaa 42512775  T
Q  198 cttaagttatcatgtcctgtccttta 223  Q
    || ||||| |  ||||||||||||||    
T  42512774 ctgaagttgttctgtcctgtccttta 42512749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 16386834 - 16387025
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  16386834 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttg 16386933  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| ||| |||||||    
T  16386934 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaact 16387025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 24339831 - 24339617
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggacaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt-gg 108  Q
    ||||||||||||||||| ||||||||| |||| ||   |||| ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||| ||    
T  24339831 attgaataattttttgttttatacgatgtttgggggacaatgctattttggtattttagacaacttgtacgtgggaaaaaaagttgtgttgtggttttgg 24339732  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatc 208  Q
    |||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||| ||||||||||| ||| |||||||  |||| |     
T  24339731 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttatacaaatcaaacactgaacaactagagttgtt 24339632  T
Q  209 atgtcctgtccttta 223  Q
     ||||||||||||||    
T  24339631 ctgtcctgtccttta 24339617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 844918 - 844705
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  844918 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 844819  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  844818 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 844719  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  844718 tctgtcctgtcctt 844705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 6711240 - 6711027
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||| |||||||||||||||    
T  6711240 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttg 6711141  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  6711140 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 6711041  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  6711040 tctgtcctgtcctt 6711027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 17887927 - 17888107
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg--acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||| |||||| |||| |||||||||||||| ||  ||||| |||||||||||||||| ||| ||||| ||||| | | ||||||||||||||||||||    
T  17887927 attgagtaatttgttgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttt 17888026  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    || ||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| |  |||||||||||||||||||||||    
T  17888027 ggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 17888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 26118409 - 26118196
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||| ||||| | | ||||||||||| |||| ||||    
T  26118409 attgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttttacgtgggacaaaaagttgtgctgtgatttg 26118310  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  26118309 gtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 26118210  T
Q  208 catgtcctgtcctt 221  Q
     ||||| |||||||    
T  26118209 tatgtcatgtcctt 26118196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 31004112 - 31004325
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||| |||||||| || || ||||  ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  31004112 attgaataattttttgttttataggatttttgggggacgaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 31004211  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||    ||||| |||||||| | |  ||||||||||||||||||||||| |||  |||||| ||||| |    
T  31004212 gtgagggacaaaaacatcagtttttgtcctgtcccgtgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgt 31004311  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  31004312 tctgtcctgtcctt 31004325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 16437342 - 16437521
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  16437342 attgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 16437441  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  16437442 gtgagggacaaaaatatgagtttttgtcctgtcctttgcctctagtttgtcctgtagctgaaacagttttacaaatcaaa 16437521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 45491069 - 45490890
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  45491069 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 45490970  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |   ||||||||||||||||||||||    
T  45490969 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacttgaaacagttttacaaatcaaa 45490890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 6029505 - 6029283
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| | |||||| || || ||||||||||||||| ||| ||| ||||| ||||| | | |||||||||||    
T  6029505 tttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtg 6029406  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
    ||||||||||||||||| |||||| ||   |||||||| ||||  | ||||  |||||||  | || ||||||||||||||||||||||| |||  ||||    
T  6029405 ttgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatcaaacactggacaa 6029306  T
Q  198 cttaagttatcatgtcctgtcct 220  Q
    ||  |||| |  |||||||||||    
T  6029305 ctggagttgttctgtcctgtcct 6029283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 7183898 - 7184108
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| | ||| ||||  ||| |||||| |||||| ||||| ||||||| | |||||||||||||||||||||    
T  7183898 attgagtaattttttgttttatacgatttttgagagacaaaatactatattggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttg 7183997  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    || |||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||| |||||| |||  |||||| |||||||    
T  7183998 gtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacatatcaaacactggacaactaaagttat 7184097  T
Q  208 catgtcctgtc 218  Q
      |||||||||    
T  7184098 tctgtcctgtc 7184108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 16451107 - 16451320
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| || || | | |||||||||||||||||||||    
T  16451107 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttg 16451206  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||| | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| | |  ||||||  |||| |    
T  16451207 gtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacattggacaactagagttgt 16451306  T
Q  208 catgtcctgtcctt 221  Q
     |||||||||||||    
T  16451307 tatgtcctgtcctt 16451320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 42510505 - 42510718
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||| ||||| | | ||||||||||| |||||||||    
T  42510505 attgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 42510604  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||| | ||||||  |   |||||||| ||||  | | ||| |||||||| | |  ||||||||||||||| ||||||| |||  ||||||  |||| |    
T  42510605 gtgagagacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacgaatcaaacactggacaactagagttgt 42510704  T
Q  208 catgtcctgtcctt 221  Q
    | ||||||||||||    
T  42510705 cctgtcctgtcctt 42510718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 35387505 - 35387326
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg--acaaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| ||    ||||| |||||||||| |||||| ||||| ||||| ||| ||||||||||| |||||||||    
T  35387505 attgagtaattttttgttttatacgatttttgagggataaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttg 35387406  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  |  |||| |||||||| | |  |||||||||||||||||||||||    
T  35387405 gtgagggacaaaaatatgagtttttgtcctgtcccttacctccagtttgtcctgtacctgaaacagttttacaaatcaaa 35387326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 41972898 - 41973070
Alignment:
Q  17 taattttttgtcttatacgatttttgtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggg 114  Q
    ||||||||||| ||||||||||||   ||||||| |||||||||||||||| ||| ||||| |||||   | ||||||||||  ||||||||||||||||    
T  41972898 taattttttgttttatacgattttgagggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggtgaggg 41972997  T
Q  115 gcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||||||  |   |||||||| ||||  | ||||| |||||||| | | ||||||||||||||||||||||||    
T  41972998 acaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtatctgaaacagttttacaaatcaaa 41973070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 13994270 - 13994055
Alignment:
Q  9 atattgaataattttttgtcttatacgatttttgtggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||||| ||| ||||| |||||||| |||| ||||| ||||||||||||| ||| ||||| ||| |   | ||||||||||||||||||||    
T  13994270 atattgaataattttatgttttatatgatttttggggacgaaatgctattttggtattttagacaacttgtacatgagacaaaaagttgtgttgtggttt 13994171  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtta 206  Q
    |||||||| |||||| ||   ||||||||  ||   | ||||| | |||||| | ||  |||||||||||||||||||||| |||  |||||| |||||     
T  13994170 ggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatgaaacagttttacaaatcaaacactggacaactgaagttg 13994071  T
Q  207 tcatgtcctgtccttt 222  Q
    |  |||||| ||||||    
T  13994070 ttctgtcctatccttt 13994055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 28340497 - 28340318
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| |||||   | ||||||||||| |||||||||    
T  28340497 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttg 28340398  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| |  |||||||||||||||||||||||    
T  28340397 atgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaa 28340318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 41968037 - 41967830
Alignment:
Q  17 taattttttgtcttatacgatttttgtg-gacaaatgt-tattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||| ||||||| | |||||| |  ||||||||||||| ||| ||||| |||||   | ||||||||||||||||||||||| |||    
T  41968037 taattttttgttttatacaatttttgggagacaaaaggctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagg 41967938  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtc 213  Q
    | ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||||||||||  ||||||  |||| |  ||||    
T  41967937 gacaaaaatatgagtttttgtcttgtctcttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaatactggacaactagagttgttctgtc 41967838  T
Q  214 ctgtcctt 221  Q
    ||||||||    
T  41967837 ctgtcctt 41967830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 1351621 - 1351416
Alignment:
Q  19 attttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagggg 115  Q
    ||||||||| ||||| |||||||| | |||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||||||||||||||||||||     
T  1351621 attttttgttttatatgatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaggga 1351522  T
Q  116 caaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtcct 215  Q
    ||||||  |   |||||||| |||   | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |  ||||||    
T  1351521 caaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcct 1351422  T
Q  216 gtcctt 221  Q
    ||||||    
T  1351421 gtcctt 1351416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 6144190 - 6144001
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||| ||| ||||| |||||||| | |||||| ||||||||| || ||| ||| ||||| ||||| | | |||||||||||    
T  6144190 tttttatggtattgaataattttctgttttatatgatttttgggtgacaaaatgttatttttgtgttttagacaacttctacgtgggagaaaaagttgtg 6144091  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||  ||||| |||||| |    |||||||| ||||  | ||||| |||||||| | |||||||||| |||||||||||||||    
T  6144090 ttgtggtttgccgagggacaaaaattgcagtttttgtcctgtcccttgcctccagtttgtcatgtctctgaaactgttttacaaatcaaa 6144001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 30105868 - 30105695
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||| || |||||||||||||||    
T  30105868 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagg 30105769  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  30105768 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctttacctgaaacagttttacaaatcaaa 30105695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 51264475 - 51264688
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||   ||||||| || |||||| |||||| | | ||||| ||||| | | |||||||||||||||||||||    
T  51264475 attgagtaattttttgttttatacgatttttaaaggacaaaatgctattttagtattttaaacaacttgtacgtgggacaaaaagttgtgttgtggtttg 51264574  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  ||||||    
T  51264575 gtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttat 51264674  T
Q  208 catgtcctgtcctt 221  Q
      |||| |||||||    
T  51264675 tctgtcttgtcctt 51264688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 15540094 - 15539871
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggt-atttagataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||||||| ||||| ||||||| | |||| |||||||||||||||  |||||| ||||| ||||||  | |||||||||||    
T  15540094 tttttatggtattgaataattttttgttttatatgatttttgggggacaaaatgttattttggtgttttagacaacttctacgtatgacaaaaagttgtg 15539995  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||  | |||||  ||    ||||||| ||||| | ||||| |||||||  | ||  |||||||||||||||||||||| |||  ||||    
T  15539994 ctgtggtttggtgaaagacaaaagtttcaggttttgtcctgtctcttgcctccagtttgttctgtccttgaaacagttttacaaatcaaacactggacaa 15539895  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  15539894 ctggagttgttctgtcctgtcctt 15539871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38663102 - 38663225
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||||||||||||  |||| ||||||||||||| || |||||| ||||| ||||| | | |||||||||||    
T  38663102 tttttatgacattgaataattttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtg 38663201  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
     ||||||||| |||||| ||||||    
T  38663202 ctgtggtttgctgagggacaaaaa 38663225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 50304621 - 50304844
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||||||||||| | |||| ||||| ||||||| || |||||| |||||| ||||   | |||||||||||    
T  50304621 tttttatgacattgaataattttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaacttaaacgtgagacaaaaagttgtg 50304720  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||  ||||| ||||||  |   |||||||| ||| | | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||    
T  50304721 ctgtggtttgcagagggacaaaaatatcagtttttgtcttgtttcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaa 50304820  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  50304821 ctggagttgttctgtcctgtcctt 50304844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 50382607 - 50382406
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||| |||||| ||||| |||||||| || ||||| ||||||||| || ||| ||| ||||| ||||| | | |||||||||||    
T  50382607 tttttatggtattgaataatattttgttttatatgatttttgagggacaaaatgttatttttgtgttttagacaacttgtacgtgggacaaaaagttgtg 50382508  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatgg---cctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaa 194  Q
    |||||||||||||| || |||||| ||   |||||||| |||| || |   |||| |||||||  | || |||||||||||||| |||||||| ||||||    
T  50382507 ttgtggtttggtgaaggacaaaaatttcagtttttgtcctgtccattgcctcctccagtttgttatgtccctgaaacagttttaaaaatcaaacactaaa 50382408  T
Q  195 ca 196  Q
    ||    
T  50382407 ca 50382406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 32270333 - 32270546
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| || ||||||| ||||| ||| ||||| ||| | | | ||||||||||| |||||||||    
T  32270333 attgagtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgctgtggtttg 32270432  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  32270433 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctctacctgaaacagttttacaaatcaaacactggacaactagagttgt 32270532  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  32270533 tctgtcctgtcctt 32270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 1601159 - 1601348
Alignment:
Q  17 taattttttgtcttatacgatttttg-tggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| || ||||||||||| |||||||| || ||||||||||||| ||| ||||| || || | | |||||||||||||||||||||||||||    
T  1601159 taattttttgttttgtacgatttttggtggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagg 1601258  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    | ||||||  |   |||||||  | ||  | ||||| |||||||| | |  ||||||| ||||||||||||||| ||| ||||||| |||||    
T  1601259 gacaaaaa--tgagtttttgttctatcccttgcctccagtttgtcctgtacctgaaaccgttttacaaatcaaacactgaacaactaaagtt 1601348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 25539836 - 25539948
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtatttagat-aacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||||||||||||||| |||||||||||||| || || ||||| |||||||||||||| |  ||||| || || | | ||||||||||||||||||||||    
T  25539836 ttgaataattttttgttttatacgatttttgggggacgaaatgctattttggtatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttgg 25539935  T
Q  109 tgaggggcaaaaa 121  Q
    |||||| ||||||    
T  25539936 tgagggacaaaaa 25539948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 32289547 - 32289359
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgt 98  Q
    |||||| | ||||||||||||| ||| |||||  ||||||| || ||||| || ||||||||||||| | | ||||| ||||| ||| |||||||||||     
T  32289547 ttttatgacattgaataattttatgttttatataatttttgagggacaaaatgctattttggtattttaaacaacttgtacgtggaacaaaaagttgtgc 32289448  T
Q  99 tgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | |  |||||||||||||||||||||||    
T  32289447 tgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 32289359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 5109748 - 5109899
Alignment:
Q  48 aaatgttattttggtatttagataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcc 147  Q
    |||||||||||||   |||||| ||||| ||| | | | ||||||||||| |||||||||||||||| ||||||  |   |||||||| ||||  | |||    
T  5109748 aaatgttattttgcattttagacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggacaaaaacatgagtttttgtcctgtcccttgcc 5109847  T
Q  148 tcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    || | |||||||| |  ||||||||||||||||||||||| ||| |||||||    
T  5109848 tccaatttgtcttgtacctgaaacagttttacaaatcaaacactgaacaact 5109899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 12890218 - 12890397
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtat-ttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||| ||||| ||||| ||||| | | ||||||||||| |||||||||    
T  12890218 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtatcttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 12890317  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||| ||||||  |   |||||||| ||||  | ||||| ||||| || | |  | |||||||||||||||||||||    
T  12890318 atgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttatcctgtaccagaaacagttttacaaatcaaa 12890397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 7837192 - 7837310
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| |||| |||||| | || |||||||||  ||||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||    
T  7837192 aaaaagttgtgatgtgatttggtaatggacaaaaaattcaatttttgtcatgtcccttgcctctagtttgtcatgttcctgaaacagttttacaaatcaa 7837291  T
Q  187 atactaaacaacttaagtt 205  Q
    | ||| ||||||| |||||    
T  7837292 acactgaacaactgaagtt 7837310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 221
Target Start/End: Complemental strand, 11772825 - 11772613
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtatttagat-aacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||||| ||||||||| |||||||||||||| || || ||||  |||||||||||||| |  || || || || | | ||||||||||| ||||||||||    
T  11772825 ttgaattattttttgttttatacgatttttgggggacgaaatactattttggtatttaaaacaatttgtaggtgggacaaaaagttgtgctgtggtttgg 11772726  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatc 208  Q
    |||||| ||||||  |   |||||||| ||||  | ||||| || ||| ||| |  ||||||||||||||||||||||| |||  ||||||  |||| |     
T  11772725 tgagggacaaaaatatcagtttttgtcttgtcctttgcctccagattgccttgtacctgaaacagttttacaaatcaaacactggacaactggagttgtt 11772626  T
Q  209 atgtcctgtcctt 221  Q
    |||||||||||||    
T  11772625 atgtcctgtcctt 11772613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 16704713 - 16704885
Alignment:
Q  18 aattttttgtcttatacgatttttgt-ggacaaat-gttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggg 114  Q
    |||||||||| ||||||||||||||  |||||||  | ||||||||||||| ||| ||||| || ||   | ||| ||||||| ||||||||||| ||||    
T  16704713 aattttttgttttatacgatttttggaggacaaaaagctattttggtattttagacaacttgtatgtgagacaaagagttgtgatgtggtttggtaaggg 16704812  T
Q  115 gcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||||||  | | |||||||||||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  16704813 acaaaaatatatgtttttgtcgtgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 16704885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 45658802 - 45659014
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtatttagat-aacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||||||||||||||| ||||| |||||||| || || ||||| |||||||||||||| |  ||||| || || | | ||||||||||||||||||||||    
T  45658802 ttgaataattttttgttttatatgatttttgggggacgaaatgctattttggtatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttgg 45658901  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatc 208  Q
    |||| | ||||||  |   |||||||| ||||  | | ||| |||||||| | |   |||||||||||||||||||| | |||| ||||||  |||| |     
T  45658902 tgagcgacaaaaatatcagtttttgtcttgtcctttgtctccagtttgtcctgtacttgaaacagttttacaaatcagacactagacaactggagttgtt 45659001  T
Q  209 atgtcctgtcctt 221  Q
     ||||||||||||    
T  45659002 ttgtcctgtcctt 45659014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 16476349 - 16476170
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||| ||| |||||| ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||  ||||||||    
T  16476349 attgaataattttatgttttatacaatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttg 16476250  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   ||||| || ||||  | || || |||||||| | |  |||||||||||||||||||||||    
T  16476249 gtgagggacaaaaatatgagtttttatcctgtcccttgcatctagtttgtcctgtacctgaaacagttttacaaatcaaa 16476170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 3560267 - 3560137
Alignment:
Q  85 ataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatc 184  Q
    |||||||||||||||||||||| || |||| |||||  ||  ||||||||  |||| || || |  |||||||| ||||||| | |||| ||||||||||    
T  3560267 ataaaaagttgtgttgtggtttagtaagggacaaaactttaaatttttgttttgtccattgctttcagtttgtcctatctctaagacagatttacaaatc 3560168  T
Q  185 aaatactaaacaacttaagttatcatgtcct 215  Q
    ||| | || | |||||||||| |||||||||    
T  3560167 aaacattatataacttaagttgtcatgtcct 3560137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 44738235 - 44738123
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    ||||| ||||||||||| |||||||||||||| |||  |||   ||||||| ||||| ||| ||||| ||||| | | ||||||||||| ||||||||||    
T  44738235 attgagtaattttttgttttatacgatttttgaggaataaaaactattttgctattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttgg 44738136  T
Q  109 tgaggggcaaaaa 121  Q
    |||||| ||||||    
T  44738135 tgagggacaaaaa 44738123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47093046 - 47093006
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  47093046 tttttataatattgaataattttttgccttatacgattttt 47093006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 39792800 - 39792999
Alignment:
Q  23 tttgtcttatacgatttttg-tggacaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaa 120  Q
    |||||||||||| ||||||| | || ||||||||||||  ||||| ||| || || |||||  || || |||||||||||||||||||||| || ||| |    
T  39792800 tttgtcttatacaatttttggttgataaatgttattttattattttagacaatttgtacgtgaaacaacaagttgtgttgtggtttggtgaaggacaaga 39792899  T
Q  121 aattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtcctgtcct 220  Q
    | ||  ||||||||| | ||| | | ||| | ||| |||| || || |||||||||| ||||||||| |||  ||||| |||||| |||| || ||||||    
T  39792900 atttcaatttttgtcatatcttttgtctccaatttatcttgtccctaaaacagttttgcaaatcaaacactgtacaacctaagttgtcatttcatgtcct 39792999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 50540324 - 50540503
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| |||||| |||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  50540324 attgagtaatttgttgttttatatgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 50540423  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     ||| || ||||||  |   ||| |||| ||||  | ||||| |||||||| | |  || ||||||||||||||||||||    
T  50540424 atgaaggacaaaaatatgagtttatgtcctgtcccttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaa 50540503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 2761758 - 2761624
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttgtggacaaatgt-tattttggta-tttagataacttatacgtagaataaaaagttgtgtt 99  Q
    ||||||| ||||||||||||||| || ||||| ||||||||| ||||||  | |||||| ||| ||||||||| || ||| |   | ||||| |||||||    
T  2761758 ttttatagtattgaataatttttggttttatatgatttttgttgacaaaaatctatttttgtattttagataatttgtacttgagacaaaaaattgtgtt 2761659  T
Q  100 gtggtttggtgaggggcaaaaaattttatttttgt 134  Q
    ||||||| |||||||  | |||||||| |||||||    
T  2761658 gtggtttagtgagggatataaaattttgtttttgt 2761624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 26764950 - 26764876
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    |||| |||||||||||||| ||| ||||| ||||| | | ||||||||||||||||||| |||||||| ||||||    
T  26764950 aaatattattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaa 26764876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 33316397 - 33316491
Alignment:
Q  10 tattgaataattttttgtcttatacga-tttttgtggacaaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtg 102  Q
    |||||||||||| || | ||||||||| |||||||||| ||||| |||||| ||| |||||| ||||| |||||  || ||||||||||||||||    
T  33316397 tattgaataattcttggccttatacgactttttgtggaaaaatgctatttttgtaatttagacaacttgtacgtgtaagaaaaagttgtgttgtg 33316491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 570368 - 570548
Alignment:
Q  13 tgaataattttttgtcttatacgatttttg-tggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg--ttgtggtttg 107  Q
    |||||| |||||| |||||||| ||||||| |||| ||| |||||||||| ||||| ||| ||||||||||    | |||||||||||  ||||||||||    
T  570368 tgaatacttttttatcttatacaatttttggtggaaaaaatgttattttgatattttagacaacttatacgcgagacaaaaagttgtgcattgtggtttg 570467  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgt-ctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| |||||| || | ||||| || ||| |  | ||||| ||||| |||| || |||||||| ||||| ||||||||    
T  570468 gtgagggacaaaaatttctgtttttatcatgtccctttgcctccagtttatcttgtcgctgaaacaattttataaatcaaa 570548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 10384347 - 10384460
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttg-gtatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||| ||||||| | |||| |||||||||||||  | ||||||||| || ||||| | | ||||||||||| ||||||||     
T  10384347 attgaataattttttgttttataagatttttgggggacgaaatgttattttgaatttttagataatttgtacgtgggacaaaaagttgtgctgtggttta 10384446  T
Q  108 gtgaggggcaaaaa 121  Q
    |||| || ||||||    
T  10384447 gtgaaggacaaaaa 10384460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 39739041 - 39738928
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtatt-tagataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||| |||||||||||| | | ||| ||| ||||||||| ||| ||||||||||  |||| ||||| ||| |||||||||||||||||    
T  39739041 tttttatggtattgaacaattttttgtctcaaatgatgtttagtggacaaaatgtaattttggtatcatagacaacttttacttagaataaaaagttgtg 39738942  T
Q  98 ttgtggtttggtga 111  Q
    ||| ||||| ||||    
T  39738941 ttgcggtttagtga 39738928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 46154870 - 46154979
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||| ||||||||  |||| |||||||||||||||| |||||| ||||| || || | | |||||||||||    
T  46154870 tttttatgacattgaataattttttgttttataagatttttgaaggacaaaatgttattttggtattttagacaacttgtaagtgggacaaaaagttgtg 46154969  T
Q  98 ttgtggtttg 107  Q
     ||| |||||    
T  46154970 ctgtagtttg 46154979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 7837433 - 7837553
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| |||| |||| | | || |||||||||  ||||||||| ||||    ||||| |||||||| | |  |||||||||||||| |||||||    
T  7837433 aaaaagttgtgatgtgatttgataatggacaaaaaattcaatttttgtcatgtcccctgcctctagtttgtcatgttcctgaaacagttttataaatcaa 7837532  T
Q  187 atactaaacaacttaagttat 207  Q
    | ||| ||||||| |||||||    
T  7837533 acactgaacaactgaagttat 7837553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 30798894 - 30798854
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttg 42  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  30798894 ttttatgatattgaataatttttggtcttatacgatttttg 30798854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 34663913 - 34664012
Alignment:
Q  17 taattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| ||||| |||||||| | |||||| |||||||||| ||||| ||| || ||||| || |   |||||||||||||||||||||||||||    
T  34663913 taattttttgttttatatgatttttgagtgacaaaatgttattttgatattttagacaatttataagtgggtcaaaaagttgtgttgtggtttggtgagg 34664012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 40610741 - 40610808
Alignment:
Q  48 aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggg 114  Q
    ||||||||||||||||||| ||| ||||||||  |   ||||||||||||||||||||||| ||||||    
T  40610741 aaatgttattttggtattttagacaacttatatatgtgataaaaagttgtgttgtggtttgatgaggg 40610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 42705426 - 42705319
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| ||||| |||||||| || ||||| || |||||||  |||| ||| ||||| ||||| | |  ||||||||||||||||||||||||||    
T  42705426 taattttttgttttatatgatttttgggggacaaaatgctattttgacatttcagacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagg 42705327  T
Q  114 ggcaaaaa 121  Q
    | ||||||    
T  42705326 gacaaaaa 42705319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 17327842 - 17327668
Alignment:
Q  12 ttgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttgg 108  Q
    |||| |||||| |||| |||||||||||||| || ||||| | |||||||||||||| |||||| || ||| |   | ||||||||||| |||| |||||    
T  17327842 ttgagtaatttgttgttttatacgatttttgggggacaaaatattattttggtattttagataatttgtacatgagacaaaaagttgtgctgtgatttgg 17327743  T
Q  109 tgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    |||||| ||||||  |   |||||||| ||||  | | ||| |||||||| | |  |||||||||||||||||||    
T  17327742 tgagggacaaaaatatgagtttttgtcctgtcccttgactccagtttgtcctgtacctgaaacagttttacaaat 17327668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 23799654 - 23799618
Alignment:
Q  85 ataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  23799654 ataaaaagttgtgctgtggtttggtgagggacaaaaa 23799618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 3913579 - 3913400
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||| |||||| |||||||||||||| |||   ||||| ||||||||||||| ||| ||||| ||||| ||| |||||||||||||||||||||    
T  3913579 attgaataatattttgttttatacgatttttggggagcaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgttgtggtttg 3913480  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| |||| |  |   |||||||| ||| | | ||||| |||||||| |||  |||||||||||||||||||||||    
T  3913479 gtgagggacaaacatgtgagtttttgtcctgtttcttgcctccagtttgtcatatacctgaaacagttttacaaatcaaa 3913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 9733049 - 9732836
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  9733049 attgaataattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 9732950  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  9732949 gtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 9732850  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  9732849 tctgtcctgtcctt 9732836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 32766624 - 32766444
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggac-aaatgttattttggtattt-agataacttatacgtagaataaaaa-gttgtgttgtggttt 106  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||| ||| ||| | ||||||| | ||||| |||||||||||||||    
T  32766624 attgaataattttttgttttatacgatttttggaggacgaaatgttattttggtattttagacaacctgtacgtaggacaaaaaagttgtgttgtggttt 32766525  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  32766524 ggtgagggacaaaaatatcagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 32766444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 33889204 - 33889427
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||| ||||||||||| ||||| |||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  33889204 tttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtg 33889303  T
Q  98 ttgtggtttggtgaggggcaaaaaatttta-tttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaaca 196  Q
     ||||||||||||||||  ||||||| | | |||||||| ||||  | ||||| |||||||| | | ||||||||| |||||||||||||| |||| |||    
T  33889304 atgtggtttggtgaggga-aaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtatctgaaacaattttacaaatcaaacactagaca 33889402  T
Q  197 acttaagttatcatgtcctgtcctt 221  Q
    |||  |||| |  ||||||||||||    
T  33889403 actagagttgttctgtcctgtcctt 33889427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 33366581 - 33366760
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||||||||| |||||| ||||| || || | | |||||||||||||||||||||    
T  33366581 attgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggagaaaaagttgtgttgtggtttg 33366680  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||  ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  33366681 gtgaggaacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 33366760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 35114762 - 35114969
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||| |||||||||||||||||||||    
T  35114762 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagg 35114861  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtc 213  Q
    | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||| ||||||  |||| || ||||    
T  35114862 gacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactagacaactagagttgtcctgtc 35114961  T
Q  214 ctgtcctt 221  Q
     |||||||    
T  35114962 ttgtcctt 35114969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 205
Target Start/End: Original strand, 41934551 - 41934749
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttg-tggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    |||||||| ||||| ||||||||| |||||||| |||||||| |||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  41934551 tattgaatgattttatgtcttatatgatttttggtggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgtgttgtggttt 41934650  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
     |||| |  ||| || ||   |||||||| ||||| | || || ||||| ||| ||| || || ||||||||||||||| | |||| ||||||| ||||    
T  41934651 agtgaagtacaagaatttcagtttttgtcttgtcttttgcatccagtttatctcatcccttaatcagttttacaaatcacacactatacaacttgagtt 41934749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7761702 - 7761479
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| |||||   | |||||||||||    
T  7761702 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 7761603  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||    
T  7761602 ctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaa 7761503  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  7761502 ctagagttgttctgtcctgtcctt 7761479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 30798602 - 30798428
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||||||||| ||||| | ||||||||||||| |||||||||||||||    
T  30798602 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggtgagg 30798503  T
Q  114 ggcaaaaa-attttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | |||||| ||    ||||| || ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  30798502 gacaaaaatatgagttttttttcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 30798428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 34338781 - 34338994
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| | ||| | | ||||||||||| |||||||||    
T  34338781 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtgcgtgggacaaaaagttgtgctgtggtttg 34338880  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  34338881 gtgagggtcaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 34338980  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  34338981 tctgtcctgtcctt 34338994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 5278953 - 5278774
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| || ||||||||||||| ||| ||||| ||||| | | ||||| ||||| |||||||||    
T  5278953 attgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtggtttg 5278854  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  5278853 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 5278774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 7258867 - 7259052
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg---acaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||| ||||||||||| |||||| ||||||| ||   | ||||||||||||||||||| ||| ||||| |||||   | ||||||||||| ||||||||    
T  7258867 attgagtaattttttgttttatacaatttttgagggacaaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggttt 7258966  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatacta 192  Q
    |||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| ||||    
T  7258967 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacacta 7259052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 12672593 - 12672414
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| || ||||||||||||| ||| ||||| ||| | | ||||||| |||||||||||||||    
T  12672593 attgagtaattttttgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacttgggataaaaacttgtgttgtggtttg 12672494  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |    |||||||  |||  | ||||| |||||||| |||  |||||||||||||||||||||||    
T  12672493 gtgagggacaaaaatatgagattttgtcccgtcccttgcctccagtttgtcctatacctgaaacagttttacaaatcaaa 12672414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 32497886 - 32498065
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| |||||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  32497886 attgagtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttg 32497985  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||  ||||||  |   |||||||| ||||  | ||||  |||||||| | |  |||||||||||||||||||||||    
T  32497986 gtgaggtacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaa 32498065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 44284600 - 44284791
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||| ||||| ||| ||||| |||||   | ||||||||||| ||||||||     
T  44284600 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttgttattttagacaacttgtacgtgagacaaaaagttgtgctgtggttta 44284699  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| |  ||||||||||||||||||||||| ||| |||||||    
T  44284700 gtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactgaacaact 44284791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 19513818 - 19513629
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||| ||||||||||| ||||| |||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  19513818 tttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 19513719  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | |||||  ||||||| | |  |||||||||||||||||||||||    
T  19513718 ctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctcccgtttgtcctgtacctgaaacagttttacaaatcaaa 19513629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 37003987 - 37003874
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||| | |||||||||||||| || ||||| |||||||||||||||| ||| || || ||||| | | |||||||||||||||||||||    
T  37003987 attgaataattttttattttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttg 37003888  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  37003887 gtgagggacaaaaa 37003874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 42365548 - 42365761
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| ||||||| | ||||||| |||||||||||||||| ||| ||||| | |||   |||||||||||||||||||||||    
T  42365548 attgagtaattttttgttttatatgatttttaggggacaaaatgttattttggtattttagacaacttgtccgtgatataaaaagttgtgttgtggtttg 42365647  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
     ||| || ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||| ||||||||||||||| |||| ||||||  |||| |    
T  42365648 atgaaggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcatgtacctgaaacggttttacaaatcaaacactagacaactagagttgt 42365747  T
Q  208 catgtcctgtcctt 221  Q
     ||||| |||||||    
T  42365748 tatgtcatgtcctt 42365761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 26981781 - 26981649
Alignment:
Q  56 ttttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtt 154  Q
    ||||||||||| ||| ||||| ||||||||| |||||||| ||||||||||||||||||| ||||||  |   |||||||| ||||  | |||||  |||    
T  26981781 ttttggtattttagacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcatttgcctcccgtt 26981682  T
Q  155 tgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||| | |||| |||||||||||||||||||    
T  26981681 tgtcttgtatctggaacagttttacaaatcaaa 26981649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 16104245 - 16104424
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| || || |||||   | ||||||||||| |||||||||    
T  16104245 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttg 16104344  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | | ||||||||||||||||||||||||    
T  16104345 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcgtgtatctgaaacagttttacaaatcaaa 16104424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 40832600 - 40832391
Alignment:
Q  1 tttttataatattgaataatt--ttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttg 95  Q
    |||||||| |||||||| |||  |||||| |||||||||||||| || || ||||  ||||||||||||| |||  |||| |||||   | |||||||||    
T  40832600 tttttatattattgaattattatttttgttttatacgatttttgggggacgaaatactattttggtattttagactacttgtacgtgagacaaaaagttg 40832501  T
Q  96 tgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaac 195  Q
    ||||||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| |  |||||| || ||||||||||||| |||  ||    
T  40832500 tgttgtggtttggtgagggacaaaaatatccgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaatagctttacaaatcaaacactggac 40832401  T
Q  196 aacttaagtt 205  Q
    ||||||||||    
T  40832400 aacttaagtt 40832391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 41366237 - 41366050
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggaca-aatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| |||||||||||||||  ||||||||  |||||| ||||| | |||||||||||||||||| ||| ||||| || ||   | ||||| |||||    
T  41366237 tttttatgatattgaataatttt--gtcttatataattttttgtggatacaatgttattttggtattttagacaacttgtatgtgagacaaaaaattgtg 41366140  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||||||||| |||||| ||   |||||||| | ||| | ||||| |||||||| | || ||||||| |||| ||||||||||    
T  41366139 ttgtggtttggtgagggacaaaaatttcagtttttgtcctatctcttgcctccagtttgtcatgtccctgaaactgtttcacaaatcaaa 41366050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 42706339 - 42706509
Alignment:
Q  20 ttttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggc 116  Q
    |||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| || || | | |||||||||||||||||||||||||||| |    
T  42706339 ttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggac 42706438  T
Q  117 aaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||  |   |||||||| | ||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  42706439 aaaaatatgagtttttgtcttatcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 42706509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 18685807 - 18686020
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| |||||||||  ||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  18685807 attgagtaattttttgttttataggatttttgagggacaaaatgttattttaatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 18685906  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||| | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  ||||||    
T  18685907 gtgagagacaaaaatatgagtttttgtcttgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttat 18686006  T
Q  208 catgtcctgtcctt 221  Q
      |||| |||||||    
T  18686007 tctgtcatgtcctt 18686020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 2645205 - 2645027
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| |||   ||||| ||||||||||||| ||| ||||| || || | | ||||||||||| |||||||||    
T  2645205 attgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtggtttg 2645106  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| | ||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  2645105 gtgagggacaaaaatatgagtttttgtcctctc-cttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 2645027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 6896129 - 6896349
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| |  ||||| || || ||||| ||||||||| ||| ||| ||||| ||||| | | |||||||||||    
T  6896129 tttttatggtattgaataatttcttgttttatatgccttttgggggacgaaatgctattttggtgttttagacaacttgtacgtgggacaaaaagttgtg 6896228  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     ||| |||||||||||| |||||| ||   ||||| || ||||  | ||||| ||||||| || || ||||||||||||||||||||||| |||  ||||    
T  6896229 ctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctccagtttgttttgtccctgaaacagttttacaaatcaaacactggacaa 6896328  T
Q  198 cttaagttatcatgtcctgtc 218  Q
    || ||||| |  |||||||||    
T  6896329 ctgaagttgttctgtcctgtc 6896349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 37308671 - 37308839
Alignment:
Q  54 tattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgag 152  Q
    ||||||||||||| ||| || || ||||| | | |||||||||||||||||||||||||||| ||||||  |   |||||||| ||||  | ||||| ||    
T  37308671 tattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccag 37308770  T
Q  153 tttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtcctgtcctt 221  Q
    |||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |  ||||||||||||    
T  37308771 tttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtcctt 37308839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 38623344 - 38623244
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||||||| |||||||||||||||| |||||| ||   |||||||| | || || ||||| |||||||| | || ||||||||||||||||||||||    
T  38623344 aaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctgtccctgaaacagttttacaaatcaa 38623245  T
Q  187 a 187  Q
    |    
T  38623244 a 38623244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 30712818 - 30713010
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgga-caaatgttattttggt-atttagataacttatacgtagaataaaaagttgtgt 98  Q
    |||||||  |||||||||||||||||| ||||| |||||||| |||  ||||| |||||||||  |||||| ||||| ||||| | ||||||||||||||    
T  30712818 tttttatggtattgaataattttttgttttatatgatttttggggatgaaatgatattttggtgttttagacaacttctacgtgggataaaaagttgtgt 30712917  T
Q  99 tgtgg----tttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||    ||||||||||| |||||| ||   ||| |||| ||||  | ||||| || ||||  | || |||||||||| ||||||||||||    
T  30712918 tgtggttaatttggtgagggacaaaaatttcagtttgtgtcctgtcccttgcctccaggttgttctgtccctgaaacagtattacaaatcaaa 30713010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 10399989 - 10399792
Alignment:
Q  11 attgaataattttttgtcttatacga-tttttgtggac-aaatgttattttgg-tatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| |||||||| |||| | |||| ||||| |||||||| | |||||| ||||||||| |   | ||||||||||||||||||||     
T  10399989 attgaataattttttgttttatacgacttttgggggacaaaatgctattttggatttttagacaacttatacatgagacaaaaagttgtgttgtggttta 10399890  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtt 205  Q
    |||| || ||||||  |   |||||||| ||| | | || || |||||||| | |  |||||| |||||||||||||||| ||| ||||||| |||||    
T  10399889 gtgaaggacaaaaatatgagtttttgtcctgtatcttgcatctagtttgtcctgtacctgaaatagttttacaaatcaaacactgaacaactgaagtt 10399792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 15303303 - 15303175
Alignment:
Q  64 tttagataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatc 163  Q
    |||||| |||||| | || ||| ||||||||||| ||| ||||| | | || |||||| || | |||||||| ||| | | ||||| |||||||| | ||    
T  15303303 tttagacaacttacatgtggaacaaaaagttgtgatgtagtttgataaaggacaaaaatttatgtttttgtcatgtgtcttgcctctagtttgtcctgtc 15303204  T
Q  164 tctgaaacagttttacaaatcaaatacta 192  Q
    |||||| ||||||||||||||||||||||    
T  15303203 tctgaagcagttttacaaatcaaatacta 15303175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 17540685 - 17540865
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttatttt-ggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |  |||||| ||||||| ||| ||||| ||||| | | ||||||||||| ||||||||    
T  17540685 attgagtaattttttgttttatacgatttttgagggacaaaatactatttttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggttt 17540784  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |   ||||||||||||||||||||||    
T  17540785 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacttgaaacagttttacaaatcaaa 17540865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 45463224 - 45463116
Alignment:
Q  15 aataattttttgtcttatacgatttttgtggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgag 112  Q
    ||||||||||||| ||||||||||| || |||| ||||||||||||| ||||| ||| ||  | ||||||  | ||||||||||||||||||||||||||    
T  45463224 aataattttttgttttatacgatttctggggacgaaatgttattttgatattttagacaatctgtacgtatgacaaaaagttgtgttgtggtttggtgag 45463125  T
Q  113 gggcaaaaa 121  Q
     | ||||||    
T  45463124 tgacaaaaa 45463116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 38993191 - 38992977
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    |||||||||||||| ||| |||||  ||||||| | ||| ||||| |||||| |||||| ||| ||||| ||||| | | ||||||||||||||||||||    
T  38993191 tattgaataattttctgtattatattatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttt 38993092  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtta 206  Q
    |  ||||  |||||| | |  |||||||| ||||  | ||||| |||||||| | |  ||||||| ||||||||||||||| |||  ||||||  |||||    
T  38993091 gacgaggaacaaaaattgtagtttttgtcctgtcccttgcctccagtttgtcctcttcctgaaactgttttacaaatcaaacactggacaactggagtta 38992992  T
Q  207 tcatgtcctgtcctt 221  Q
    |  |||| |||||||    
T  38992991 ttctgtcatgtcctt 38992977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 2086043 - 2086156
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||||||||||||||||| ||| ||||| |||||  || ||||||||||  |||||||||    
T  2086043 attgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtatttcagacaacttgtacgtgaaacaaaaagttgtactgtggtttg 2086142  T
Q  108 gtgaggggcaaaaa 121  Q
    |  |||| ||||||    
T  2086143 ggtagggacaaaaa 2086156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 4641477 - 4641682
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||  ||||| ||||||||||| |||||||||||||| |||   ||||| ||||||||||||| | | ||||| || ||   | |||||||||||    
T  4641477 tttttataccattgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttaaacaacttgtatgtgagacaaaaagttgtg 4641576  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||| | ||||||  |  ||||||||   |||     |||| |||||||||| |  ||||||||||||||||||||||| ||| |||||    
T  4641577 ctgtggtttggtgagagacaaaaatatgaatttttgttccgtccca--cctccagtttgtcttgtacctgaaacagttttacaaatcaaacactgaacaa 4641674  T
Q  198 cttaagtt 205  Q
    || |||||    
T  4641675 ctaaagtt 4641682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 12939410 - 12939306
Alignment:
Q  20 ttttttgtcttatacgatttttgtgg-acaaa-tgttattttggtat-ttagataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggc 116  Q
    |||||||| ||||| |||||||| || ||||| |||||||||||||| ||||| ||||| |||||   ||||||||||||| ||||||||||||| || |    
T  12939410 ttttttgttttatatgatttttgggggacaaaatgttattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggac 12939311  T
Q  117 aaaaa 121  Q
    |||||    
T  12939310 aaaaa 12939306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 26418900 - 26418999
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg--acaaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||| ||||||| ||    |||||||||||||||| |||||| ||||| ||||| | | ||||||||||| |||||||||||||||    
T  26418900 taattttttgttttatacaatttttgggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 26418999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 9717201 - 9717308
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| | |||||||||||| || ||||| |  ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||||||||    
T  9717201 taattttttgtttgatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 9717300  T
Q  114 ggcaaaaa 121  Q
    | ||||||    
T  9717301 gacaaaaa 9717308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13829399 - 13829522
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggt-atttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||  |||| ||||| |||||||||  |||||||||||| ||| | | | |||||||||||    
T  13829399 tttttatgatattgaataattttttgttttatatgatttttgagggacgaaatgatattttggtgttttagataacttgtacctgggacaaaaagttgtg 13829498  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
     |||||| | |||| || ||||||    
T  13829499 atgtggtctagtgatggacaaaaa 13829522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 27462844 - 27462808
Alignment:
Q  85 ataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27462844 ataaaaagttgtgttgtggtttggtgagggacaaaaa 27462808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 30326450 - 30326272
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||  |||||||||| |||||| ||||| |||||   | ||||||||||| |||||||||    
T  30326450 attgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttg 30326351  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    | ||| | ||||| | |   |||||||| ||||    ||||| |||||||| | |  |||||||||||||||||||||||    
T  30326350 gcgagagacaaaata-tgagtttttgtcctgtcccctgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 30326272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 25383101 - 25383142
Alignment:
Q  10 tattgaataattttttgtcttatacga-tttttgtggacaaa 50  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  25383101 tattgaataatttgttgtcttatacgattttttgtggacaaa 25383142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 38786653 - 38786544
Alignment:
Q  5 tataatattgaataattttttgtcttatacgatttt-tgtggacaaatgt-tattttggtatttagataacttatacgtagaataaaaagttgtgttgtg 102  Q
    |||||||||||||||||||| || || ||||||||| |  ||||||| || ||||||  |||||||| |||||||||||   | |||| |||||||| ||    
T  38786653 tataatattgaataatttttggtgttctacgattttgtacggacaaaagtctattttcatatttagacaacttatacgtgagacaaaatgttgtgttttg 38786554  T
Q  103 gtttggtgag 112  Q
    |||| |||||    
T  38786553 gtttagtgag 38786544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 9717329 - 9717385
Alignment:
Q  165 ctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtcctgtcctt 221  Q
    ||||||||||||||||||||||| ||| |||||||  |||| |  ||||||||||||    
T  9717329 ctgaaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtcctt 9717385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 28824599 - 28824563
Alignment:
Q  85 ataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  28824599 ataaaaagttgtgatgtggtttggtgagggacaaaaa 28824563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 37003853 - 37003797
Alignment:
Q  165 ctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtcctgtcctt 221  Q
    ||||||||| ||||||||||||| |||  ||||||| |||| | |||||||||||||    
T  37003853 ctgaaacagatttacaaatcaaacactggacaacttgagttgttatgtcctgtcctt 37003797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 40767207 - 40767255
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtc 135  Q
    |||||||| ||||||||||| ||||||| ||||||||||  ||||||||    
T  40767207 aaaaagttatgttgtggtttagtgagggacaaaaaatttagtttttgtc 40767255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1870099 - 1870301
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgt--ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgt 96  Q
    ||||||| | ||||| ||||||||||| ||||||||||||| |  ||||||| |||||||||| ||||| ||| ||||| ||||| | | ||||||||||    
T  1870099 tttttatgacattgagtaattttttgttttatacgatttttttagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 1870198  T
Q  97 gttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaaca 196  Q
    |||||||||||||||||| ||||||  |   |||||||| ||||  | ||||| ||||| |||| |  ||||||||||||||||||||||| ||| ||||    
T  1870199 gttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttatcttgtacctgaaacagttttacaaatcaaacactgaaca 1870298  T
Q  197 act 199  Q
    |||    
T  1870299 act 1870301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 21784846 - 21785037
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||| ||| ||||||||||||||  ||||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  21784846 attgagtaattttatgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 21784945  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaact 199  Q
    ||||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  ||||||||||||||||||||||| ||| |||||||    
T  21784946 gtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcatgtgcctgaaacagttttacaaatcaaacactgaacaact 21785037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 10932677 - 10932464
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||||||| |||||    
T  10932677 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttg 10932578  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| ||| |||||||  |||| |    
T  10932577 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgt 10932478  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  10932477 tctgtcctgtcctt 10932464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 29661288 - 29661477
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||  ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||||||| ||||||||| ||||| | |||||||||||||    
T  29661288 tttttatagcattgagtaattttttgttttatacgatttttgtgggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtg 29661387  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||| ||||| |||||||||||    
T  29661388 ctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaatcagttctacaaatcaaa 29661477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18386490 - 18386678
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  18386490 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 18386589  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| | |||||| | | ||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  18386590 ctgtggtttggtgagggac-aaaaatatgagttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaa 18386678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 44748676 - 44748885
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||| ||||||||||||||||    
T  44748676 taattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtattgtggtttggtgagg 44748775  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtc 213  Q
    | |||||| ||   |||||||  ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |  ||||    
T  44748776 gacaaaaatttgagtttttgttctgtcccttgcctctagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactagagttgttttgtc 44748875  T
Q  214 ctgtccttta 223  Q
    ||||||||||    
T  44748876 ctgtccttta 44748885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 41211321 - 41211107
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg---acaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||| ||||||||||| |||||||||||||  ||   | ||||| ||||||||||||| ||| ||||| ||||| | | ||||||||||| ||||||||    
T  41211321 attgagtaattttttgttttatacgattttttagggataaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggttt 41211222  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagtta 206  Q
    |||||||| ||||||  |   |||||||| ||||  | ||||| |||||||||| |  ||||||||||||||||||||||| |||   |||||| ||||     
T  41211221 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcttgtacctgaaacagttttacaaatcaaacactgggcaacttgagttg 41211122  T
Q  207 tcatgtcctgtcctt 221  Q
    |  ||||||||||||    
T  41211121 ttctgtcctgtcctt 41211107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 36769689 - 36769510
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| | |||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  36769689 attgagtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 36769590  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  36769589 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 36769510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43368166 - 43368389
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||| | || ||||| || ||||||| ||||| ||| ||||| ||||||| | |||||||||||    
T  43368166 tttttatcacattgaataattttttgttttatacgattttggagggacaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgtg 43368265  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     ||||||||| |||||  ||||||  |   ||||||||  |||| | ||||| |||||||| |||  ||||||||||||||||||||||| |||  ||||    
T  43368266 ctgtggtttgctgaggcacaaaaatatcagtttttgtcccgtctcttgcctccagtttgtcctatacctgaaacagttttacaaatcaaacactggacaa 43368365  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  43368366 ctggagttgttctgtcctgtcctt 43368389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 47953165 - 47953344
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  47953165 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 47953264  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  47953265 gtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 47953344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 38301308 - 38301496
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| | |||||||||||| || ||||| |||||||||| ||||| ||| ||||| | ||| | | |||||||||||    
T  38301308 tttttatgacattgaataattttttgtttaatacgatttttgggggacaaaatgttattttgatattttagacaacttgt-cgtgggacaaaaagttgtg 38301406  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||||| |||||| ||||||  |   |||||||| ||||| | ||||| |||||||| | |  |||||||||||||||||||||||    
T  38301407 ttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 38301496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 11322005 - 11321826
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  11322005 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 11321906  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||| |||||||||||||||||    
T  11321905 gtgagggacaaaaatatgagtttttgtcctgtccgttgcctccagtttgtcctgtacctgaatcagttttacaaatcaaa 11321826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 40753130 - 40753309
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||| ||||    
T  40753130 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttg 40753229  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  40753230 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 40753309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 329435 - 329624
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| |||||||| || ||||| || ||||||||| ||| ||  ||||| ||||| | | |||||||||||    
T  329435 tttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttaggcaacttgtacgtgggacaaaaagttgtg 329534  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| |||||| ||   |||||||| ||||  | ||||| |||||||  | || |||||||||||||||||||||||    
T  329535 atgtggtttggtgagggacaaaaatttcagtttttgtcttgtcctttgcctccagtttgttctgtccctgaaacagttttacaaatcaaa 329624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 26994345 - 26994132
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||  || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  26994345 attgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 26994246  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttat 207  Q
    ||||||| ||||||  |    ||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||| |||  ||||||  |||| |    
T  26994245 gtgagggacaaaaatatgagattttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactagagttgt 26994146  T
Q  208 catgtcctgtcctt 221  Q
      ||||||||||||    
T  26994145 tctgtcctgtcctt 26994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 3922823 - 3922648
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| || |||||||| |||||||||||||| || ||||| || ||||||||||||| ||||||||| ||||| | | ||||||||||| |||||||||    
T  3922823 attgagtatttttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgctgtggtttg 3922724  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    ||||||  ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||    
T  3922723 gtgaggaacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaat 3922648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 43158806 - 43158627
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggt-atttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| ||||||| |  |||||| ||||| ||||| | | |||||||||||||||||||||    
T  43158806 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 43158707  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    || |||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  43158706 gtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 43158627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 18470659 - 18470836
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||| |||||||| || ||||| |||||||||||||||| ||| ||||| ||||| | | |||||||| || |||||||||    
T  18470659 attgagtaattttttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttg 18470758  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||| | ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  18470759 gtgagagacaaaaatatgagtttttgtcctgtc--ttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 18470836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 9913500 - 9913678
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||| || ||||||||||||| | |||| |||||||||||||||| |||||| ||| | ||||| | | ||||||||||| |||||||||    
T  9913500 attgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttg 9913599  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||| | ||||| | |  ||||||||| ||||  | ||||| ||||| || | |  |||||| ||||||||||||||||    
T  9913600 gtgagcgacaaaata-tcaatttttgtcctgtcccttgcctctagtttatcctgtacctgaaatagttttacaaatcaaa 9913678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 9927188 - 9927366
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||| || ||||||||||||| | |||| |||||||||||||||| |||||| ||| | ||||| | | ||||||||||| |||||||||    
T  9927188 attgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttg 9927287  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||| | ||||| | |  ||||||||| ||||  | ||||| ||||| || | |  |||||| ||||||||||||||||    
T  9927288 gtgagcgacaaaata-tcaatttttgtcctgtcccttgcctctagtttatcctgtacctgaaatagttttacaaatcaaa 9927366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 23349421 - 23349298
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||| ||||||||||||||||| || ||||||| ||| || || |||||| ||||| |||||| ||| ||||| || || | | |||||||||||    
T  23349421 tttttataacattgaataattttttgttttctacgattgttgggggacgaaatgtcattttagtattttagacaacttgtatgtgggacaaaaagttgtg 23349322  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
    ||||||||||||||||| ||||||    
T  23349321 ttgtggtttggtgagggacaaaaa 23349298  T

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Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 26371929 - 26371750
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||| |||||| ||| |||||| ||||| ||||| | | ||||||||||| |||| ||||    
T  26371929 attgaataattttttgttttatacgatttttgagggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttg 26371830  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||| |||||| |||||||||    
T  26371829 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaatagttttgcaaatcaaa 26371750  T

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Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26652831 - 26652954
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||||||||||| | |||| ||||| ||||||| || |||||| ||||| ||||| | | |||||||||||    
T  26652831 tttttatgacattgaataattttttgttttatacgatttttggcggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 26652930  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
     ||||||||| |||||| ||||||    
T  26652931 ctgtggtttgctgagggacaaaaa 26652954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 46633672 - 46633846
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  46633672 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 46633771  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||  |||||  |   |||||||| |||      |||| |||||||| | | ||||||||||||||||||||||||    
T  46633772 gtgagggataaaaatatgagtttttgtcttgt-----tcctccagtttgtcctgtatctgaaacagttttacaaatcaaa 46633846  T

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Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 47316818 - 47316639
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || |||||||||| |||||| |||||  | ||   | |||||||||||||||||||||    
T  47316818 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtaatttagacaacttgcatgtgagacaaaaagttgtgttgtggtttg 47316719  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||| ||||||||||||||    
T  47316718 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaatcaaa 47316639  T

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Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 21408747 - 21408566
Alignment:
Q  9 atattgaataattttttgtcttatacgattttt-gtggacaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||   |||||| |||||| ||||||||| ||| |  ||||||||||| |||||||||||    
T  21408747 atattgaataattttttatcttatacgatttttagtggacgaaaactatttttgtattttagataacttgtacatgaaataaaaagttatgttgtggttt 21408648  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaata 189  Q
      |||||| ||||   |||| | |||||| ||||  | ||||| ||||||| || || |  |||||| |||||||||||||||    
T  21408647 aatgagggacaaatg-ttttgtctttgtcatgtcccttgcctccagtttgtgttgtcccaaaaacagctttacaaatcaaata 21408566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 30849366 - 30849188
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| |||||||||||||||| | | ||||| ||  | | | |||||||||||||||||||||    
T  30849366 attgagtaattttttgttttatacgatttttgggggacaaaatgttattttggtattttatacaacttgtatatgggacaaaaagttgtgttgtggtttg 30849267  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    ||||||| ||||||  |   |||||||| ||||  | ||| | |||||||| | |  || |||||||||||||||||||    
T  30849266 gtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagtttgtcctgtacctaaaacagttttacaaatcaa 30849188  T

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Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 30599138 - 30598953
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| |||||| |||| ||||||||||||| | ||||||| |||||||||||||||| |||||| || ||| |   | |||||||||||    
T  30599138 tttttatgaaattgagtaatttgttgttttatacgatttttaggggacaaaatgttattttggtattttagataatttgtacttgagacaaaaagttgtg 30599039  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    |||||||||| |||||| ||||||  |    ||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||    
T  30599038 ttgtggtttgatgagggacaaaaatatgagcttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaat 30598953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 32873889 - 32873776
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| |||||   | |||||||||||||||||||||    
T  32873889 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgagacaaaaagttgtgttgtggtttg 32873790  T
Q  108 gtgaggggcaaaaa 121  Q
    |||| || ||||||    
T  32873789 gtgaaggacaaaaa 32873776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 43189317 - 43189249
Alignment:
Q  54 tattttggtatt-tagataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggcaaaaa 121  Q
    |||||||||||| |||| ||||| ||||| | |||||||||||||||||||||||||||||| ||||||    
T  43189317 tattttggtattctagacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaa 43189249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34295534 - 34295411
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| ||||| |||||||| || ||||| || ||||||| ||||| ||| ||||| ||||| | | |||||||||||    
T  34295534 tttttatgacattgaataattttttgttttatatgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 34295435  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
     ||||||||| |||||| ||||||    
T  34295434 ctgtggtttgctgagggacaaaaa 34295411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 3892146 - 3892033
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtatt-tagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||| |||||||||| |||   ||||| |||||||||||| |||| ||||| ||||||| | ||||||||||| |||| ||||    
T  3892146 attgagtaattttttgttttacacgatttttgaggaacaaaatgctattttggtattctagacaacttgtacgtaggacaaaaagttgtgctgtgatttg 3892047  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||| | ||||||    
T  3892046 gtgagagacaaaaa 3892033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 37966939 - 37967045
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgt-ggac-aaatgttattttgg-tatttagataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||| ||||||||||||| ||||||||||||| | |||| ||||| |||||||| | |||||||||||| ||||| ||| |||||||||||    
T  37966939 tttttatggtattaaataattttttgttttatacgatttttttgggacgaaatgctattttggatttttagataacttgtacgtggaacaaaaagttgtg 37967038  T
Q  98 ttgtggt 104  Q
     ||||||    
T  37967039 atgtggt 37967045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 34117427 - 34117540
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    |||||||||||||| || |||||||||||||| || || ||||| |||||||| |||| ||| ||||| ||| | ||| ||||| ||||| |||||||||    
T  34117427 attgaataatttttcgttttatacgatttttgggggacgaaatgctattttggcattttagacaacttgtacatggaacaaaaaattgtgatgtggtttg 34117526  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  34117527 gtgagggacaaaaa 34117540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 46448764 - 46448651
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttgg-tatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||| ||||||| | |||| |||||||||||||| | ||||||||| |||||| | | | ||||||||||| ||||||||     
T  46448764 attgaataattttttgttttataagatttttaggggacgaaatgttattttggatttttagataatttatacatgggacaaaaagttgtgctgtggttta 46448665  T
Q  108 gtgaggggcaaaaa 121  Q
    |||| || ||||||    
T  46448664 gtgacggacaaaaa 46448651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 22631722 - 22631826
Alignment:
Q  20 ttttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgaggggc 116  Q
    |||||||| |||||||||||||| || || |||| | |||||||||||| ||| ||||| |||||| || |||||||| |||||||||||||||| || |    
T  22631722 ttttttgttttatacgatttttgggggacgaaatatcattttggtattttagacaacttgtacgtataacaaaaagttatgttgtggtttggtgaaggac 22631821  T
Q  117 aaaaa 121  Q
    |||||    
T  22631822 aaaaa 22631826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15035383 - 15035268
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgattttt-gtggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||||||| || |||||||||| |||| | ||||||||||||| || |||||| || || || || | | |||||||||||    
T  15035383 tttttatggtattgaataattttttgttttgtacgatttttggtgggcaaaatgttattttgatattttagacaatttgtatgtggtacaaaaagttgtg 15035284  T
Q  98 ttgtggtttggtgagg 113  Q
    ||||||| ||||||||    
T  15035283 ttgtggtctggtgagg 15035268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 17237051 - 17237154
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttgg-tatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||| ||||||| | |||| |||||||||||||| | ||||||||| || |||||   | ||||||||||||||||||||     
T  17237051 attgaataattttttgttttataagatttttgggggacgaaatgttattttggatttttagataatttgtacgtgagacaaaaagttgtgttgtggttta 17237150  T
Q  108 gtga 111  Q
    ||||    
T  17237151 gtga 17237154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 43214055 - 43213932
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattta-gataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||| ||||||||| ||||| |||||||| || || ||||| |||||||||||||  || ||||| || || | | |||||||||||    
T  43214055 tttttatgacattgaatcattttttgttttataggatttttgaggcacgaaatgctattttggtatttttgacaacttgtatgtgggacaaaaagttgtg 43213956  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
    |||||||||||||| || ||||||    
T  43213955 ttgtggtttggtgaaggacaaaaa 43213932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 48699372 - 48699479
Alignment:
Q  10 tattgaataattttttgtcttatacgattttt-gtggacaaatgt-tattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    |||||||| | |||| ||||| |||||||||| ||||||| | || ||||||||||||| ||| ||||| ||||| ||| ||| ||||||||||||||||    
T  48699372 tattgaatgacttttggtcttgtacgattttttgtggacataagtctattttggtattttagacaacttgtacgtggaacaaatagttgtgttgtggttt 48699471  T
Q  107 ggtgaggg 114  Q
     |||||||    
T  48699472 agtgaggg 48699479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 22724162 - 22723973
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||| ||| ||||| |||||||| | ||| ||||| |||||| |||||| | | ||||| ||||| | ||||||||||| |    
T  22724162 tttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttatacaacttgtacgtgggataaaaagttgcg 22724063  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||| || || |||| | |    |||||||| ||||  |  |||||||||||||   || ||||||| |||||||||||||||    
T  22724062 ttgtggtttggcgatggacaaacattgcagtttttgtcctgtcccttacctcgagtttgtccggtccctgaaactgttttacaaatcaaa 22723973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 46408864 - 46408977
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gacaa-atgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||| | |||||||||||||| | ||||| ||| ||||||| ||||| ||| ||||| || || | | ||||||||||| |||||||||    
T  46408864 attgagtaattttttattttatacgatttttgagagacaatatgctattttgatattttagacaacttgtatgtcggacaaaaagttgtgctgtggtttg 46408963  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  46408964 gtgagggacaaaaa 46408977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 3359970 - 3359930
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttg 42  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  3359970 ttttatgatattgaataattttttgtcttatactatttttg 3359930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 11250671 - 11250767
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaat 183  Q
    |||||||||||||||||||||||||||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||| ||||||||||    
T  11250671 aaaaagttgtgttgtggtttggtgagggacaaaaatatgattttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaat 11250767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 22724652 - 22724472
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttgtg-gac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    |||||||||||||| ||| ||||| |||||||| | ||| ||||| |||||| |||||| ||| ||||| ||||| | | | ||||||| | ||||||||    
T  22724652 tattgaataattttctgtattatatgatttttgggcgacgaaatgctatttttgtattttagacaacttgtacgtgggacataaagttgcgctgtggttt 22724553  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||| |||||| |     ||||||| | ||  | ||||| |||||||| | || ||||||| |||||||||||||||    
T  22724552 ggtgagggacaaaaattgcagcttttgtcatatcccttgcctccagtttgtcctgtccctgaaactgttttacaaatcaaa 22724472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 34519562 - 34519698
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||||||||||||||||||||| ||||| |||||| |    |||||||| ||||  | ||||| || ||||| | || ||||||| ||||||||| || |    
T  34519562 aaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagcttgtcatgtccctgaaactgttttacaattcga 34519661  T
Q  187 atactaaacaacttaagttatcatgtcctgtccttta 223  Q
    | |||  |||||| ||||| |  ||||||||||||||    
T  34519662 acactggacaactgaagttgttctgtcctgtccttta 34519698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 48894692 - 48894795
Alignment:
Q  11 attgaataattttttgtcttatacgattttt-gtggac-aaatgttattttgg-tatttagataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||||||||||||||| ||||| ||||||| | |||| |||||||||||||| | ||||||| | || ||||| | | ||||||||||| ||||||||     
T  48894692 attgaataattttttgttttataagatttttgggggacaaaatgttattttggatttttagatgatttgtacgtgggacaaaaagttgtgatgtggttta 48894791  T
Q  108 gtga 111  Q
    ||||    
T  48894792 gtga 48894795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 21408422 - 21408328
Alignment:
Q  9 atattgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttg 100  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||| ||| |||| ||| |||| | ||||||||||||| | ||||| ||||||||    
T  21408422 atattgaataattctttgtcttatacaatttttgatggacaaaaggttcttttcgtattttaaacaacttatacgtaggacaaaaaattgtgttg 21408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 35645478 - 35645528
Alignment:
Q  64 tttagataacttatacgtagaataaaaagttgtgttgtggtttggtgaggg 114  Q
    |||||| ||||| ||||||  |||||||||||||||||||||| |||||||    
T  35645478 tttagacaacttgtacgtacgataaaaagttgtgttgtggtttagtgaggg 35645528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 29372900 - 29372767
Alignment:
Q  10 tattgaataattttttgtcttatacgatttttg-tggacaaatg-ttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    |||| |||||||||| |||||||| |||||||| |||| ||| | ||| ||||  |||| ||| ||||| ||| | ||| | ||||||||||||||||||    
T  29372900 tattaaataatttttggtcttatatgatttttggtggataaaaggttaatttgaaattttagacaacttgtacatggaacagaaagttgtgttgtggttt 29372801  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtc 140  Q
     |||| || |||||| |||  |||||||||||||    
T  29372800 agtgacggacaaaaattttagtttttgtcgtgtc 29372767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44668772 - 44668813
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg 42  Q
    |||||||| |||| ||||||||||| ||||||||||||||||    
T  44668772 tttttatagtattaaataattttttatcttatacgatttttg 44668813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 47947735 - 47947824
Alignment:
Q  11 attgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||| ||||||||||| ||||||||||||||  |||| ||||| |||||||||| |||||| ||||| ||||| | | |||||||||||    
T  47947735 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 47947824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 16027902 - 16027842
Alignment:
Q  153 tttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtc 213  Q
    |||||||| ||| ||||||| |||||||||||||| |||| ||||||  ||||||| ||||    
T  16027902 tttgtcttgtctttgaaacaattttacaaatcaaacactatacaactagagttatcttgtc 16027842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 1778 - 1589
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-ac-aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  |||||||||||||||||| ||||| || ||||| || || ||||| ||||||||| ||| ||| ||||| ||||| | | |||||||||||    
T  1778 tttttatggtattgaataattttttgttttatatgacttttgagggacgaaatgctattttggttttttagacaacttgtacgtgggacaaaaagttgtg 1679  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||||||||| |||||| ||   |||||||| ||||  | ||||| |||||||| ||||  ||||||||||||||||||||||    
T  1678 ttgtggtttggtgagggacaaaaatttcagtttttgtcttgtcccttgcctccagtttgtcctatccttgaaacagttttacaaatcaaa 1589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18189 - 18000
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||  ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  18189 tttttatagcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 18090  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||||||||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | |  |||||||||||||||||||||||    
T  18089 ttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcatgtacctgaaacagttttacaaatcaaa 18000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 12671 - 12548
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||||  ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  12671 tttttatagcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 12572  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
    ||||||||||||||||| ||||||    
T  12571 ttgtggtttggtgagggacaaaaa 12548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 23548 - 23725
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtggacaaatgttattttggta-tttagataacttatacgtagaataaaaagttgtgttgtggtttggt 109  Q
    ||||| ||||||||||| |||||||||||||| ||   ||||||||||||||| |||||| ||||| ||||| | | ||||||||||| |||||||||||    
T  23548 attgagtaattttttgttttatacgatttttgagggacaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 23647  T
Q  110 gaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    || || ||||||  |   |||||||| ||||  | ||||| |||||||| | |  |||||||||||||||||||||||    
T  23648 gaaggacaaaaatatgagtttttgtcatgtcccttgcctcaagtttgtcctgtacctgaaacagttttacaaatcaaa 23725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 5575 - 5367
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggac--aaatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||||||||||||||| |||||||||||||| ||    |||||||||||| |||||| ||  ||||| || || | | |||||||||||    
T  5575 tttttatgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtatgtgggacaaaaagttgtg 5476  T
Q  98 ttgtggtttggtgaggggcaaaaa-attttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaaca 196  Q
     |||||||||||||||| |||||| || |  |||||||| ||||  | ||||| |||||||||| |  ||||||||||||||||||||||| |||  |||    
T  5475 atgtggtttggtgagggacaaaaatatgtgttttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggaca 5376  T
Q  197 acttaagtt 205  Q
    ||| |||||    
T  5375 actgaagtt 5367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 19215 - 19038
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgt-ggacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| ||||||||||||||  ||||||| |||||||||||||||| ||| ||||| ||||| | | ||||||||||| |||| ||||    
T  19215 attgagtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttg 19116  T
Q  108 gtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    ||||||| | |||||| | | ||||||| ||||| | ||||| |||||||| | |  ||| |||||||||||||||||||    
T  19115 gtgagggac-aaaaatatgagttttgtcctgtctcttgcctccagtttgtcctgtacctg-aacagttttacaaatcaaa 19038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 15512 - 15393
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtggacaaatgttattttggtattt-agataacttatacgtagaataaaaagttgtgtt 99  Q
    ||||||| | ||||| ||||||||||| |||||||||||||| |||  |||| ||||||||||||| ||| ||||| ||| | | | |||||||||||||    
T  15512 tttttatgacattgagtaattttttgttttatacgatttttgagga--aatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgtt 15415  T
Q  100 gtggtttggtgaggggcaaaaa 121  Q
    ||||||||||||||| ||||||    
T  15414 gtggtttggtgagggacaaaaa 15393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 13706 - 13534
Alignment:
Q  9 atattgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggtatt-tagataacttatacgtagaataaaaagttgtgttgtggtt 105  Q
    ||||||| ||||| || ||||||||||||||||| ||||| ||||  |||||||||||| |||| ||||| ||| |   | |||||||||||| ||  ||    
T  13706 atattgattaattattggtcttatacgatttttgatggacaaaatactattttggtattctagacaacttgtacatgtgacaaaaagttgtgtcgtattt 13607  T
Q  106 tggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagtttta 178  Q
    | ||||| | || ||| ||  ||||||||| ||||||| ||||| | |||||||| ||||||||| |||||||    
T  13606 tagtgagagacacaaatttcaatttttgtcatgtctattgcctccaatttgtcttctctctgaaatagtttta 13534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 373089 - 372976
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||||| |||||||    
T  373089 attgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaaagttgtgttatggtttg 372990  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  372989 gtgagggacaaaaa 372976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 2614 - 2402
Alignment:
Q  17 taattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttggtgagg 113  Q
    ||||||||||| |||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||   || ||||||||||||||||||| |||    
T  2614 taattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtacgt-gagacaatagttgtgttgtggtttggttagg 2516  T
Q  114 ggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaacttaagttatcatgtc 213  Q
    | |||| |  |   |||||||| ||||  |  |||| | |||||||| |  ||||||||||||||||||||||| ||| |||||||  |||| | |||||    
T  2515 gacaaagatatgagtttttgtcctgtccctttcctccaatttgtcttgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttatgtc 2416  T
Q  214 ctgtcctttaattt 227  Q
     ||||||| |||||    
T  2415 ttgtccttcaattt 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 2473 - 2284
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-acaaatgt-tattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| ||||| ||||||| ||| |||||    ||||||||||||| ||| ||||| ||||| | | |||||||||||    
T  2473 tttttatgacattgagtaattttttgttttataggatttttatgggacaaaaaactattttggtattttagacaacttgtacgtgggacaaaaagttgtg 2374  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
     |||||||||||||||| ||||||  |   |||||||| ||||  | ||||| | |||||| | |  |||||||||||||||||||||||    
T  2373 ctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaa 2284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 101920 - 102033
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtgg-acaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||  || ||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||||||||    
T  101920 attgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttg 102019  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  102020 gtgagggacaaaaa 102033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 43075 - 42896
Alignment:
Q  10 tattgaataattttttgtcttatacgatt-tttgtggacaa-atgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggttt 106  Q
    ||||||||||||| |||| ||||| |||| |||| |||||| ||| ||||||||| ||| ||| || || ||||| | | ||||||||||||||||||||    
T  43075 tattgaataatttcttgttttatatgattgtttggggacaacatgctattttggtgttttagacaa-ttgtacgtgggacaaaaagttgtgttgtggttt 42977  T
Q  107 ggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaa 187  Q
    |||||||| || ||| ||   |||||||  ||||  | ||||| |||||||  | || |||||||||||||||||||||||    
T  42976 ggtgagggacacaaatttcagtttttgttctgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatcaaa 42896  T

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Target: scaffold0729 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 4704 - 4591
Alignment:
Q  11 attgaataattttttgtcttatacgatttttgtg-gacaaa-tgttattttggtattt-agataacttatacgtagaataaaaagttgtgttgtggtttg 107  Q
    ||||| ||||||||||| |||||||||||||  | |||||| || ||||||| | ||| ||| ||||| ||||| | | |||||||||||||||||||||    
T  4704 attgagtaattttttgttttatacgattttttagagacaaaatgatattttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttg 4605  T
Q  108 gtgaggggcaaaaa 121  Q
    ||||||| ||||||    
T  4604 gtgagggacaaaaa 4591  T

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Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 33678 - 33538
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttg-tggacaaatg-ttattttggta-tttagataacttatacgtagaataaaaagttgtgt 98  Q
    |||||| |||||||||||||||| ||||||||| | ||||| |||||||| |  |||||||||| |||| | || || ||||| | | ||||||||||||    
T  33678 ttttatgatattgaataatttttggtcttatacaagttttgatggacaaaagcctattttggtattttatacaatttgtacgtgggacaaaaagttgtgt 33579  T
Q  99 tgtggtttggtgaggggcaaaaaattttatttttgtcgtgtc 140  Q
    ||||||||| |||||| | || ||||| ||||||||| ||||    
T  33578 tgtggtttgatgagggac-aagaatttcatttttgtcatgtc 33538  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 15222 - 15322
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||||||||||||||||||||||| ||| ||||||  |   |||||||| ||||  | ||||| |||||||| | |  ||||||||||||||||||||||    
T  15222 aaaaagttgtgttgtggtttggtgggggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaa 15321  T
Q  187 a 187  Q
    |    
T  15322 a 15322  T

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Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51400 - 51522
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttg-tggac-aaatgttattttggta-tttagataacttatacgtagaataaaaagttgtg 97  Q
    ||||||| | ||||| ||||||||||| ||||||||||||||  |||| ||||| ||||||| || |||||| ||||| ||||| | | |||||||||||    
T  51400 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 51499  T
Q  98 ttgtggtttggtgaggggcaaaaa 121  Q
     |||||||| ||||||| ||||||    
T  51500 ctgtggttt-gtgagggacaaaaa 51522  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 111206 - 111136
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgattttt-gtggacaaatgttattttggta-tttagataa 72  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||| ||  |||||||||||| |||||||||    
T  111206 ttttatgatattgaataattttatgtcttatacgatttttggtggataa--gttattttggtactttagataa 111136  T

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Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 108436 - 108396
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttg 42  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  108436 ttttatgatattgaataattttatgtcttatacgatttttg 108396  T

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Target: scaffold0280 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13822 - 13599
Alignment:
Q  1 tttttataatattgaataattttttgtcttatacgatttttgtgg-aca-aatgttattttggtattt-agataacttatacgtagaataaaaagttgtg 97  Q
    |||||||  ||||||||||||| |||| ||||| | |||||| || ||  |||| ||||||||| ||| ||| ||||| || || | | ||||||||||     
T  13822 tttttatggtattgaataatttcttgttttatatgctttttgggggacggaatgctattttggtgttttagacaacttgtaagtgggacaaaaagttgta 13723  T
Q  98 ttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaaatactaaacaa 197  Q
     |||||||||||||||| |||||| ||   |||||||| | ||  | ||||| |||||||  | || |||||||| |||||||||||||| |||  ||||    
T  13722 ctgtggtttggtgagggacaaaaatttcagtttttgtcctatcccttgcctccagtttgttctgtccctgaaacaattttacaaatcaaacactggacaa 13623  T
Q  198 cttaagttatcatgtcctgtcctt 221  Q
    ||  |||| |  ||||||||||||    
T  13622 ctggagttgttctgtcctgtcctt 13599  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 3762 - 3722
Alignment:
Q  2 ttttataatattgaataattttttgtcttatacgatttttg 42  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  3762 ttttatgatattgaataattttttatcttatatgatttttg 3722  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 19202 - 19102
Alignment:
Q  87 aaaaagttgtgttgtggtttggtgaggggcaaaaaattttatttttgtcgtgtctatggcctcgagtttgtcttatctctgaaacagttttacaaatcaa 186  Q
    |||||||||||||| | |||| |||||| |||||| ||   |||||||| |||| || |||||  |||| |  | || ||||||||||||||||||||||    
T  19202 aaaaagttgtgttgagctttgatgagggacaaaaatttcagtttttgtcctgtccattgcctcctgtttattctgtccctgaaacagttttacaaatcaa 19103  T
Q  187 a 187  Q
    |    
T  19102 a 19102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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