View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6135_low_19 (Length: 220)
Name: NF6135_low_19
Description: NF6135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6135_low_19 |
 | |
|
| [»] scaffold1469 (1 HSPs) |
| |
|
| [»] scaffold0131 (1 HSPs) |
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|
| [»] scaffold0053 (1 HSPs) |
| | |
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| [»] scaffold0029 (2 HSPs) |
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| [»] scaffold0072 (1 HSPs) |
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|
| [»] scaffold0384 (1 HSPs) |
| | |
|
| [»] scaffold0023 (1 HSPs) |
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| [»] scaffold0348 (1 HSPs) |
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| [»] scaffold1318 (1 HSPs) |
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| [»] scaffold0099 (1 HSPs) |
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| [»] scaffold0127 (1 HSPs) |
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| [»] scaffold0609 (1 HSPs) |
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| [»] scaffold0815 (1 HSPs) |
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| [»] scaffold0222 (1 HSPs) |
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| [»] scaffold0453 (1 HSPs) |
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| [»] scaffold0261 (1 HSPs) |
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| [»] scaffold0034 (1 HSPs) |
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| [»] scaffold0004 (1 HSPs) |
| | |
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| [»] scaffold0001 (1 HSPs) |
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Alignment Details
Target: scaffold1469 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold1469
Description:
Target: scaffold1469; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 1389 - 1177
Alignment:
| Q |
8 |
ctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttgaagaaaa |
107 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1389 |
ctttcaatagtgttaatatatgctttctgaaaattaaacaatttaactgttcttaaggtaaaattgggaaaattaggtctaatgatgattttgaagaaaa |
1290 |
T |
|
| Q |
108 |
tgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaatagcatgtta |
207 |
Q |
| |
|
||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1289 |
tgcgtaagattcaggtttacaatgttataattgatgattagtatgatttcctaatctgtattgttgttgttgatcataattggatgaaaatagcatgtta |
1190 |
T |
|
| Q |
208 |
tgtatgaatttgg |
220 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
1189 |
tgtgtgaatttgg |
1177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 20773010 - 20772815
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20773010 |
ggattatctttcaatagttataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg |
20772911 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaa |
196 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||||||| |
|
|
| T |
20772910 |
aagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctactctatattgttgatgttgatcataattggatgaaa |
20772815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28889351 - 28889571
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa-ttgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
28889351 |
ggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgatttt |
28889450 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaata |
199 |
Q |
| |
|
||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
28889451 |
gaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattggatgaaaaga |
28889550 |
T |
|
| Q |
200 |
gcatgttatgtatgaatttgg |
220 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
28889551 |
gcatgttatgtatgaatttgg |
28889571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28896055 - 28896275
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa-ttgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
28896055 |
ggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgatttt |
28896154 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaata |
199 |
Q |
| |
|
||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
28896155 |
gaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattggatgaaaaga |
28896254 |
T |
|
| Q |
200 |
gcatgttatgtatgaatttgg |
220 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
28896255 |
gcatgttatgtatgaatttgg |
28896275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28909303 - 28909523
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa-ttgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
28909303 |
ggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgatttt |
28909402 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaata |
199 |
Q |
| |
|
||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
28909403 |
gaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattggatgaaaaga |
28909502 |
T |
|
| Q |
200 |
gcatgttatgtatgaatttgg |
220 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
28909503 |
gcatgttatgtatgaatttgg |
28909523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28924881 - 28925101
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa-ttgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
28924881 |
ggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgatttt |
28924980 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaata |
199 |
Q |
| |
|
||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
28924981 |
gaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattggatgaaaaga |
28925080 |
T |
|
| Q |
200 |
gcatgttatgtatgaatttgg |
220 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
28925081 |
gcatgttatgtatgaatttgg |
28925101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28945698 - 28945918
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa-ttgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
28945698 |
ggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgatttt |
28945797 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaata |
199 |
Q |
| |
|
||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
28945798 |
gaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattggatgaaaaga |
28945897 |
T |
|
| Q |
200 |
gcatgttatgtatgaatttgg |
220 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
28945898 |
gcatgttatgtatgaatttgg |
28945918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 20781785 - 20781590
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20781785 |
ggattatctttcaataattataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg |
20781686 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaa |
196 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||| ||||| || |||||||||||||||||||||| |
|
|
| T |
20781685 |
aagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattattatgatttcctactctatattgttgatgttgatcataattggatgaaa |
20781590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 20820257 - 20820040
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
20820257 |
ggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaattgg-aaaattagggttaatgatgattttg |
20820159 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaatag |
200 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||| ||| |||||||||||||||||| |||||| |
|
|
| T |
20820158 |
aagagaatgcataagattcaggtttataatgttgtatttgatgatgagtatga-tccctaattagtattgttgtagttgatcataattggatgcaaatag |
20820060 |
T |
|
| Q |
201 |
catgttatgtatgaatttgg |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
20820059 |
catgttatgtatgaatttgg |
20820040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 20827357 - 20827140
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
20827357 |
ggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaattgg-aaaattagggttaatgatgattttg |
20827259 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaatag |
200 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||| ||| |||||||||||||||||| |||||| |
|
|
| T |
20827258 |
aagagaatgcataagattcaggtttataatgttgtatttgatgatgagtatga-tccctaattagtattgttgtagttgatcataattggatgcaaatag |
20827160 |
T |
|
| Q |
201 |
catgttatgtatgaatttgg |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
20827159 |
catgttatgtatgaatttgg |
20827140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 24929942 - 24930130
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
24929942 |
ggattatctttcaatagttctaatatatgatttctaaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattct |
24930041 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataatt |
188 |
Q |
| |
|
|||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || || | |||||||||||| |
|
|
| T |
24930042 |
gaaggaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctaatctataatgttgatattgatcataatt |
24930130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 67 - 220
Target Start/End: Original strand, 28931061 - 28931215
Alignment:
| Q |
67 |
aaaattgggaaaattagggttaatgatgatttt-gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctg |
165 |
Q |
| |
|
|||||||||||||||||| || |||||| |||| |||||||||| |||| |||||||||||| | ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28931061 |
aaaattgggaaaattaggtttgatgatggtttttgaagaaaatgggtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctg |
28931160 |
T |
|
| Q |
166 |
tattgctgttgttgatcataattggatgaaaatagcatgttatgtatgaatttgg |
220 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28931161 |
tatcgctgttgttgatcataattggatgaaaagagcatgttatgtatgaatttgg |
28931215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19236941 - 19236740
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
19236941 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
19236842 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||| ||||||||||| ||||||| ||||| | |||||||| ||| |||||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
19236841 |
aaagaaaaggtataaggatcaggtttatattgttgtactttga-gtttagtatgtgttcttaatctatgttgttgatgctgatcgtaattggaatgaaaa |
19236743 |
T |
|
| Q |
198 |
tag |
200 |
Q |
| |
|
||| |
|
|
| T |
19236742 |
tag |
19236740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 22461197 - 22460977
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
22461197 |
ggattatctttcaatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgatttg |
22461098 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||| ||||||||||| ||| ||| ||||||| |||||||| |||| || ||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
22461097 |
aaagaaaaggtataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatgttgttgatgctgatcgtaattggaatgaaaa |
22460998 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
22460997 |
tagaatatgatgaatgaattt |
22460977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 22467821 - 22467601
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
22467821 |
ggattatctttcaatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgatttg |
22467722 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||| ||||||||||| ||| ||| ||||||| |||||||| |||| || ||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
22467721 |
aaagaaaaggtataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatgttgttgatgctgatcgtaattggaatgaaaa |
22467622 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
22467621 |
tagaatatgatgaatgaattt |
22467601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 18407961 - 18408059
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaattagggttaatgatgattttga |
101 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||| ||| ||||||| ||||||| || ||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
18407961 |
tatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagggttgatgctgattttga |
18408058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 23111217 - 23111315
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaattagggttaatgatgattttga |
101 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| || ||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
23111217 |
tatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagggttgatgctgattttga |
23111314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 9099085 - 9099273
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
9099085 |
ggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattct |
9099184 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataatt |
188 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||| |
|
|
| T |
9099185 |
gaagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctaatctatattgttgatattgatcataatt |
9099273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 20007960 - 20008181
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
20007960 |
ggatcatctttcaatagtcataatatataatttatgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgatttt |
20008059 |
T |
|
| Q |
100 |
g-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaa |
196 |
Q |
| |
|
| ||||||| | |||| ||||||||||| ||||||| ||||||| |||||||| |||| |||||| ||||| || || ||||| ||||||| |||||| |
|
|
| T |
20008060 |
gaaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatattgttgatgctgatcgtaattggaatgaaa |
20008159 |
T |
|
| Q |
197 |
atagcatgttatgtatgaattt |
218 |
Q |
| |
|
|||| || | ||| |||||||| |
|
|
| T |
20008160 |
atagaatatgatgaatgaattt |
20008181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 21364496 - 21364688
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||| |||| || | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||| ||||| |
|
|
| T |
21364496 |
ggattatccttcagtaatgataatatatgatttctgaaaattaagcaatttaactgtt-ttatggtaaaattgggaaa-ttagggttaatggcatttttg |
21364593 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaa |
195 |
Q |
| |
|
|||||||| |||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
21364594 |
aagaaaatatgtaagacttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattgttgatgttgatcataattggatgaa |
21364688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 23968478 - 23968670
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||| |||| || | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||| ||||| |
|
|
| T |
23968478 |
ggattatccttcagtaatgataatatatgatttctgaaaattaagcaatttaactgtt-ttatggtaaaattgggaaa-ttagggttaatggcatttttg |
23968575 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaa |
195 |
Q |
| |
|
|||||||| |||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
23968576 |
aagaaaatatgtaagacttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattgttgatgttgatcataattggatgaa |
23968670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 29097790 - 29097719
Alignment:
| Q |
117 |
ttcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataatt |
188 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| || || || | |||||||||||| |
|
|
| T |
29097790 |
ttcaggtttatactgttgtatttgatgattagtatgatttcctaatctataatgttgatattgatcataatt |
29097719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 31252463 - 31252390
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattg |
73 |
Q |
| |
|
|||||||||| ||| | ||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||| |
|
|
| T |
31252463 |
gattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaattg |
31252390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 19235082 - 19235270
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
19235082 |
ggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattct |
19235181 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataatt |
188 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||| |
|
|
| T |
19235182 |
gaagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctaatctatattgttgatattgatcataatt |
19235270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12033458 - 12033678
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
12033458 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaattaagggttaatgatgattttg |
12033557 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgga-tgaaaa |
197 |
Q |
| |
|
||||||| | ||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||| | ||| || |||||||| |||||| | |||||| |
|
|
| T |
12033558 |
aaagaaaaggtataagaatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgttgatcgtaattgaattgaaaa |
12033657 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
12033658 |
tagaatatgatggatgaattt |
12033678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 17131773 - 17131553
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
17131773 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
17131674 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||| ||||||||||||||||||| ||||||| ||||||||||||| |||||| | ||| || ||||||| ||||||| ||||||| |
|
|
| T |
17131673 |
aaagaaaaggtataaggatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgttgattgtaattggaatgaaaa |
17131574 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
17131573 |
tagaatatgatggatgaattt |
17131553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14865887 - 14865723
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
14865887 |
ggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaattgggaaaataatggttaatgatgattttg |
14865788 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatc |
163 |
Q |
| |
|
||||||| | |||||| |||||||||||||||||| || |||||||||||||||||| ||||| |
|
|
| T |
14865787 |
aaagaaaaggtgtaagaagcaggtttataatgttgtacttggatgattagtatgatttcttaatc |
14865723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13302255 - 13302348
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaattagggttaatgatga |
95 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||||| || | ||||||| ||| ||||| |||| || |||||||| ||||||| |
|
|
| T |
13302255 |
gattatctttcaataatcataatatgtaatttctgaaaattaatcaaatgcattgttcttgaagataaaa-tggggaatttagggttgatgatga |
13302348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 51301629 - 51301572
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttc |
59 |
Q |
| |
|
||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
51301629 |
gattatcttccaataatcataatatgtaatttctgaaaattaatcaattgaattgttc |
51301572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13323802 - 13323896
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaattagggttaatgatga |
95 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||| |||| | ||||||| ||| |||||||||| || |||||||| ||||||| |
|
|
| T |
13323802 |
gattatctttcaataatcataatatgtaatttctgaaaattaatcaaattagattgttcttgaagataaaattggg-aatttagggttgatgatga |
13323896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13312911 - 13313004
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaattagggttaatgatga |
95 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| |||||||||||||| || | ||||||| ||| |||||| ||| || |||||||| ||||||| |
|
|
| T |
13312911 |
gattatctttcaataatcataatatgtaatttttgaaaattaatcaaatggattgttcttgaagataaaataggg-aatttagggttgatgatga |
13313004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 1038 - 819
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||| |||| |||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
1038 |
ggatcatctctcaatagtgataatatatgatttctgaaaattaagcaatttaactgttcttatggtaaaattgggaaaattagggttaatggcgattttg |
939 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaaaatag |
200 |
Q |
| |
|
||||||||| |||||||| |||||||||| ||||| |||||||||||||| || || | |||| || || ||||||||||||||||||||||||||||| |
|
|
| T |
938 |
aagaaaatgtgtaagatttaggtttataaagttgtgtttgatgattagtaagagtttccgatctataatgttgttgttgatcataattggatgaaaatag |
839 |
T |
|
| Q |
201 |
catgttatgtatgaatttgg |
220 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
838 |
catgttatgtatgaatttgg |
819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 79504 - 79668
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
79504 |
ggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttg |
79603 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgtatttg-atgattagtatgatttcctaatc |
163 |
Q |
| |
|
||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
79604 |
aaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatc |
79668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21710859 - 21710640
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||| |
|
|
| T |
21710859 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggtttaagatgattttg |
21710760 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaat |
198 |
Q |
| |
|
||||||| | |||| |||||||||||||||| || |||||| ||||||||||| | |||||| | ||| || |||||||||||||||| |||||||| |
|
|
| T |
21710759 |
aaagaaaaagtataaggatcaggtttataatgttatacttgatgtttagtatgattccttaatctatgttgttgatgttgatcataattggaatgaaaat |
21710660 |
T |
|
| Q |
199 |
agcatgttatgtatgaattt |
218 |
Q |
| |
|
|| || | ||| |||||||| |
|
|
| T |
21710659 |
agaatatgatggatgaattt |
21710640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 20851146 - 20851366
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
20851146 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
20851245 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||| ||||||||||| ||||||| ||||||| ||||||||||||| |||||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
20851246 |
aaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgctgatcgtaattggaatgaaaa |
20851345 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
20851346 |
tagaatatgatgaatgaattt |
20851366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 20857773 - 20857993
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
20857773 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
20857872 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||| ||||||||||| ||||||| ||||||| |||||||| |||| |||||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
20857873 |
aaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgttgttgatgctgatcgtaattggaatgaaaa |
20857972 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
20857973 |
tagaatatgatgaatgaattt |
20857993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21706317 - 21706097
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
21706317 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
21706218 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||| ||||||||||| ||||||| ||||||| |||||||| |||| |||||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
21706217 |
aaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgttgttgatgctgatcgtaattggaatgaaaa |
21706118 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
21706117 |
tagaatatgatgaatgaattt |
21706097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 18712837 - 18712780
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt |
61 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| |
|
|
| T |
18712837 |
tatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt |
18712780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 117; Significance: 9e-60; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16146844 - 16147008
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
16146844 |
ggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaatttggaaaataagggttaatgatgattttg |
16146943 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgtatttg-atgattagtatgatttcctaatc |
163 |
Q |
| |
|
||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
16146944 |
aaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatc |
16147008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 14486698 - 14486601
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaattagggttaatgatgattttga |
101 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
14486698 |
tatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaaattgggaata-tagggttgatgatgattttga |
14486601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27906307 - 27906263
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaat |
45 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
27906307 |
ggattatctttcaatgatcataatgtataatttctgaaaattaat |
27906263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 24320684 - 24320904
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
24320684 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
24320783 |
T |
|
| Q |
101 |
aa-gaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
|| ||||| | || | ||||||||||| ||||||| ||||||| ||||||||||||| |||||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
24320784 |
aaagaaaaggtatagggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgctgatcgtaattggaatgaaaa |
24320883 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
24320884 |
tagaatatgatgaatgaattt |
24320904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 29643400 - 29643446
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatcaa |
48 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
29643400 |
gattatctttcaataatcataatatgtaatttctgaaaattaatcaa |
29643446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 18614310 - 18614240
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattg |
73 |
Q |
| |
|
||||| |||||| |||| |||||||||||||||||||| || |||||||| ||||||| ||| |||||||| |
|
|
| T |
18614310 |
tatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattg |
18614240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 23482070 - 23482168
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaattagggttaatgatgattttga |
101 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| || ||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
23482070 |
tatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagggttgatgctgattttga |
23482167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 113; Significance: 2e-57; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16091116 - 16090952
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16091116 |
ggattatctttcaatagtcataatatgtaatttctgaaagttaatcaattaaactgttcctaaggtaaaattgggaaaataagggttaatgatgattttg |
16091017 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgtatttg-atgattagtatgatttcctaatc |
163 |
Q |
| |
|
||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
16091016 |
aaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatc |
16090952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 29181123 - 29181287
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
29181123 |
ggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactattcttaaggtaaaatttggaaaataagggttaatgatgattttg |
29181222 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgtatttg-atgattagtatgatttcctaatc |
163 |
Q |
| |
|
||||||| | |||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
29181223 |
aaagaaaaggtgtaagaatcaggcttataatgttgtatttgaatgattagtatgatttcttaatc |
29181287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20906475 - 20906693
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||| |
|
|
| T |
20906475 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactattcttaaggtaaaattggg-aattaagggttaatgatgattttg |
20906573 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattg-gatgaaaa |
197 |
Q |
| |
|
||||||| | ||||| ||| ||||||||||||||| ||||||| ||||||||||||| |||||| | ||| || |||||||| |||||| ||||||| |
|
|
| T |
20906574 |
aaagaaaaggtataagaatcaagtttataatgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgttgatcgtaattgaaatgaaaa |
20906673 |
T |
|
| Q |
198 |
tagcatgttatgtatgaatt |
217 |
Q |
| |
|
||| || | ||| ||||||| |
|
|
| T |
20906674 |
tagaatatgatggatgaatt |
20906693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 2465402 - 2465208
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||| ||| ||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| | || ||||||||||||||| |||||| |
|
|
| T |
2465402 |
ggatcatccttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaattgggaaattagggttaatggcaattttg |
2465303 |
T |
|
| Q |
101 |
aagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaa |
195 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
2465302 |
aagaaaatgtgtaagatttaggtttataatgttatatttgatgattaatatgatttcctactctgtattgttgatgttgatcataattggatgaa |
2465208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 3857387 - 3857574
Alignment:
| Q |
10 |
ttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa---ttgggaaaattagggttaatgatgattttgaagaaa |
106 |
Q |
| |
|
||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| |||||||| |||||||||||| |||||||||||| |
|
|
| T |
3857387 |
ttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattgggaaa-ttagggttaatggcaattttgaagaaa |
3857485 |
T |
|
| Q |
107 |
atgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaa |
195 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||| ||||||||||||| |
|
|
| T |
3857486 |
atgtgtaagatttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattgttgatgttgattataattggatgaa |
3857574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2971295 - 2971209
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggtt |
87 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
2971295 |
ggattatctttcaatagtcataatttataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaagataagggtt |
2971209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 2966925 - 2966786
Alignment:
| Q |
82 |
agggttaatgatgattttgaa-gaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttg |
179 |
Q |
| |
|
||||||||||||| ||||||| ||||| | ||||| |||||||| |||||||||| ||||||||||||||||||||| ||||| | ||| || ||||| |
|
|
| T |
2966925 |
agggttaatgatgtttttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgttg |
2966826 |
T |
|
| Q |
180 |
atcataattgg-atgaaaatagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| ||||||| |||||||||| || | ||| |||||||| |
|
|
| T |
2966825 |
atcgtaattggaatgaaaatagaatatgatggatgaattt |
2966786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 11382888 - 11382925
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaatt |
42 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
11382888 |
tatctctcaataatcataatatataatttctgaaaatt |
11382925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 11389365 - 11389402
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaatt |
42 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
11389365 |
tatctctcaataatcataatatataatttctgaaaatt |
11389402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 109; Significance: 5e-55; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 25180943 - 25181163
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
25180943 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
25181042 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | || ||||||||||| | ||||| ||||||| ||||||||||||| |||||| | ||| || |||||||| ||||||| ||||||| |
|
|
| T |
25181043 |
aaagaaaaggtatattgatcaggtttatatttttgtactttgatgtttagtatgatttcttaatctatgttgttgatgttgatcgtaattggaatgaaaa |
25181142 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
25181143 |
tagaatatgatggatgaattt |
25181163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10618 - 10398
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
10618 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaattgttcttaaggtaaaattgggaaatttagggttaaggatgattttg |
10519 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgta-tttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | || | | ||||||||| ||||||| ||||||| ||||||||||||| |||||| | ||| || || ||||| ||||||| ||||||| |
|
|
| T |
10518 |
aaagaaaaggtatagggataaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgctgatcgtaattggaatgaaaa |
10419 |
T |
|
| Q |
198 |
tagcatgttatgtatgaattt |
218 |
Q |
| |
|
||| || | ||| |||||||| |
|
|
| T |
10418 |
tagaatatgatggatgaattt |
10398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 23265180 - 23265123
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt |
61 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| |
|
|
| T |
23265180 |
tatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt |
23265123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 23280248 - 23280191
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt |
61 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| |
|
|
| T |
23280248 |
tatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt |
23280191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26885223 - 26885179
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatc |
46 |
Q |
| |
|
|||||||||||||||| || |||| ||||||||||||||||||||| |
|
|
| T |
26885223 |
ggattatctttcaataatc-taatgtataatttctgaaaattaatc |
26885179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 91216 - 91412
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa---ttgggaaaattagggttaatgatgatt |
97 |
Q |
| |
|
|||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| |||||||| |||||||||||| ||| |
|
|
| T |
91216 |
ggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattgggaaa-ttagggttaatggcaatt |
91314 |
T |
|
| Q |
98 |
ttgaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaa |
195 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
91315 |
ttgaagaaaatgtgtaagatttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattggtgatgttgatcataattggatgaa |
91412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 96942 - 97138
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa---ttgggaaaattagggttaatgatgatt |
97 |
Q |
| |
|
|||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| |||||||| |||||||||||| ||| |
|
|
| T |
96942 |
ggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattgggaaa-ttagggttaatggcaatt |
97040 |
T |
|
| Q |
98 |
ttgaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattggatgaa |
195 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
97041 |
ttgaagaaaatgtgtaagatttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattggtgatgttgatcataattggatgaa |
97138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 49984 - 50149
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
49984 |
ggattatctttcaatagtcataatatgtaatttctaaaaattaatcaattaaactgttcttaaggtaaaaattgggaaaataagggttaatgatgatttt |
50083 |
T |
|
| Q |
100 |
g-aagaaaatgcgtaagattcaggtttataatgttgtatttg-atgattagtatgatttcctaatc |
163 |
Q |
| |
|
| ||||||| | |||||| |||||||||||||||| |||||| | ||||||||||||||| ||||| |
|
|
| T |
50084 |
gaaagaaaaggtgtaagaatcaggtttataatgttatatttgaaagattagtatgatttcttaatc |
50149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0384 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0384
Description:
Target: scaffold0384; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 16078 - 16266
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| ||||| ||||| | |||| |||||||||||||||||||| |
|
|
| T |
16078 |
ggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgtttttaagataaaaattggaat-ttagggttaatgatgatttt |
16176 |
T |
|
| Q |
100 |
gaagaaaatgcgtaagattcaggtttataatgttgtatttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattg |
189 |
Q |
| |
|
|||||||||| | |||| ||||||| || |||||||||||||||||||||||||||| ||||||| ||||| | | ||||||||||||| |
|
|
| T |
16177 |
gaagaaaatgtgcaagaatcaggttcatgatgttgtatttgatgattagtatgattttctaatctatattgttcatattgatcataattg |
16266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 135478 - 135261
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || | ||||||||||||||||||| |
|
|
| T |
135478 |
gattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaggtaaaattgag-aattaagggttaatgatgattttg |
135380 |
T |
|
| Q |
101 |
-aagaaaatgcgtaagattcaggtttataatgttgt-atttgatgattagtatgatttcctaatctgtattgctgttgttgatcataattgg-atgaaaa |
197 |
Q |
| |
|
||||||| | |||||| |||||||||| |||||| |||||||| ||||||||||||| |||||| | ||| || | |||||| |||||| ||||||| |
|
|
| T |
135379 |
aaagaaaaggtgtaagaatcaggtttattgtgttgtaatttgatg-ttagtatgatttcttaatctatgttgttgatcgtgatcaaaattggaatgaaaa |
135281 |
T |
|
| Q |
198 |
tagcatgttatgtatgaatt |
217 |
Q |
| |
|
||| || | ||| ||||||| |
|
|
| T |
135280 |
tagaatatgatggatgaatt |
135261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0348 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0348
Description:
Target: scaffold0348; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9377 - 9219
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || | |||||||||||||||||| |
|
|
| T |
9377 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaagtaaaattggg-aattaagggttaatgatgatttt |
9279 |
T |
|
| Q |
100 |
g-aagaaaatgcgtaagattcaggtttataatgttgt-atttgatgattagtatgatttc |
157 |
Q |
| |
|
| ||||||| | |||||| | |||||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
9278 |
gaaagaaaaggtgtaagaattaggtttattgtgttgtaatttgatgtttagtatgatttc |
9219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1318 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1318
Description:
Target: scaffold1318; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 1926 - 2062
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaattagggttaatgatgatttt |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || | |||||||||||||||||| |
|
|
| T |
1926 |
ggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttgaaagtaaaattggg-aattaagggttaatgatgatttt |
2024 |
T |
|
| Q |
100 |
g-aagaaaatgcgtaagattcaggtttataatgttgta |
136 |
Q |
| |
|
| ||||||| | |||||| | |||||||| ||||||| |
|
|
| T |
2025 |
gaaagaaaaggtgtaagaattaggtttattgtgttgta |
2062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0099 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0099
Description:
Target: scaffold0099; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13007 - 12832
Alignment:
| Q |
1 |
ggattatcttt-caatagtcataatatataatttctgaaaa-ttaatcaa---ttgaactgttcttaa-ggtaaaatt--gggaaaattagggttaatg- |
91 |
Q |
| |
|
||||||||||| ||||||| |||||||| |||||| |||| |||||| | || |||||||||||| ||||||| | |||||| |||||||||||| |
|
|
| T |
13007 |
ggattatctttacaatagttctaatatatgatttctaaaaaattaatctaaattttaactgttcttaaaggtaaaaattggggaaatttagggttaatgt |
12908 |
T |
|
| Q |
92 |
atgattttgaagaaaatgcgt-aagattc-aggtttataatgttgtatttg-atgattagtatgatttcctaatct |
164 |
Q |
| |
|
|||||| ||||| ||||| || |||| || ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12907 |
atgattctgaaggaaatgtgttaagaatctaggtttataatgttgtatttgtatgattagtatgatttcctaatct |
12832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 10279 - 10180
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaag-gtaaaattgggaaaattagggttaatgatgattttg |
100 |
Q |
| |
|
||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||| | || |||||||||| |||||||||| ||| | |||||| |
|
|
| T |
10279 |
gattatcttccaataatcataatatgtaatttctgaaaattaatcaattgaattgttcatgagaataaaattggg--aattagggttgatgctaattttg |
10182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0609 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0609
Description:
Target: scaffold0609; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5871 - 5945
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattg |
73 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||| |
|
|
| T |
5871 |
ggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaattg |
5945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0815 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0815
Description:
Target: scaffold0815; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 1441 - 1388
Alignment:
| Q |
50 |
tgaactgttcttaaggtaaaattgggaaaattagggttaatgatgattttgaag |
103 |
Q |
| |
|
|||| ||||||| || ||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
1441 |
tgaattgttcttgagataaaattggaaaaattagggttaatgctgattttgaag |
1388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 16858 - 16760
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaattagggttaatgatgattttga |
101 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| || ||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
16858 |
tatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagggttgatgctgattttga |
16761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0453 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0453
Description:
Target: scaffold0453; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10564 - 10609
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatc |
46 |
Q |
| |
|
||||||||||||||| || |||| ||||||||||||||||||||| |
|
|
| T |
10564 |
ggattatctttcaatgatcttaatgtataatttctgaaaattaatc |
10609 |
T |
|
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Target: scaffold0261 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0261
Description:
Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23583 - 23628
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatc |
46 |
Q |
| |
|
||||||||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
23583 |
ggattatctttgaatgatcataatgtataatttctgaaaattaatc |
23628 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 73326 - 73281
Alignment:
| Q |
1 |
ggattatctttcaatagtcataatatataatttctgaaaattaatc |
46 |
Q |
| |
|
||||||||||||||| ||||||| |||||||| |||||||||||| |
|
|
| T |
73326 |
ggattatctttcaatgatcataatgtataatttatgaaaattaatc |
73281 |
T |
|
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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 116934 - 116877
Alignment:
| Q |
5 |
tatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt |
61 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| |
|
|
| T |
116934 |
tatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt |
116877 |
T |
|
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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 493043 - 493086
Alignment:
| Q |
2 |
gattatctttcaatagtcataatatataatttctgaaaattaatc |
46 |
Q |
| |
|
||||||||||||||| || |||| ||||||||||||||||||||| |
|
|
| T |
493043 |
gattatctttcaataatc-taatgtataatttctgaaaattaatc |
493086 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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