View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6132_low_17 (Length: 330)

Name: NF6132_low_17
Description: NF6132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6132_low_17
NF6132_low_17
[»] chr6 (2 HSPs)
chr6 (1-313)||(10795975-10796295)
chr6 (1-115)||(10791737-10791851)
[»] chr4 (6 HSPs)
chr4 (1-115)||(50077284-50077398)
chr4 (134-281)||(49106714-49106860)
chr4 (1-114)||(49106614-49106728)
chr4 (1-114)||(49108718-49108832)
chr4 (7-112)||(49533715-49533821)
chr4 (1-56)||(11652477-11652532)
[»] chr1 (11 HSPs)
chr1 (1-114)||(38175615-38175729)
chr1 (1-57)||(14669794-14669850)
chr1 (1-57)||(14706054-14706110)
chr1 (1-57)||(14716257-14716313)
chr1 (1-32)||(14654425-14654456)
chr1 (1-32)||(14664216-14664247)
chr1 (1-32)||(14708569-14708600)
chr1 (1-32)||(28366284-28366315)
chr1 (1-32)||(33988061-33988092)
chr1 (1-30)||(14676625-14676654)
chr1 (1-30)||(14683743-14683772)
[»] chr5 (2 HSPs)
chr5 (1-114)||(7524877-7524990)
chr5 (1-56)||(1716537-1716592)
[»] chr8 (5 HSPs)
chr8 (1-56)||(41841237-41841292)
chr8 (1-109)||(40054225-40054334)
chr8 (1-30)||(42872535-42872564)
chr8 (1-29)||(44878977-44879005)
chr8 (1-29)||(44880916-44880944)
[»] chr2 (9 HSPs)
chr2 (1-98)||(43849973-43850071)
chr2 (1-55)||(8973280-8973334)
chr2 (1-55)||(8979290-8979344)
chr2 (1-57)||(30731974-30732030)
chr2 (1-32)||(9026777-9026808)
chr2 (1-32)||(9032044-9032075)
chr2 (1-55)||(8984661-8984715)
chr2 (1-31)||(9023439-9023469)
chr2 (1-29)||(32918074-32918102)


Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 10795975 - 10796295
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtcactcagtttctttcttcattacccgatgtgggactta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795975 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgcttttatatcaactgtcactcagtttctttcttcattacccgatgtgggactta 10796074  T
Q  101 tatgcagtaccacccnnnnnnnnngtg--gatggaatatgcagtagcaccttgtgaccgactcttacaccccactcccgtgcgtgactcgccacttattt 198  Q
    |||||||||||||||          ||  || ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  10796075 tatgcagtaccaccccttttttttttgttgagggaatatgcagtagcaccttgtgactgactcttacacaccactcccgtgcgtgactcaccacttattt 10796174  T
Q  199 tctgctgcaaactttcattatcagttttaaatgtgacgatagattgttgaatacaacaattgaaacaatgcctccagt------atcaaaatcacatctc 292  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||      ||||||||||||||||    
T  10796175 tctgctgcaaattttcattatcagttttaaatgtgacgagagattgttgaatacaacaattgaaacaatgcatccagtatcaaaatcaaaatcacatctc 10796274  T
Q  293 aaattaaaatagtatgcaatt 313  Q
    ||||||||||||| |||||||    
T  10796275 aaattaaaatagtctgcaatt 10796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10791737 - 10791851
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtcactcagtttctttcttcattacccgatgtgggactta 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  10791737 ccaaaaggccgagaaaggtatgagttgaaagaagagttggcttctgcttttatatcaactgtcacttagtttctttcttcattacccgatatgggactta 10791836  T
Q  101 tatgcagtaccaccc 115  Q
    |||||||||||||||    
T  10791837 tatgcagtaccaccc 10791851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 50077284 - 50077398
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtcactcagtttctttcttcattacccgatgtgggactta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  50077284 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgcttttatatcaactgtcacttagtttctttcttcattacccgatatgggactta 50077383  T
Q  101 tatgcagtaccaccc 115  Q
    |||||||||||||||    
T  50077384 tatgcagtaccaccc 50077398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 49106714 - 49106860
Alignment:
Q  134 atatgcagtagcaccttgtgaccgactcttacaccccactcccgtgcgtgactcgccacttattttctgctgcaaactttcattatcagttttaaatgtg 233  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| | | |||||||||    
T  49106714 atatgcagtaccaccttgtgactgactcttacacaccactcccgtgcgtgactcaacacttattttctgctgcaaactttcattataaatattaaatgtg 49106813  T
Q  234 acgatagattgttgaatacaacaattgaaacaatgcctccagtatcaa 281  Q
    | || ||||||||||||||||| ||||||||||| |||||||||||||    
T  49106814 atgagagattgttgaatacaac-attgaaacaattcctccagtatcaa 49106860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 49106614 - 49106728
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtc-actcagtttctttcttcattacccgatgtgggactt 99  Q
    |||||||||||||||||||||||||||||||    ||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  49106614 ccaaaaggccgagaaaggtatgagttgaaagggtggctggcttctgcttttatatcaactgtctaatcagttcctttcttcattacccgatgtgggactt 49106713  T
Q  100 atatgcagtaccacc 114  Q
    |||||||||||||||    
T  49106714 atatgcagtaccacc 49106728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 49108718 - 49108832
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtc-actcagtttctttcttcattacccgatgtgggactt 99  Q
    |||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||| | |||||| ||||| | |||||||||||||||||||    
T  49108718 ccaaaaggccgagaaaggtatgagttgaaatataggctggcttctgattttatatcaactgtctattcagttcctttccttattacccgatgtgggactt 49108817  T
Q  100 atatgcagtaccacc 114  Q
    |||||||||||||||    
T  49108818 atatgcagtaccacc 49108832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 49533715 - 49533821
Alignment:
Q  7 ggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtc-actcagtttctttcttcattacccgatgtgggacttatatgc 105  Q
    |||||||||||||||| |||| || ||| ||||||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||| |||||    
T  49533715 ggccgagaaaggtatgggttggaataagggctggcttctggttttatatcaactgtctaatcagtttctttcttcattagccgatgtgggacttttatgc 49533814  T
Q  106 agtacca 112  Q
    |||||||    
T  49533815 agtacca 49533821  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11652477 - 11652532
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatc 56  Q
    |||||||||||||||||||||||||| ||||| | | ||||||||| |||||||||    
T  11652477 ccaaaaggccgagaaaggtatgagttaaaagatgggttggcttctggttttatatc 11652532  T

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Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38175615 - 38175729
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaa-gaagagctggcttctgattttatatcaactgtc-actcagtttctttcttcattacccgatgtgggact 98  Q
    |||||||||||||||||||||||||||||| ||||  || || |||| |||||||| ||||||  ||| |||||||||||||||||||||||||||||||    
T  38175615 ccaaaaggccgagaaaggtatgagttgaaatgaagc-ctcgcatctgcttttatatgaactgtatacttagtttctttcttcattacccgatgtgggact 38175713  T
Q  99 tatatgcagtaccacc 114  Q
    ||||||||||||||||    
T  38175714 tatatgcagtaccacc 38175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14669794 - 14669850
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatca 57  Q
    |||||||||||||||||||||||||||||||| | ||| | | ||| ||||||||||    
T  14669794 ccaaaaggccgagaaaggtatgagttgaaagatgggctcgttgctgcttttatatca 14669850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14706110 - 14706054
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatca 57  Q
    |||||||||||||||||||||||||||||||| | ||| | | ||| ||||||||||    
T  14706110 ccaaaaggccgagaaaggtatgagttgaaagatgggctcggtgctgcttttatatca 14706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14716313 - 14716257
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatca 57  Q
    |||||||||||||||||||||||||||||||| || || | | ||| ||||||||||    
T  14716313 ccaaaaggccgagaaaggtatgagttgaaagatgaactcggtgctgcttttatatca 14716257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 14654425 - 14654456
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  14654425 ccaaaaggccgagaaaggtatgagttgaaaga 14654456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 14664216 - 14664247
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  14664216 ccaaaaggccgagaaaggtatgagttgaaaga 14664247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 14708600 - 14708569
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  14708600 ccaaaaggccgagaaaggtatgagttgaaaga 14708569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28366284 - 28366315
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  28366284 ccaaaaggccgagaaaggtatgagttgaaaga 28366315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33988092 - 33988061
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  33988092 ccaaaaggccgagaaaggtatgagttgaaaga 33988061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14676654 - 14676625
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  14676654 ccaaaaggccgagaaaggtatgagttgaaa 14676625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14683772 - 14683743
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  14683772 ccaaaaggccgagaaaggtatgagttgaaa 14683743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7524990 - 7524877
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtc-actcagtttctttcttcattacccgatgtgggactt 99  Q
    ||||||||||||||||||||||| |||||| || | || || | || ||||||||| |||||| ||||||||  ||||||||||||||||||||||||||    
T  7524990 ccaaaaggccgagaaaggtatgacttgaaacaacaccttgcat-tgcttttatatccactgtctactcagttcttttcttcattacccgatgtgggactt 7524892  T
Q  100 atatgcagtaccacc 114  Q
     ||||||| ||||||    
T  7524891 ttatgcagcaccacc 7524877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1716537 - 1716592
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatc 56  Q
    |||||||||||||||||||||||||| ||||| |  || |||||| ||||||||||    
T  1716537 ccaaaaggccgagaaaggtatgagttaaaagatgcactcgcttcttattttatatc 1716592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41841237 - 41841292
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatc 56  Q
    |||||||||||||||||||||||||||||||| | | ||||||||| |||||||||    
T  41841237 ccaaaaggccgagaaaggtatgagttgaaagatgggttggcttctgcttttatatc 41841292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40054334 - 40054225
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatcaactgtc-actcagtttctttcttcattacccgatgtgggactt 99  Q
    ||||||||||||||||||||||| || |||  ||  || || |||  ||||||||| | |||| |||||||| ||||||||||||  |||||||||||||    
T  40054334 ccaaaaggccgagaaaggtatgaattaaaatgaggcctcgcatcttcttttatatccagtgtctactcagttcctttcttcattattcgatgtgggactt 40054235  T
Q  100 atatgcagta 109  Q
     |||||||||    
T  40054234 ttatgcagta 40054225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 42872535 - 42872564
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  42872535 ccaaaaggccgagaaaggtatgagttgaaa 42872564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 44879005 - 44878977
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaa 29  Q
    |||||||||||||||||||||||||||||    
T  44879005 ccaaaaggccgagaaaggtatgagttgaa 44878977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 44880916 - 44880944
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaa 29  Q
    |||||||||||||||||||||||||||||    
T  44880916 ccaaaaggccgagaaaggtatgagttgaa 44880944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 43850071 - 43849973
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagct-ggcttctgattttatatcaactgtc-actcagtttctttcttcattacccgatgtgggact 98  Q
    |||||||||||||||||||||||||||||| ||| |||  || |||| |||||||||  ||||| |||||| | ||||||| ||||||||||||||||||    
T  43850071 ccaaaaggccgagaaaggtatgagttgaaataag-gctacgcatctgcttttatatcctctgtctactcagatcctttcttgattacccgatgtgggact 43849973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8973334 - 8973280
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatat 55  Q
    |||||||||||||||||||||||||||||||| || || |||| || ||||||||    
T  8973334 ccaaaaggccgagaaaggtatgagttgaaagatgaactcgcttatgcttttatat 8973280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8979344 - 8979290
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatat 55  Q
    |||||||||||||||||||||||||||||||| || || |||| || ||||||||    
T  8979344 ccaaaaggccgagaaaggtatgagttgaaagatgaacttgcttatgcttttatat 8979290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30732030 - 30731974
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatatca 57  Q
    |||||||||||||||||||||||||||||||| | ||| | | ||| ||||||||||    
T  30732030 ccaaaaggccgagaaaggtatgagttgaaagatgggctcgttgctgcttttatatca 30731974  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9026808 - 9026777
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  9026808 ccaaaaggccgagaaaggtatgagttgaaaga 9026777  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9032075 - 9032044
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  9032075 ccaaaaggccgagaaaggtatgagttgaaaga 9032044  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8984715 - 8984661
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaagaagagctggcttctgattttatat 55  Q
    |||||||||||||||||||||||||||||| | || || |||| || ||||||||    
T  8984715 ccaaaaggccgagaaaggtatgagttgaaatatgaacttgcttatgcttttatat 8984661  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 9023469 - 9023439
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaaag 31  Q
    |||||||||||||||||||||||||||||||    
T  9023469 ccaaaaggccgagaaaggtatgagttgaaag 9023439  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 32918102 - 32918074
Alignment:
Q  1 ccaaaaggccgagaaaggtatgagttgaa 29  Q
    |||||||||||||||||||||||||||||    
T  32918102 ccaaaaggccgagaaaggtatgagttgaa 32918074  T

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