View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6132_low_34 (Length: 246)

Name: NF6132_low_34
Description: NF6132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6132_low_34
NF6132_low_34
[»] chr1 (6 HSPs)
chr1 (3-74)||(29359857-29359928)
chr1 (6-70)||(49020295-49020359)
chr1 (22-74)||(49570110-49570162)
chr1 (4-70)||(30745104-30745170)
chr1 (4-70)||(30766555-30766621)
chr1 (46-74)||(8454609-8454637)
[»] chr8 (6 HSPs)
chr8 (3-74)||(41639684-41639755)
chr8 (4-74)||(35067274-35067344)
chr8 (1-70)||(39453201-39453270)
chr8 (5-74)||(6440195-6440264)
chr8 (5-74)||(5574369-5574438)
chr8 (43-71)||(13971033-13971061)
[»] chr2 (5 HSPs)
chr2 (2-84)||(7084600-7084682)
chr2 (1-74)||(43658596-43658669)
chr2 (43-76)||(36774650-36774683)
chr2 (44-74)||(18737801-18737831)
chr2 (43-84)||(33616571-33616612)
[»] chr4 (4 HSPs)
chr4 (1-70)||(16019594-16019663)
chr4 (4-81)||(47015112-47015189)
chr4 (1-70)||(34757793-34757862)
chr4 (1-70)||(34759067-34759136)
[»] chr3 (7 HSPs)
chr3 (1-74)||(36755935-36756008)
chr3 (5-74)||(43720492-43720561)
chr3 (3-74)||(1436930-1437001)
chr3 (3-74)||(51698972-51699043)
chr3 (3-74)||(33796380-33796451)
chr3 (43-74)||(19150246-19150277)
chr3 (43-84)||(48353100-48353141)
[»] chr7 (3 HSPs)
chr7 (7-70)||(35822865-35822928)
chr7 (43-84)||(47954028-47954069)
chr7 (44-84)||(47012497-47012537)
[»] chr5 (7 HSPs)
chr5 (3-74)||(16690613-16690684)
chr5 (19-74)||(26686992-26687047)
chr5 (19-74)||(26956723-26956778)
chr5 (202-244)||(26686824-26686866)
chr5 (202-244)||(26956555-26956597)
chr5 (12-73)||(34940748-34940809)
chr5 (4-74)||(38493739-38493809)
[»] scaffold0662 (1 HSPs)
scaffold0662 (4-81)||(1251-1328)


Alignment Details
Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 29359928 - 29359857
Alignment:
Q  3 agagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||| |||||| ||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  29359928 agagcaatgttatttgaacatcaatttgattgacaaccacattgacaaccatatttttataaagaaaagtat 29359857  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 49020295 - 49020359
Alignment:
Q  6 gcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    ||||| |||||| ||||| |||||| |||| |||||  |||||||||||||||||| ||||||||    
T  49020295 gcaattttatttgaacatcaatttggttgacaaccaaattgacaaccatatttttacaaagaaaa 49020359  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 49570162 - 49570110
Alignment:
Q  22 attaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||| |||| |||| || ||| |||||||||||||||||||||||||||||||    
T  49570162 attattttggttgacaatcacattgacaaccatatttttataaagaaaagtat 49570110  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 30745170 - 30745104
Alignment:
Q  4 gagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    ||||||| |||||| ||||||||||||||||| |||||  | |||||||||| | ||| ||||||||    
T  30745170 gagcaatgttatttgaacattaatttgattgacaaccatatagacaaccatactcttacaaagaaaa 30745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 30766621 - 30766555
Alignment:
Q  4 gagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    ||||||| |||||| ||||||||||||||||| |||||  | |||||||||| | ||| ||||||||    
T  30766621 gagcaatgttatttgaacattaatttgattgacaaccatatagacaaccatactcttacaaagaaaa 30766555  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 74
Target Start/End: Original strand, 8454609 - 8454637
Alignment:
Q  46 gacaaccatatttttataaagaaaagtat 74  Q
    |||||||||||||||||||||||||||||    
T  8454609 gacaaccatatttttataaagaaaagtat 8454637  T

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Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 41639684 - 41639755
Alignment:
Q  3 agagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||| |||||| ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  41639684 agagcaatgttatttgaacatcaatttggttgacaaccacgttgacaaccatatttttacaaagaaaagtat 41639755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 35067344 - 35067274
Alignment:
Q  4 gagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    ||||||| |||||| ||||| |||||| |||| |||||| |||||||||||||||||| ||||||||||||    
T  35067344 gagcaatgttatttgaacatcaatttggttgacaaccacattgacaaccatatttttacaaagaaaagtat 35067274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39453201 - 39453270
Alignment:
Q  1 aaagagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    |||||||||| |||||| ||||| ||||||||||| |||||| ||||||| |||||||||| ||||||||    
T  39453201 aaagagcaatgttatttgaacatcaatttgattgacaaccacattgacaatcatatttttacaaagaaaa 39453270  T

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Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 6440264 - 6440195
Alignment:
Q  5 agcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||| |||||| ||||| || ||| |||| |||||  |||||||||||||||||| ||||||||||||    
T  6440264 agcaatgttatttgaacatcaacttggttgacaaccaaattgacaaccatatttttacaaagaaaagtat 6440195  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 5574438 - 5574369
Alignment:
Q  5 agcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||| |||||| ||||| |||||| |||| ||| |  |||||| ||||||||||| ||||||||||||    
T  5574438 agcaatgttatttgaacatcaatttggttgacaactatattgacacccatatttttacaaagaaaagtat 5574369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 13971061 - 13971033
Alignment:
Q  43 gttgacaaccatatttttataaagaaaag 71  Q
    |||||||||||||||||||||||||||||    
T  13971061 gttgacaaccatatttttataaagaaaag 13971033  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 7084600 - 7084682
Alignment:
Q  2 aagagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtatcttttggtac 84  Q
    ||||||||| |||||| ||||| |||||| |||| |||||| ||||||| |||||||||| |||||||||||| | |||||||    
T  7084600 aagagcaatgttatttgaacatcaatttggttgacaaccacattgacaatcatatttttacaaagaaaagtatgtgttggtac 7084682  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43658596 - 43658669
Alignment:
Q  1 aaagagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||||| |||||| |||||||||||| |||| |||||  |||||||| || |||||| ||||||||||||    
T  43658596 aaagagcaatgttatttgaacattaatttggttgacaaccatattgacaactatttttttacaaagaaaagtat 43658669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 36774683 - 36774650
Alignment:
Q  43 gttgacaaccatatttttataaagaaaagtatct 76  Q
    ||||||||||||||||||||||||||||||||||    
T  36774683 gttgacaaccatatttttataaagaaaagtatct 36774650  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 74
Target Start/End: Original strand, 18737801 - 18737831
Alignment:
Q  44 ttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||||||||||||||||||||||||||    
T  18737801 ttgacaaccatatttttataaagaaaagtat 18737831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 33616612 - 33616571
Alignment:
Q  43 gttgacaaccatatttttataaagaaaagtatcttttggtac 84  Q
    ||||||||||||||||||| |||||||||||| | |||||||    
T  33616612 gttgacaaccatatttttacaaagaaaagtatgtgttggtac 33616571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16019663 - 16019594
Alignment:
Q  1 aaagagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    |||||||||| |||||| ||||| ||||||||||| || ||  |||||||||||||||||||||||||||    
T  16019663 aaagagcaatgttatttgaacatcaatttgattgacaagcatattgacaaccatatttttataaagaaaa 16019594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 47015189 - 47015112
Alignment:
Q  4 gagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtatcttttgg 81  Q
    ||||||| |||||| ||||| | |||| |||| |||||| ||||||| |||||||||| |||||||||||||| ||||    
T  47015189 gagcaatgttatttgaacatcagtttggttgacaaccacattgacaatcatatttttacaaagaaaagtatctattgg 47015112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34757793 - 34757862
Alignment:
Q  1 aaagagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    |||||||||| |||||| || || ||||||||||| || |||  |||||| |||||||||| ||||||||    
T  34757793 aaagagcaatgttatttaaatatcaatttgattgacaatcacactgacaatcatatttttacaaagaaaa 34757862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34759067 - 34759136
Alignment:
Q  1 aaagagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    |||||||||| |||||| || || ||||||||||| || |||  |||||| |||||||||| ||||||||    
T  34759067 aaagagcaatgttatttaaatatcaatttgattgacaatcacactgacaatcatatttttacaaagaaaa 34759136  T

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Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36755935 - 36756008
Alignment:
Q  1 aaagagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||||| |||||| || || ||||||||||| || ||| |||||||||||||||||| ||||||||||||    
T  36755935 aaagagcaatgttatttgaatatcaatttgattgacaatcacattgacaaccatatttttacaaagaaaagtat 36756008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 43720561 - 43720492
Alignment:
Q  5 agcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||| || ||| |||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||    
T  43720561 agcaatgttctttgaacattaatttggttgacaaccacattgacaatcatatttttataaagaaaagtat 43720492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 1437001 - 1436930
Alignment:
Q  3 agagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||| |||||| ||||| |||||| || | |||||| |||||||||||||||||| ||||||||||||    
T  1437001 agagcaatgttatttgaacatcaatttggtttacaaccacattgacaaccatatttttacaaagaaaagtat 1436930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 51699043 - 51698972
Alignment:
Q  3 agagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||| |||||| ||||| |||||| |||| |||||| |||||||||||||| ||| ||||||||||||    
T  51699043 agagcaatgttatttgaacatcaatttggttgacaaccacattgacaaccatattcttacaaagaaaagtat 51698972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 33796451 - 33796380
Alignment:
Q  3 agagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||| ||| |||||| || || |||||| |||| || ||| |||||||||||||||||||||||||||||||    
T  33796451 agagtaatgttatttgaaaatcaatttggttgacaatcacattgacaaccatatttttataaagaaaagtat 33796380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 74
Target Start/End: Original strand, 19150246 - 19150277
Alignment:
Q  43 gttgacaaccatatttttataaagaaaagtat 74  Q
    ||||||||||||||||||||||||||||||||    
T  19150246 gttgacaaccatatttttataaagaaaagtat 19150277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 48353141 - 48353100
Alignment:
Q  43 gttgacaaccatatttttataaagaaaagtatcttttggtac 84  Q
    |||||||| ||||||||||||||||||||||| | |||||||    
T  48353141 gttgacaatcatatttttataaagaaaagtatgtgttggtac 48353100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 35822865 - 35822928
Alignment:
Q  7 caatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaa 70  Q
    |||| |||||| ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||    
T  35822865 caatgttatttgaacatcaatttggttgacaaccacgttgacaaccatatttttacaaagaaaa 35822928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 47954028 - 47954069
Alignment:
Q  43 gttgacaaccatatttttataaagaaaagtatcttttggtac 84  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  47954028 gttgacaaccatatttttataaagaaaagtatgtgttggtac 47954069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 47012497 - 47012537
Alignment:
Q  44 ttgacaaccatatttttataaagaaaagtatcttttggtac 84  Q
    |||||||||||||||||| |||||||||||| | |||||||    
T  47012497 ttgacaaccatatttttacaaagaaaagtatatgttggtac 47012537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 16690684 - 16690613
Alignment:
Q  3 agagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    |||||||| |||||| || || |||||| |||| |||||| |||||||||||||||||| ||||||||||||    
T  16690684 agagcaatgttatttgaatatcaatttggttgacaaccacattgacaaccatatttttacaaagaaaagtat 16690613  T

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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 26687047 - 26686992
Alignment:
Q  19 aacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    ||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||    
T  26687047 aacattaatttgattgacaactacattgacaaccatatttttacaaagaaaagtat 26686992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 26956778 - 26956723
Alignment:
Q  19 aacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    ||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||    
T  26956778 aacattaatttgattgacaactacattgacaaccatatttttacaaagaaaagtat 26956723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 26686866 - 26686824
Alignment:
Q  202 ctcactacagtttaaaattatatctctccagttttcatatcac 244  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  26686866 ctcactacagtttaaaattatatctctccagttttcatgtcac 26686824  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 26956597 - 26956555
Alignment:
Q  202 ctcactacagtttaaaattatatctctccagttttcatatcac 244  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  26956597 ctcactacagtttaaaattatatctctccagttttcatgtcac 26956555  T

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Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 34940809 - 34940748
Alignment:
Q  12 ttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagta 73  Q
    |||||| ||||| |||||| |||| |||||| ||||||| ||||||||||||||||||||||    
T  34940809 ttatttgaacatcaatttggttgacaaccacattgacaatcatatttttataaagaaaagta 34940748  T

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Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 38493809 - 38493739
Alignment:
Q  4 gagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtat 74  Q
    ||||||| |||||| ||||| |||||| |||| |||||| |||||| ||||||||| | ||||||||||||    
T  38493809 gagcaatgttatttgaacatcaatttggttgacaaccacattgacacccatattttaacaaagaaaagtat 38493739  T

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Target: scaffold0662 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 1328 - 1251
Alignment:
Q  4 gagcaatcttatttcaacattaatttgattgataaccacgttgacaaccatatttttataaagaaaagtatcttttgg 81  Q
    ||||||| |||||| ||||| | |||| |||| |||||| ||||||| |||||||||| |||||||||||||| ||||    
T  1328 gagcaatgttatttgaacatcagtttggttgacaaccacattgacaatcatatttttacaaagaaaagtatctattgg 1251  T

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