View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6135_low_10 (Length: 316)
Name: NF6135_low_10
Description: NF6135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6135_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 3 - 316
Target Start/End: Complemental strand, 28062876 - 28062560
Alignment:
| Q |
3 |
ggacatacataaacaacatgaatgcaaaattaaaaa----atatagaaagaaactcaaatattatatgctacaagatcatttaatctatgatcaatattg |
98 |
Q |
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| T |
28062876 |
ggacatatataaacaacatgaa-acaatattaaaaaaaatatatagaaaaaaactcaaatattatatgctaaaagattatttagtctatgatcaatattg |
28062778 |
T |
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| Q |
99 |
tatcattataattacatacctcaagttgaagagggcaccaatggttgctaactctccactccttaatataagctctcttaaagatagggaaaatataaat |
198 |
Q |
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| T |
28062777 |
tatcattgtaattacatacctcaagttgaagagggcaccaatggttgctaactctccactcttcaatataagctctcttaaagatagagaaaatataaat |
28062678 |
T |
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| Q |
199 |
taatatgagatggacatgcataatatgaatacaaattagagaaatgagtgagaaccttcgtttgatttggtgacccttgacattcttatgcttatgagag |
298 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28062677 |
taatatgagatggacatgcatgatatgaatacaaattagagaaatgagtgagaaccttcgtttgatttggtgacccttgacattcttatgcttatgagag |
28062578 |
T |
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| Q |
299 |
agatgaaactgaggaaaa |
316 |
Q |
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|||||||||||||||||| |
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| T |
28062577 |
agatgaaactgaggaaaa |
28062560 |
T |
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