View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6137_high_3 (Length: 488)

Name: NF6137_high_3
Description: NF6137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6137_high_3
NF6137_high_3
[»] chr5 (37 HSPs)
chr5 (166-358)||(10736861-10737053)
chr5 (155-361)||(4124754-4124961)
chr5 (153-362)||(1103878-1104087)
chr5 (256-364)||(10735758-10735866)
chr5 (187-363)||(13519469-13519649)
chr5 (179-361)||(35047417-35047598)
chr5 (155-273)||(9219262-9219380)
chr5 (280-363)||(35081474-35081557)
chr5 (278-362)||(28702566-28702650)
chr5 (256-363)||(11797546-11797653)
chr5 (280-362)||(4127290-4127372)
chr5 (277-364)||(1102613-1102700)
chr5 (153-246)||(8188113-8188206)
chr5 (256-361)||(41144531-41144636)
chr5 (278-363)||(41143236-41143321)
chr5 (166-246)||(224516-224596)
chr5 (182-362)||(11796566-11796745)
chr5 (3-69)||(224357-224424)
chr5 (171-242)||(5975870-5975941)
chr5 (180-249)||(10978216-10978285)
chr5 (3-57)||(5976052-5976106)
chr5 (175-255)||(1273190-1273270)
chr5 (153-246)||(18695560-18695653)
chr5 (172-298)||(36897998-36898126)
chr5 (303-342)||(31267768-31267807)
chr5 (290-361)||(42642057-42642128)
chr5 (175-255)||(22812321-22812402)
chr5 (302-362)||(8523805-8523865)
chr5 (295-363)||(23334019-23334087)
chr5 (304-347)||(22308860-22308903)
chr5 (295-361)||(23325910-23325976)
chr5 (153-246)||(21389056-21389149)
chr5 (297-338)||(41805852-41805893)
chr5 (178-234)||(326467-326523)
chr5 (182-242)||(9170831-9170891)
chr5 (295-339)||(12374610-12374654)
chr5 (289-345)||(36899026-36899082)
[»] chr7 (36 HSPs)
chr7 (153-364)||(43442673-43442884)
chr7 (169-362)||(10955842-10956035)
chr7 (176-362)||(666723-666909)
chr7 (153-361)||(26146617-26146825)
chr7 (278-360)||(10957189-10957271)
chr7 (153-247)||(17288155-17288249)
chr7 (175-324)||(29589202-29589351)
chr7 (262-365)||(669407-669510)
chr7 (278-363)||(26135637-26135722)
chr7 (153-246)||(28326303-28326396)
chr7 (182-343)||(35296757-35296918)
chr7 (182-361)||(41329409-41329588)
chr7 (153-246)||(41515106-41515199)
chr7 (256-360)||(43441345-43441449)
chr7 (157-323)||(3330728-3330893)
chr7 (153-246)||(45721679-45721772)
chr7 (256-362)||(2414746-2414848)
chr7 (256-324)||(35295734-35295802)
chr7 (153-324)||(32653498-32653668)
chr7 (201-317)||(44376646-44376762)
chr7 (201-317)||(44385513-44385629)
chr7 (292-362)||(8426935-8427005)
chr7 (1-69)||(17288017-17288085)
chr7 (267-364)||(39981312-39981409)
chr7 (256-333)||(44372755-44372832)
chr7 (256-333)||(44381611-44381688)
chr7 (280-363)||(41328215-41328298)
chr7 (302-361)||(44554825-44554884)
chr7 (281-324)||(48312691-48312734)
chr7 (309-347)||(3413544-3413582)
chr7 (278-324)||(15992170-15992216)
chr7 (3-57)||(28326159-28326213)
chr7 (256-333)||(9081419-9081496)
chr7 (153-218)||(30333415-30333480)
chr7 (214-255)||(43931840-43931881)
chr7 (307-347)||(11501192-11501232)
[»] chr8 (46 HSPs)
chr8 (153-362)||(43203190-43203399)
chr8 (153-361)||(31844366-31844574)
chr8 (166-318)||(42793740-42793892)
chr8 (167-364)||(24306049-24306246)
chr8 (153-333)||(24191403-24191582)
chr8 (256-363)||(38697864-38697971)
chr8 (277-360)||(43202095-43202178)
chr8 (256-361)||(31845807-31845912)
chr8 (256-361)||(28291293-28291398)
chr8 (153-246)||(38095-38187)
chr8 (153-246)||(39516410-39516503)
chr8 (182-363)||(9853563-9853744)
chr8 (263-364)||(9854899-9855000)
chr8 (153-242)||(22621047-22621136)
chr8 (1-69)||(38256-38324)
chr8 (173-246)||(7770107-7770180)
chr8 (216-333)||(10667995-10668112)
chr8 (166-319)||(38697196-38697349)
chr8 (178-246)||(7777784-7777852)
chr8 (279-338)||(24305074-24305133)
chr8 (274-361)||(28291396-28291483)
chr8 (178-246)||(7795876-7795945)
chr8 (153-202)||(24068472-24068521)
chr8 (256-333)||(24192676-24192753)
chr8 (178-255)||(39323888-39323965)
chr8 (256-324)||(10669458-10669526)
chr8 (178-246)||(13514803-13514871)
chr8 (178-246)||(13604336-13604404)
chr8 (278-338)||(17455068-17455128)
chr8 (256-324)||(20180687-20180755)
chr8 (186-246)||(36757166-36757226)
chr8 (277-324)||(7844746-7844793)
chr8 (179-246)||(8397197-8397264)
chr8 (168-255)||(16362520-16362607)
chr8 (173-246)||(7815153-7815227)
chr8 (178-259)||(45395953-45396034)
chr8 (166-246)||(36939959-36940039)
chr8 (256-324)||(39174740-39174808)
chr8 (302-362)||(42878875-42878935)
chr8 (184-255)||(37274988-37275059)
chr8 (166-236)||(7951964-7952034)
chr8 (286-364)||(19793100-19793178)
chr8 (262-324)||(39173151-39173213)
chr8 (180-221)||(21671287-21671328)
chr8 (256-324)||(35799486-35799554)
chr8 (256-324)||(42362763-42362831)
[»] chr4 (45 HSPs)
chr4 (153-358)||(36846470-36846674)
chr4 (153-362)||(26631129-26631338)
chr4 (169-361)||(35348795-35348987)
chr4 (169-361)||(39056423-39056615)
chr4 (176-364)||(1521118-1521315)
chr4 (153-333)||(44499895-44500074)
chr4 (256-361)||(26629789-26629894)
chr4 (182-364)||(8363328-8363510)
chr4 (153-246)||(46795939-46796032)
chr4 (182-367)||(56156927-56157112)
chr4 (153-363)||(52137422-52137631)
chr4 (277-361)||(1519809-1519893)
chr4 (278-362)||(35350143-35350227)
chr4 (153-243)||(47667291-47667381)
chr4 (278-363)||(39057802-39057887)
chr4 (262-358)||(26425784-26425880)
chr4 (262-346)||(26491430-26491514)
chr4 (166-246)||(29665500-29665580)
chr4 (166-246)||(38554039-38554119)
chr4 (153-241)||(41348354-41348442)
chr4 (153-246)||(3528300-3528393)
chr4 (186-363)||(26495118-26495295)
chr4 (153-324)||(49895075-49895247)
chr4 (182-364)||(36244706-36244888)
chr4 (3-69)||(38554208-38554275)
chr4 (256-361)||(36845407-36845513)
chr4 (167-243)||(56001196-56001271)
chr4 (153-246)||(307713-307811)
chr4 (280-369)||(26496346-26496435)
chr4 (241-347)||(37106248-37106354)
chr4 (3-57)||(46795792-46795846)
chr4 (3-68)||(307576-307641)
chr4 (256-333)||(44498486-44498563)
chr4 (178-246)||(43418143-43418211)
chr4 (178-246)||(43895555-43895623)
chr4 (153-245)||(20827434-20827528)
chr4 (153-220)||(26376446-26376513)
chr4 (251-324)||(56085382-56085455)
chr4 (256-364)||(56157509-56157617)
chr4 (277-324)||(4872265-4872312)
chr4 (295-362)||(20625556-20625623)
chr4 (295-361)||(20620137-20620203)
chr4 (256-369)||(36243509-36243622)
chr4 (186-242)||(2292264-2292320)
chr4 (311-359)||(9791840-9791888)
[»] chr1 (34 HSPs)
chr1 (153-361)||(48528806-48529015)
chr1 (176-362)||(12667208-12667394)
chr1 (176-361)||(26287709-26287902)
chr1 (153-324)||(40533514-40533685)
chr1 (278-366)||(48527527-48527615)
chr1 (166-361)||(5611724-5611928)
chr1 (256-358)||(7306268-7306370)
chr1 (182-360)||(51446782-51446960)
chr1 (256-361)||(26286410-26286515)
chr1 (182-362)||(14479454-14479634)
chr1 (256-363)||(5613098-5613205)
chr1 (267-361)||(7304810-7304904)
chr1 (256-362)||(12665788-12665894)
chr1 (153-235)||(26803129-26803211)
chr1 (153-242)||(40110565-40110654)
chr1 (174-268)||(24516422-24516516)
chr1 (153-324)||(6047954-6048123)
chr1 (168-324)||(52076566-52076722)
chr1 (277-367)||(18818968-18819058)
chr1 (256-364)||(28050316-28050424)
chr1 (277-364)||(18821773-18821860)
chr1 (180-246)||(51217728-51217794)
chr1 (302-361)||(48492727-48492786)
chr1 (280-362)||(51445587-51445669)
chr1 (280-345)||(9482471-9482536)
chr1 (280-361)||(14478264-14478345)
chr1 (251-324)||(6049432-6049505)
chr1 (302-367)||(14429743-14429808)
chr1 (166-243)||(26055010-26055087)
chr1 (169-246)||(49139911-49139988)
chr1 (153-246)||(50679734-50679827)
chr1 (192-244)||(9210073-9210125)
chr1 (304-364)||(15746827-15746887)
chr1 (190-242)||(33941431-33941483)
[»] scaffold0219 (2 HSPs)
scaffold0219 (153-364)||(6890-7100)
scaffold0219 (252-362)||(8199-8309)
[»] chr6 (14 HSPs)
chr6 (153-323)||(18242220-18242390)
chr6 (169-361)||(138132-138324)
chr6 (169-361)||(146153-146345)
chr6 (252-360)||(11968486-11968594)
chr6 (278-362)||(30231475-30231559)
chr6 (153-364)||(30232817-30233027)
chr6 (278-363)||(136623-136708)
chr6 (284-363)||(35037129-35037208)
chr6 (281-358)||(11967249-11967326)
chr6 (176-229)||(11968400-11968453)
chr6 (263-368)||(11722777-11722882)
chr6 (178-255)||(18773755-18773832)
chr6 (169-244)||(29675589-29675664)
chr6 (292-364)||(8695122-8695194)
[»] chr3 (31 HSPs)
chr3 (256-361)||(37416451-37416556)
chr3 (157-323)||(10301732-10301898)
chr3 (167-273)||(7271518-7271624)
chr3 (256-358)||(37414996-37415098)
chr3 (153-246)||(48253043-48253136)
chr3 (153-246)||(53809406-53809499)
chr3 (153-243)||(47766864-47766954)
chr3 (157-246)||(10339906-10339995)
chr3 (182-362)||(49380893-49381073)
chr3 (182-361)||(13621897-13622076)
chr3 (256-324)||(14745213-14745281)
chr3 (153-324)||(14744098-14744268)
chr3 (178-254)||(26797421-26797497)
chr3 (214-322)||(34123241-34123348)
chr3 (166-246)||(54750369-54750448)
chr3 (178-255)||(17345411-17345488)
chr3 (277-333)||(7270349-7270405)
chr3 (166-242)||(20486122-20486198)
chr3 (166-246)||(25585759-25585839)
chr3 (277-324)||(10338773-10338820)
chr3 (178-241)||(45422103-45422166)
chr3 (173-220)||(48084671-48084718)
chr3 (305-347)||(3817325-3817367)
chr3 (192-246)||(7921595-7921649)
chr3 (178-244)||(40896683-40896749)
chr3 (182-255)||(11220600-11220673)
chr3 (263-363)||(13620916-13621016)
chr3 (295-364)||(40241759-40241827)
chr3 (304-333)||(53612897-53612926)
chr3 (304-332)||(10730912-10730940)
chr3 (169-209)||(21515410-21515450)
[»] chr2 (32 HSPs)
chr2 (165-345)||(19397544-19397724)
chr2 (166-361)||(1147747-1147942)
chr2 (270-361)||(1309396-1309487)
chr2 (182-361)||(4919825-4920004)
chr2 (182-363)||(28610018-28610199)
chr2 (278-362)||(1149223-1149307)
chr2 (256-361)||(1310681-1310786)
chr2 (261-369)||(19398818-19398926)
chr2 (183-319)||(45699569-45699705)
chr2 (308-365)||(8320776-8320833)
chr2 (170-324)||(16289812-16289966)
chr2 (278-362)||(40559144-40559228)
chr2 (301-362)||(102414-102475)
chr2 (256-323)||(23233709-23233776)
chr2 (278-361)||(40556938-40557021)
chr2 (175-249)||(9473984-9474058)
chr2 (263-361)||(25559280-25559378)
chr2 (433-471)||(44833202-44833240)
chr2 (182-255)||(6707027-6707100)
chr2 (263-363)||(28611272-28611372)
chr2 (182-244)||(2717720-2717783)
chr2 (265-364)||(25561681-25561780)
chr2 (157-242)||(25569883-25569968)
chr2 (178-255)||(26205985-26206062)
chr2 (302-367)||(35903500-35903565)
chr2 (301-365)||(101991-102055)
chr2 (178-246)||(4830613-4830681)
chr2 (263-358)||(8321263-8321358)
chr2 (277-324)||(23231575-23231622)
chr2 (180-246)||(4513693-4513759)
chr2 (280-362)||(4921095-4921177)
chr2 (165-243)||(42596673-42596751)
[»] scaffold0114 (1 HSPs)
scaffold0114 (182-361)||(38538-38717)
[»] scaffold0092 (1 HSPs)
scaffold0092 (264-358)||(39825-39919)
[»] scaffold0084 (1 HSPs)
scaffold0084 (178-255)||(11807-11884)
[»] scaffold0141 (1 HSPs)
scaffold0141 (292-358)||(9860-9926)
[»] scaffold0046 (1 HSPs)
scaffold0046 (178-246)||(24753-24821)
[»] scaffold2071 (1 HSPs)
scaffold2071 (302-361)||(740-799)
[»] scaffold0687 (1 HSPs)
scaffold0687 (173-246)||(6496-6570)
[»] scaffold0148 (1 HSPs)
scaffold0148 (301-347)||(15908-15954)
[»] scaffold0121 (1 HSPs)
scaffold0121 (256-323)||(4450-4517)
[»] scaffold0011 (1 HSPs)
scaffold0011 (302-365)||(127427-127490)
[»] scaffold0019 (2 HSPs)
scaffold0019 (304-365)||(61845-61906)
scaffold0019 (307-347)||(63195-63235)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 5e-88; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 166 - 358
Target Start/End: Original strand, 10736861 - 10737053
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacg 265  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10736861 gttcactattagatacaatggacattcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagttaacggaggggaccaaattgattaacg 10736960  T
Q  266 gagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaa 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10736961 gagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttaggggaccaaaagtccaattaa 10737053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 155 - 361
Target Start/End: Complemental strand, 4124961 - 4124754
Alignment:
Q  155 aggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaa 254  Q
    |||||||||  |||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||| |||||||| | |||| | ||||| ||||    
T  4124961 aggtgctgacggttcactattaaatacaatggatatacaatcaaatggttaaaattaaatcaaaatttttaaacattaaacaactaatgaaggggaccaa 4124862  T
Q  255 attgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaa-ttacttagaggaccaaaagtcca 353  Q
    ||| | |||||||||||||||| ||||||||||| |||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  4124861 attaactaacggagcaaaacaaaagggaccaaaacgttgattttatgaattatggaaccaaaatgaaaacaagaaatttacttagaggaccaaaagtcca 4124762  T
Q  354 attaagcc 361  Q
    ||||||||    
T  4124761 attaagcc 4124754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 153 - 362
Target Start/End: Original strand, 1103878 - 1104087
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| |||  ||| ||||||||||||||||| |||| |||| |||||||||||| | |||||   ||||||| |||| ||| |||||||||||| ||    
T  1103878 ttaggtgttgacggttaactattaaatacaatgggcatgtaatctaatggttaaaatcaaatcaatttttttagatattataaaactaacggaggggacc 1103977  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    ||| ||  |||| ||| ||||||||||| ||  ||||||||||||||||||||||||||| ||||||  ||||| ||||||||||| |||||||||||||    
T  1103978 aaactggctaacagagaaaaacaagaggaactgaaatgttgattttacgagttatgggactaaaatgttaacaacaaattacttaggggaccaaaagtcc 1104077  T
Q  353 aattaagcct 362  Q
    ||||||||||    
T  1104078 aattaagcct 1104087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 256 - 364
Target Start/End: Complemental strand, 10735866 - 10735758
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  10735866 ttgactaacggagcaaaacaagagggaccaaaacgttgattttacgagttatgggaccaaaatgaaaacaagtaattacttaggggaccaaaagtccaat 10735767  T
Q  356 taagcctaa 364  Q
    |||||||||    
T  10735766 taagcctaa 10735758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 187 - 363
Target Start/End: Complemental strand, 13519649 - 13519469
Alignment:
Q  187 acatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaa-----cggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||| ||||     |||| |||  ||| ||||  ||||||||||||||||| ||    
T  13519649 acatgcaatcaaatggttaaaatcatatcaaaagttttagacattaaaaaactaaactaacggaagggatcaatttgacaaacggagcaaaacaagaagg 13519550  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||| ||| ||||||||||||||||||||    
T  13519549 accaaaatgttgatttttcgagttatgggactaaaatgtaaacaagaaattagttag-ggaacaaaagtccaattaagccta 13519469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 179 - 361
Target Start/End: Complemental strand, 35047598 - 35047417
Alignment:
Q  179 tacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaaga 278  Q
    |||||||||||||||||| |||| ||||||||| |||||||| ||||  ||||||||| |||| ||| ||  ||   |||| |||||||||||||||| |    
T  35047598 tacaatggacatgcaatcgaatgattaaaattatatcaaaaaatttaagcattaaaaaactaatggatgga-cctttttgactaacggagcaaaacaaaa 35047500  T
Q  279 gggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||   || |||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||| ||||||||||||    
T  35047499 gggacttgaacgttgattttacgagttatgggaccaaaatgaaaacacgaaataacttaggggatcaaaaatccaattaagcc 35047417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 9219380 - 9219262
Alignment:
Q  155 aggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaa 254  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||| ||||||||||||  |||    
T  9219380 aggtgttgaaggttcactattaaatacaatgaacatgcaatcaaacggttaaaatcaaataaaaaattttagacattaaaaaactaacggaggggatcaa 9219281  T
Q  255 attgattaacggagcaaaa 273  Q
    ||||| ||| |||||||||    
T  9219280 attgactaatggagcaaaa 9219262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 280 - 363
Target Start/End: Original strand, 35081474 - 35081557
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  35081474 ggaccaaaacgttgattttacgagttatgggaccaaaatgaaaacaaacaattacttaggggaccaaaagtccaattaagccta 35081557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 28702650 - 28702566
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  28702650 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaacaaattacttaggggacaaaaagtccaattaagcct 28702566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 11797546 - 11797653
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    ||||| |||| |||||||| |||||||    
T  11797546 ttgactaacggagaaaaacaagagggaccaaaatgttgattttacgagttatgagaccaaaatgtaaactcataattatttaggggaccaaatgtccaat 11797645  T
Q  356 taagccta 363  Q
    ||||||||    
T  11797646 taagccta 11797653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 4127290 - 4127372
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  4127290 ggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaacaaattacttagaggaccaagggtccaattaagcct 4127372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 364
Target Start/End: Complemental strand, 1102700 - 1102613
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |||||| |||||| |||  |||||||||||||||||||||||||    
T  1102700 gagggacctaaatgttgattttacgagttatgggaccaatatgtaaacaacaaattagttatgggaccaaaagtccaattaagcctaa 1102613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 8188113 - 8188206
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| |||  |||||| |||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||||| |||||||||    
T  8188113 ttaggtgttgatggttcaccattaaatataatggacatgcaatcaaatggttaaaatcatatcagaaattttagacattaaaaaactaacggag 8188206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 41144531 - 41144636
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||||||||||||  | ||||||||||| ||||||||||  | ||||||||||||||||||||||| |||||| |||| ||||||||| ||||||    
T  41144531 ttgactaacggagcaaaatcaaagggaccaaaacgttgattttagaatttatgggaccaaaatgaaaacaacaaattaattaggggaccaaaaatccaat 41144630  T
Q  356 taagcc 361  Q
    ||||||    
T  41144631 taagcc 41144636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 41143321 - 41143236
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||||||||||||||||  | ||||| ||||||||| ||||||| |||||| |||||||| ||| ||||||||||||||||    
T  41143321 agggaccaaaatgttgattttagaacttatgagaccaaaataaaaacaacaaattagttagaggatcaagagtccaattaagccta 41143236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 224516 - 224596
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||||||||||||||| || ||| |||||||||||||| | | |||||||| ||||||||||||||| |||||||||    
T  224516 gttcactattaaatacaatgaacgtgcgatcaaatggttaaagtcatatcaaaaaatttagacattaaaaaactaacggag 224596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 182 - 362
Target Start/End: Complemental strand, 11796745 - 11796566
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||||||||||||||| || ||| || | ||||||| ||||| |||||||||| ||| |||| |||  ||| |||| | | |||||||||| | ||||    
T  11796745 aatggacatgcaatcaaacggctaatatcatatcaaaagttttaaacattaaaaaactagcggatgggatcaatttgactgagggagcaaaacca-aggg 11796647  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||||| |   |||||| | |||||||||||||||| ||||    ||||| |||| |||||||| ||||||||||||||    
T  11796646 accaaaatatgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaatgtccaattaagcct 11796566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 224357 - 224424
Alignment:
Q  3 ttattgattgttgttgatgatttctgaaatttttct-ggttttgtataaagattgacgacgctgatgt 69  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||    
T  224357 ttattgattgttgttgatgatttctggaatttttctaggttttgtataaagattgatgaagctgatgt 224424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 5975941 - 5975870
Alignment:
Q  171 ctattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    |||||||| | |||||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  5975941 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 5975870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 10978216 - 10978285
Alignment:
Q  180 acaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggg 249  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| ||| |||||||||| ||||||||||||    
T  10978216 acaatgggcatgcaatcgaatggttaaaattatatcaaaaatattaaacattaaaaatctaacggagggg 10978285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5976106 - 5976052
Alignment:
Q  3 ttattgattgttgttgatgatttctgaaatttttctggttttgtataaagattga 57  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  5976106 ttattgattgttgttgatgatttctgaaattttctaggttttgtataaagattga 5976052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 1273270 - 1273190
Alignment:
Q  175 taaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    |||||| ||||||| ||||||| ||||||| |||| | ||||||||| ||| |||||||||| |||||||||||| |||||    
T  1273270 taaatataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggggaccaaa 1273190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 18695560 - 18695653
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| ||| |||||| | ||  |||||||| || |||||||||| |||| |||  | |||||||||||||||||||||||| |||||||||    
T  18695560 ttaggtgttgatagttcagtgttgtatacaatgaacctgcaatcaaacggttgaaaacatatcaaaaattttagacattaaaaaactaacggag 18695653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 298
Target Start/End: Complemental strand, 36898126 - 36897998
Alignment:
Q  172 tattaaatacaatggacatgcaatcaaatggttaaaattagatc--aaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagc 269  Q
    ||||||||||||| ||||||||||||||| |||||||| | |||   |||||||||| |||||||||  ||| | || |  ||||||||| ||||||| |    
T  36898126 tattaaatacaattgacatgcaatcaaattgttaaaatcaaatcgttaaaattttagtcattaaaaaattaaggaagagaaccaaattgaataacggatc 36898027  T
Q  270 aaaacaagagggaccaaaatgttgatttt 298  Q
    ||||    ||||||||| |||||||||||    
T  36898026 aaaagttaagggaccaacatgttgatttt 36897998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 342
Target Start/End: Complemental strand, 31267807 - 31267768
Alignment:
Q  303 gttatgggaccaaaatgaaaacaagaaattacttagagga 342  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  31267807 gttatgggaccaaaatgaaaacaagaaattaattagagga 31267768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 42642057 - 42642128
Alignment:
Q  290 gttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||  | |||||||| |||||||||||||| |||||| |||||||||||||  || |||||||||    
T  42642057 gttgattttagaacttatgggatcaaaatgaaaacaataaattagttagaggaccaaatatcgaattaagcc 42642128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 255
Target Start/End: Original strand, 22812321 - 22812402
Alignment:
Q  175 taaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaag-ctaacggagggggccaaa 255  Q
    |||||| ||||||| ||||||| ||||||| |||| | ||||||||| ||| ||||||||||  |||||||||||| |||||    
T  22812321 taaatataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaaactaacggaggggaccaaa 22812402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 8523805 - 8523865
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||||||||||||||||||||  ||||||| |||| |||||||| | || |||||||||    
T  8523805 agttatgggaccaaaatgaaaacttgaaattaattaggggaccaaatgacctattaagcct 8523865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 23334019 - 23334087
Alignment:
Q  295 ttttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    |||||| | |||||||||||||||| ||||    ||||| ||||||||||||| |||||||||||||||    
T  23334019 ttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagccta 23334087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 22308860 - 22308903
Alignment:
Q  304 ttatgggaccaaaatgaaaacaagaaattacttagaggaccaaa 347  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||    
T  22308860 ttatgggaccaaaatgaaaacatgaaattatttaggggaccaaa 22308903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 23325976 - 23325910
Alignment:
Q  295 ttttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||| | |||||||||||||||| ||||    ||||| ||||||||||||| |||||||||||||    
T  23325976 ttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagcc 23325910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 21389056 - 21389149
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| ||| |||||| | ||  |||||||| || | |||||||| |||| |||  | || ||||||||||||||||||||| |||||||||    
T  21389056 ttaggtgttgatagttcagtgttttatacaatgaacctacaatcaaacggttgaaaacatataaaaaattttagacattaaaaaactaacggag 21389149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 41805893 - 41805852
Alignment:
Q  297 ttacgagttatgggaccaaaatgaaaacaagaaattacttag 338  Q
    |||| |||||||||| ||||||||||||||||||||| ||||    
T  41805893 ttacaagttatgggatcaaaatgaaaacaagaaattagttag 41805852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 326523 - 326467
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaa 234  Q
    ||||||||||| |||||||||||||| ||||  | || |||||| ||||||||||||    
T  326523 atacaatggacctgcaatcaaatggtcaaaacaatataaaaaatattagacattaaa 326467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 9170831 - 9170891
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    |||||||||||||||||||||||||||| | || |||||| |  |||||||| || |||||    
T  9170831 aatggacatgcaatcaaatggttaaaatgatataaaaaatatctgacattaagaaactaac 9170891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 12374610 - 12374654
Alignment:
Q  295 ttttacgagttatgggaccaaaatgaaaacaagaaattacttaga 339  Q
    ||||| ||||||||  ||||||||||||||||||||||| |||||    
T  12374610 ttttaggagttatgaaaccaaaatgaaaacaagaaattagttaga 12374654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 36899026 - 36899082
Alignment:
Q  289 tgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggacca 345  Q
    ||||||||||  |||||||| ||| ||||||||||| |||||||| ||||| |||||    
T  36899026 tgttgattttttgagttatgagacaaaaatgaaaactagaaattagttagatgacca 36899082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 2e-75; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 153 - 364
Target Start/End: Original strand, 43442673 - 43442884
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||||||||||  ||||||| |||||||||| |||||||||||||||| |||||||| | |||||||| ||||||||||||||  |||||||||||| ||    
T  43442673 ttaggtgctgacggttcactgttaaatacaacggacatgcaatcaaattgttaaaatcaaatcaaaaaatttagacattaaaagactaacggaggggacc 43442772  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |    
T  43442773 aaattgactaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaatatgaaaacaacaaattacttaggggaccaaaagttc 43442872  T
Q  353 aattaagcctaa 364  Q
    |||||| |||||    
T  43442873 aattaaacctaa 43442884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 169 - 362
Target Start/End: Complemental strand, 10956035 - 10955842
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggag 268  Q
    ||||||||||  |||||||||  |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| | ||||||| ||||||||    
T  10956035 cactattaaacgcaatggacactcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaatctaacggaggggactaaattgactaacggag 10955936  T
Q  269 caaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||||||| |||| ||||||||||  |||||||| | |||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  10955935 caaaacaagagggactaaaacgttgattttataagttatggaatcaaaatgaaaacaacaaattacttaagggaccaaaagtccaattaagcct 10955842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 176 - 362
Target Start/End: Complemental strand, 666909 - 666723
Alignment:
Q  176 aaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaaca 275  Q
    ||||| ||| |||||||||| ||||||||||||| | |||||||| ||| ||||||||||  |||||||||||| ||||||||| |||||||||||||||    
T  666909 aaatataatagacatgcaattaaatggttaaaatcaaatcaaaaaatttcgacattaaaatactaacggaggggaccaaattgactaacggagcaaaaca 666810  T
Q  276 agagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||| |||| || |||||| |||||||| || ||||||||||||    ||||| |||| |||| |||| |||||||||||||    
T  666809 agagggaccgaaatattaattttatgagttatgagatcaaaatgaaaactgataattatttaggggactaaaaatccaattaagcct 666723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 153 - 361
Target Start/End: Original strand, 26146617 - 26146825
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||   |||||||||| | |||||||| |||||||||||||||  |||||||||||  |    
T  26146617 ttaggtgatgagagttcactattaactacaatggacatgcaatcgggtggttaaaatcatatcaaaaagtttagacattaaaaaaataacggaggggatc 26146716  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    || |||| |||||| |  |      ||||||| |||  |||||||||  | |||| ||| |||||||||||||| |||||| |||| |||||||||||||    
T  26146717 aatttgactaacggtgacatttgtaagggaccgaaacattgattttaaaatttataggatcaaaatgaaaacaacaaattagttaggggaccaaaagtcc 26146816  T
Q  353 aattaagcc 361  Q
    |||||||||    
T  26146817 aattaagcc 26146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 10957189 - 10957271
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagc 360  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10957189 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaacaaattacttaggggaccaaaagtccaattaagc 10957271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 17288155 - 17288249
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagg 247  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  17288155 ttaggtgctgacggttcactattaaatacaatggacatgcaatcaaatagttaaaatcatatcaaaaaatttagacattaaaaaactaacggagg 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 175 - 324
Target Start/End: Original strand, 29589202 - 29589351
Alignment:
Q  175 taaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaac 274  Q
    |||||| |||||| ||| ||||||||||||||||| | ||||||||||||| |||||||||| ||||| | || | ||||||| | |||||||||||||     
T  29589202 taaatataatggatatgaaatcaaatggttaaaatcaaatcaaaaattttaaacattaaaaaactaactgtggcgaccaaattaaataacggagcaaaag 29589301  T
Q  275 aagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
      |||||| ||||||| |||||||| || |||| ||||||||||||||||    
T  29589302 ttgagggagcaaaatgatgattttaagacttattggaccaaaatgaaaac 29589351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 669407 - 669510
Alignment:
Q  262 aacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||| ||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||    |||||||||| ||||||||| ||||||||||||    
T  669407 aacgaagcaaaataaaagggaccgaaatgttgattttacgaattatgggaccaaaatgaaaactgataattacttaggggaccaaaaatccaattaagcc 669506  T
Q  362 taat 365  Q
    ||||    
T  669507 taat 669510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 26135722 - 26135637
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||    
T  26135722 agggaccaaaacgttgattttagaagttatgggaccaaaatgaaaacatcaaattagttaggggaccaaaagtccaattaagccta 26135637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 28326303 - 28326396
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||| | || ||||| ||||||||||||||| |||||||||    
T  28326303 ttaggtgccgacggttcactattaaatataatggacatgcaatcaaatggttaaaatcatattaaaaaatttagacattaaaaaactaacggag 28326396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 343
Target Start/End: Original strand, 35296757 - 35296918
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||||||||||||||| ||||||||| | |||||||| |||||||||||||||  ||||||||  |  ||| |||| |||||||||||||| |  ||     
T  35296757 aatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattaaaaaattaacggagatgatcaatttgactaacggagcaaaaccaagggt 35296856  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggac 343  Q
    ||||||||||   |||||| | |||| ||||||||||| |||| | |||||| |||||||||    
T  35296857 accaaaatgtgagttttacaatttataggaccaaaatgtaaactacaaattatttagaggac 35296918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 41329409 - 41329588
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaa-caagagg 280  Q
    |||||||||||||||||| |||||| || | |||||||| |||| |||||||||| ||||||||||||  ||| |||| | |||||| |||| |||| ||    
T  41329409 aatggacatgcaatcaaacggttaatatcacatcaaaaaatttaaacattaaaaatctaacggaggggatcaatttgactgacggagtaaaatcaag-gg 41329507  T
Q  281 gaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||||   |||||| | |||| ||||||||||| ||||    ||||| |||| |||||||| |||||||||||||    
T  41329508 gaccaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatgtccaattaagcc 41329588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 41515199 - 41515106
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||| | || ||||| |||||||||||||||  ||||||||    
T  41515199 ttaggtgccgacggttcactattaaatataatggacatgcaatcaaatggttaaaatcatataaaaaactttagacattaaaaaattaacggag 41515106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 43441449 - 43441345
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||||||||||||||||    ||||||||||||| || |||||| |||||||| ||||||||||||||||| || |||||||| ||||||||| |||||     
T  43441449 ttgattaacggagcaaacgctgagggaccaaaatattaattttatgagttatgagaccaaaatgaaaacaacaatttacttaggggaccaaaaatccaac 43441350  T
Q  356 taagc 360  Q
    |||||    
T  43441349 taagc 43441345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 323
Target Start/End: Complemental strand, 3330893 - 3330728
Alignment:
Q  157 gtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaat 256  Q
    |||||||  ||||||||| | |||||||| ||||||||||||| ||||||||| | |||||||| |||||||||||| || ||||  |||  | ||||||    
T  3330893 gtgctgacggttcactat-agatacaatgaacatgcaatcaaacggttaaaatcaaatcaaaaaatttagacattaacaaactaattgagtagaccaaat 3330795  T
Q  257 tgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaa 323  Q
    ||| || |||||||||    |||||||| ||||| |||||||| || ||| | ||||||||||||||    
T  3330794 tgaatagcggagcaaatgttgagggaccgaaatggtgattttaagacttaagagaccaaaatgaaaa 3330728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 45721679 - 45721772
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||| ||||  ||||| ||||| |||||||| ||||||||||||||||||||||| | || ||||| ||||||||||||||| |||||||||    
T  45721679 ttaggtactgacggttcattattagatacaatgaacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggag 45721772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 2414848 - 2414746
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||||||||||||| | ||||||||||| |||| ||||| ||   |||||| ||||||||||||||||||||||||   ||||||||||||||||    
T  2414848 ttgactaacggagcaaaaccaaagggaccaaaacgttggtttta-ga---atgggagcaaaatgaaaacaagaaattacttgagggaccaaaagtccaat 2414753  T
Q  356 taagcct 362  Q
    |||||||    
T  2414752 taagcct 2414746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 35295802 - 35295734
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||    
T  35295802 ttgattaactgagcaaaacaagagggactaaaacgttgactttacgagttatgggaccaaaatgtaaac 35295734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 324
Target Start/End: Complemental strand, 32653668 - 32653498
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||||||| |||||||| | |  || |||||||||||||||||| ||||||||| | |||||||||||||| ||||||||| |||||||| ||| ||    
T  32653668 ttaggtgctgacagttcactgt-aggtataatggacatgcaatcaaacggttaaaatgatatcaaaaattttagtcattaaaaaactaacggatgggacc 32653570  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |   |||   |||||||||||| |  |||||| ||||||   |||||| | ||||| |||||||||| ||||    
T  32653569 attctgaccgacggagcaaaaccaaggggaccgaaatgtgagttttacaatttatgagaccaaaatgtaaac 32653498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 44376646 - 44376762
Alignment:
Q  201 ggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttac 300  Q
    ||||||||| | |||||||| ||||||||||||||| ||||||||| ||   || |||| ||| |||||||||    ||||||||||||| ||||||||     
T  44376646 ggttaaaatcaaatcaaaaaatttagacattaaaaaactaacggagtggattaatttgactaatggagcaaaagttaagggaccaaaatgatgattttaa 44376745  T
Q  301 gagttatgggaccaaaa 317  Q
     ||||||||||||||||    
T  44376746 aagttatgggaccaaaa 44376762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 44385513 - 44385629
Alignment:
Q  201 ggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttac 300  Q
    ||||||||| | |||||||| ||||||||||||||| ||||||||| ||   || |||| ||| |||||||||    ||||||||||||| ||||||||     
T  44385513 ggttaaaatcaaatcaaaaaatttagacattaaaaaactaacggagtggattaatttgactaatggagcaaaagttaagggaccaaaatgatgattttaa 44385612  T
Q  301 gagttatgggaccaaaa 317  Q
     ||||||||||||||||    
T  44385613 aagttatgggaccaaaa 44385629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 8426935 - 8427005
Alignment:
Q  292 tgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||||||||| |||  |||||||||||||||| ||||||| |||| |||| ||||||||||||||||||    
T  8426935 tgattttacgagctataagaccaaaatgaaaacatgaaattaattaggggactaaaagtccaattaagcct 8427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17288017 - 17288085
Alignment:
Q  1 tattattgattgttgttgatgatttctgaaatttttctggttttgtataaagattgacgacgctgatgt 69  Q
    |||||||||||||||||||||||||||| |||||||    ||||||||||||||||| || ||||||||    
T  17288017 tattattgattgttgttgatgatttctggaattttttgaattttgtataaagattgatgaagctgatgt 17288085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 39981409 - 39981312
Alignment:
Q  267 agcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    |||||||| | | ||||||||||||  ||||||| | |||||||||||||||| ||||    ||||| |||||||| |||| ||||||||||||||||    
T  39981409 agcaaaaccaaaaggaccaaaatgtgaattttacaatttatgggaccaaaatgtaaacgcacaattatttagaggatcaaatgtccaattaagcctaa 39981312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 44372832 - 44372755
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    |||| |||||||||||||   |||||||||||||| | |||||| |||||||| |||||||||||||||  |||||||    
T  44372832 ttgaataacggagcaaaagtcgagggaccaaaatgataattttaagagttatgagaccaaaatgaaaactcgaaatta 44372755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 44381688 - 44381611
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    |||| |||||||||||||   |||||||||||||| | |||||| |||||||| |||||||||||||||  |||||||    
T  44381688 ttgaataacggagcaaaagtcgagggaccaaaatgataattttaagagttatgagaccaaaatgaaaactcgaaatta 44381611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 41328298 - 41328215
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||||||   |||||| | |||||||||||||||| ||||    ||||| ||||||||||||| |||||||||||||||    
T  41328298 ggaccaaaatgtgagttttacaatttatgggaccaaaatgtaaacgcataattatttagaggaccaaatgtccaattaagccta 41328215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 44554825 - 44554884
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||| ||  |||||||||    
T  44554825 agttatgggaccaaaatgaaaacaacaaataagttagaggaccaaaggtttaattaagcc 44554884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 324
Target Start/End: Original strand, 48312691 - 48312734
Alignment:
Q  281 gaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||||||||| |||||||| || |||||||||||||||||||||    
T  48312691 gaccaaaatgatgattttaagatttatgggaccaaaatgaaaac 48312734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 3413582 - 3413544
Alignment:
Q  309 ggaccaaaatgaaaacaagaaattacttagaggaccaaa 347  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  3413582 ggaccaaaatgaaaacacgaaattatttagaggaccaaa 3413544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 15992216 - 15992170
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||||||||| |||||||||| |||| |||| |||||||||||||||    
T  15992216 agggaccaaagtgttgatttttcgagctatgagaccaaaatgaaaac 15992170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 28326159 - 28326213
Alignment:
Q  3 ttattgattgttgttgatgatttctgaaatttttctggttttgtataaagattga 57  Q
    ||||||||||||||||| ||||| || ||||||   |||||||||||||||||||    
T  28326159 ttattgattgttgttgacgatttatggaattttctgggttttgtataaagattga 28326213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 9081496 - 9081419
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    |||| ||| |||||||||   |||||| |||| || |||||||| || |||||||||||||||||||||  |||||||    
T  9081496 ttgaataaaggagcaaaagttgagggagcaaattgatgattttatgacttatgggaccaaaatgaaaaccggaaatta 9081419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 30333480 - 30333415
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaa 218  Q
    ||||||||||| ||| |||| |||||||||| ||||| |||||| ||| |||||||| | ||||||    
T  30333480 ttaggtgctgacagtacactgttaaatacaaaggacaagcaatctaattgttaaaatcaaatcaaa 30333415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 43931840 - 43931881
Alignment:
Q  214 tcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    |||||||| |||||||||||||| |||||||||||| |||||    
T  43931840 tcaaaaatgttagacattaaaaaactaacggaggggaccaaa 43931881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 11501232 - 11501192
Alignment:
Q  307 tgggaccaaaatgaaaacaagaaattacttagaggaccaaa 347  Q
    ||||||||||||||||||| ||||||| ||| |||||||||    
T  11501232 tgggaccaaaatgaaaacatgaaattaattaaaggaccaaa 11501192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 3e-74; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 153 - 362
Target Start/End: Original strand, 43203190 - 43203399
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||||||||| ||    
T  43203190 ttaggtgctgatagttcacttttaaatacaatggacatgcaatcaaatgtttaaaattaaatcaaaaaatttagacattaaaaaactaacggaggggacc 43203289  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    ||||||| | ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| || |||||| |||  |||||||||||||    
T  43203290 aaattgactgacggagcaaaataagagggacggaaatgttgattttacgagttatgggaccaaaatgaaaataacaaattatttaatggaccaaaagtcc 43203389  T
Q  353 aattaagcct 362  Q
    ||||||||||    
T  43203390 aattaagcct 43203399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 153 - 361
Target Start/End: Complemental strand, 31844574 - 31844366
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||||||||||  ||||||| |||| |||||| ||||||||||||| |||||||||| | ||||||||||||||| ||||||   | |||||||||| ||    
T  31844574 ttaggtgctgatggttcactgttaattacaatagacatgcaatcaagtggttaaaatcaaatcaaaaattttagaaattaaaggacaaacggaggggacc 31844475  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||   |||||||||||||    
T  31844474 aaattgactaacggagcaaaacaagagggaccaaaatgttaattttacgagttacgggactaaaatgaaaacaacaaattactttagggaccaaaagtcc 31844375  T
Q  353 aattaagcc 361  Q
    |||||||||    
T  31844374 aattaagcc 31844366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 166 - 318
Target Start/End: Complemental strand, 42793892 - 42793740
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacg 265  Q
    |||||||||||| |||||||||||||||||| |||||||||||| | ||||||| ||||||||||||||||  |||| |||||| ||   |||| |||||    
T  42793892 gttcactattaattacaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacagaggggacctttttgactaacg 42793793  T
Q  266 gagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaat 318  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  42793792 gagcaaaacaagagggaccaaaatgttaattttacaatttatgggaccaaaat 42793740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 167 - 364
Target Start/End: Original strand, 24306049 - 24306246
Alignment:
Q  167 ttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacgg 266  Q
    ||||||||||||||||||||| || |||| ||||||||||||||| |||||||  ||||| ||||||||| |||||||   || ||   || | ||||||    
T  24306049 ttcactattaaatacaatggagatccaattaaatggttaaaattaaatcaaaatatttaggcattaaaaaactaacggcatggacctttttaactaacgg 24306148  T
Q  267 agcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
     |||||     | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  24306149 ggcaaacgttaaaggaccaaaatattgattttacgagttatgggaccaaaatgaaaacaagaaattacttagggaaccaaaagtcctattaagcctaa 24306246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 333
Target Start/End: Complemental strand, 24191582 - 24191403
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||||||||||  ||||||||| | |||||||||||||||||||||| ||||||||| | |||||||| |||||||||||| || ||||||||| ||  |    
T  24191582 ttaggtgctgacggttcactat-agatacaatggacatgcaatcaaacggttaaaatcaaatcaaaaaatttagacattaacaaactaacggagtggatc 24191484  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    || |||| |||| ||||||||    || |||||||||| |||||||| ||||||||||||||||| ||||||  |||||||    
T  24191483 aatttgagtaacagagcaaaagttaagagaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaatta 24191403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 256 - 363
Target Start/End: Complemental strand, 38697971 - 38697864
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| |  ||||||||||| ||||||||||  ||||    
T  38697971 ttgactaacggagcaaaacaagagggaccaaaatgttgattttacaagttatggaaccaaaatgtaaatagaaaattacttaggggaccaaaagatcaat 38697872  T
Q  356 taagccta 363  Q
    ||||||||    
T  38697871 taagccta 38697864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 43202178 - 43202095
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagc 360  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  43202178 gagggaccaaaatgttgattttacgagttatgggactaaaatgaaaacaacaaattacttaggggatcaaaagtccaattaagc 43202095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 31845807 - 31845912
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||  ||||||||| ||||||    
T  31845807 ttgattaacggagcaaacgttgagggaccaaaatgttgattttatgagttatgggaccaaaatgaaaacaacaatttacttaagggaccaaaactccaat 31845906  T
Q  356 taagcc 361  Q
    ||||||    
T  31845907 taagcc 31845912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 28291398 - 28291293
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||    |||||||||| ||||||||| ||||||    
T  28291398 ttgactaacgaagcaaaataagagggaccgaaatgttgattttacgaattatgggaccaaaatgaaaactgataattacttaggggaccaaaaatccaat 28291299  T
Q  356 taagcc 361  Q
    ||||||    
T  28291298 taagcc 28291293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 38187 - 38095
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  38187 ttaggtgctgacggttcactgttaaatacaatggacatgcaattaaatggttaaaatcatatcaaaaaatttagacattaaaaa-ctaacggag 38095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 39516410 - 39516503
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||| | || ||||| ||||||||||||||| |||||||||    
T  39516410 ttagatgctgacggttcactattagatacaatggacatgcaatcaaatggttaaaatcacatgaaaaaatttagacattaaaaaactaacggag 39516503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 363
Target Start/End: Complemental strand, 9853744 - 9853563
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||| ||||||||||||  ||| |||| | ||||||||||||    | |    
T  9853744 aatggatatgcaatcaaacggttaaaattatatcaaaaaatttagatattaaaaaactaacggaggggatcaatttgactgacggagcaaaacccaggag 9853645  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    |||||||| ||  |||||| | |||||||||||||||  |||||   ||||| ||| |||| | || || ||||||||||||    
T  9853644 accaaaatattagttttacaatttatgggaccaaaatataaacatataattatttaaaggagctaatgttcaattaagccta 9853563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 364
Target Start/End: Original strand, 9854899 - 9855000
Alignment:
Q  263 acggagcaaaa-caagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||| ||||||| |||||||||| |||||||| | |||||||||||||||| |||||   ||||| ||||||||||||| |||||||||||||    
T  9854899 acggagcaaaatcaagagg-accaaaatgtggattttacaatttatgggaccaaaatgtaaacacataattatttagaggaccaaatgtccaattaagcc 9854997  T
Q  362 taa 364  Q
    |||    
T  9854998 taa 9855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 22621047 - 22621136
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    ||||||| |||| ||||||  |||||||||||||||||||||||||||| ||||||| | ||||| ||||||| |||||||||| |||||    
T  22621047 ttaggtggtgaaggttcaccgttaaatacaatggacatgcaatcaaatgattaaaatcatatcaagaattttatacattaaaaaactaac 22621136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38324 - 38256
Alignment:
Q  1 tattattgattgttgttgatgatttctgaaatttttctggttttgtataaagattgacgacgctgatgt 69  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| || ||||||||    
T  38324 tattattgattgttgttgatgatttctggaattttttgggttttgtataaagattgatgaagctgatgt 38256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 7770180 - 7770107
Alignment:
Q  173 attaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||| ||||||||||||| |||||||||||||||||| | || ||||| ||||||||||||||| |||||||||    
T  7770180 attagatacaatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggag 7770107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 10668112 - 10667995
Alignment:
Q  216 aaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaa 315  Q
    ||||| ||||||||||||||| | |||||| | | ||||||||| |||| |||||||    |||||||||||||| ||||||||  | ||||||||||||    
T  10668112 aaaaaatttagacattaaaaaaccaacggatgtgaccaaattgactaacagagcaaatgttgagggaccaaaatgctgattttaaaatttatgggaccaa 10668013  T
Q  316 aatgaaaacaagaaatta 333  Q
    |||||||||  |||||||    
T  10668012 aatgaaaactcgaaatta 10667995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 319
Target Start/End: Complemental strand, 38697349 - 38697196
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacg 265  Q
    |||||| |||| | |||||||||||  |||| |||||||||| | | ||||||| |||||||||||||||   ||||||||||| ||   |||| | | |    
T  38697349 gttcaccattacaaacaatggacatataatctaatggttaaattcatatcaaaagttttagacattaaaatagtaacggaggggacctttttgactgagg 38697250  T
Q  266 gagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatg 319  Q
    |||||||| || |||||||||||||||| |||||  | ||||| ||||||||||    
T  38697249 gagcaaaataaaagggaccaaaatgttggttttataatttatgagaccaaaatg 38697196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 7777852 - 7777784
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||||||||| |||||||||||||||||| | || ||||| ||||||||||||||| |||||||||    
T  7777852 atacaatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggag 7777784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 24305133 - 24305074
Alignment:
Q  279 gggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttag 338  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||    
T  24305133 gggaccaaaatgttgattttactagttatagaaccaaaatgaaaacaaggaattacttag 24305074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 28291396 - 28291483
Alignment:
Q  274 caagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| |||||||    ||||| |||| |||| |||| ||||||||||||    
T  28291396 caagagggaccgaaatgttaattttacgagttatgggaccaaagtgaaaactgataattatttaggggactaaaaatccaattaagcc 28291483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 7795945 - 7795876
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagat-caaaaattttagacattaaaaagctaacggag 246  Q
    ||||||||||||| |||||||||||||||||| | ||  ||||| ||||||||||||||| |||||||||    
T  7795945 atacaatggacatacaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggag 7795876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 24068521 - 24068472
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatgg 202  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  24068521 ttaggtgctgacggttcactattagatacaatggacatgcaatcaaatgg 24068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 24192676 - 24192753
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    ||||||||||||| ||||   ||| |||||||||| |||||||| ||||||||||||||||| ||||||  |||||||    
T  24192676 ttgattaacggagtaaaagttgagagaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaatta 24192753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 39323965 - 39323888
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||| |||||  || |||| ||||||||| || |||||    
T  39323965 atacaatagacatgcaatctaatggttaaaattatatcaaaaatattagatcttgaaaaactaacggagaggaccaaa 39323888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 10669458 - 10669526
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||| ||||||||||||    |||| |||||||||||||||||| || |||||||||||||||||||||    
T  10669458 ttgaataacggagcaaacgttgaggtaccaaaatgttgattttaagatttatgggaccaaaatgaaaac 10669526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 13514803 - 13514871
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||  |||| ||||||||| |||||||||    
T  13514803 atacaatagacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggag 13514871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 13604336 - 13604404
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||  |||| ||||||||| |||||||||    
T  13604336 atacaatagacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggag 13604404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 338
Target Start/End: Complemental strand, 17455128 - 17455068
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttag 338  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||||||||| |||||| ||||    
T  17455128 agggaccaaaaagttgattttacaaattatgtgaccaaaatgaaaacaaaaaattagttag 17455068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 20180687 - 20180755
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||| |||||||||||||   |||||||||||||| | |||||| |||||||| |||||||||||||||    
T  20180687 ttgaataacggagcaaaagtcgagggaccaaaatgataattttaagagttatgagaccaaaatgaaaac 20180755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 36757166 - 36757226
Alignment:
Q  186 gacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||||| ||||||||||||| | |||||||| ||||||||||||||| |||| ||||    
T  36757166 gacatgcaattaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaatggag 36757226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 7844793 - 7844746
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||    
T  7844793 gagggaccaaaatgatgattttaagacttatgggaccaaaatgaaaac 7844746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 8397197 - 8397264
Alignment:
Q  179 tacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||||| ||||||||||||||| |||||| ||||||||| |||  ||||| ||| |||||||||    
T  8397197 tacaatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattataaaactaacggag 8397264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 16362607 - 16362520
Alignment:
Q  168 tcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||| ||| |||||||| || ||||||| || |||| |||| | ||||||||| |||||||||||||| ||||||||| || |||||    
T  16362607 tcactgttatatacaatgtacctgcaatcgaacggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggaccaaa 16362520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 7815227 - 7815153
Alignment:
Q  173 attaaatacaatggacatgcaatcaaatggttaaaattagat-caaaaattttagacattaaaaagctaacggag 246  Q
    |||| |||||||||||||  ||||||||||||||||| | ||  ||||| ||||||||||||||| |||||||||    
T  7815227 attagatacaatggacatagaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggag 7815153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 45395953 - 45396034
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattga 259  Q
    |||||||||||||||||||||| |||||||||   || |||||| | ||||||||| || ||||||||| || |||| ||||    
T  45395953 atacaatggacatgcaatcaaacggttaaaatcgtataaaaaatatcagacattaagaaactaacggagtggaccaatttga 45396034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 36939959 - 36940039
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||||||| ||||||||||| ||||||| ||||||| |||  | ||||||| | ||||| ||||||||  ||||||||    
T  36939959 gttcactattatatacaatggacctgcaatcgaatggttgaaaccatatcaaaattattagatattaaaaaattaacggag 36940039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 39174740 - 39174808
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||| |||||||||||||   |||||||||||||| ||||||||  | |||| ||||||||||||||||    
T  39174740 ttgaataacggagcaaaagttgagggaccaaaatgatgattttaaaacttataggaccaaaatgaaaac 39174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 42878875 - 42878935
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||||||||||||||||||||  ||||||| |||| |||||||| | || |||||||||    
T  42878875 agttatgggaccaaaatgaaaacttgaaattaattaggggaccaaatgacctattaagcct 42878935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 37275059 - 37274988
Alignment:
Q  184 tggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||||||||||| ||||||| |||| | |||| |||| ||| |||||||||| ||||||||| || |||||    
T  37275059 tggacatgcaatcgaatggttgaaatcatatcagaaatgttatacattaaaaaactaacggagaggaccaaa 37274988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 7951964 - 7952034
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaa 236  Q
    ||||||||| ||||||||||||| || |||||||| |||||||| |  |||||| | |||||||| |||||    
T  7951964 gttcactatcaaatacaatggacttgtaatcaaatagttaaaatcatctcaaaattattagacataaaaaa 7952034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 19793100 - 19793178
Alignment:
Q  286 aaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    ||||||||||||||||| |||||||| |||||||||||     |||||||||   |||||||| || ||||||||||||    
T  19793100 aaatgttgattttacgaattatgggatcaaaatgaaaattgataattacttaagagaccaaaaatctaattaagcctaa 19793178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 39173213 - 39173151
Alignment:
Q  262 aacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||||||||||   ||||||||||||||  ||||||| || |||| ||||||||||||||||    
T  39173213 aacggagcaaaagttgagggaccaaaatgacgattttaagacttataggaccaaaatgaaaac 39173151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 21671287 - 21671328
Alignment:
Q  180 acaatggacatgcaatcaaatggttaaaattagatcaaaaat 221  Q
    ||||| ||||||||||||||||||| |||||| |||||||||    
T  21671287 acaatagacatgcaatcaaatggttgaaattatatcaaaaat 21671328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 35799554 - 35799486
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||| |||||||||||||   |||||||||||||| | |||||| || ||||  |||||||||||||||    
T  35799554 ttgaataacggagcaaaagttgagggaccaaaatgataattttaagacttataagaccaaaatgaaaac 35799486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 42362763 - 42362831
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||| |||||||||||||   ||| ||||||| | |||||||| |||||||| | ||||||||||||||    
T  42362763 ttgaataacggagcaaaagttgagtgaccaaagtattgatttttcgagttatagaaccaaaatgaaaac 42362831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 6e-72; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 153 - 358
Target Start/End: Original strand, 36846470 - 36846674
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| |||  ||||||| ||||||| |||||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||| ||| ||    
T  36846470 ttaggtgttgacggttcactgttaaatataatggacatgcaatcaaatggttaaaatcaaatcaaaaaatttagacattaaaaa-ctaacggaagggacc 36846568  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  36846569 aaattgacgaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaacaaattacttagggggccaaaagtcc 36846668  T
Q  353 aattaa 358  Q
    ||||||    
T  36846669 aattaa 36846674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 153 - 362
Target Start/End: Original strand, 26631129 - 26631338
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||||||||||   |||||| ||||||||||| ||||||||||||| |||||||||| | |||||||| |||||||||||||   | |||||||||| ||    
T  26631129 ttaggtgctgatgattcactgttaaatacaatagacatgcaatcaagtggttaaaatcaaatcaaaaaatttagacattaaaggacaaacggaggggacc 26631228  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||| | |||||||||||||    
T  26631229 aaattgactaacggagcaaaacaagaggaaccaaaatgttgattttacgagttatgagaccaaaatgaaaataacaaattacttgggggaccaaaagtcc 26631328  T
Q  353 aattaagcct 362  Q
    ||||||||||    
T  26631329 aattaagcct 26631338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 169 - 361
Target Start/End: Complemental strand, 35348987 - 35348795
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggag 268  Q
    ||||||||||  |||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||| | ||| ||    
T  35348987 cactattaaacgcaatggacactcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagctaacggaggggactaaattgactgacgaag 35348888  T
Q  269 caaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  35348887 caaaacaagagggactaaaacgttgattttacaagttatgggaccaaaatgaaaacaacaaattacttaagggaccaaaagtccaattaagcc 35348795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 169 - 361
Target Start/End: Complemental strand, 39056615 - 39056423
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggag 268  Q
    ||||||||||  |||||||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||| |||  | ||||||| ||||||||    
T  39056615 cactattaaacgcaatggacactcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagctaacggtgggaactaaattgactaacggag 39056516  T
Q  269 caaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||||||| |||| ||||||||||| | ||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  39056515 caaaacaagagggactaaaacgttgattttacaaattatgagaccaaaatgaaaacaacaaattacttaagggaccaaaagtccaattaagcc 39056423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 176 - 364
Target Start/End: Original strand, 1521118 - 1521315
Alignment:
Q  176 aaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag----------ggggccaaattgattaacg 265  Q
    ||||||| ||||||| |||||||||||||||||| | || |||||||| ||||||||||||  ||||| ||          ||| ||||||||| |||||    
T  1521118 aaatacattggacatacaatcaaatggttaaaataaaataaaaaattt-agacattaaaaaattaacgaagtaaaagttgagggaccaaattgactaacg 1521216  T
Q  266 gagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    ||| ||||   |||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1521217 gagtaaaagttgagggaccaaaatgttgattttacgaattatgggatcaaaatgaaaacaacaaattagttagaggaccaaaagtccaattaagcctaa 1521315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 333
Target Start/End: Original strand, 44499895 - 44500074
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||||||||||  ||||||||| | |||||||||||||||||||||| ||||||||| | |||||||| | |||||||||| || ||||||||| ||  |    
T  44499895 ttaggtgctgacggttcactat-agatacaatggacatgcaatcaaacggttaaaatcaaatcaaaaaatatagacattaacaaactaacggagtggatc 44499993  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    || |||| |||||||||||||    ||||||||||||| |||||||| ||||||||||||||||| ||||||  |||||||    
T  44499994 aatttgactaacggagcaaaagttaagggaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaatta 44500074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 26629894 - 26629789
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||  ||||||||||||||||    
T  26629894 ttgattaacggagcaaacgttgagggaccaaaatgttgattttatgagttatgggaccaaaatgaaaacaacaatttacttaagggaccaaaagtccaat 26629795  T
Q  356 taagcc 361  Q
    ||||||    
T  26629794 taagcc 26629789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 364
Target Start/End: Original strand, 8363328 - 8363510
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||||||||||||||| |   || || | ||||||||||||| |||||||||| ||||||||||||  ||| |||| |||||||||||||| | ||||    
T  8363328 aatggacatgcaatcaaacgacgaatatcatatcaaaaattttaaacattaaaaaactaacggaggggatcaatttgactaacggagcaaaaccaaaggg 8363427  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    ||||||||||   |||||| | |||| ||||||||||| ||||    ||||| |||| |||||||| ||||||||||||||||    
T  8363428 accaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatgtccaattaagcctaa 8363510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 46795939 - 46796032
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  46795939 ttaggtgccgacggttcactattaaatacaatggacatgcaatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaacggag 46796032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 182 - 367
Target Start/End: Complemental strand, 56157112 - 56156927
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    ||||||||||||| |||| || ||| || | ||||||||||||| |||||||||| ||||||||||||| ||| |||||| |||||||||||| |  | |    
T  56157112 aatggacatgcaaccaaacggctaatatcatatcaaaaattttaaacattaaaaaactaacggagggggtcaatttgattgacggagcaaaaccaaggag 56157013  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaatat 367  Q
    ||||||||||   |||||| | |||||||||||||||| ||||    ||||| |||| ||||||||  |||||||||||| |||||    
T  56157012 accaaaatgtgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaatatccaattaagccgaatat 56156927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 153 - 363
Target Start/End: Complemental strand, 52137631 - 52137422
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||| ||||||  ||||||||| || || |||||||||||||||||| ||||||||| | |||||||| |||||||||| |||| |||||||||  |       
T  52137631 ttagctgctgacggttcactat-aagtataatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattgaaaaactaacggagatgatg 52137533  T
Q  253 aaattgattaacggagcaaaac-aagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtc 351  Q
    || ||||   |||||| ||||| |||||| |||||||||||| |||||| | |||||||||||||||| |||||   ||||| |||||||||||||  ||    
T  52137532 aatttgaccgacggagtaaaaccaagagg-accaaaatgttggttttacaatttatgggaccaaaatgtaaacacataattatttagaggaccaaatatc 52137434  T
Q  352 caattaagccta 363  Q
    ||||||||||||    
T  52137433 caattaagccta 52137422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 1519893 - 1519809
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||| |||| ||||||||||||||||||||||    
T  1519893 gagggaccaatatgttgattttacgaattatgggaccaaaatgaaaacgacaaattagttaggggaccaaaagtccaattaagcc 1519809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 35350143 - 35350227
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||| ||| ||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  35350143 agggaccaaaacgttaattttacgagttatgagatcaaaatgaaaacaacaaattacttaggggaccaaaagtccaattaagcct 35350227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 47667381 - 47667291
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacg 243  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| | || ||||| ||||||||||||||| ||||||    
T  47667381 ttaggtgctgacggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacg 47667291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 363
Target Start/End: Original strand, 39057802 - 39057887
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||||| ||| |||||||||||||| |||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  39057802 agggaccaaaacgttaattttacgagttataggacaaaaataaaaacaacaaattacttaggggaccaaaagtccaattaagccta 39057887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 358
Target Start/End: Original strand, 26425784 - 26425880
Alignment:
Q  262 aacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaa 358  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||   ||||||||||| |||||||||| | ||||||    
T  26425784 aacggagcaaaacaagagagaccaaaatattgattttacgagttattgtaccaaaatgaaaactgaaaattacttaggggaccaaaagactaattaa 26425880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 26491514 - 26491430
Alignment:
Q  262 aacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaa 346  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||   |||||||||||||||||||    
T  26491514 aacggagcaaaataagagggaccaaaatgttgattttacgagttatgagaccaaaatataaactgaaaattacttagaggaccaa 26491430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 29665500 - 29665580
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||| |||| |||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||  ||||||||    
T  29665500 gttcacaattagatacaatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaattaacggag 29665580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 38554119 - 38554039
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| | |||||||| ||||||||||||||| |||| ||||    
T  38554119 gttcactattaaatacaatggacgtgcgatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaatggag 38554039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 41348442 - 41348354
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaa 241  Q
    ||||||| |||| ||||||  |||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||| ||||    
T  41348442 ttaggtggtgaaggttcaccgttaaatacaatggacatgcaatcaaatgattaaaatcatatcaaaaattttatacattaaaaaactaa 41348354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 3528393 - 3528300
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||| | || |||||  |||||||||||||| |||| ||||    
T  3528393 ttaggtgttgacggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaaattagacattaaaaaactaatggag 3528300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 363
Target Start/End: Complemental strand, 26495295 - 26495118
Alignment:
Q  186 gacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagagggacca 285  Q
    |||||||||||||| || ||| || | ||||||||||||| |||||||||| ||||||||||||  ||| |||| | |||||||||||| |  |||||||    
T  26495295 gacatgcaatcaaacggctaatatcatatcaaaaattttaaacattaaaaaactaacggaggggatcaatttgactgacggagcaaaaccaaggggacca 26495196  T
Q  286 aaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||   |||||| | |||| ||| ||||||| ||||    ||||| |||| ||||||||  | ||||||||||||    
T  26495195 aaatgtgagttttacaatttataggagcaaaatgtaaactcataattatttaggggaccaaatattcaattaagccta 26495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 324
Target Start/End: Complemental strand, 49895247 - 49895075
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| |||  ||||||||||| |||||| |||| |||||||||||||||| ||| | ||||||||  |||| |||||| || |||||||  | | ||    
T  49895247 ttaggtgttgatggttcactattagatacaacggacctgcaatcaaatggttagaatcaaatcaaaaaaattaggcattaagaaactaacggtagagacc 49895148  T
Q  253 aaattgattaacggagcaaaacaaga-gggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||||| | |||||||||||   || |||||||||||| | ||| ||  | |||||||||||||||||||||    
T  49895147 aaattgaatgacggagcaaaagttgaggggaccaaaatgataattatagaacttatgggaccaaaatgaaaac 49895075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 364
Target Start/End: Original strand, 36244706 - 36244888
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaa-caagagg 280  Q
    |||||||||||||||||| || ||| || | |||||| |||||| |||||||||| ||||||||||||  ||| |||| | ||||||||||| |||| ||    
T  36244706 aatggacatgcaatcaaacggctaatatcatatcaaacattttaaacattaaaaaactaacggaggggatcaatttgactgacggagcaaaatcaag-gg 36244804  T
Q  281 gaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    ||| |||||||   |||||| | |||||||| ||||||| ||||    ||||| || | ||||||||  |||||||||||||||    
T  36244805 gacaaaaatgtgagttttacaatttatgggatcaaaatgtaaactcataattattttggggaccaaatatccaattaagcctaa 36244888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 38554275 - 38554208
Alignment:
Q  3 ttattgattgttgttgatgatttctgaaatttttct-ggttttgtataaagattgacgacgctgatgt 69  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||    
T  38554275 ttattgattgttgttgatgatttctggaatttttctaggttttgtataaagattgatgaagctgatgt 38554208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 36845513 - 36845407
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgtt-gattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaa 354  Q
    |||||||||||||||||    |||| ||||||||||| ||||||| ||||||||| || ||||||||||||| || |||| |||  ||||||||||||||    
T  36845513 ttgattaacggagcaaacgttgaggaaccaaaatgtttgattttatgagttatggaactaaaatgaaaacaacaatttacctaggtgaccaaaagtccaa 36845414  T
Q  355 ttaagcc 361  Q
    |||||||    
T  36845413 ttaagcc 36845407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 56001196 - 56001271
Alignment:
Q  167 ttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacg 243  Q
    |||||||||| |||||||||||||||||||||||||||||||| | || |||||  |||||||||||||| ||||||    
T  56001196 ttcactattagatacaatggacatgcaatcaaatggttaaaatcacat-aaaaaaattagacattaaaaaactaacg 56001271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 307713 - 307811
Alignment:
Q  153 ttaggtgctgaaagttcactattaaata-----caatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||||||  |||||||||||||||     ||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||| | |||||||    
T  307713 ttaggtgctgacggttcactattaaatacaatacaatggacatgcaatcatatggttaaaatcatatcaaaaaatttaaacattaaaaaaccaacggag 307811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 26496346 - 26496435
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaatatat 369  Q
    ||||||||||||   |||||| | |||||||||||||||| |||||   ||||| ||||||||||||| |||||||||||||||| ||||    
T  26496346 ggaccaaaatgtgagttttacaatttatgggaccaaaatgtaaacacataattagttagaggaccaaatgtccaattaagcctaaaatat 26496435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 37106248 - 37106354
Alignment:
Q  241 acggagggggccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagag 340  Q
    ||||| ||| ||| ||||| | |||||||||||  | ||||||||||  ||||||||||  | ||||||||||||||| ||||||| |||||| |||| |    
T  37106248 acggaagggaccatattgactgacggagcaaaagcaaagggaccaaatcgttgattttagaacttatgggaccaaaataaaaacaacaaattagttaggg 37106347  T
Q  341 gaccaaa 347  Q
    |||||||    
T  37106348 gaccaaa 37106354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 46795792 - 46795846
Alignment:
Q  3 ttattgattgttgttgatgatttctgaaatttttctggttttgtataaagattga 57  Q
    |||||||||||||||||||||||||| |||||||  | |||||||||||||||||    
T  46795792 ttattgattgttgttgatgatttctggaattttttggattttgtataaagattga 46795846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 307576 - 307641
Alignment:
Q  3 ttattgattgttgttgatgatttctgaaatttttctggttttgtataaagattgacgacgctgatg 68  Q
    ||||| |||||||||||| ||||||| |||||||  ||||||||||||||||||| || |||||||    
T  307576 ttattaattgttgttgataatttctggaattttttgggttttgtataaagattgatgaagctgatg 307641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 44498563 - 44498486
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    |||| |||| ||||||||   |||||||||||||| |||||||| ||||||||||||||||| ||||||  |||||||    
T  44498563 ttgaataacagagcaaaagttgagggaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaatta 44498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 43418211 - 43418143
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||| |||||| ||||||||||||||| |||| | ||||||||| |||||||||||||  |||||||||    
T  43418211 atacgatggacttgcaatcaaatggttgaaatcaaatcaaaaatattagacattaaaatactaacggag 43418143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 43895555 - 43895623
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| | ||||||||  |||||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  43895555 atacaatagtcatgcaattgaatggttaaaattacatcaaaaatattagacattaaaaaattaacggag 43895623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 20827434 - 20827528
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatc--aaaaattttagacattaaaaagctaacgga 245  Q
    ||||||| |||  ||||||||||  ||| |||| || |||||||||||||||||||||| |||  |||||| ||  |||||||||||||||||||    
T  20827434 ttaggtgttgatggttcactattggatataatgaacttgcaatcaaatggttaaaattatatcagaaaaatattgaacattaaaaagctaacgga 20827528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 26376513 - 26376446
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaa 220  Q
    ||||||||| |  ||| ||||||| |||||||| ||||||||||||||||||||||| | ||||||||    
T  26376513 ttaggtgctcacggttaactattagatacaatgtacatgcaatcaaatggttaaaatcacatcaaaaa 26376446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 56085455 - 56085382
Alignment:
Q  251 ccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||||||| ||||| ||||||    |||||||||||||| |||||||| || ||||| |||||||||||||||    
T  56085455 ccaaattgaataacgaagcaaacattgagggaccaaaatgatgattttaagacttatgagaccaaaatgaaaac 56085382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 364
Target Start/End: Original strand, 56157509 - 56157617
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| ||| |||||||||| | ||||||||||||||   |||||| | |||||  ||||||||| ||||    ||||| |||||||||||||  ||||||    
T  56157509 ttgactaatggagcaaaaccaaagggaccaaaatgtgagttttacaatttatgaaaccaaaatgtaaacgcataattatttagaggaccaaatatccaat 56157608  T
Q  356 taagcctaa 364  Q
    |||||||||    
T  56157609 taagcctaa 56157617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 4872265 - 4872312
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||||||||| || |||||||| || |||||||||||||||||||||    
T  4872265 gagggaccaaattgatgattttaagacttatgggaccaaaatgaaaac 4872312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 20625556 - 20625623
Alignment:
Q  295 ttttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||| | |||||||||||||||| ||||    ||||| ||||||||||||| ||||||||||||||    
T  20625556 ttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagcct 20625623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 20620203 - 20620137
Alignment:
Q  295 ttttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||| | |||||||||||||||| ||||    ||||| ||||||||||||| |||||||||||||    
T  20620203 ttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaaggtccaattaagcc 20620137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 369
Target Start/End: Complemental strand, 36243622 - 36243509
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||| ||||||||| |  |||||||||||||   |||||| | |||| ||||||||||| ||||    ||||| |||| |||||||| |||||||    
T  36243622 ttgactaacagagcaaaactaaggggaccaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatgtccaat 36243523  T
Q  356 taagcctaatatat 369  Q
    |||| |||| ||||    
T  36243522 taagtctaaaatat 36243509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 2292320 - 2292264
Alignment:
Q  186 gacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    |||||||||||  |||||| |||||| ||||||||| |||| ||||||||| |||||    
T  2292320 gacatgcaatctgatggttgaaattatatcaaaaatattagtcattaaaaaactaac 2292264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 9791840 - 9791888
Alignment:
Q  311 accaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaag 359  Q
    |||||| ||||||||| |||| | |||||||||||||||| ||||||||    
T  9791840 accaaattgaaaacaacaaataaattagaggaccaaaagttcaattaag 9791888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 9e-65; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 153 - 361
Target Start/End: Original strand, 48528806 - 48529015
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggtt-aaaattagatcaaaaattttagacattaaaaagctaacggagggggc 251  Q
    ||||||| |||  ||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||| ||||||| |||||||| |||||||| ||| |    
T  48528806 ttaggtgttgacggttcactattaaatacaatggacatgcaatctaatggtttaaaatcaaatcaaaagttttagatattaaaaaactaacggatgggac 48528905  T
Q  252 caaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtc 351  Q
    |||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||||    
T  48528906 caaattgactaacggagaaaaataagagggactaaaatgttgattttacgagttatgggaccaaaatgtaaacaacaaattacttgggggaccaaaagtc 48529005  T
Q  352 caattaagcc 361  Q
    ||||||||||    
T  48529006 caattaagcc 48529015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 176 - 362
Target Start/End: Original strand, 12667208 - 12667394
Alignment:
Q  176 aaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaaca 275  Q
    ||||||||| |||||||||||||||| ||||||| | |||||||| ||| ||||||||||| |||||||||||| |||| |||| |||||||||||||||    
T  12667208 aaatacaatagacatgcaatcaaatgattaaaatcaaatcaaaaaatttcgacattaaaaaactaacggaggggaccaagttgactaacggagcaaaaca 12667307  T
Q  276 agagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||| ||||||| ||||||||| || | ||||||||||||||||    ||||| ||||||||| |||| |||||||||||||    
T  12667308 agagggaccgaaatgttaattttacgaattctaggaccaaaatgaaaactgataattatttagaggactaaaaatccaattaagcct 12667394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 176 - 361
Target Start/End: Original strand, 26287709 - 26287902
Alignment:
Q  176 aaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagg---------gggccaaattgattaacgg 266  Q
    ||||||| ||||||| |||||||||||||||||| | || |||||||| ||||||||||||  ||||||||          || ||||||||| ||||||    
T  26287709 aaatacattggacatacaatcaaatggttaaaatcaaataaaaaattt-agacattaaaaaattaacggagtaaaagttgaggaccaaattgactaacgg 26287807  T
Q  267 agcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    || ||||   |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  26287808 agtaaaagttgagggaccaaaatgttgattttacgaattatgggaccaaaatgaaaacaacaaattagttagaggaccaaaagtccaattaagcc 26287902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 153 - 324
Target Start/End: Original strand, 40533514 - 40533685
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||||||| ||  |||||||||||| |||||||||||||||||| |||||||||||| | ||||||| ||||||||||||||||  ||||||||||| ||    
T  40533514 ttaggtgccgacggttcactattaattacaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacggaggggacc 40533613  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
       |||| |||||||||||| | |||||||||||||||||| |||||| | |||||| ||||||||| ||||    
T  40533614 tttttgactaacggagcaaagcgagagggaccaaaatgttggttttacaatttatggaaccaaaatgtaaac 40533685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 48527615 - 48527527
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaata 366  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||    
T  48527615 agggaccaaaatgttaattttacgagttatgggaccaaaatgtaaacaacaaattacttaggggaccaaaaatccaattaagcctaata 48527527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 5611928 - 5611724
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag----------ggggccaaa 255  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||| | ||||| ||||| ||||||| ||||  ||||||||          ||| |||||    
T  5611928 gttcactgtaaaatacattggacatacaatcaaatggttaaaatcaaatcaagaattt-agacattgaaaaattaacggagtaaaagttgggggaccaaa 5611830  T
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    || | |||| ||| ||||   |||| ||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  5611829 tttactaacagagtaaaagttgaggcaccaaaatgttgattttacaaattatgggaccaaaatgaaaacaacaaattagttaaaggaccaaaagtccaat 5611730  T
Q  356 taagcc 361  Q
    ||||||    
T  5611729 taagcc 5611724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 358
Target Start/End: Original strand, 7306268 - 7306370
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||| ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||  | ||||||||||||||    
T  7306268 ttgactaacagaggaaaacaagagggaccaaaatgttaattttacgagttataggaccaaaatgaaaacaacaaattacttaaggaaccaaaagtccaat 7306367  T
Q  356 taa 358  Q
    |||    
T  7306368 taa 7306370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 360
Target Start/End: Original strand, 51446782 - 51446960
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    ||||||||||||||||||  |||||||| | |||||||| |||||| |||||||| ||||||||||||  ||| |||| | |||||||||||| |  |||    
T  51446782 aatggacatgcaatcaaacagttaaaatcatatcaaaaaatttagatattaaaaaactaacggaggggatcaatttgactgacggagcaaaaccaagggg 51446881  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagc 360  Q
    |||||||||| | |||||| | ||||| |||||||||| |||     ||||| ||||||||||||| ||||||||||||    
T  51446882 accaaaatgtgggttttacaatttatgtgaccaaaatgtaaatgcataattatttagaggaccaaatgtccaattaagc 51446960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 26286515 - 26286410
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| ||||||||||||    |||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||| |||| ||||||||||||||||    
T  26286515 ttgactaacggagcaaacgttgagggaccaatatgttgattttacgaattatgggaccaaaatgaaaacgacaaattagttaggggaccaaaagtccaat 26286416  T
Q  356 taagcc 361  Q
    ||||||    
T  26286415 taagcc 26286410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 362
Target Start/End: Original strand, 14479454 - 14479634
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||||||||||||||| || ||| || | |||||||||||||  ||||||||| ||||||||||||  ||| |||| | | |||||||||| |  |||    
T  14479454 aatggacatgcaatcaaacggctaatataatatcaaaaattttaatcattaaaaaactaacggaggggatcaatttgactgatggagcaaaaccaagggg 14479553  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||   |||||| | |||||||||||||||| ||||    ||||| |||| |||||||| ||||||||||||||    
T  14479554 accaaaatgtgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaatgtccaattaagcct 14479634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 363
Target Start/End: Original strand, 5613098 - 5613205
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| ||||||||||||    |||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||| |||| ||| ||||||||||||    
T  5613098 ttgactaacggagcaaacgttgagggaccaatatgttgattttacgaattatgggaccaaaatgaaaacgacaaattagttaggggatcaaaagtccaat 5613197  T
Q  356 taagccta 363  Q
    ||||||||    
T  5613198 taagccta 5613205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 7304904 - 7304810
Alignment:
Q  267 agcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||| |||||| || | | ||||| ||||||||||||||    
T  7304904 agcaaaataagagggaccaaaatattgattttacgagttatgggatcacaatgaaaacaacaaattatttcgggaaccaagagtccaattaagcc 7304810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 12665894 - 12665788
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||    |||||||||| ||||||||| || |||    
T  12665894 ttgactaacgaagcaaaataagagggaccgaaatgttgattttacgaattatgggaccaaaataaaaactgataattacttaggggaccaaaaatcaaat 12665795  T
Q  356 taagcct 362  Q
    |||||||    
T  12665794 taagcct 12665788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 26803129 - 26803211
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaa 235  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||    
T  26803129 ttaggtggtgaaggttcactgttaaatacaatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaa 26803211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 40110565 - 40110654
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    ||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||| |||||    
T  40110565 ttaggtggtgaaggttcaccgttaaatacaatggacatgcaatcaaatggttaaaatcatatcaataattttatacattaaaaaactaac 40110654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 24516516 - 24516422
Alignment:
Q  174 ttaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggag 268  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||| ||||| | |||| ||| ||| || |||||||    
T  24516516 ttaaatacaatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaaaactaacaggggggaccacattaataaacggag 24516422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 324
Target Start/End: Complemental strand, 6048123 - 6047954
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| |||  ||||||||||| ||||||||||| | |||||||||||||| ||| | |||||||| ||||| ||||||||| || ||||  | | ||    
T  6048123 ttaggtgttgatggttcactattagatacaatggacctccaatcaaatggttagaatcaaatcaaaaaatttaggcattaaaaacct-acggtagagacc 6048025  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||||| | |||||||||||   || ||||||||||| | ||| || || ||||||||||||||| |||||    
T  6048024 aaattgaatgacggagcaaaagttga-ggaccaaaatgataattataggacttatgggaccaaaattaaaac 6047954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 324
Target Start/End: Complemental strand, 52076722 - 52076566
Alignment:
Q  168 tcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacgga 267  Q
    ||||||||| | ||||| ||||||||||||||||||||||||   ||||  ||| ||| | |||||||  ||||||| | || |||||| || |||||||    
T  52076722 tcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacggtgaggaccaaatcgaataacgga 52076623  T
Q  268 gcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||||    |||||||||||||| |||||||  || | |||||||||||| ||||||    
T  52076622 gcaaacgttgagggaccaaaatgatgatttttggactaatgggaccaaaacgaaaac 52076566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 367
Target Start/End: Complemental strand, 18819058 - 18818968
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaatat 367  Q
    ||||||| ||||| |||||||||||| ||||||||||| |||||||||   |||||| ||| |||| |||||| ||||||||||| |||||    
T  18819058 gagggactaaaatattgattttacgatttatgggaccataatgaaaactgaaaattaattaaaggatcaaaagaccaattaagccaaatat 18818968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 364
Target Start/End: Complemental strand, 28050424 - 28050316
Alignment:
Q  256 ttgattaacggagcaaaa-caagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaa 354  Q
    |||| ||||||||||||| |||| ||||||||||||| |||||||| | |||||||||||||||| |||||   ||||| |||  |||||||| ||| ||    
T  28050424 ttgactaacggagcaaaatcaag-gggaccaaaatgtggattttacaatttatgggaccaaaatgtaaacacataattatttaagggaccaaatgtctaa 28050326  T
Q  355 ttaagcctaa 364  Q
    ||||||||||    
T  28050325 ttaagcctaa 28050316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 364
Target Start/End: Original strand, 18821773 - 18821860
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    |||||||| ||| |||||||||||||||| || || ||||||||||||   || ||| ||||||||||||||| |||| |||||||||    
T  18821773 gagggaccgaaacgttgattttacgagttgtgagatcaaaatgaaaactgaaagttaattagaggaccaaaagaccaaataagcctaa 18821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 51217794 - 51217728
Alignment:
Q  180 acaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||| ||||||||||| ||||||| |||||| ||||||||| |||| ||||||||| |||||||||    
T  51217794 acaatagacatgcaatctaatggttgaaattatatcaaaaatattagtcattaaaaaactaacggag 51217728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 48492786 - 48492727
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||| ||  |||||||||    
T  48492786 agttatgggaccaaaatgaaaacaacaaataagttagaggaccaaaggtttaattaagcc 48492727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 51445669 - 51445587
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||||   |||||| | |||||||||||||||| ||||    ||||| ||||||||||||| ||||||||||||||    
T  51445669 ggaccaaaatgtgagttttacaatttatgggaccaaaatgtaaacgcataattatttagaggaccaaatgtccaattaagcct 51445587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 9482536 - 9482471
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggacca 345  Q
    |||||||||||||||||||||||| |||| ||| ||||| |||||  ||||||| |||| ||||||    
T  9482536 ggaccaaaatgttgattttacgagatatgtgactaaaataaaaactggaaattaattaggggacca 9482471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 14478345 - 14478264
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||||   |||||| | |||||||| ||||||| |||||   ||||| ||||||||||||| |||||||||||||    
T  14478345 ggaccaaaatgtgagttttacaatttatgggatcaaaatgtaaacacataattatttagaggaccaaatgtccaattaagcc 14478264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 6049432 - 6049505
Alignment:
Q  251 ccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||||||| ||||| ||||||    |||||||||||||| |||||||| || ||||| ||||||||| |||||    
T  6049432 ccaaattgaataacgtagcaaacgttgagggaccaaaatgatgattttaggacttatgagaccaaaataaaaac 6049505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 14429808 - 14429743
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaatat 367  Q
    ||||||| ||||||||||||||||| |||| | || | |||||||| || ||||||| ||||||||    
T  14429808 agttatgagaccaaaatgaaaacaacaaataagttcggggaccaaaggttcaattaaacctaatat 14429743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 26055087 - 26055010
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacg 243  Q
    ||||||||||  ||| ||| ||| ||||||| ||||||| |||||| |||| |||| || ||||||||||| ||||||    
T  26055087 gttcactattgtatataatagacctgcaatctaatggttgaaattatatcataaatatttgacattaaaaaactaacg 26055010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 49139988 - 49139911
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||||||| ||||||| | |||||||||| || |||| | ||  ||||| ||| |||||||||| |||||||||    
T  49139988 cactattaaatataatggaccttcaatcaaatgattgaaataatatataaaatattaaacattaaaaaactaacggag 49139911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 50679734 - 50679827
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| ||| |||||| | ||  |||||||| || | |||||||| |||| |||  | |||||||| ||||||||||||||| |||||||||    
T  50679734 ttaggtgttgatagttcagtgttgtatacaatgaacctacaatcaaacggttgaaaacatatcaaaaaatttagacattaaaaaactaacggag 50679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 9210073 - 9210125
Alignment:
Q  192 caatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacgg 244  Q
    ||||||||||||| |||||| ||||| ||| | |||||||||||| |||||||    
T  9210073 caatcaaatggttgaaattatatcaagaatataagacattaaaaaactaacgg 9210125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 15746827 - 15746887
Alignment:
Q  304 ttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    ||||||||||||||||||||   ||||||| |||| |||||||| | || |||||||||||    
T  15746827 ttatgggaccaaaatgaaaattggaaattaattaggggaccaaatgacctattaagcctaa 15746887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 33941483 - 33941431
Alignment:
Q  190 tgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    |||||||||| ||||||||| | || |||||| |||||||||||||| |||||    
T  33941483 tgcaatcaaacggttaaaatcatattaaaaatgttagacattaaaaaactaac 33941431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 153 - 364
Target Start/End: Complemental strand, 7100 - 6890
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| |||  ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||| ||| |||| |||||||||||  |     
T  7100 ttaggtgttgacggttcactattaaatataatggacatgcaatcaaacggttaaaattatatcaaaaaatttagatattgaaaaactaacggagggatc- 7002  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    || ||||   |||||||||||| | ||| |||||||||||| |||||| | |||||||||||||||| |||||   ||||| ||||||||||||| ||||    
T  7001 aatttgaccgacggagcaaaaccaaaggaaccaaaatgttggttttacaatttatgggaccaaaatgtaaacacataattatttagaggaccaaatgtcc 6902  T
Q  353 aattaagcctaa 364  Q
    ||||||||||||    
T  6901 aattaagcctaa 6890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 8199 - 8309
Alignment:
Q  252 caaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtc 351  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||     
T  8199 caaattgactaacggagtaaaacgagagggaccaaaatgttgattttacgagttatgggaccaaaatgtaaacaaagaattacttaggggaccaaaagtt 8298  T
Q  352 caattaagcct 362  Q
    |||||||||||    
T  8299 caattaagcct 8309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 153 - 323
Target Start/End: Original strand, 18242220 - 18242390
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||||||||||| |     
T  18242220 ttaggtgatgatggttcactataaaatacaatggacatgcaatcaaatggttaaaattaaattaaaaatttaagacattaaaaaactaacggaggggacg 18242319  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaa 323  Q
    ||||||| ||| |||||||||   ||||||||||| || |||||||| || ||||||||||| ||| ||||    
T  18242320 aaattgaataatggagcaaaagttgagggaccaaattgatgattttaagacttatgggaccagaataaaaa 18242390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 169 - 361
Target Start/End: Original strand, 138132 - 138324
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggag 268  Q
    ||||||||| ||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||||  |||||||||||  ||| ||||  ||||| |    
T  138132 cactattaactacaatggacatgcaatcggatggttaaaattacatcaaaaagtttagacattaaaaaaataacggaggggatcaatttgaccaacggtg 138231  T
Q  269 caaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
      |      ||||||| ||| ||||||||||  ||||||||||||||||||||||||  |||||| |||| |||||||||||| |||||||||    
T  138232 acatttgtaagggaccgaaacgttgattttagaagttatgggaccaaaatgaaaacatcaaattagttaggggaccaaaagtcaaattaagcc 138324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 169 - 361
Target Start/End: Original strand, 146153 - 146345
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggag 268  Q
    ||||||||| ||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||||  |||||||||||  ||| ||||  ||||| |    
T  146153 cactattaactacaatggacatgcaatcggatggttaaaattacatcaaaaagtttagacattaaaaaaataacggaggggatcaatttgaccaacggtg 146252  T
Q  269 caaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
      |      ||||||| ||| ||||||||||  ||||||||||||||||||||||||  |||||| |||| |||||||||||| |||||||||    
T  146253 acatttgtaagggaccgaaacgttgattttagaagttatgggaccaaaatgaaaacatcaaattagttaggggaccaaaagtcaaattaagcc 146345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 11968486 - 11968594
Alignment:
Q  252 caaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtc 351  Q
    |||||||| ||||  |||||||||| ||||||||||| ||| |||||||  |||||| ||||||||||||||||| |||||| |||| ||||||||| ||    
T  11968486 caaattgactaacaaagcaaaacaaaagggaccaaaacgttaattttacaggttatgagaccaaaatgaaaacaacaaattagttaggggaccaaaaatc 11968585  T
Q  352 caattaagc 360  Q
    |||||||||    
T  11968586 caattaagc 11968594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 30231559 - 30231475
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||    
T  30231559 agggaccaaaacgttgattttagaagttatgggaccaaaatgaaaacaacaaattagttaagggaccaaaagtccaattaagcct 30231475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 153 - 364
Target Start/End: Original strand, 30232817 - 30233027
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    ||||||| |||  ||||||||| || ||||||||||||||||||  ||||||||||||| || ||||| |||||||||||||||  ||||  ||||   |    
T  30232817 ttaggtgatgacggttcactat-aactacaatggacatgcaatcggatggttaaaattatataaaaaagtttagacattaaaaaaataacatagggaatc 30232915  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtcc 352  Q
    || |||| | || | |  |      ||||||| ||| ||||||||||  ||||||||||||||||||||||||| ||| || |||| |||||||||||||    
T  30232916 aatttgacttacagtgacatttgtaagggaccgaaacgttgattttagaagttatgggaccaaaatgaaaacaacaaactagttaggggaccaaaagtcc 30233015  T
Q  353 aattaagcctaa 364  Q
    ||||||||||||    
T  30233016 aattaagcctaa 30233027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 136708 - 136623
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||||| ||||||||||  ||||||||||| ||||| ||||||| |||||| |||| |||| |||||||||||||||||||    
T  136708 agggaccaaaacgttgattttaaaagttatgggactaaaataaaaacaacaaattagttaggggacgaaaagtccaattaagccta 136623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 35037208 - 35037129
Alignment:
Q  284 caaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||| |||||||||| |||||||| |||||||||||||||   |||||| ||||||||||||||  |||||||||||||    
T  35037208 caaaacgttgattttatgagttatgagaccaaaatgaaaactgaaaattaattagaggaccaaaaaaccaattaagccta 35037129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 11967326 - 11967249
Alignment:
Q  281 gaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaa 358  Q
    ||||||||  ||||||||| ||||||||  |||||||||||||||| |||||| |||| ||||||||||| |||||||    
T  11967326 gaccaaaacattgattttatgagttatgaaaccaaaatgaaaacaacaaattaattaggggaccaaaagtacaattaa 11967249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 11968400 - 11968453
Alignment:
Q  176 aaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagaca 229  Q
    ||||| ||| |||||||||||||||||||||||| | |||||||||||||||||    
T  11968400 aaatataatagacatgcaatcaaatggttaaaatcaaatcaaaaattttagaca 11968453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 11722882 - 11722777
Alignment:
Q  263 acggagcaaaac-aagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||||| |||||| ||||||||||   |||||| | |||||||| ||||||| |||||   ||||| |||||||| |||| |||||||||||||    
T  11722882 acggagcaaaaccaagagg-accaaaatgtgagttttacaatttatgggatcaaaatgtaaacacataattatttagaggatcaaatgtccaattaagcc 11722784  T
Q  362 taatata 368  Q
     ||||||    
T  11722783 aaatata 11722777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 18773832 - 18773755
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||||| ||||||||||| |||||||||||| | ||||||||  | |||||||||||| ||||| ||| || |||||    
T  18773832 atacaatagacatgcaatcgaatggttaaaatcatatcaaaaacatcagacattaaaaaactaacagagaggaccaaa 18773755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 29675664 - 29675589
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacgg 244  Q
    |||||||| ||||||||||| ||||||| | |||||||||| | |||| | || ||| |||||||||| |||||||    
T  29675664 cactattagatacaatggacctgcaatccagtggttaaaatcacatcatacatattatacattaaaaaactaacgg 29675589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 8695194 - 8695122
Alignment:
Q  292 tgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    ||||||||  |||||||||||||||| ||||||||  ||||| |||  ||||||||||  ||||| |||||||    
T  8695194 tgattttagaagttatgggaccaaaacgaaaacaaagaattagttaagggaccaaaaggtcaatttagcctaa 8695122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 37416451 - 37416556
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||| |||||    
T  37416451 ttgactaacggagcaaaacaagagggaccaaaatgttgattttatgagttatggaaccaaaatgaaaacaacaaattacttaggggaccaaaaggccaat 37416550  T
Q  356 taagcc 361  Q
    ||||||    
T  37416551 taagcc 37416556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 157 - 323
Target Start/End: Original strand, 10301732 - 10301898
Alignment:
Q  157 gtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaat 256  Q
    |||||||  ||||||| ||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||| ||||| ||||   ||||||    
T  10301732 gtgctgatggttcactgttaaatacaatggacattcaatcaaatggttaaaatcaaatcaaaaaatttagacattaaaaaactaacagaggacaccaaat 10301831  T
Q  257 tgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaa 323  Q
    ||| |||||||||||||   || |||||| | || |||||||| || ||||||||||||||||||||    
T  10301832 tgactaacggagcaaaagttgaaggaccatattgatgattttaagacttatgggaccaaaatgaaaa 10301898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 7271518 - 7271624
Alignment:
Q  167 ttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacgg 266  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |  |||||| ||||||    
T  7271518 ttcactataaaatacaatggacatgcaatcaaatggttaaaattaaatcaaaaagtttagacattaaaaaactaacggaggggacggaattgaataacgg 7271617  T
Q  267 agcaaaa 273  Q
    |||||||    
T  7271618 agcaaaa 7271624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 256 - 358
Target Start/End: Complemental strand, 37415098 - 37414996
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||  |||||||||||| |||    
T  37415098 ttgactaacggagcaaaacaagaggaaccaaaatgttgattttacgagttatgagaccaaaatgaaaataacaaattacttaagggaccaaaagtctaat 37414999  T
Q  356 taa 358  Q
    |||    
T  37414998 taa 37414996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 48253136 - 48253043
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  48253136 ttaggtgttgacagttcactattagatacaatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaactaacggag 48253043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 53809406 - 53809499
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||||||   |||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  53809406 ttaggtgctgacgattcactgttaaatacaatagacatgcaatcaaatggttaaaattatatcaaaaaatttagacattaaaaaactaacggag 53809499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 47766864 - 47766954
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacg 243  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| | || ||||| ||||||||||||||| ||||||    
T  47766864 ttaggtgctgacggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacg 47766954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 10339906 - 10339995
Alignment:
Q  157 gtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    |||||||  ||||||| ||||||||||||||||| ||||||||||||| |||| | |||||||| ||||||||||||||| |||||||||    
T  10339906 gtgctgacggttcactgttaaatacaatggacattcaatcaaatggttcaaatcaaatcaaaaaatttagacattaaaaaactaacggag 10339995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 362
Target Start/End: Original strand, 49380893 - 49381073
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||||||||||||||| || ||| || | ||||||||||||| |||||||||| ||||||||||||  ||| |||| | |||||||||||| |  ||     
T  49380893 aatggacatgcaatcaaacggctaatatcatatcaaaaattttaaacattaaaaaactaacggaggggatcaatttgactgacggagcaaaaccaagggt 49380992  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||||| |   |||||| | |||| ||||||||||| ||||    ||||| |||| ||||||||  |||||||||||||    
T  49380993 accaaaatatgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatatccaattaagcct 49381073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 13621897 - 13622076
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaa-caagagg 280  Q
    |||||||||||||||||| || ||| || | ||||||||||||| | |||||||| ||||| ||||||  ||| |||| | ||| ||||||| |||| ||    
T  13621897 aatggacatgcaatcaaacggctaatatcatatcaaaaattttaaatattaaaaaactaactgaggggatcaatttgactgacgaagcaaaatcaag-gg 13621995  T
Q  281 gaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||||   |||||| | |||| ||||||||||| ||||    ||||| |||| |||||||| |||||||||||||    
T  13621996 gaccaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatgtccaattaagcc 13622076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 14745213 - 14745281
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||    
T  14745213 ttgactaactgagcaaaacaagagggaccaaaacgttgactttacgagttatgggaccaagatgtaaac 14745281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 324
Target Start/End: Complemental strand, 14744268 - 14744098
Alignment:
Q  153 ttaggtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggcc 252  Q
    |||||||||||  ||||||||| |  || |||||||||||||||||  ||||||||| | |||||||| |||||||||||||||  ||||||||  |  |    
T  14744268 ttaggtgctgatggttcactat-atgtataatggacatgcaatcaatcggttaaaatcatatcaaaaaatttagacattaaaaaattaacggagatgatc 14744170  T
Q  253 aaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    || |||| |||||||||||||| |  |  ||||||||||   |||||| | ||||| |||||||||| ||||    
T  14744169 aatttgactaacggagcaaaaccaatgaaaccaaaatgtgagttttacaatttatgagaccaaaatgtaaac 14744098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 26797497 - 26797421
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaa 254  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||| |||  ||||| ||| ||||||||| |||||||    
T  26797497 atacaatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattagaaaactaacggagagggccaa 26797421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 34123348 - 34123241
Alignment:
Q  214 tcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggacc 313  Q
    ||||||| |||||||||| |||| |||||||||||| |||| |||| |||||||| ||||   || |||||||| ||||||||||  |||||||| |||     
T  34123348 tcaaaaaatttagacattgaaaaactaacggaggggaccaagttgaataacggagaaaaagttga-ggaccaaagtgttgattttttgagttatgagact 34123250  T
Q  314 aaaatgaaa 322  Q
    |||||||||    
T  34123249 aaaatgaaa 34123241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 54750369 - 54750448
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||| | |||||||| |||||||||||||||  ||||||||    
T  54750369 gttcactgtaaaatacattggacatacaatcaaatggttaaaatcaaatcaaaaa-tttagacattaaaaaattaacggag 54750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 17345488 - 17345411
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||||| ||||||||||| ||||||| |||| | || |||||| |||||||||||||| ||||||||| || |||||    
T  17345488 atacaatagacatgcaatcgaatggttcaaatcatattaaaaatattagacattaaaaaactaacggagaggaccaaa 17345411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 7270405 - 7270349
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaatta 333  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||  |||||||    
T  7270405 gagggaccaaaatgttgattttaagacttatgggacaaaaatgaaaactggaaatta 7270349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 20486198 - 20486122
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    ||||||| ||| ||||| | ||| |||||||||||| ||||||| | || |||| |||||||||||||||| |||||    
T  20486198 gttcactgttatatacagtcgacctgcaatcaaatgattaaaatcatattaaaagttttagacattaaaaaactaac 20486122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 25585759 - 25585839
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||||||  ||| ||||||  ||||||| ||||||| |||| | |||| |||| |||||||||||||| |||||||||    
T  25585759 gttcactattgtatataatggatctgcaatcgaatggttcaaatcatatcagaaatgttagacattaaaaaactaacggag 25585839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 10338820 - 10338773
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||||||||||||| ||||||||  | |||||||||||||||||||||    
T  10338820 gagggaccaaaatgatgattttaaaatttatgggaccaaaatgaaaac 10338773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 45422103 - 45422166
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaa 241  Q
    ||||||| ||| ||||||||||||||||| || | ||||| ||| |||||||||||||| ||||    
T  45422103 atacaatagacctgcaatcaaatggttaatatcatatcaagaatattagacattaaaaaactaa 45422166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 48084671 - 48084718
Alignment:
Q  173 attaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaa 220  Q
    |||||||||||||||||| ||||| |||||||||||| | ||||||||    
T  48084671 attaaatacaatggacattcaatcgaatggttaaaatcaaatcaaaaa 48084718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 3817325 - 3817367
Alignment:
Q  305 tatgggaccaaaatgaaaacaagaaattacttagaggaccaaa 347  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||    
T  3817325 tatgggaccaaaatgaaaacatgaaattagttaggggaccaaa 3817367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 7921595 - 7921649
Alignment:
Q  192 caatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||| ||||||| |||| | ||||||||| |||||||||||||| |||||||||    
T  7921595 caatcgaatggttgaaatcatatcaaaaatattagacattaaaaaactaacggag 7921649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 40896683 - 40896749
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacgg 244  Q
    ||||||||||| | ||||||| |||||||||| | |||| |||| ||| |||||||||| |||||||    
T  40896683 atacaatggacctacaatcaagtggttaaaatcacatcataaatattatacattaaaaaactaacgg 40896749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 11220600 - 11220673
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||||| ||||||  ||||||| |||||| |||| |||| || ||||||||||| | |||||||||| |||||    
T  11220600 aatggacctgcaatataatggttgaaattatatcataaatatttgacattaaaaaacaaacggaggggaccaaa 11220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 13621016 - 13620916
Alignment:
Q  263 acggagcaaaac-aagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||||| |||||| ||||||||||   |||||| | ||||| |||||||||| ||||    ||||| ||||||||||||| ||| |||||||||    
T  13621016 acggagcaaaaccaagagg-accaaaatgtgagttttacaatttatgagaccaaaatgtaaacgcataattatttagaggaccaaatgtcaaattaagcc 13620918  T
Q  362 ta 363  Q
    ||    
T  13620917 ta 13620916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 40241759 - 40241827
Alignment:
Q  295 ttttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    ||||| |||||||||||||||||||||||||| |||| | | ||||||  |||| | |||||||||||||    
T  40241759 ttttaagagttatgggaccaaaatgaaaacaacaaataagtcagaggataaaaaat-caattaagcctaa 40241827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 53612926 - 53612897
Alignment:
Q  304 ttatgggaccaaaatgaaaacaagaaatta 333  Q
    ||||||||||||||||||||||||||||||    
T  53612926 ttatgggaccaaaatgaaaacaagaaatta 53612897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 10730940 - 10730912
Alignment:
Q  304 ttatgggaccaaaatgaaaacaagaaatt 332  Q
    |||||||||||||||||||||||||||||    
T  10730940 ttatgggaccaaaatgaaaacaagaaatt 10730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 21515450 - 21515410
Alignment:
Q  169 cactattaaatacaatggacatgcaatcaaatggttaaaat 209  Q
    |||||||| ||||||||||| ||||||||| ||||||||||    
T  21515450 cactattagatacaatggacctgcaatcaagtggttaaaat 21515410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 165 - 345
Target Start/End: Complemental strand, 19397724 - 19397544
Alignment:
Q  165 agttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaac 264  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||  ||||||| ||| ||    ||| ||||    
T  19397724 agttcactattaattacaatggacatgcaatccaatggttaaaattatatcaaaagttttagacattaaaaaaataacggaagggacctttatgactaac 19397625  T
Q  265 ggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggacca 345  Q
    |||||||||| |||||||||||||||||  |||||  | |||||||||||||||| ||||  | ||||| |||| ||||||    
T  19397624 ggagcaaaacgagagggaccaaaatgttagttttaaaatttatgggaccaaaatgtaaactggtaattatttaggggacca 19397544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 166 - 361
Target Start/End: Complemental strand, 1147942 - 1147747
Alignment:
Q  166 gttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacg 265  Q
    |||||||||||| || |||||||||||||||  ||||||||||| | |||||||| |||||||||||||||  |||||||||||  ||| |||| |||||    
T  1147942 gttcactattaactagaatggacatgcaatcggatggttaaaatcatatcaaaaagtttagacattaaaaaaataacggaggggatcaatttgactaacg 1147843  T
Q  266 gagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    | |  |      ||||||| ||| ||||||||||  ||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  1147842 gtgatatttgtaagggaccgaaacgttgattttagaagttatgggactaaaatgaaaacaacaaattagttaggggaccaaaagtccaattaagcc 1147747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 1309487 - 1309396
Alignment:
Q  270 aaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  1309487 aaaacaagagggaccaaaatgttaattttacgagttatatgactaaaatgaaaacaacaaattacttaggggaccaaaaatccaattaagcc 1309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 4920004 - 4919825
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||||||||||||||| ||||||||| | |||||||| ||||||  ||||||| |||| |||||||  ||| |||| | |||||||||||| |  |||    
T  4920004 aatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagatgttaaaaaactaatggaggggatcaatttgactgacggagcaaaaccaagggg 4919905  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||| |||||||  | ||||||||||||| || |||     ||||| ||||||||||||| |||||||||||||    
T  4919904 accaaaatgtggattttataatttatgggaccaaattgtaaatgcataattatttagaggaccaaatgtccaattaagcc 4919825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 363
Target Start/End: Complemental strand, 28610199 - 28610018
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||| ||||||||||||| || ||| || | ||||||||||||| |||||||||| |||||||| |||  ||| |||| | |||||||||||| |  |||    
T  28610199 aatgaacatgcaatcaaacggctaatatcatatcaaaaattttaaacattaaaaaactaacggatgggatcaatttgactgacggagcaaaaccaagggg 28610100  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagccta 363  Q
    ||||||||||  ||||||| | |||||||||||||||| ||||    ||||| ||||  ||||||| |||||||||||||||    
T  28610099 accaaaatgtgaattttacaatttatgggaccaaaatgtaaactcataattatttaggtgaccaaatgtccaattaagccta 28610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 1149223 - 1149307
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  1149223 agggaccaaaacgttgattttagaagttatgggaccaaaatgaaaacaacaaattagttaggggaccaaaagtccaattaagcct 1149307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 1310681 - 1310786
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaat 355  Q
    |||| ||||| | |||||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||| | |||||   ||||||||    
T  1310681 ttgactaacgaaacaaaacgagagggaccaaaatgttgattttacgagttatgagattaaaatgaaaacaacaaattacttcggggaccttgagtccaat 1310780  T
Q  356 taagcc 361  Q
    ||||||    
T  1310781 taagcc 1310786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 19398818 - 19398926
Alignment:
Q  261 taacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagc 360  Q
    ||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||| ||||  | ||||| |||| | |||||||| |||||||||     
T  19398818 taacggagcaaaacaagagggaccaaaatgtaggttttacaatttatgggaccaaaatgtaaaccggtaattatttagggaaccaaaagaccaattaagt 19398917  T
Q  361 ctaatatat 369  Q
    |||| ||||    
T  19398918 ctaaaatat 19398926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 45699705 - 45699569
Alignment:
Q  183 atggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggga 282  Q
    |||||||||||||||||  |||||||| | |||||||| |||||| |||||||| |||| |||||||| ||| |||| | |||||||||||| | |||||    
T  45699705 atggacatgcaatcaaacagttaaaatcatatcaaaaaatttagatattaaaaaactaatggagggggtcaatttgactgacggagcaaaaccaaaggga 45699606  T
Q  283 ccaaaatgttgattttacgagttatgggaccaaaatg 319  Q
    | |||||||   |||||| | |||||| |||||||||    
T  45699605 ctaaaatgtgagttttacaatttatggaaccaaaatg 45699569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 8320833 - 8320776
Alignment:
Q  308 gggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaat 365  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  8320833 gggaccaaaatgtaaacaagaaattacttaggggaccaaaagtccaattaagcctaat 8320776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 16289966 - 16289812
Alignment:
Q  170 actattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagc 269  Q
    ||||| |||||||| |||||||| ||||||||  |||||| | || ||||||||||||||||||||| |||| ||||||| |||||||||  |  | |||    
T  16289966 actataaaatacaacggacatgcgatcaaatgagtaaaatcaaataaaaaattttagacattaaaaaactaatggaggggtccaaattgaaaactgtagc 16289867  T
Q  270 aaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    ||||   ||| ||  ||| | || ||||| ||||||||| |||||||||||||||    
T  16289866 aaaagttgagagattaaagtattaatttttcgagttatgagaccaaaatgaaaac 16289812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 40559144 - 40559228
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||||||| | |||||||||  | ||||||||||||||||||||||| |||||| |||||||||||||  || ||||||||||    
T  40559144 agggaccaaattattgattttagaacttatgggaccaaaatgaaaacaacaaattagttagaggaccaaatatcgaattaagcct 40559228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 102414 - 102475
Alignment:
Q  301 gagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |  |||||||||||    
T  102414 gagttatgggaccaaaatgaaaacaagaaattagttaggggaccaaatgatcaattaagcct 102475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 23233709 - 23233776
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaa 323  Q
    |||| |||||||||||||   |||||||||||||| |||||||| || ||||||||||||||||||||    
T  23233709 ttgaataacggagcaaaagttgagggaccaaaatgatgattttaagacttatgggaccaaaatgaaaa 23233776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 40557021 - 40556938
Alignment:
Q  278 agggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||  ||||||||||  | ||||| ||||||||||||||||| |||||| |||||||||||||  || |||||||||    
T  40557021 agggaccaaatcgttgattttagaacttatgagaccaaaatgaaaacaacaaattaattagaggaccaaatatcaaattaagcc 40556938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 9473984 - 9474058
Alignment:
Q  175 taaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggg 249  Q
    |||| ||||||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||  ||| |||||||    
T  9473984 taaacacaatggacatgcaatcgaatagttaaaattatatcaaaaatattaaacattaaaaatttaatggagggg 9474058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 263 - 361
Target Start/End: Complemental strand, 25559378 - 25559280
Alignment:
Q  263 acggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||||  | ||||||||||  ||||||||||  | ||||||||||||||| ||||||| |||||| |||| ||||||||  || |||||||||    
T  25559378 acggagcaaaagcaaagggaccaaatcgttgattttagaacttatgggaccaaaataaaaacaacaaattagttaggggaccaaatatcgaattaagcc 25559280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 44833240 - 44833202
Alignment:
Q  433 actaattgtcttatgaggaatgtactgataggactgatt 471  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44833240 actaattgtcttatgaggaatgtactgataggactgatt 44833202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 6707100 - 6707027
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||||| ||||||| ||||||| |||||| |||| |||| || ||||||||||| |||||||||||| |||||    
T  6707100 aatggacctgcaatctaatggttgaaattatatcataaatatttgacattaaaaaactaacggaggggaccaaa 6707027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 28611272 - 28611372
Alignment:
Q  263 acggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    |||||||||||| | | |||||||||| |  ||||||| | |||||||||||||||| ||||    ||||| |||||||||||||  |||||||||||||    
T  28611272 acggagcaaaaccaaaaggaccaaaatatgaattttacaatttatgggaccaaaatgtaaacgcataattatttagaggaccaaatatccaattaagcct 28611371  T
Q  363 a 363  Q
    |    
T  28611372 a 28611372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 2717720 - 2717783
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacatt-aaaaagctaacgg 244  Q
    ||||||| |||||||||||||||||||| |||||| |||| ||| ||||| |||||||||||||    
T  2717720 aatggacgtgcaatcaaatggttaaaatcagatcagaaatattaaacattaaaaaagctaacgg 2717783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 25561681 - 25561780
Alignment:
Q  265 ggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaa 364  Q
    |||||||||  | ||||||||||  ||||||||||  | ||||||||||||||||||||||| |||||| ||||  |||||||  || ||||| ||||||    
T  25561681 ggagcaaaagcaaagggaccaaatcgttgattttagaatttatgggaccaaaatgaaaacaacaaattagttaggcgaccaaatatcgaattacgcctaa 25561780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 25569968 - 25569883
Alignment:
Q  157 gtgctgaaagttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaac 242  Q
    |||||||  ||||||| |||||||| || ||||||||||||| |||||||||| | ||||| |||  || |||||||||| |||||    
T  25569968 gtgctgatggttcactcttaaatactatagacatgcaatcaagtggttaaaatgatatcaagaataatatacattaaaaaactaac 25569883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 26205985 - 26206062
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    ||||||| ||||||||||| ||||||| |||||| ||  ||||| |||| ||||||||| ||||||||| || |||||    
T  26205985 atacaatagacatgcaatcgaatggttgaaattatatataaaatattagtcattaaaaaactaacggagaggaccaaa 26206062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 35903565 - 35903500
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaatat 367  Q
    |||||||||||||||||||||||  ||||||| ||| ||||||||| | || |||||||| |||||    
T  35903565 agttatgggaccaaaatgaaaacttgaaattaattaaaggaccaaatgacctattaagccaaatat 35903500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 102055 - 101991
Alignment:
Q  301 gagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaat 365  Q
    ||||||||| ||||||||||||||||||||||| ||||  || |||| |  ||||||||||||||    
T  102055 gagttatggaaccaaaatgaaaacaagaaattagttaggtgatcaaatgatcaattaagcctaat 101991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 4830613 - 4830681
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||||||| | ||||| ||||||| |||| | ||||||||| ||||||||| |||| |||||||||    
T  4830613 atacaatggacctacaatcgaatggttgaaatcatatcaaaaatattagacattcaaaaactaacggag 4830681  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 8321263 - 8321358
Alignment:
Q  263 acggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaa 358  Q
    |||||||||||  | |||||| ||||||||| |||||  | |||||||||||||||| ||||    ||||| |||||||| |||| ||||||||||    
T  8321263 acggagcaaaattaaagggactaaaatgttggttttaaaatttatgggaccaaaatgtaaacgcataattatttagaggatcaaatgtccaattaa 8321358  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 23231622 - 23231575
Alignment:
Q  277 gagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaac 324  Q
    |||||||||||||| |||||||| || ||||||||||||||| |||||    
T  23231622 gagggaccaaaatgatgattttaagacttatgggaccaaaataaaaac 23231575  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 4513693 - 4513759
Alignment:
Q  180 acaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||| ||||||||||||||||||| |||||| ||||||||| |||   | |||||| |||||||||    
T  4513693 acaatagacatgcaatcaaatggttgaaattatatcaaaaatattatttaataaaaaactaacggag 4513759  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 4921095 - 4921177
Alignment:
Q  280 ggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcct 362  Q
    ||||||||||||   |||||| | ||||||||| |||||| ||||    ||||| ||||||||||||| ||||||||||||||    
T  4921095 ggaccaaaatgtgagttttacaatttatgggactaaaatgtaaacgcataattatttagaggaccaaatgtccaattaagcct 4921177  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 42596751 - 42596673
Alignment:
Q  165 agttcactattaaatacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacg 243  Q
    |||||||||||| ||||||||||  |||||||  |||||| || ||| ||||| | | |||||||||||||| ||||||    
T  42596751 agttcactattatatacaatggatctgcaatcggatggttgaagttatatcaacattattagacattaaaaaactaacg 42596673  T

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Target: scaffold0114 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 38717 - 38538
Alignment:
Q  182 aatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaattgattaacggagcaaaacaagaggg 281  Q
    |||||||||||||||||| || ||| || | || ||||||||||  ||||||||| ||||||||||||  ||| |||| | |||||| ||||| |  |||    
T  38717 aatggacatgcaatcaaacggctaatatcatataaaaaattttaatcattaaaaaactaacggaggggatcaatttgactgacggaggaaaaccaagggg 38618  T
Q  282 accaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    ||||||||||   |||||| | |||||||||||||||| ||||    ||||| |||| |||||||| |||||||||||||    
T  38617 accaaaatgtgagttttacaatttatgggaccaaaatggaaactcataattatttaggggaccaaatgtccaattaagcc 38538  T

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Target: scaffold0092 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 39919 - 39825
Alignment:
Q  264 cggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaa 358  Q
    |||||||||||| ||| |||   || ||||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  39919 cggagcaaaacaggagagactggaacgttgattttacaagttatgggaccaaaatgaaaataataaattacttaggggaccaaaagtccaattaa 39825  T

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Target: scaffold0084 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 11884 - 11807
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggagggggccaaa 255  Q
    |||||||  |||||||||| |||||||||||| | ||||||||| |||||||||||||| ||||||||| || |||||    
T  11884 atacaataaacatgcaatcgaatggttaaaatcacatcaaaaatattagacattaaaaaactaacggagaggaccaaa 11807  T

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Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 9926 - 9860
Alignment:
Q  292 tgattttacgagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaa 358  Q
    |||||||||||| |||| |||||||||||||||| |||||||  ||| ||| |||||||||||||||    
T  9926 tgattttacgagctatgagaccaaaatgaaaacacgaaattaaataggggatcaaaagtccaattaa 9860  T

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Target: scaffold0046 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 24753 - 24821
Alignment:
Q  178 atacaatggacatgcaatcaaatggttaaaattagatcaaaaattttagacattaaaaagctaacggag 246  Q
    ||||||| ||||||||||  |||||||||||| | || |||||| |||||||||||||| |||||||||    
T  24753 atacaatagacatgcaattgaatggttaaaatcacataaaaaatattagacattaaaaaactaacggag 24821  T

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Target: scaffold2071 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 740 - 799
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcc 361  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||| | || ||||||||    
T  740 agttatgggaccaaaatgaaaactggaaattaattagaggaccaaatgacctattaagcc 799  T

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Target: scaffold0687 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 6496 - 6570
Alignment:
Q  173 attaaatacaatggacatgcaatcaaatggttaaaattagat-caaaaattttagacattaaaaagctaacggag 246  Q
    |||| |||||||||||||  ||||||||||||||||| | ||  ||||| ||||||||||||||| |||||||||    
T  6496 attagatacaatggacatagaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggag 6570  T

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Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 15908 - 15954
Alignment:
Q  301 gagttatgggaccaaaatgaaaacaagaaattacttagaggaccaaa 347  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||    
T  15908 gagttatgggaccaaaatgaaaacaacaaataagttagaggaccaaa 15954  T

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Target: scaffold0121 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 4517 - 4450
Alignment:
Q  256 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaa 323  Q
    |||| |||||||||||||   |||||| ||||||||||||||| ||||||||| || |||||| ||||    
T  4517 ttgaataacggagcaaaagttgagggagcaaaatgttgatttttcgagttatgagagcaaaataaaaa 4450  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 127490 - 127427
Alignment:
Q  302 agttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaat 365  Q
    |||||||||||||||| ||||||  ||||||| |||| |||||||| | || ||||||||||||    
T  127490 agttatgggaccaaaacgaaaacttgaaattaattaggggaccaaatgacctattaagcctaat 127427  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 61906 - 61845
Alignment:
Q  304 ttatgggaccaaaatgaaaacaagaaattacttagaggaccaaaagtccaattaagcctaat 365  Q
    ||||| |||||||||||||||| ||||||| |||| |||||||| || | | ||||||||||    
T  61906 ttatgagaccaaaatgaaaacatgaaattatttaggggaccaaacgttctaataagcctaat 61845  T

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Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 63195 - 63235
Alignment:
Q  307 tgggaccaaaatgaaaacaagaaattacttagaggaccaaa 347  Q
    ||||||||||||||||||| ||||||| || ||||||||||    
T  63195 tgggaccaaaatgaaaacacgaaattatttggaggaccaaa 63235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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