View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6134_low_11 (Length: 248)
Name: NF6134_low_11
Description: NF6134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6134_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 24876096 - 24875864
Alignment:
| Q |
1 |
taggatcatgtgacactaagattttcattgatattcgtaaaatactcaatttataaattaaattaatgcaaaatcatttagtacttgctttaactagtaa |
100 |
Q |
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| T |
24876096 |
taggatcatgtgacactaagattttcattgatattcgtaaaatactcaatttataaattaaattaatgcaaaatcatttagtacttgctttaactagtaa |
24875997 |
T |
|
| Q |
101 |
tcctaaaactcctcaccatttccccgtaatacacaacctgtaatacaaaaatatgcaagcatgcattttgttgatgagagagtgttcacgttaatcagtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
24875996 |
tcctaaaactcctcaccatttccccgtaatacacaacctgtaatacaaaaatatgcaagcatgcattttgttgatgggagagtgttcacgttaatcagtc |
24875897 |
T |
|
| Q |
201 |
tagcgtcatagactaactataatcagacatgat |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
24875896 |
tagcgtcatagactaactataatcagacatgat |
24875864 |
T |
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