View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6132_high_25 (Length: 286)
Name: NF6132_high_25
Description: NF6132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6132_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 2351653 - 2351443
Alignment:
| Q |
19 |
taaagtactcacatatcttaataaattctcttccaaacatatcgatcataagtttaaaaccattaccacatgtgttaagagttaatttcctatcaatcgc |
118 |
Q |
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|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2351653 |
taaagtacccacatatcttaataaattctcttctaaacatatcgatcataagtttaaaaccattaccacatgtgttaagagttaatttcctatcaatcgc |
2351554 |
T |
|
| Q |
119 |
cccacactatattgtcacttttcataattaacaactacccaaccatcaacaagaatttaaatattaataagagaaaacacaaagattatagatacaaatt |
218 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2351553 |
tccacactatattgttacttttcataattaacaactacccaaccatcaacaagaatttaaatattaataagagaaaacacaaagattatagatacaaatt |
2351454 |
T |
|
| Q |
219 |
aaaatactata |
229 |
Q |
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||||||||||| |
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| T |
2351453 |
aaaatactata |
2351443 |
T |
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