View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6134_low_2 (Length: 668)
Name: NF6134_low_2
Description: NF6134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6134_low_2 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 621; Significance: 0; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 621; E-Value: 0
Query Start/End: Original strand, 18 - 650
Target Start/End: Original strand, 26354544 - 26355176
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26354544 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
26354643 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26354644 |
aattttcaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaattttttgaacctctcccacacc |
26354743 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaa |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26354744 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaa |
26354843 |
T |
|
| Q |
318 |
acacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaactttt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26354844 |
acacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaactttt |
26354943 |
T |
|
| Q |
418 |
caccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatc |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26354944 |
caccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcatgttcaacttcactacctttatccatgaaaacatccatc |
26355043 |
T |
|
| Q |
518 |
cataatgatattcttggcttacctgttttagtctttttaagttcctttcttgcattgatcatcttcttttccaccactctcatttctcggtctttaacat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26355044 |
cataatgatattcttggcttacctgttttagtctttttaagttcctttcttgcattgatcatcttcttttccaccactctcatttctcggtctttaacat |
26355143 |
T |
|
| Q |
618 |
tcgcgaaaataggatcaccaatgacagggtaac |
650 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
26355144 |
tcgcgaaaataggatcaccaatgacagggtaac |
26355176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 18 - 520
Target Start/End: Complemental strand, 9815535 - 9815036
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||| ||||| || | ||| |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| |
|
|
| T |
9815535 |
catcatttggataaaacacaccgcagttatcagcatatctaaaatatggacgccaaagaaaatcatccatagccgagtctaatgccagcttaacattgtc |
9815436 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
||||| |||||| || ||| |||| || |||||||||||||||||||| | |||||||||||||||| || ||||| |||| |||||||||||||||| |
|
|
| T |
9815435 |
aattttcaaggcctgaaccttatgtcacctaaacaataaagggtctccgtgattgatcaacatgggttctggctgtaaattttggaacctctcccacacc |
9815336 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaa |
317 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
9815335 |
caaatttgaaccaagtaaaagggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaattaactattgttttcttaa |
9815236 |
T |
|
| Q |
318 |
acacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaactttt |
417 |
Q |
| |
|
||| |||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9815235 |
acaaacttaaatcgttataaatactagctaaaacagctggtgccaaagcaatagaatttcctctagcaagatgaatagcaatagaaaacaaagaactttt |
9815136 |
T |
|
| Q |
418 |
caccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatc |
517 |
Q |
| |
|
|||||| |||| || |||||||| ||||| ||||| | | ||||||| ||||| || |||| |||||||||||| || ||||||| ||||||| |
|
|
| T |
9815135 |
caccaa---agatttatgagttaaaacaaagattgacaaccacgtagcaatgaacgcttcatgctcaatttcactacctttgtcgatgaaaaaatccatc |
9815039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 650
Target Start/End: Complemental strand, 9814981 - 9814906
Alignment:
| Q |
575 |
atcatcttcttttccaccactctcatttctcggtctttaacattcgcgaaaataggatcaccaatgacagggtaac |
650 |
Q |
| |
|
|||| ||||| ||||||| |||||||||| ||| ||||||||| ||||||||||||||| |||||||| |||| |
|
|
| T |
9814981 |
atcaacttctcttccacctctctcatttcccggcctttaacatctatgaaaataggatcaccgatgacaggataac |
9814906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 225; Significance: 1e-123; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 18 - 501
Target Start/End: Original strand, 20015818 - 20016301
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||| | | |||| | ||| |||||||| ||||||||||||||||||||||||| ||||| |||||||| ||| | |||||||||| |
|
|
| T |
20015818 |
catcatttggataaaacaaatcacacttatcagcatatctgaaatatggacgccaaagaaaatcatcaatagctgagtctaatgccaccataacattgtc |
20015917 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
||||| ||| || || ||| ||||||| |||||||||||||||||| || | ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
20015918 |
aattttcaaagcctgaaccttatgccacctaaacaataaagggtcttcatgattgatcaacatgggttgtggttgtaaaattttgaacctctcccacacc |
20016017 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaaca-gataattttgacaaatcaacaatggttttctta |
316 |
Q |
| |
|
|||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||| ||||||||| |
|
|
| T |
20016018 |
caaatttgaaccaaataaatgggtgattgaagtgtaacttctaaaggatacctatcaccacccacatgat-attttgacaaatcaacaattgttttctta |
20016116 |
T |
|
| Q |
317 |
aacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttt |
416 |
Q |
| |
|
|||| |||||||| |||||||||||||| || ||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
20016117 |
aacaaacttaaatctttatatatgctagccaagacagctggtgccaaagcaataggatttcgtctagcaagatgaatagcaatcggaaacaaacaacttt |
20016216 |
T |
|
| Q |
417 |
tcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatc |
501 |
Q |
| |
|
|||| | | |||| ||| |||||||||||||| | ||||| | ||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
20016217 |
tcacggaagagtatttatgagggaaaacaaaaattgacagccaagtagcaagaaatgcttcatgttcaatttcactacctttatc |
20016301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 52 - 519
Target Start/End: Original strand, 20036254 - 20036721
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
||||| || |||||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||| ||||| | ||| ||||||| |||||| |
|
|
| T |
20036254 |
atatcgaacatatggacgccaaagaaagtcatccatagccgagtctaatgccatcctaacattgtcaatcatcaagggcttaaccttatgccacctaaac |
20036353 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagag |
251 |
Q |
| |
|
|| |||||||| ||| |||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
20036354 |
aaaaaagggtccccatggttcaacaacatgggttgtggttgtaaatttttgaacctctcccacacccaaatttgaaccaagtaaaagggtgattcaagag |
20036453 |
T |
|
| Q |
252 |
taacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaac |
351 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
20036454 |
taacttctaaaggaagtctatcaccaccaacatgacattttgacaaatcaacaattgttttcttaaacaaagttaaatccttatatagactagctaaaac |
20036553 |
T |
|
| Q |
352 |
agccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttct-aggaaaaacaaaaat |
450 |
Q |
| |
|
||| ||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| || |||| | |||||||||||||| |
|
|
| T |
20036554 |
agcaggtgctaaagcaatacgatttcctctagcaagatatacagcaataggaaacaaagaacttttcaccaa-atagtttttatgaggaaaaacaaaaag |
20036652 |
T |
|
| Q |
451 |
tgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatcca |
519 |
Q |
| |
|
||| ||||||| | ||| |||||||| ||||||| ||||||||||||||| ||||||| ||||||||| |
|
|
| T |
20036653 |
tgacaaccaagtagcaagaaatgcttcatgttcaatttcactacctttatcaatgaaaatatccatcca |
20036721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 524
Target Start/End: Complemental strand, 26647502 - 26646999
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||| | |||| | ||| |||||||||| ||| ||||||||||||||||||| | |||| | |||| | || ||||||| |||| |
|
|
| T |
26647502 |
catcatttggataaaacaattcacacttatcagcatatctaacataaggacgccaaagaaaatcatcaacagccgaatctagtgcccacttaacactgtc |
26647403 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
||||| |||| | ||| ||||||| |||||||| ||||||||||| |||||||||| ||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
26647402 |
aattttcaagatcttaaccttatgccacctaaacaacaaagggtctccttggttgatcaaattgggttgtggttgtaaatttttgaacctttcccacacc |
26647303 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaa |
317 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||||||| |||||||||| |
|
|
| T |
26647302 |
caaatttgaaccaagtaaaagggtgattgaagagtaacttccaaaggatatctatcaccaccatcagaaatttttttcaaatcaacaagtgttttcttaa |
26647203 |
T |
|
| Q |
318 |
acacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaactttt |
417 |
Q |
| |
|
||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
26647202 |
acaaacttaaatccttatataagctagctaaaacagccggtgccaaagcaattggattccctctagcaagatgaacagcaataggaaacaaacaactttt |
26647103 |
T |
|
| Q |
418 |
caccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatc |
517 |
Q |
| |
|
|||||| || | | |||||||||| ||| ||| ||||||| | || ||||||||| ||||||| |||||||||||||||||||||| ||| ||| |
|
|
| T |
26647102 |
caccaa-atttagat--gaggaaaaacataaactgacaaccaagtagaaaggaatgcttcatgttcaatttcactacctttatccatgaaactatcgatc |
26647006 |
T |
|
| Q |
518 |
cataatg |
524 |
Q |
| |
|
||||||| |
|
|
| T |
26647005 |
cataatg |
26646999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 531
Target Start/End: Complemental strand, 19956585 - 19956072
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||||| ||||||| || | ||||| || |||||||||||||||||| |||| |||||| |||||||| ||| | |||||||||| |
|
|
| T |
19956585 |
catcatttggataaaatagcccacatttatgagaatatcgaacatatggacgccaaagaaagtcatccatagccgagtctaatgccatcctaacattgtc |
19956486 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
|| | ||||| | ||| ||||||| |||||||| ||||||| | | |||| | |||||||||||| || ||||| ||||||||||| ||||||||| |
|
|
| T |
19956485 |
aactatcaagggcttaaccttatgccacctaaacaaaaaagggttcctatggttcaacaacatgggttgtggctgtaaatttttgaacctttcccacacc |
19956386 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaa |
317 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||||| | ||||||| | |
|
|
| T |
19956385 |
caaatttgaaccaagtaaaagggtgattgaagagtaagttctgaaggatatctatcaccacccacaggatattttgacaaatcaactgtttttttcttta |
19956286 |
T |
|
| Q |
318 |
acacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaactttt |
417 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||||||||||| ||||||| |
|
|
| T |
19956285 |
acaaagttaaatccttatatatgctagctaaaacagctggtgccaaagcaataggatttcctctagcaagatgaacaacaataggaaacaaataactttt |
19956186 |
T |
|
| Q |
418 |
caccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatc |
517 |
Q |
| |
|
||| | |||| ||| |||||||||||||| ||||||| | ||| || ||||| ||||||| ||||||||||||||| ||||||| ||||||| |
|
|
| T |
19956185 |
cacggaagaatatttatgagggaaaacaaaaattgacaaccaagtagcaagaaaagcttcatgttcaatttcactacctttatcaatgaaaatatccatc |
19956086 |
T |
|
| Q |
518 |
cataatgatattct |
531 |
Q |
| |
|
|||| |||| |||| |
|
|
| T |
19956085 |
catagtgatgttct |
19956072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 20 - 552
Target Start/End: Complemental strand, 19951620 - 19951091
Alignment:
| Q |
20 |
tcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaa |
119 |
Q |
| |
|
||||| |||||||| | ||||| | ||| |||||||||| |||||||||||||| ||||||| ||||| ||||||| | | | |||||| || | |
|
|
| T |
19951620 |
tcattcggataaaacattccacacttatcagcatatctaacatatggacgccaaataaaatcacccatagctgcgtctaatgctaacctaacatcgtgga |
19951521 |
T |
|
| Q |
120 |
tttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacaccca |
219 |
Q |
| |
|
|| ||||| | ||| ||||||| |||||||| |||||||||||| |||| ||| ||||||||| |||||||| ||||| ||||||||||| | ||| |
|
|
| T |
19951520 |
ttctcaagggcttaaccttatgccacctaaacaaaaaagggtctccatggtttatcggcatgggttgtggttgtaaatttttaaacctctcccaaatcca |
19951421 |
T |
|
| Q |
220 |
aatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaaca-gataattttgacaaatcaacaatggttttcttaaa |
318 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||| ||||| |
|
|
| T |
19951420 |
aatttgaaccaagtaaaagggtgattgaagagtaagttctaaaggatatctatcaccacccacatgat-attttgacaaatcaacaattgcttttttaaa |
19951322 |
T |
|
| Q |
319 |
cacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttc |
418 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| | | || |||| || |
|
|
| T |
19951321 |
caaagttaaatccttatatatgctagctaaaacagctggagccaaagcaataggatttcctctagcaagatgaatagcaataggtagcgaataactcctc |
19951222 |
T |
|
| Q |
419 |
accaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatcc |
518 |
Q |
| |
|
|||| || ||| | ||||||||||||||| ||| ||||||| ||||| ||| ||||| ||||||| ||||||||||||||| |||||| |||||||| |
|
|
| T |
19951221 |
acca--atttattat-taggaaaaacaaaaagtgacaaccaagtaacaaggaaggcttcatgttcaatttcactacctttatcagtgaaaatatccatcc |
19951125 |
T |
|
| Q |
519 |
ataatgatattcttggcttacctgttttagtctt |
552 |
Q |
| |
|
|||||| | ||| | | |||||||||||||||| |
|
|
| T |
19951124 |
ataatgttgctctagccatacctgttttagtctt |
19951091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 50 - 519
Target Start/End: Complemental strand, 19849465 - 19848990
Alignment:
| Q |
50 |
gcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaa |
149 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| |||||| || ||| |||||||||||| |
|
|
| T |
19849465 |
gcatatctagcatatggacgccaaagaaaatcatccatagccgagtctaatgccaacctaacattgtcaattttcaaggcctgaaccttatgccatctaa |
19849366 |
T |
|
| Q |
150 |
acaataaagggtctccacggttgatcaacatgggttgcggttgt------aagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtga |
243 |
Q |
| |
|
|||||||||| || ||| ||||| ||||||||| ||| || ||| || ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
19849365 |
acaataaaggatccccatggttggtcaacatggtttgtggctgtggttgcaaatttttgaacctctcccacacccaaatttgaaccaaataaaagggtga |
19849266 |
T |
|
| Q |
244 |
ttgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgcta |
343 |
Q |
| |
|
|| |||||||| || || ||| ||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||| ||| |
|
|
| T |
19849265 |
tttaagagtaatctccaagggaaatctatcaccaccaacatgacattttgacaaatcagtgattgttttcttaaacaaagttaaatccttatatagacta |
19849166 |
T |
|
| Q |
344 |
gctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttct-aggaaaa |
442 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| || |||| | ||||||| |
|
|
| T |
19849165 |
gctaaaacagcaggtgctaaagcaatacgatttcctctagcaagatatacagcaataggaaacaaagaacttttcaccaa-atagtttttatgaggaaaa |
19849067 |
T |
|
| Q |
443 |
acaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatcca |
519 |
Q |
| |
|
||||||| ||| ||||||| | ||| |||||||| ||||||| ||||||||||||||| ||||||| ||||||||| |
|
|
| T |
19849066 |
acaaaaagtgacaaccaagtagcaagaaatgcttcatgttcaatttcactacctttatcaatgaaaatatccatcca |
19848990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 531
Target Start/End: Complemental strand, 19838894 - 19838381
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||| | |||| | ||| | ||||| || |||||||||||||||||| |||| |||||| ||||||| ||| | ||| |||||| |
|
|
| T |
19838894 |
catcatttggataaaacagttcacacttatcagaatatcgaacatatggacgccaaagaaagtcatccatagccgagtctaaagccatcctaatattgtc |
19838795 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
|||| |||||| | || ||||||| |||||||| |||||||| || |||| | |||||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
19838794 |
aattatcaaggccttaactttatgccacctaaacaaaaaagggtccccctggttcaacaacattggttgtggttgtaaatttttgaacctctcccacacc |
19838695 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaa |
317 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| | ||||||| | |
|
|
| T |
19838694 |
caaatttgaaccaagtaaaagggtgattgaagagtaacttctaaaggatatgtatcacaaccaacaggatgttttgacaaatcaactgtttttttcttta |
19838595 |
T |
|
| Q |
318 |
acacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaactttt |
417 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||| | ||||| |
|
|
| T |
19838594 |
acaaagttaaatcattatatatgctagctaaaacagctggtgccaaagcaatagaatttcctctagcaagatgaacaacaattggaaacaaaaagctttt |
19838495 |
T |
|
| Q |
418 |
cac-caacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccat |
516 |
Q |
| |
|
||| ||| | | || ||||||||||||||||||| ||||||| | | | || ||||| ||||||| ||| ||||||||||| ||||||| |||||| |
|
|
| T |
19838494 |
cacgcaaga-gtgttgattaggaaaaacaaaaattgacaaccaagtagctagaaaagcttcatgttcaatttcgctacctttatcgatgaaaatatccat |
19838396 |
T |
|
| Q |
517 |
ccataatgatattct |
531 |
Q |
| |
|
||||| |||| |||| |
|
|
| T |
19838395 |
ccatagtgatgttct |
19838381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 18 - 650
Target Start/End: Complemental strand, 19812784 - 19812149
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||| | |||| | ||| |||||||||| ||||||||||||||||||||||| | |||| ||||||| | | | |||||||||| |
|
|
| T |
19812784 |
catcatttggataaaacaatgcacacttatcggcatatctaacatatggacgccaaagaaaatcatccacagccgagtctaacgctaacctaacattgtc |
19812685 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgg------gttgcggttgtaagtttttgaacctctcc |
211 |
Q |
| |
|
|||| ||| | ||| ||||||| |||||||| |||||||| ||| ||||||||||||| | |||| ||||| || ||||||||||||||| |
|
|
| T |
19812684 |
aattgataagtccgtaaccttatgccacctaaacaaaaaagggtcgccatggttgatcaacatagtttgttgttgtggttgcaaatttttgaacctctcc |
19812585 |
T |
|
| Q |
212 |
cacacccaaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttt |
311 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
19812584 |
caaacccaaatttgaaccaagtaaaagggtgattgaagagtaatctccaagggaaatctatcaccaccaacaggatattttgacaaatcaacaattgttt |
19812485 |
T |
|
| Q |
312 |
tcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaaga |
411 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| || ||||| |||||||||||||||| || |||||||||||| ||||||| || ||||||||||| |
|
|
| T |
19812484 |
tcttaaacaaacttaaatctttatatatgctagccaagacagctggtgccaaagcaataggataccctctagcaagaagaatagcgatcggaaacaaaga |
19812385 |
T |
|
| Q |
412 |
acttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaaca |
511 |
Q |
| |
|
|||||||||| || |||| |||||||||||||||||| ||||||| | ||| |||||||| ||||||| ||||||||||||| | | ||||| | |
|
|
| T |
19812384 |
ctttttcaccaa-at--atttatgaggaaaaacaaaaattgacaaccaagtagcaagaaatgcttcatgttcaatttcactacctttaccaacgaaaata |
19812288 |
T |
|
| Q |
512 |
tccatccataatgatattcttggcttacctgttttagtctttttaagttcctttcttgcattgatcatcttcttttccaccactctcatttctcggtctt |
611 |
Q |
| |
|
| |||||| |||| | | | ||||||| ||||| ||| | ||| | ||||||| ||| | ||||||||||||| ||||||||||| |||||| |
|
|
| T |
19812287 |
ttgatccattttgatgtggtagccttaccttttttactctgccaaggtttccgtcttgcaaggatgagcttcttttccacctctctcatttcttggtctt |
19812188 |
T |
|
| Q |
612 |
taacattcgcgaaaataggatcaccaatgacagggtaac |
650 |
Q |
| |
|
||| || | ||||||||||||||||||| |||||||| |
|
|
| T |
19812187 |
gaactttggtaaaaataggatcaccaatgatagggtaac |
19812149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 52 - 526
Target Start/End: Complemental strand, 20046587 - 20046116
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| || || |||||||| ||| ||||||||| ||||||| ||| || || ||| ||||||| |||||| |
|
|
| T |
20046587 |
atatctaacatatggacgccaaagaaaatcatcgacagttgagtctaatgccaacttaacattatcaattttcaatgcgtgaaccttatgccacctaaac |
20046488 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagag |
251 |
Q |
| |
|
||||||||||| | | ||||||||||||||||| ||| |||| ||| |||||||||||||||||||| ||||||||| ||||| |||||| ||| || |
|
|
| T |
20046487 |
aataaagggtcgctgggattgatcaacatgggttgtggtggtaattttgcgaacctctcccacacccaaacttgaaccaaataaaagggtgatagaatag |
20046388 |
T |
|
| Q |
252 |
taacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaac |
351 |
Q |
| |
|
||| ||| | |||| |||||||||||||||| | ||||| ||| ||||| ||| || |||||||| | ||||||||||||||||||||| | ||||| |
|
|
| T |
20046387 |
taaattcaacaggaaatctatcaccaccaaccggatattttaacagatcaataattgtgttcttaaataaacttaaatccttatatatgctacccaaaac |
20046288 |
T |
|
| Q |
352 |
agccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttct-aggaaaaacaaaaat |
450 |
Q |
| |
|
||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| || |||||||| | || |||| | ||||||||||||||| |
|
|
| T |
20046287 |
agcaggtgccaaagcaattggatttcctctagcaagattaatagcaatagaaaacaaacaatttttcacc-atat---ttttatgaggaaaaacaaaaat |
20046192 |
T |
|
| Q |
451 |
tgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccataatgat |
526 |
Q |
| |
|
||| ||||||| | || ||| ||||||||||||| ||||||||||||||| ||||| | |||||||||||||||| |
|
|
| T |
20046191 |
tgacaaccaagtagtaaggaaggcttcgtgttcaatttcactacctttatcgatgaacatatccatccataatgat |
20046116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 52 - 650
Target Start/End: Complemental strand, 19819027 - 19818426
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
||||| || |||||||||||||||||| |||| ||||| |||||||| ||| | |||||||||||||||||||||| || || |||||| |||||| |
|
|
| T |
19819027 |
atatcgaacatatggacgccaaagaaagtcatccttagccgagtctaatgccatcctaacattgtcaatttccaaggcctgaacatcatgccacctaaac |
19818928 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcgg------ttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgatt |
245 |
Q |
| |
|
|| |||||||||||| |||| |||||||||| ||| || ||| | ||||||||||||||||||||||| ||||||||||| ||||| ||||||| |
|
|
| T |
19818927 |
aaaaaagggtctccatggtttatcaacatggtttgtggcagtggttgcatatttttgaacctctcccacacccatatttgaaccaaataaaagggtgatt |
19818828 |
T |
|
| Q |
246 |
gaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagc |
345 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||| |||||||| ||||| ||| |||| |
|
|
| T |
19818827 |
gaagagtaagttctaaaggaaatctatcaccaccaacagaatattttgacaaatcaactatttttttcttaaacaaacttaaatctttataaatgttagc |
19818728 |
T |
|
| Q |
346 |
taaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttctaggaaaaaca |
445 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||| || ||||| |||||||| | || |||||||||| || | || |||||||||| |
|
|
| T |
19818727 |
caaaacagccggtgccaaagcaataggattccctctagcaagattaacagcaacaggaaacagataatttttcaccaa-attc--ttatgaggaaaaaca |
19818631 |
T |
|
| Q |
446 |
aaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccataatgatattcttggcttacctgttt |
545 |
Q |
| |
|
|||||||||||||||| | ||| || ||||| ||||||| ||| |||||||| | || |||| ||||||||| |||| | | | |||| || | |
|
|
| T |
19818630 |
aaaattgataaccaagtagcaagaaaagcttcatgttcaatttcggtacctttaccaataaaaatttccatccattttgatgtggtagccttagcttgat |
19818531 |
T |
|
| Q |
546 |
tagtctttttaagttcctttcttgcattgatcatcttcttttccaccactctcatttctcggtctttaacattcgcgaaaataggatcaccaatgacagg |
645 |
Q |
| |
|
|||||| | ||| || ||||||| |||| | ||||||||| ||| ||||||||||| | |||||||| || ||||| |||||||||||||| ||| |
|
|
| T |
19818530 |
tagtctgccaaggtttctgtcttgcaatgatgagcttcttttcaacctctctcatttcttgatctttaactttgatgaaaacaggatcaccaatgatagg |
19818431 |
T |
|
| Q |
646 |
gtaac |
650 |
Q |
| |
|
|||| |
|
|
| T |
19818430 |
ataac |
19818426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 52 - 516
Target Start/End: Complemental strand, 26653615 - 26653155
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| || || |||||||| ||| | | ||||||| |||| | ||| | ||| ||||||| || ||| |
|
|
| T |
26653615 |
atatctaacatatggacgccaaagaaaatcatcaattgctgagtctaatgccaacctcacattgtaaattataagggcata-accttatgccacctcaac |
26653517 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagag |
251 |
Q |
| |
|
||| || ||||| ||| ||||||||| ||||||| ||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| |
|
|
| T |
26653516 |
aatgaatggtcttcactattgatcaacttgggttgtggttgcaaatttgtgaacctctcccacacccaaatttgaaccaagtaaaagggtgatcgtagat |
26653417 |
T |
|
| Q |
252 |
taacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaac |
351 |
Q |
| |
|
||||||| |||||| ||||||||||||||||| | ||||||||||| ||||||| ||||||||||||| | || ||||||||||| ||||||||||| |
|
|
| T |
26653416 |
taacttccaaaggaaatctatcaccaccaacataatattttgacaaaccaacaattgttttcttaaacaaagtcaagtccttatatatactagctaaaac |
26653317 |
T |
|
| Q |
352 |
agccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttctaggaaaaacaaaaatt |
451 |
Q |
| |
|
||| |||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| | || | | | |||||||||||||||| |
|
|
| T |
26653316 |
agctggtgccaaagcaataggatttcctctagcaagatgaacagcaatagaaaacaaagaacttttcacta--attc-tatatgaggaaaaacaaaaatt |
26653220 |
T |
|
| Q |
452 |
gataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccat |
516 |
Q |
| |
|
|| |||||||| ||| |||||| || ||||||| ||||||||||| || ||||||| |||||| |
|
|
| T |
26653219 |
gacaaccaagctgcaaggaatgcatcatgttcaatttcactaccttagtcaatgaaaatatccat |
26653155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 18 - 320
Target Start/End: Complemental strand, 17115214 - 17114912
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||||| | ||||| | ||| |||||||||| |||||||||||||||||||||| || ||| ||||||||| | |||||||||||||| |
|
|
| T |
17115214 |
catcatttggataaaacattccacacttatcagcatatctaatgtatggacgccaaagaaaatcatcgacagctaagtctaatgctagcttaacattgtc |
17115115 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
||||| || ||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||| | |
|
|
| T |
17115114 |
aattttcacggcctgaaccctatgccacctaaacaataaagggtctccatggttgatcaacatggattgtggttgtaaatttttgaacctctcccacatc |
17115015 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaa |
317 |
Q |
| |
|
|||||||||||||||||||| || | || ||| ||||||||||||| ||||||||||| ||||| |||||||||||||| ||| |||||||||| |
|
|
| T |
17115014 |
caaatttgaaccaagtaaaagggcattcgacgagcaacttctaaaggaaatctatcaccataaacaggattttttgacaaatcaataatagttttcttaa |
17114915 |
T |
|
| Q |
318 |
aca |
320 |
Q |
| |
|
||| |
|
|
| T |
17114914 |
aca |
17114912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 138 - 521
Target Start/End: Complemental strand, 19989903 - 19989520
Alignment:
| Q |
138 |
tatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaa |
237 |
Q |
| |
|
||||||| |||||||| ||||||||| || |||||||| ||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
19989903 |
tatgccacctaaacaaaaaagggtcttcatagttgatcagcatgggttgtggttgtaaatttttgaacctctcccaaacccaaacttgaaccaagtaaaa |
19989804 |
T |
|
| Q |
238 |
cggtgattgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatat |
337 |
Q |
| |
|
|||||||||||| || | || | ||| ||||||||||||||||| | ||||||||||| ||| | | ||||||| | | |||||||||||| |
|
|
| T |
19989803 |
gggtgattgaagaatagcctccatgggaagtctatcaccaccaacaggaagttttgacaaattaactaatatgttcttaagtaaacctaaatccttatac |
19989704 |
T |
|
| Q |
338 |
atgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttct-a |
436 |
Q |
| |
|
| ||||| ||||| || ||||| || ||||||| |||||||||||||||||||||||||| | |||| |||||||| |||| ||||| | |||| | | |
|
|
| T |
19989703 |
aaactagccaaaactgcaggtgctaatgcaataggatttcctctagcaagatgaatagcaacacgaaagaaagaactattca-caacacgacttttataa |
19989605 |
T |
|
| Q |
437 |
ggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccata |
521 |
Q |
| |
|
||| |||||||||||| ||||||| | ||| |||||||| ||||||| |||| |||||||||| ||||||||||||||||||| |
|
|
| T |
19989604 |
ggatgaacaaaaattgacaaccaagtagcaagaaatgcttcatgttcaagttcattacctttatcaatgaaaacatccatccata |
19989520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 19832336 - 19832123
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
||||| || |||||||||||||||||| |||| |||||||||||||| ||| | |||||||||||||| ||||||| | ||| ||||||| |||||| |
|
|
| T |
19832336 |
atatcgaacatatggacgccaaagaaagtcatccttagccaagtctaatgccatcctaacattgtcaattaccaaggccttaaccttatgccacctaaac |
19832237 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagag |
251 |
Q |
| |
|
|| || || || || ||| | |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
19832236 |
aaaaatggttcccctttgttcaacaacatgggttgtggatgtaaatttttgaacctctcccacacccaaatttgaaccaagtaaaagggtgattgaagag |
19832137 |
T |
|
| Q |
252 |
taacttctaaagga |
265 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19832136 |
taacttctaaagga |
19832123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 19858568 - 19858343
Alignment:
| Q |
20 |
tcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaa |
119 |
Q |
| |
|
|||||||||||||| | ||||| | |||||||||||||| || |||||||||| |||||||| |||||| |||||||| ||| |||||||||||||| |
|
|
| T |
19858568 |
tcatttggataaaacagtccacacttatctgcatatctaacgtaaggacgccaaataaaatcatcaatagccgagtctaatgccaacttaacattgtcaa |
19858469 |
T |
|
| Q |
120 |
tttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacaccca |
219 |
Q |
| |
|
|| |||||| | ||| ||||||| |||||||||||||| |||||| | ||||||||||||||||| || | ||| ||||||||||| ||||| ||||| |
|
|
| T |
19858468 |
ctttcaaggccttaaccttatgccacctaaacaataaaggttctccatgcttgatcaacatgggttgtggctctaaatttttgaacctttcccaaaccca |
19858369 |
T |
|
| Q |
220 |
aatttgaaccaagtaaaacggtgatt |
245 |
Q |
| |
|
|| ||||| ||||||||| ||||||| |
|
|
| T |
19858368 |
aacttgaagcaagtaaaagggtgatt |
19858343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 146 - 509
Target Start/End: Complemental strand, 30915016 - 30914653
Alignment:
| Q |
146 |
ctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgatt |
245 |
Q |
| |
|
||||||||| |||||||||| ||||||| ||||| | |||||||| || ||||| ||||||||||| ||||||||||| ||||||| ||| ||||| | |
|
|
| T |
30915016 |
ctaaacaatgaagggtctccctggttgataaacatagtatgcggttgcaaattttttaacctctcccaaacccaaatttgtaccaagtcaaagggtgagt |
30914917 |
T |
|
| Q |
246 |
gaagagtaacttctaaaggatatctatcaccaccaac-agataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctag |
344 |
Q |
| |
|
|||||||||| || | |||| |||||||||||||||| ||| ||||||||||| |||| || ||||||||||||| |||||||| || |||||||||| |
|
|
| T |
30914916 |
gaagagtaacctccataggacatctatcaccaccaacttgat-attttgacaaaccaactattgttttcttaaacaaacttaaatctttgtatatgctag |
30914818 |
T |
|
| Q |
345 |
ctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaata---gcaataggaaacaaagaacttttcaccaacatgcattttctaggaaa |
441 |
Q |
| |
|
| || ||||| || |||| | || |||||||||||||||||| ||||||||||||||| ||||||||||||| || ||| ||| || |
|
|
| T |
30914817 |
ccaatttttttggtgctaatgcaacaatgttccctctagcaagatgaataggcgcaataggaaacaaaaaacttttcaccaa-at--ctttgtgagggaa |
30914721 |
T |
|
| Q |
442 |
aacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaa |
509 |
Q |
| |
|
|||||||||||| ||||||| | || ||||||||| ||||||| ||||||| ||||||| ||||||| |
|
|
| T |
30914720 |
aacaaaaattgacaaccaagtagtaaggaatgcttcatgttcaatttcactaactttatcaatgaaaa |
30914653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 18 - 519
Target Start/End: Complemental strand, 19944215 - 19943720
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||||||||||||| |||| ||||| | ||| |||||| || ||| ||||| |||| ||||||||||||||| | |||||| ||| | |||||||| |
|
|
| T |
19944215 |
catcatttggataatatactccacacttatcagcatattgaacataaggacggcaaataaaatcattgatagctgaatctaatgccaaccccacattgtc |
19944116 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
||||| |||||| | || ||||||| || ||||||| | |||||||| ||||||||| | ||||| || || || ||||||||||| ||||| ||| |
|
|
| T |
19944115 |
aattttcaaggccttaacattatgccacctcaacaatacatggtctccattattgatcaactttggttgtggctgcaaatttttgaacctttcccaaacc |
19944016 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattgaagagtaacttc-----taaagg--atatctatcaccaccaacagataattttgacaaatcaacaatggtt |
310 |
Q |
| |
|
|||| |||||||| |||||| |||||||| | | |||| || |||||| | || ||||| || ||||| |||||||||||| | |
|
|
| T |
19944015 |
caaacttgaaccaggtaaaagggtgattgtacattaacgtccaacataaagggaaaatttatcaggac---------attttttcaaatcaacaatttgt |
19943925 |
T |
|
| Q |
311 |
ttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaag |
410 |
Q |
| |
|
|||||||||| || ||||||||||||| |||||| |||||||| ||||||||||| |||| | | |||||||||||||||| ||||||||||||| || |
|
|
| T |
19943924 |
ttcttaaacaaactcaaatccttatataagctagccaaaacagcaggtgccaaagccataggaatccctctagcaagatgaacagcaataggaaac--ag |
19943827 |
T |
|
| Q |
411 |
aacttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaac |
510 |
Q |
| |
|
|||||||||||| || || | ||||||||| ||||||| ||||||| | ||| |||||||| ||||||| ||||||||||||||| ||||||| |
|
|
| T |
19943826 |
aacttttcaccacattgtatctatgaggaaaaac--aaattgacaaccaagtagcaagaaatgcttcatgttcaatttcactacctttatcgatgaaaat |
19943729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 296 - 519
Target Start/End: Original strand, 24839869 - 24840092
Alignment:
| Q |
296 |
aaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatag |
395 |
Q |
| |
|
||||||||||| || |||||||||| |||||||| ||||||| |||||| |||||||| |||||||||| ||||| ||| |||||||| ||||||| || |
|
|
| T |
24839869 |
aaatcaacaattgtgttcttaaacaaccttaaatcgttatataagctagccaaaacagcaggtgccaaagaaataggattccctctagctagatgaacag |
24839968 |
T |
|
| Q |
396 |
caataggaaacaaagaacttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacc |
495 |
Q |
| |
|
||| |||||||||||||| |||||| | | |||| ||| |||||||||||||| ||||||| | ||| |||||||| || |||||||||||||| |
|
|
| T |
24839969 |
caacaggaaacaaagaacatttcactagagagtatttatgagggaaaacaaaaattgacaaccaagtagcaagaaatgcttcatgctcaacttcactacc |
24840068 |
T |
|
| Q |
496 |
tttatccatgaaaacatccatcca |
519 |
Q |
| |
|
|||||| ||||||| ||||||||| |
|
|
| T |
24840069 |
tttatcgatgaaaatatccatcca |
24840092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 310 - 519
Target Start/End: Complemental strand, 19858281 - 19858072
Alignment:
| Q |
310 |
tttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaa |
409 |
Q |
| |
|
||||||||||| || ||||| ||||||| |||||| |||||||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19858281 |
tttcttaaacaaactcaaatcgttatataagctagccaaaacagcaggtgccaaagcgatagtatttcctctagcaagaccaatagcaataggaaacaaa |
19858182 |
T |
|
| Q |
410 |
gaacttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaa |
509 |
Q |
| |
|
|| |||||||| | | || | ||||||||||||||||||| ||||||| | ||| |||||||| || |||| ||||||||||||||| ||||||| |
|
|
| T |
19858181 |
gatcttttcacattaaagtatctattaggaaaaacaaaaattgacaaccaagtagcaagaaatgcttcatgctcaatttcactacctttatcgatgaaaa |
19858082 |
T |
|
| Q |
510 |
catccatcca |
519 |
Q |
| |
|
||||||||| |
|
|
| T |
19858081 |
tatccatcca |
19858072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 296 - 499
Target Start/End: Complemental strand, 19853735 - 19853532
Alignment:
| Q |
296 |
aaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatag |
395 |
Q |
| |
|
||||||||||| |||||||||||| || ||||| ||||||| |||||| |||||||| |||||||||||||||| ||| |||||||||||| |||||| |
|
|
| T |
19853735 |
aaatcaacaatttttttcttaaacaaactcaaatcgttatataagctagccaaaacagcaggtgccaaagcaatagtattacctctagcaagacgaatag |
19853636 |
T |
|
| Q |
396 |
caataggaaacaaagaacttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacc |
495 |
Q |
| |
|
|||||||||||||||| |||||||| | | | || | ||||||||||||||| || ||||||| | ||| |||||||| ||||||| ||||||||| |
|
|
| T |
19853635 |
caataggaaacaaagatcttttcacaataaagtatctatgaggaaaaacaaaaatagacaaccaagtagcaagaaatgcttcatgttcaatttcactacc |
19853536 |
T |
|
| Q |
496 |
ttta |
499 |
Q |
| |
|
|||| |
|
|
| T |
19853535 |
ttta |
19853532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 19971835 - 19971710
Alignment:
| Q |
295 |
caaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaata |
394 |
Q |
| |
|
|||||||||||| ||||||||||| || |||||||||||| |||||| ||||||| |||||||||||||||| ||| |||||| | | ||||||| |
|
|
| T |
19971835 |
caaatcaacaatttgtttcttaaacagagttcaatccttatataagctagccaaaacagttggtgccaaagcaatagtattgcctctaaccaaatgaata |
19971736 |
T |
|
| Q |
395 |
gcaataggaaacaaagaacttttcac |
420 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
19971735 |
gcaataggaaacaaagaacttttcac |
19971710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 24839594 - 24839822
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtc |
117 |
Q |
| |
|
|||| ||||||||||| || ||||| | ||| ||||| || ||| |||||||||| |||||||| ||| | |||||||| ||| | | |||||||| |
|
|
| T |
24839594 |
catcctttggataaaacactccacacttatcaacatattgaacataaggacgccaaataaaatcatcgatgactgagtctaatgccaacctcacattgtc |
24839693 |
T |
|
| Q |
118 |
aatttccaaggcttgtaccctatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacc |
217 |
Q |
| |
|
||||| |||||| | || ||||||| || ||||||| | |||||| | ||| |||| ||||||| || || || ||||||||||| ||||| ||| |
|
|
| T |
24839694 |
aattttcaaggccttaacattatgccacctcaacaatacatggtctcgattattgcccaacttgggttgtggctgcaaatttttgaacctttcccaaacc |
24839793 |
T |
|
| Q |
218 |
caaatttgaaccaagtaaaacggtgattg |
246 |
Q |
| |
|
|||| |||||||| |||||| |||||||| |
|
|
| T |
24839794 |
caaacttgaaccaggtaaaagggtgattg |
24839822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 19853872 - 19853755
Alignment:
| Q |
138 |
tatgccatctaaacaataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaa |
237 |
Q |
| |
|
||||||| || ||||||| | |||||||| |||||||||| | ||||| || || || ||| |||| ||||||||||||||| ||| ||||||||||| |
|
|
| T |
19853872 |
tatgccacctcaacaatacatggtctccattgttgatcaacttcggttgtggctgcaaatttatgaatctctcccacacccaagcttgtaccaagtaaaa |
19853773 |
T |
|
| Q |
238 |
cggtgattgaagagtaac |
255 |
Q |
| |
|
|||||||| ||| |||| |
|
|
| T |
19853772 |
gggtgattgcagattaac |
19853755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 26652214 - 26652115
Alignment:
| Q |
20 |
tcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaa |
119 |
Q |
| |
|
|||||||||||||| || |||| | ||||||||| | || ||| |||||||||| ||||||||||||||| | |||||| ||| | | |||||||||| |
|
|
| T |
26652214 |
tcatttggataaaacacttcacacttatctgcataccgaacataaggacgccaaataaaatcattgatagctgaatctaatgccaacctcacattgtcaa |
26652115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 650
Target Start/End: Complemental strand, 19838319 - 19838253
Alignment:
| Q |
584 |
ttttccaccactctcatttctcggtctttaacattcgcgaaaataggatcaccaatgacagggtaac |
650 |
Q |
| |
|
||||||||| ||||||||||| ||||||| || | | ||||| || |||||||||||||||||||| |
|
|
| T |
19838319 |
ttttccacctctctcatttcttggtctttgacttcggtgaaaacagaatcaccaatgacagggtaac |
19838253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 650
Target Start/End: Complemental strand, 19956010 - 19955944
Alignment:
| Q |
584 |
ttttccaccactctcatttctcggtctttaacattcgcgaaaataggatcaccaatgacagggtaac |
650 |
Q |
| |
|
||||||||| ||||||||||| ||||||| || | | ||||| || |||||||||||||||||||| |
|
|
| T |
19956010 |
ttttccacctctctcatttcttggtctttgacttcggtgaaaacagaatcaccaatgacagggtaac |
19955944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 650
Target Start/End: Complemental strand, 20046058 - 20045992
Alignment:
| Q |
584 |
ttttccaccactctcatttctcggtctttaacattcgcgaaaataggatcaccaatgacagggtaac |
650 |
Q |
| |
|
||||||||| ||||||||||| |||||||||| || | ||||| | |||| ||||||| |||||||| |
|
|
| T |
20046058 |
ttttccacctctctcatttcttggtctttaactttggtgaaaacatgatcgccaatgatagggtaac |
20045992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 145; Significance: 6e-76; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 50 - 541
Target Start/End: Complemental strand, 1717686 - 1717192
Alignment:
| Q |
50 |
gcatatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccc-tatgccatcta |
148 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||| |||||||| || | |||||| ||||||| |||| ||| ||| | || |||| ||| |
|
|
| T |
1717686 |
gcatatctaacatatggacgccaaataaaatcatcaatagctgagtctaatgtcaacctaacatcttcaattttcaagtctt-tactcatacgccaccta |
1717588 |
T |
|
| Q |
149 |
aacaataaagggtctccacggttgatcaacatgg------gttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtg |
242 |
Q |
| |
|
||| | ||||||||||| ||||| ||| | ||| |||| | |||||| |||||||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
1717587 |
aaccaaaaagggtctccgtggttggtcatcgtggtttttagttgtgattgtaaacttttgaaccttcccaacacccaaatttgaaccaagtaaaagggtg |
1717488 |
T |
|
| Q |
243 |
attgaagagtaacttctaaaggatatctatcaccaccaacagataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgct |
342 |
Q |
| |
|
|||||||| |||| || || | ||||||| |||||||||| ||||||||||| |||| || ||||||||||||| ||||||||||||||||||| |
|
|
| T |
1717487 |
attgaagactaacctccttagaaaatctatcgccaccaacaggatattttgacaaaccaactattgttttcttaaacaaagttaaatccttatatatgct |
1717388 |
T |
|
| Q |
343 |
agctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttctaggaaaa |
442 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| | || ||| ||||||| |
|
|
| T |
1717387 |
agctaaaacagccggtgccaaagcaataggatttcctctagcaagatgaacagcaataggaaacaaagattttttcacca--aagc-tttatgaggaaaa |
1717291 |
T |
|
| Q |
443 |
acaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccataatgatattcttggcttacct |
541 |
Q |
| |
|
||| ||| || ||||||| | ||| |||||||| ||||||| ||||||||||||||| | ||||||||||||||||||| | |||| ||| ||||| |
|
|
| T |
1717290 |
acataaaccgacaaccaagtagcaagaaatgcttcatgttcaatttcactacctttatcaacaaaaacatccatccataatgttgttctaggcctacct |
1717192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 38483474 - 38483409
Alignment:
| Q |
18 |
catcatttggataaaatacaccacattcatctgcatatctaaaatatggacgccaaagaaaatcat |
83 |
Q |
| |
|
|||||||| ||||||| | |||||| | ||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
38483474 |
catcattttgataaaacaaaccacacttatcatcatatctaaaatatggacgctaaagaaaatcat |
38483409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 100; Significance: 4e-49; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 296 - 519
Target Start/End: Original strand, 22689550 - 22689773
Alignment:
| Q |
296 |
aaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatag |
395 |
Q |
| |
|
||||||||||| ||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||| ||| |||||||| |||||||||| |
|
|
| T |
22689550 |
aaatcaacaatttgtttcttaaacaaactcaaatccttatatatgctagccaaaacagcaggtgccaaagcaatagtattgcctctagccagatgaatag |
22689649 |
T |
|
| Q |
396 |
caataggaaacaaagaacttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacc |
495 |
Q |
| |
|
||||| ||||||||||||||| ||| |||| ||| |||||||||||||||||| ||||||| | ||| |||||||| ||||||| |||| |||| |
|
|
| T |
22689650 |
aaatagtaaacaaagaacttttgaccgacatatttttatgaggaaaaacaaaaattgacaaccaagtagcaagaaatgcttcatgttcaaattcattacc |
22689749 |
T |
|
| Q |
496 |
tttatccatgaaaacatccatcca |
519 |
Q |
| |
|
||||| ||||||||||||||||| |
|
|
| T |
22689750 |
attatcgatgaaaacatccatcca |
22689773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 289 - 420
Target Start/End: Original strand, 22651781 - 22651912
Alignment:
| Q |
289 |
ttttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaaga |
388 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||||| |
|
|
| T |
22651781 |
ttttgacaaatcaacaattgttttcttaaacaaagttaaatccttatacatgctagccaaaacagctggtgcaaaagcaataggatttcctctagcaaga |
22651880 |
T |
|
| Q |
389 |
tgaatagcaataggaaacaaagaacttttcac |
420 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| |
|
|
| T |
22651881 |
tgaacagcaataggaaacaaacaacttttcac |
22651912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 326 - 521
Target Start/End: Original strand, 11564059 - 11564254
Alignment:
| Q |
326 |
aaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaaca |
425 |
Q |
| |
|
||||||||||||| || ||| | ||| | |||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| |
|
|
| T |
11564059 |
aaatccttatataagcaagccagaaccgacggtgctaaagcaataggttttcctctagcaagatgaacagcaataggaaacaaagaacttttgatcaaca |
11564158 |
T |
|
| Q |
426 |
tgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccata |
521 |
Q |
| |
|
|| ||| ||||||||||||||| || | ||| ||| |||||||||||| ||||||| || |||| ||||| |||||||| |||||||||| |
|
|
| T |
11564159 |
agcttttatgaggaaaaacaaaaatggaaagccatgcagaaatgaatgcttcatgttcaattttactagctttactcatgaaaaattccatccata |
11564254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 360 - 499
Target Start/End: Original strand, 22685642 - 22685778
Alignment:
| Q |
360 |
ccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttctaggaaaaacaaaaattgataacca |
459 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||| ||||||| |||| |||||||||| || ||| |||||||||||||| ||| ||||| |
|
|
| T |
22685642 |
ccaaagcaataggattccctctagcaagatgaatagcaatcggaaacatagaagttttcaccaaaat---tttatgaggaaaaacaaaaagtgacaacca |
22685738 |
T |
|
| Q |
460 |
agcaacaatgaatgcttcgtgttcaacttcactaccttta |
499 |
Q |
| |
|
|||| ||| |||||||| || |||| ||||||||||||| |
|
|
| T |
22685739 |
agcagcaagaaatgcttcatgctcaatttcactaccttta |
22685778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 439 - 524
Target Start/End: Original strand, 22652126 - 22652211
Alignment:
| Q |
439 |
aaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccataatg |
524 |
Q |
| |
|
||||||||||||||| ||||||| | ||| ||| ||||| ||||||| ||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
22652126 |
aaaaacaaaaattgacaaccaagtagcaaggaacgcttcatgttcaatttcactacctttatcgatgaaaatatccatccataatg |
22652211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 22689445 - 22689530
Alignment:
| Q |
170 |
ttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagagtaac |
255 |
Q |
| |
|
|||||||||||||| | ||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||| |
|
|
| T |
22689445 |
ttgatcaacatgggccgtggttgcaaatttttgaacctctcccacacccaaacttgaaccaagtaaaagggtgattgcagattaac |
22689530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 11544528 - 11544343
Alignment:
| Q |
61 |
atatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaacaataaaggg |
160 |
Q |
| |
|
|||||| |||||||||||||||| |||| | |||||| ||| | | ||||| ||||||| ||||| || ||| |||||| || | || || | || |
|
|
| T |
11544528 |
atatgggcgccaaagaaaatcatccttagctgaatctaatgccaacctcacattatcaattttcaagggtttaaccaaatgccacctcatcagtacatgg |
11544429 |
T |
|
| Q |
161 |
tctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattg |
246 |
Q |
| |
|
|||||| |||||||||| |||||| ||||| || ||||||||||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
11544428 |
tctccattgttgatcaacttgggttttggttgcaaatttttgaacctctcccaaacccaaacttgaaccaagtaaatgggtgattg |
11544343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 22685596 - 22685641
Alignment:
| Q |
289 |
ttttgacaaatcaacaatggttttcttaaacacgcttaaatcctta |
334 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | |||||||||||| |
|
|
| T |
22685596 |
ttttgacaaatcaacaattgttttcttaaaaaaacttaaatcctta |
22685641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 93; Significance: 6e-45; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 169 - 522
Target Start/End: Complemental strand, 6398611 - 6398258
Alignment:
| Q |
169 |
gttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagagtaacttctaaaggatat |
268 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| ||||||||||||||||| ||| |||||||| |||||| ||||| ||||||| ||| | |||| || |
|
|
| T |
6398611 |
gttgatcaacatgagttgtggttgcaagtttgtgaacctctcccacacctaaacttgaaccacgtaaaaaggtgacaacagagtaaattcaacaggaaat |
6398512 |
T |
|
| Q |
269 |
ctatcaccaccaaca-gataattttgacaaatcaacaatggtttt-cttaaacacgcttaaatccttatatat--gctagctaaaacagccggtgccaaa |
364 |
Q |
| |
|
|||||| || ||||| |||| |||||||| ||||| ||| |||| |||||| | |||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
6398511 |
ctatcatcatcaacatgata-ttttgacatatcaataattttttttcttaaataaagttaaatccttatatatatgctagctaaaacagctggtgccaaa |
6398413 |
T |
|
| Q |
365 |
gcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaa |
464 |
Q |
| |
|
| || | |||||||||||| |||| || |||||||| ||||||| |||||||||| ||| ||| |||||||||||||||||| | |||||| | |
|
|
| T |
6398412 |
ccgattggatttcctctagcgagattaacagcaatagaaaacaaacaacttttcac---cattgttttactaggaaaaacaaaaattaacaaccaattag |
6398316 |
T |
|
| Q |
465 |
caatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccataa |
522 |
Q |
| |
|
||| ||| ||||| ||||||| |||||||||||||| || || | |||||||||||| |
|
|
| T |
6398315 |
caaggaaggcttcatgttcaatttcactacctttatagataaacatatccatccataa |
6398258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 52 - 528
Target Start/End: Original strand, 6397390 - 6397865
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
|||||||| |||||||||||||||||||| || || || ||||| || ||| ||||| ||||||||||| ||||| || ||| ||| ||| ||||| |
|
|
| T |
6397390 |
atatctaacatatggacgccaaagaaaattatcgacagttgagtctcatgccaacttaatattgtcaattttaaaggcctgaaccttataccacctaaaa |
6397489 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagag |
251 |
Q |
| |
|
|||||||||||| || | |||||||| ||||| | | || | | ||||||||| |||| |||||| ||||||||||||||| |||||| |||||| |
|
|
| T |
6397490 |
aataaagggtctatgtgggtaatcaacataggttgtgaacgcaaatgtgtgaacctcttccacgcccaaacttgaaccaagtaaaaaggtgatagaagag |
6397589 |
T |
|
| Q |
252 |
taacttctaaaggatatctatcaccaccaaca-gataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaa |
350 |
Q |
| |
|
||| ||| | | || || ||||| |||||||| |||| ||| |||||||||| ||| ||||||||||| | |||||||||||||||| |||| |||| |
|
|
| T |
6397590 |
taaattcaacatgaaatttatcatcaccaacaagata-tttcgacaaatcaataattgttttcttaaataaagataaatccttatatatgatagccaaaa |
6397688 |
T |
|
| Q |
351 |
cagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaa--agaacttttcaccaacatgcattttctaggaaaaacaaaa |
448 |
Q |
| |
|
||| |||||||||||||| | |||| |||||||||||| || | ||||| || ||| | |||||||||| ||| ||| ||||||| || || |
|
|
| T |
6397689 |
cagatggtgccaaagcaattggattttctctagcaagattaacattaatagaaagcaaacaaaacttttcac---catttttttaggaggaaaagcacaa |
6397785 |
T |
|
| Q |
449 |
attgataaccaagcaacaatgaatgcttcgtgttcaacttcactacctttatccatgaaaacatccatccataatgatat |
528 |
Q |
| |
|
||||| ||||| | | ||| ||| ||||| ||||||| ||||||||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
6397786 |
attgacaaccaggtagcaaggaaggcttcatgttcaatttcactacctttatcgatgaacatatccatccataatgatat |
6397865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 51 - 422
Target Start/End: Complemental strand, 12497673 - 12497303
Alignment:
| Q |
51 |
catatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaa |
150 |
Q |
| |
|
||||||| | ||||||||| ||||||||||||||| || || ||||| | |||||||||| |||||| |||||| | ||| ||||||| || || |
|
|
| T |
12497673 |
catatctgacatatggacgttaaagaaaatcattgacagttgagcctaatgcacacttaacattgccaattttcaaggccagaaccttatgccacctcaa |
12497574 |
T |
|
| Q |
151 |
caataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaaga |
250 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||| ||||| |||||| || ||||||||| ||||||| |||||||||||||| ||||| ||| | |
|
|
| T |
12497573 |
caataaatgttctatgtggttgatcaacatgagttgtggttgcaagtttgcgagcctctccca-acccaaacatgaaccaagtaaaaaggtgagagaaaa |
12497475 |
T |
|
| Q |
251 |
gtaacttctaaaggatatctatcaccaccaaca-gataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaa |
349 |
Q |
| |
|
|||| ||| | || | || ||| | |||||| | ||| |||||||| ||||| ||| ||||||||||| | ||||||| |||| ||||||||| ||| |
|
|
| T |
12497474 |
gtaaattcaacagaaaatatattatcaccaataagatg-ttttgacagatcaataattgttttcttaaataaagttaaatcgttatttatgctagccaaa |
12497376 |
T |
|
| Q |
350 |
acagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcacca |
422 |
Q |
| |
|
||||| || | ||||| ||| ||||| ||||||||||| ||||||||||| ||||||| ||||| |||||| |
|
|
| T |
12497375 |
acagctggcggcaaagtaatttgatttcttctagcaagattaatagcaatagaaaacaaataacttatcacca |
12497303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 51 - 422
Target Start/End: Complemental strand, 12521538 - 12521168
Alignment:
| Q |
51 |
catatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaa |
150 |
Q |
| |
|
||||||| | ||||||||| ||||||||||||||| || || ||||| | |||||||||| |||||| |||||| | ||| ||||||| || || |
|
|
| T |
12521538 |
catatctgacatatggacgttaaagaaaatcattgacagttgagcctaatgcacacttaacattgccaattttcaaggccagaaccttatgccacctcaa |
12521439 |
T |
|
| Q |
151 |
caataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaaga |
250 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||| ||||| |||||| || ||||||||| ||||||| |||||||||||||| ||||| ||| | |
|
|
| T |
12521438 |
caataaatgttctatgtggttgatcaacatgagttgtggttgcaagtttgcgagcctctccca-acccaaacatgaaccaagtaaaaaggtgagagaaaa |
12521340 |
T |
|
| Q |
251 |
gtaacttctaaaggatatctatcaccaccaaca-gataattttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaa |
349 |
Q |
| |
|
|||| ||| | || | || ||| | |||||| | ||| |||||||| ||||| ||| ||||||||||| | ||||||| |||| ||||||||| ||| |
|
|
| T |
12521339 |
gtaaattcaacagaaaatatattatcaccaataagatg-ttttgacagatcaataattgttttcttaaataaagttaaatcgttatttatgctagccaaa |
12521241 |
T |
|
| Q |
350 |
acagccggtgccaaagcaatagaatttcctctagcaagatgaatagcaataggaaacaaagaacttttcacca |
422 |
Q |
| |
|
||||| || | ||||| ||| ||||| ||||||||||| ||||||||||| ||||||| ||||| |||||| |
|
|
| T |
12521240 |
acagctggcggcaaagtaatttgatttcttctagcaagattaatagcaatagaaaacaaataacttatcacca |
12521168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 52 - 283
Target Start/End: Original strand, 12579742 - 12579972
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| | | |||||||| | | ||||||||||||||||| |||||| || ||| ||| | | |||| | |
|
|
| T |
12579742 |
atatctagcatatggacgtcaaagaaaatcattaacacttgagtctaatgcaaacttaacattgtcaatttgcaaggcctgaaccttattcaacctaagc |
12579841 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagag |
251 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| || ||||| ||||| |||||||||||| | ||||| || | |||||||||| |||||| |||||| |
|
|
| T |
12579842 |
aataaagggtctatgcggttgatcaatatggg-tgtggttgatagtttgtgaacctctcccgtatccaaacttaagccaagtaaaaaggtgatggaagag |
12579940 |
T |
|
| Q |
252 |
taacttctaaaggatatctatcaccaccaaca |
283 |
Q |
| |
|
||| || | ||||||| ||||| |||||||| |
|
|
| T |
12579941 |
taaattaaacaggatatatatcatcaccaaca |
12579972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 52 - 283
Target Start/End: Original strand, 12495646 - 12495876
Alignment:
| Q |
52 |
atatctaaaatatggacgccaaagaaaatcattgatagccaagtctaattccagcttaacattgtcaatttccaaggcttgtaccctatgccatctaaac |
151 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | |||||||| | | || |||||||||||||| |||||| || ||| ||| | | |||| | |
|
|
| T |
12495646 |
atatctagcatatggacgccaaagaaaatcattgacacttgagtctaatgcaaactgaacattgtcaatttgcaaggcctgaaccttattcaacctaagc |
12495745 |
T |
|
| Q |
152 |
aataaagggtctccacggttgatcaacatgggttgcggttgtaagtttttgaacctctcccacacccaaatttgaaccaagtaaaacggtgattgaagag |
251 |
Q |
| |
|
|||||||||||| ||||||| |||||||| || ||||| ||||| |||||||||||| | ||||| || | |||| ||||| |||||| ||||| |
|
|
| T |
12495746 |
aataaagggtctatgtggttgatgaacatggg-tgtggttgatagtttgtgaacctctcccgtatccaaacttaagccaaataaaaaggtgatataagag |
12495844 |
T |
|
| Q |
252 |
taacttctaaaggatatctatcaccaccaaca |
283 |
Q |
| |
|
||| || | ||||||| ||||| |||||||| |
|
|
| T |
12495845 |
taaattaaataggatatatatcatcaccaaca |
12495876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 288 - 485
Target Start/End: Complemental strand, 12581620 - 12581426
Alignment:
| Q |
288 |
attttgacaaatcaacaatggttttcttaaacacgcttaaatccttatatatgctagctaaaacagccggtgccaaagcaatagaatttcctctagcaag |
387 |
Q |
| |
|
||||||||| ||||| ||| ||||||||||| | |||||||||||| ||||||||| ||||||| | | ||||| ||| ||||| ||||||||| |
|
|
| T |
12581620 |
attttgacagatcaataattgttttcttaaataaagttaaatccttatttatgctagccaaaacagtttgcggcaaagtaattcgatttcttctagcaag |
12581521 |
T |
|
| Q |
388 |
atgaatagcaataggaaacaaagaacttttcaccaacatgcattttctaggaaaaacaaaaattgataaccaagcaacaatgaatgcttcgtgttcaa |
485 |
Q |
| |
|
|| ||||||||||| ||||||| |||||||||| ||| | | | |||||||||||||||||| ||||||| | ||| ||| ||||| ||||||| |
|
|
| T |
12581520 |
attaatagcaatagaaaacaaataacttttcac---catttttctacgaggaaaaacaaaaattgacaaccaagtagcaaggaaggcttcatgttcaa |
12581426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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