View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6132_low_10 (Length: 423)
Name: NF6132_low_10
Description: NF6132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6132_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 416
Target Start/End: Original strand, 1055977 - 1056392
Alignment:
| Q |
1 |
aaaccgaggagcttcaaatcggttttaactaaagttcgttaattgtttgagttcaaccacttggttaaactatttactacgcacacatttagttaatatt |
100 |
Q |
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| T |
1055977 |
aaaccgaggagcttcaaatcagttttaactaaagtttgttaattgtttgagttcaaccacttggttaaactatttactacgcacacattaagttaatttt |
1056076 |
T |
|
| Q |
101 |
ttttaacaaaattgaataaagatataaagaaaattggatgataaataaatacaagccttactaaacaaactacatattacccatgtgagacaccacatca |
200 |
Q |
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| T |
1056077 |
ttataacaaaattgaataaagatataaagaaaattggatgataaataaatacaagccttactaaacaaactacatattacccatgtgagacaccacatca |
1056176 |
T |
|
| Q |
201 |
tagacccctaaaaagcatatcaactcctaagacaaagaaatgccaaatcttaggacataaggcatgccatgatttttatctaattctcactagagcacct |
300 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
1056177 |
tagacccctaaaaagcatatcaactcctaagagaaagaaatgccaaatcttaggacataaggcatgccatgattttcatctaattctcactagagcacct |
1056276 |
T |
|
| Q |
301 |
aattggcctagacatgagtctgcataacttgttattcgatagttcatatctttgcaaagaaatgtttgatgcatctccacatatcttttctttaggcatt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1056277 |
aattggcctagacatgagtctgcataacttgttattcgatagttcatatctttgcaaagaaatgtttgatgcatctccacatatcttttctttaggcatt |
1056376 |
T |
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| Q |
401 |
ccaatatcctttgcta |
416 |
Q |
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|||||||||||||||| |
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| T |
1056377 |
ccaatatcctttgcta |
1056392 |
T |
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