View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6139_low_3 (Length: 425)

Name: NF6139_low_3
Description: NF6139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6139_low_3
NF6139_low_3
[»] chr5 (50 HSPs)
chr5 (242-423)||(27867778-27867959)
chr5 (242-423)||(13568033-13568214)
chr5 (242-345)||(1035118-1035221)
chr5 (313-423)||(7021816-7021926)
chr5 (240-361)||(39743168-39743289)
chr5 (315-423)||(37820812-37820920)
chr5 (239-345)||(28387196-28387306)
chr5 (242-345)||(25897115-25897218)
chr5 (245-361)||(34122461-34122577)
chr5 (241-362)||(17966905-17967026)
chr5 (241-345)||(41798751-41798855)
chr5 (243-345)||(34123971-34124073)
chr5 (354-423)||(34077839-34077908)
chr5 (354-423)||(28886351-28886420)
chr5 (359-423)||(25897012-25897076)
chr5 (244-326)||(34077762-34077844)
chr5 (359-423)||(1035260-1035324)
chr5 (245-345)||(1397386-1397486)
chr5 (242-322)||(42942510-42942590)
chr5 (278-361)||(8702218-8702301)
chr5 (242-345)||(41799803-41799906)
chr5 (354-423)||(14279896-14279963)
chr5 (359-423)||(28387345-28387409)
chr5 (246-361)||(17965787-17965902)
chr5 (364-423)||(38860135-38860194)
chr5 (268-361)||(18538355-18538448)
chr5 (265-361)||(28388539-28388635)
chr5 (242-322)||(43093942-43094022)
chr5 (257-361)||(43094596-43094700)
chr5 (298-345)||(7017502-7017549)
chr5 (242-361)||(7757259-7757378)
chr5 (364-423)||(11033395-11033454)
chr5 (364-407)||(21979648-21979691)
chr5 (277-328)||(33995201-33995252)
chr5 (242-328)||(20192287-20192373)
chr5 (242-324)||(42537135-42537217)
chr5 (265-361)||(25877579-25877674)
chr5 (240-328)||(30611171-30611259)
chr5 (263-326)||(540914-540977)
chr5 (265-328)||(3603201-3603264)
chr5 (364-423)||(31098867-31098926)
chr5 (364-423)||(34123855-34123914)
chr5 (364-422)||(4204144-4204202)
chr5 (348-422)||(7800920-7800994)
chr5 (245-359)||(30887382-30887496)
chr5 (257-326)||(31787501-31787571)
chr5 (283-361)||(34682232-34682310)
chr5 (240-328)||(18310074-18310162)
chr5 (265-345)||(25889951-25890031)
chr5 (265-361)||(41201685-41201781)
[»] chr1 (54 HSPs)
chr1 (242-423)||(44465530-44465711)
chr1 (242-423)||(23913791-23913971)
chr1 (242-423)||(5077875-5078055)
chr1 (242-423)||(30905705-30905884)
chr1 (301-423)||(41453831-41453953)
chr1 (242-360)||(6562182-6562300)
chr1 (314-423)||(29356623-29356732)
chr1 (298-423)||(20349447-20349570)
chr1 (242-327)||(37014884-37014969)
chr1 (242-361)||(9711671-9711790)
chr1 (242-345)||(48751446-48751549)
chr1 (348-423)||(15047348-15047423)
chr1 (242-362)||(27484993-27485113)
chr1 (242-361)||(51289980-51290099)
chr1 (348-423)||(31945795-31945868)
chr1 (265-361)||(51666659-51666754)
chr1 (242-361)||(23276128-23276247)
chr1 (241-360)||(51288820-51288939)
chr1 (239-361)||(11183117-11183239)
chr1 (361-423)||(13629470-13629532)
chr1 (239-361)||(46973135-46973257)
chr1 (298-362)||(6557905-6557969)
chr1 (265-345)||(19054016-19054096)
chr1 (301-361)||(44470031-44470091)
chr1 (298-361)||(30910023-30910086)
chr1 (364-423)||(44621050-44621109)
chr1 (242-341)||(52805573-52805672)
chr1 (240-326)||(35521546-35521632)
chr1 (239-361)||(41804053-41804175)
chr1 (295-361)||(52802117-52802183)
chr1 (302-359)||(15047276-15047333)
chr1 (348-423)||(3948396-3948469)
chr1 (348-416)||(9711590-9711658)
chr1 (348-423)||(38776060-38776133)
chr1 (265-361)||(46141739-46141835)
chr1 (277-407)||(4515995-4516130)
chr1 (266-361)||(8458943-8459037)
chr1 (364-423)||(22397875-22397934)
chr1 (364-422)||(8460030-8460088)
chr1 (295-345)||(23359385-23359435)
chr1 (245-361)||(19499132-19499246)
chr1 (242-319)||(29438082-29438159)
chr1 (348-408)||(3983153-3983213)
chr1 (359-423)||(6562095-6562158)
chr1 (240-328)||(23272781-23272869)
chr1 (265-345)||(38689889-38689968)
chr1 (359-423)||(50117710-50117774)
chr1 (241-356)||(44596794-44596909)
chr1 (364-407)||(46973285-46973328)
chr1 (265-319)||(13173793-13173847)
chr1 (283-361)||(13178152-13178230)
chr1 (265-323)||(42570099-42570157)
chr1 (277-326)||(6437594-6437643)
chr1 (242-322)||(46886446-46886526)
[»] chr3 (63 HSPs)
chr3 (242-423)||(23443065-23443245)
chr3 (249-423)||(2745164-2745337)
chr3 (242-345)||(36817557-36817660)
chr3 (298-423)||(50953292-50953416)
chr3 (242-360)||(7843038-7843156)
chr3 (240-361)||(49219811-49219932)
chr3 (242-361)||(7841055-7841174)
chr3 (236-361)||(41137646-41137771)
chr3 (348-423)||(13747651-13747726)
chr3 (348-423)||(9429781-9429856)
chr3 (265-345)||(14398492-14398572)
chr3 (259-326)||(9473943-9474010)
chr3 (242-361)||(48250889-48251008)
chr3 (357-423)||(48250802-48250868)
chr3 (359-423)||(14398611-14398675)
chr3 (241-361)||(46989480-46989600)
chr3 (265-422)||(6505909-6506067)
chr3 (361-423)||(16444674-16444736)
chr3 (301-361)||(2743391-2743451)
chr3 (301-361)||(13743286-13743346)
chr3 (348-423)||(30947587-30947660)
chr3 (359-423)||(36817455-36817518)
chr3 (257-324)||(66850-66917)
chr3 (242-345)||(50216890-50216993)
chr3 (242-328)||(7247913-7247999)
chr3 (348-422)||(7837661-7837735)
chr3 (303-361)||(13747738-13747796)
chr3 (370-423)||(6740949-6741002)
chr3 (256-345)||(34691573-34691662)
chr3 (348-423)||(3948795-3948868)
chr3 (265-361)||(14402990-14403086)
chr3 (265-361)||(28611120-28611216)
chr3 (242-298)||(49217045-49217101)
chr3 (265-328)||(2432996-2433059)
chr3 (298-341)||(6740895-6740938)
chr3 (298-361)||(50957686-50957749)
chr3 (242-325)||(51696571-51696654)
chr3 (283-361)||(41802973-41803051)
chr3 (359-423)||(8160929-8160991)
chr3 (240-345)||(19341630-19341735)
chr3 (300-361)||(34694454-34694515)
chr3 (301-361)||(4002525-4002585)
chr3 (265-361)||(29918361-29918457)
chr3 (265-361)||(29929383-29929479)
chr3 (265-361)||(29967514-29967610)
chr3 (265-361)||(29978537-29978633)
chr3 (265-361)||(41579744-41579840)
chr3 (242-326)||(46993226-46993310)
chr3 (245-361)||(55385074-55385190)
chr3 (298-345)||(9429885-9429932)
chr3 (241-328)||(11380374-11380461)
chr3 (265-328)||(42804412-42804475)
chr3 (265-328)||(55267398-55267461)
chr3 (283-361)||(42756134-42756212)
chr3 (263-345)||(49196485-49196567)
chr3 (241-326)||(54964917-54965003)
chr3 (374-423)||(11389598-11389647)
chr3 (364-421)||(29929508-29929565)
chr3 (364-421)||(29978662-29978719)
chr3 (240-361)||(43478850-43478971)
chr3 (265-322)||(52567720-52567777)
chr3 (242-322)||(600603-600683)
chr3 (242-322)||(5138326-5138406)
[»] chr7 (31 HSPs)
chr7 (242-423)||(29593287-29593467)
chr7 (301-423)||(618683-618805)
chr7 (241-361)||(42499342-42499462)
chr7 (348-423)||(18105439-18105514)
chr7 (242-361)||(47776266-47776385)
chr7 (241-326)||(34142655-34142740)
chr7 (242-360)||(27453615-27453733)
chr7 (265-361)||(36186493-36186588)
chr7 (240-323)||(40590549-40590632)
chr7 (242-323)||(43686906-43686987)
chr7 (331-423)||(47741787-47741878)
chr7 (242-360)||(39460487-39460605)
chr7 (348-423)||(30786591-30786664)
chr7 (348-423)||(43033040-43033113)
chr7 (254-361)||(34742415-34742522)
chr7 (364-423)||(42499490-42499549)
chr7 (243-362)||(45361584-45361703)
chr7 (265-328)||(46860468-46860531)
chr7 (240-310)||(47741712-47741782)
chr7 (240-361)||(9494826-9494947)
chr7 (359-423)||(43624080-43624142)
chr7 (242-287)||(46740634-46740679)
chr7 (254-358)||(34139843-34139947)
chr7 (348-408)||(45763446-45763506)
chr7 (265-345)||(46863380-46863460)
chr7 (240-308)||(48829895-48829963)
chr7 (277-328)||(36392094-36392145)
chr7 (265-328)||(47060884-47060947)
chr7 (240-322)||(48316319-48316401)
chr7 (283-328)||(21185594-21185639)
chr7 (277-326)||(36185805-36185853)
[»] chr8 (44 HSPs)
chr8 (243-423)||(31957769-31957948)
chr8 (241-423)||(41744653-41744834)
chr8 (240-423)||(45454338-45454521)
chr8 (146-240)||(42981554-42981648)
chr8 (241-360)||(1114676-1114795)
chr8 (242-339)||(20546787-20546884)
chr8 (17-108)||(42981052-42981144)
chr8 (240-345)||(35966785-35966890)
chr8 (265-361)||(35962264-35962360)
chr8 (240-341)||(43188005-43188106)
chr8 (243-326)||(39846986-39847069)
chr8 (348-423)||(7340133-7340206)
chr8 (242-361)||(3641580-3641699)
chr8 (242-328)||(5304197-5304283)
chr8 (241-326)||(34234516-34234601)
chr8 (240-345)||(44052262-44052367)
chr8 (265-361)||(7168045-7168141)
chr8 (240-328)||(18441494-18441582)
chr8 (298-423)||(30305503-30305627)
chr8 (242-365)||(41276876-41276999)
chr8 (295-345)||(41743877-41743927)
chr8 (309-422)||(39752957-39753069)
chr8 (348-423)||(32378855-32378928)
chr8 (348-423)||(32432810-32432883)
chr8 (359-423)||(35966682-35966746)
chr8 (265-361)||(39601661-39601757)
chr8 (364-423)||(1114824-1114882)
chr8 (295-345)||(20549268-20549318)
chr8 (277-361)||(39751043-39751126)
chr8 (364-407)||(18205868-18205911)
chr8 (241-361)||(43262358-43262474)
chr8 (372-422)||(2146890-2146940)
chr8 (278-328)||(26455734-26455784)
chr8 (364-422)||(35389590-35389648)
chr8 (242-359)||(41858143-41858260)
chr8 (309-345)||(1116224-1116260)
chr8 (309-361)||(2146977-2147028)
chr8 (277-329)||(3395861-3395913)
chr8 (241-317)||(5300680-5300756)
chr8 (283-343)||(7172625-7172685)
chr8 (265-345)||(18205743-18205823)
chr8 (301-361)||(38872950-38873010)
chr8 (241-345)||(39939251-39939355)
chr8 (241-361)||(40077270-40077390)
[»] scaffold0116 (2 HSPs)
scaffold0116 (242-423)||(11235-11415)
scaffold0116 (302-361)||(15975-16034)
[»] chr2 (43 HSPs)
chr2 (239-361)||(27276394-27276516)
chr2 (298-423)||(38945752-38945877)
chr2 (240-360)||(24749618-24749738)
chr2 (242-423)||(20951005-20951184)
chr2 (240-423)||(1101011-1101193)
chr2 (246-361)||(1096533-1096648)
chr2 (241-423)||(1149405-1149596)
chr2 (309-423)||(3803502-3803615)
chr2 (242-317)||(7262970-7263045)
chr2 (242-361)||(34639334-34639453)
chr2 (359-423)||(7263093-7263157)
chr2 (242-316)||(25964738-25964812)
chr2 (348-422)||(41183157-41183231)
chr2 (348-423)||(18003206-18003279)
chr2 (265-361)||(45475397-45475493)
chr2 (364-423)||(39794044-39794103)
chr2 (265-328)||(41181394-41181457)
chr2 (364-422)||(435424-435482)
chr2 (246-328)||(23786062-23786144)
chr2 (373-423)||(27276310-27276360)
chr2 (238-364)||(35493358-35493484)
chr2 (372-422)||(41008861-41008911)
chr2 (348-423)||(41560070-41560144)
chr2 (348-423)||(213386-213459)
chr2 (301-361)||(3795330-3795390)
chr2 (348-423)||(10624399-10624472)
chr2 (277-361)||(25184850-25184933)
chr2 (265-328)||(19187276-19187339)
chr2 (243-322)||(29093892-29093971)
chr2 (354-423)||(5334634-5334701)
chr2 (278-328)||(24512137-24512187)
chr2 (240-361)||(2917615-2917736)
chr2 (241-361)||(7189971-7190090)
chr2 (265-361)||(19186704-19186800)
chr2 (387-423)||(24749753-24749789)
chr2 (265-361)||(35490637-35490733)
chr2 (361-421)||(43950178-43950238)
chr2 (265-328)||(43493310-43493373)
chr2 (242-293)||(45428550-45428601)
chr2 (277-361)||(435312-435395)
chr2 (277-361)||(23409521-23409605)
chr2 (354-422)||(24607512-24607580)
chr2 (245-345)||(45137469-45137569)
[»] chr4 (41 HSPs)
chr4 (242-361)||(9889928-9890047)
chr4 (241-360)||(41023319-41023438)
chr4 (242-360)||(50274694-50274812)
chr4 (241-328)||(56138180-56138267)
chr4 (240-361)||(50278818-50278939)
chr4 (240-416)||(4768610-4768786)
chr4 (254-363)||(37394194-37394303)
chr4 (241-361)||(8109324-8109444)
chr4 (242-307)||(19073713-19073778)
chr4 (257-345)||(37395227-37395316)
chr4 (359-423)||(15999732-15999796)
chr4 (257-361)||(16984181-16984285)
chr4 (364-423)||(9890075-9890134)
chr4 (364-423)||(19073588-19073647)
chr4 (298-423)||(49566409-49566533)
chr4 (309-371)||(3403848-3403910)
chr4 (241-362)||(1044538-1044659)
chr4 (241-322)||(16983455-16983536)
chr4 (242-362)||(1041869-1041989)
chr4 (359-423)||(1087910-1087974)
chr4 (256-324)||(56140689-56140757)
chr4 (298-361)||(15995712-15995775)
chr4 (298-361)||(19069177-19069240)
chr4 (265-358)||(39588049-39588142)
chr4 (242-345)||(9491295-9491392)
chr4 (265-329)||(37959772-37959836)
chr4 (364-423)||(13173315-13173374)
chr4 (298-361)||(15999819-15999882)
chr4 (265-328)||(49572953-49573016)
chr4 (265-363)||(21472502-21472600)
chr4 (364-422)||(44049180-44049238)
chr4 (390-423)||(3403908-3403941)
chr4 (265-361)||(29700322-29700418)
chr4 (364-407)||(18581280-18581323)
chr4 (242-345)||(56304811-56304913)
chr4 (348-422)||(4975831-4975905)
chr4 (348-422)||(4979850-4979924)
chr4 (241-326)||(37015864-37015949)
chr4 (382-423)||(41023483-41023524)
chr4 (364-416)||(3450019-3450071)
chr4 (264-324)||(51683216-51683276)
[»] scaffold0341 (2 HSPs)
scaffold0341 (242-360)||(17372-17490)
scaffold0341 (359-423)||(17285-17348)
[»] chr6 (26 HSPs)
chr6 (298-423)||(18347031-18347156)
chr6 (348-423)||(13388640-13388715)
chr6 (242-345)||(31768687-31768790)
chr6 (348-423)||(28249951-28250026)
chr6 (242-345)||(29065674-29065777)
chr6 (242-345)||(29074687-29074790)
chr6 (242-345)||(29079451-29079554)
chr6 (242-345)||(29107260-29107363)
chr6 (240-361)||(28362751-28362875)
chr6 (265-361)||(18610226-18610321)
chr6 (242-345)||(29061230-29061333)
chr6 (265-407)||(23985955-23986097)
chr6 (348-423)||(1612681-1612754)
chr6 (268-361)||(18606005-18606097)
chr6 (348-421)||(18606110-18606183)
chr6 (265-365)||(13401443-13401543)
chr6 (309-345)||(31146374-31146410)
chr6 (265-328)||(12784010-12784073)
chr6 (242-361)||(29076343-29076462)
chr6 (242-361)||(29109876-29109995)
chr6 (242-361)||(29111316-29111435)
chr6 (348-407)||(31146439-31146498)
chr6 (265-310)||(26702730-26702775)
chr6 (277-361)||(2050998-2051081)
chr6 (354-422)||(7363250-7363318)
chr6 (257-345)||(23958839-23958927)
[»] scaffold0361 (2 HSPs)
scaffold0361 (242-345)||(4436-4539)
scaffold0361 (359-423)||(4333-4397)
[»] scaffold0494 (2 HSPs)
scaffold0494 (241-361)||(764-884)
scaffold0494 (359-423)||(933-997)
[»] scaffold0260 (1 HSPs)
scaffold0260 (298-423)||(11770-11893)
[»] scaffold0176 (2 HSPs)
scaffold0176 (241-326)||(3580-3665)
scaffold0176 (254-358)||(768-872)
[»] scaffold0184 (1 HSPs)
scaffold0184 (241-345)||(17964-18068)
[»] scaffold0078 (1 HSPs)
scaffold0078 (241-345)||(54776-54880)
[»] scaffold0038 (1 HSPs)
scaffold0038 (348-423)||(50113-50188)
[»] scaffold0219 (1 HSPs)
scaffold0219 (269-422)||(15664-15817)
[»] scaffold0201 (1 HSPs)
scaffold0201 (265-362)||(22360-22457)
[»] scaffold0794 (1 HSPs)
scaffold0794 (348-422)||(5337-5411)
[»] scaffold0012 (2 HSPs)
scaffold0012 (239-360)||(232479-232600)
scaffold0012 (242-306)||(232897-232961)
[»] scaffold0744 (1 HSPs)
scaffold0744 (359-423)||(356-420)
[»] scaffold1379 (1 HSPs)
scaffold1379 (257-345)||(470-558)
[»] scaffold0340 (1 HSPs)
scaffold0340 (265-332)||(1229-1296)
[»] scaffold0513 (1 HSPs)
scaffold0513 (303-361)||(8194-8252)
[»] scaffold0147 (1 HSPs)
scaffold0147 (364-416)||(800-852)


Alignment Details
Target: chr5 (Bit Score: 150; Significance: 4e-79; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 242 - 423
Target Start/End: Complemental strand, 27867959 - 27867778
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27867959 gagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattccggctg 27867860  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  27867859 cagtttactgccgaggaaaatgtttcatccgatgaaacaaccacctgctccccctacacactattttcttcatcaccttcat 27867778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 242 - 423
Target Start/End: Complemental strand, 13568214 - 13568033
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||   ||||||||||| || || ||||||  ||| ||||||||| |||  ||||||||||||||||||||||| ||||||||    
T  13568214 gagaattgttgttcccacattacataaggctgtgccatacgagtaaatgacgtttttaccccatcggtagttaactgccgaggaatttgaaatccggctg 13568115  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  ||||| ||||||||| ||||||| ||||||||| | || |||||| ||||||||||||||||||||||||||||||    
T  13568114 cagttaactgccgaggaaaatgtttcatctgatgaaacagctacctgctccacctacacactattttcttcatcaccttcat 13568033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 1035118 - 1035221
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  1035118 gagaattgttgttcccacgtgtgataaggctgtgccacactaataaaatacgattttaccccctcggcagttaactgccgaggaatttgaatttcggctg 1035217  T
Q  342 cagt 345  Q
    ||||    
T  1035218 cagt 1035221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 7021926 - 7021816
Alignment:
Q  313 taactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttc 412  Q
    ||||||| |||||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  7021926 taactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttc 7021827  T
Q  413 atcaccttcat 423  Q
    |||||||||||    
T  7021826 atcaccttcat 7021816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 39743289 - 39743168
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | || |    
T  39743289 aagagaattgttgttcccacatttgataaggctgtgccacactagtaaaatatgattttgccccctcgacagttaactgccgaggaatttgaaattcgac 39743190  T
Q  340 tgcagtatactgctgaggaaaa 361  Q
    ||||||  ||||| ||||||||    
T  39743189 tgcagttaactgccgaggaaaa 39743168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 37820920 - 37820812
Alignment:
Q  315 actgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcat 414  Q
    |||||||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  37820920 actgccgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactattttcttcat 37820821  T
Q  415 caccttcat 423  Q
    |||||||||    
T  37820820 caccttcat 37820812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 345
Target Start/End: Original strand, 28387196 - 28387306
Alignment:
Q  239 gaagagaattgttgctcccacatgtgataaggctgtgt----cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaatt 334  Q
    ||||||||||| || |||||||| | |||||||| | |    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28387196 gaagagaattgatgttcccacatttaataaggctatatatgccacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaatt 28387295  T
Q  335 ccggctgcagt 345  Q
    |||||||||||    
T  28387296 ccggctgcagt 28387306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 25897218 - 25897115
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||||  |||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  25897218 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatattattttaccccttcggcagttaactaccgaggaatttgaactccggctg 25897119  T
Q  342 cagt 345  Q
    ||||    
T  25897118 cagt 25897115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 34122461 - 34122577
Alignment:
Q  245 aattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcag 344  Q
    |||||||| ||||| || |||||||| |||| |||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||||||    
T  34122461 aattgttgttcccatatttgataaggttgtgccacattagtaaaatacgattttgccccttcggcagttaactgccgaggaatttgaaatccggctgcag 34122560  T
Q  345 tatactgctgaggaaaa 361  Q
    |  ||||| ||||||||    
T  34122561 ttaactgccgaggaaaa 34122577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 362
Target Start/End: Complemental strand, 17967026 - 17966905
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |||||||| ||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||||| ||||  || |||| ||    
T  17967026 agagaattgttgttcccacatttgataaggctgagaaacactagtaaaatacgattttaccccctcggcagttaactgccgagaaattaaaaatccgact 17966927  T
Q  341 gcagtatactgctgaggaaaat 362  Q
    |||||  ||| | |||||||||    
T  17966926 gcagttaactaccgaggaaaat 17966905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 345
Target Start/End: Original strand, 41798751 - 41798855
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |||||||  ||||||||| ||| ||||||||||||||| |||||| |||||||| ||||||||||| || ||||||||| |||||||    
T  41798751 agagaattgttgttcccacaattgataaggccgtgccacactagtaaaatatgattttgccccctcggcagttaactgctgaagaatttgaaatccggct 41798850  T
Q  341 gcagt 345  Q
    |||||    
T  41798851 gcagt 41798855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 243 - 345
Target Start/End: Complemental strand, 34124073 - 34123971
Alignment:
Q  243 agaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgc 342  Q
    |||||||||| |||||||| | |||||| |||| ||||| |||||||||||||||| |||||||| |||||||||| |||| |||||||| |||||||||    
T  34124073 agaattgttgttcccacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgc 34123974  T
Q  343 agt 345  Q
    |||    
T  34123973 agt 34123971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 34077839 - 34077908
Alignment:
Q  354 gaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  34077839 gaggaaaatgtttcatccgatgaaacagtcacctgctccccctacacactattttcttcatcaccttcat 34077908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 28886420 - 28886351
Alignment:
Q  354 gaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||||| ||||||| ||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  28886420 gaggaaaatgtttcatctgatgaaacagctacctgctccccctacacactattttcttcatcaccttcat 28886351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 25897076 - 25897012
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  25897076 aaatgtttcatccgatgaaacagccacctgctccccctacacgctattttcttcatcaccttcat 25897012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 34077762 - 34077844
Alignment:
Q  244 gaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    ||||||||| |||||| || ||||||| |||| ||||||| |||||||||||||||||||||||  |||||| ||||||||||    
T  34077762 gaattgttgttcccacgtgagataaggttgtgccacactaataaaatacgattttaccccctcggtagttaattgccgaggaa 34077844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 1035260 - 1035324
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  1035260 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 1035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 1397486 - 1397386
Alignment:
Q  245 aattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcag 344  Q
    |||||||| |||||||| |||||||| |||| ||||| |||||  |||  |||| |||||||| ||||||||||| |||||||| ||| |||||||||||    
T  1397486 aattgttgttcccacatttgataaggttgtggcacacgagtaatttacatttttgccccctcggcagttaactgctgaggaattagaaatccggctgcag 1397387  T
Q  345 t 345  Q
    |    
T  1397386 t 1397386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 42942590 - 42942510
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    ||||||||||| |||||||| ||||||||||| |  |||| ||||||||||| ||||||||||| | ||||||||||||||    
T  42942590 gagaattgttgttcccacatttgataaggctgagaaacacaagtaaaatacgcttttacccccttggcagttaactgccga 42942510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 8702301 - 8702218
Alignment:
Q  278 acactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||||||  || || | |||||||  ||||||||||||||    
T  8702301 acacaagtaaaatacgattttgctccctcgacagttaactgccgaggaattaaaaatctgactgcagttaactgctgaggaaaa 8702218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 41799906 - 41799803
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| ||||||| ||||| ||||| |||||  |||  |||| |||||||||||||||||||| |||||||| ||| ||  ||||    
T  41799906 gagaattgttgttcccacatttgataagactgtgacacacgagtaatttacttttttgccccctcgacagttaactgctgaggaattagaaatctagctg 41799807  T
Q  342 cagt 345  Q
    ||||    
T  41799806 cagt 41799803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 14279896 - 14279963
Alignment:
Q  354 gaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||||| ||||||||||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  14279896 gaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 14279963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 28387345 - 28387409
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||| ||||||    
T  28387345 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaacttcat 28387409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 361
Target Start/End: Original strand, 17965787 - 17965902
Alignment:
Q  246 attgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||| |||||| | ||||||||||| |   ||||||||||||||||||||| ||||||| ||||||| || |||||||||  || | || |||||||    
T  17965787 attgttgttcccacttttgataaggctgagaatcactagtaaaatacgattttatcccctcggcagttaattgtcgaggaattaaaaattcgactgcagt 17965886  T
Q  346 atactgctgaggaaaa 361  Q
      ||||| ||||||||    
T  17965887 taactgccgaggaaaa 17965902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 38860194 - 38860135
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||||||||||| ||||||    
T  38860194 tttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcat 38860135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 361
Target Start/End: Complemental strand, 18538448 - 18538355
Alignment:
Q  268 aggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||| | ||||| |||||||||||||||| |||||||| ||||||| || |||||||||  ||  |||||||||||  ||||| ||||||||    
T  18538448 aggctgaggcacacaagtaaaatacgattttgccccctcggcagttaattgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaa 18538355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 28388635 - 28388539
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| ||||| ||||   |||  |||| |||||||| |||||| ||||||||||||||||| ||| ||||||||  ||||| ||||||||    
T  28388635 ataaggctgtgccacacgagtattttactcttttgccccctcggcagttagctgccgaggaatttgaaatccagctgcagttaactgccgaggaaaa 28388539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 43093942 - 43094022
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    ||||||||||| |  || || ||||||||||||||||||| ||||||  ||| ||||||||| || |||||||||||||||    
T  43093942 gagaattgttgtttacatatttgataaggctgtgtcacacgagtaaatgacgtttttaccccttcaacagttaactgccga 43094022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 43094700 - 43094596
Alignment:
Q  257 cacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgag 356  Q
    ||||| |||||||| | || ||||| ||||||  ||| ||||||||| |||||||||||||||||| |  || ||| ||||||||||||  ||||| |||    
T  43094700 cacatttgataaggttatgccacacgagtaaatgacgtttttaccccatcgacagttaactgccgaagttttagaaatccggctgcagttaactgccgag 43094601  T
Q  357 gaaaa 361  Q
    |||||    
T  43094600 gaaaa 43094596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 7017502 - 7017549
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  7017502 taccccctcgatagttaactgctgaggaatttgaaatccggctgcagt 7017549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 361
Target Start/End: Original strand, 7757259 - 7757378
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || ||||||||   ||||| || || ||||| ||||||  ||| |||| ||||||||||||||||||||||| |  || ||| ||||||||    
T  7757259 gagaattgctgttcccacattacataagactatgccacacgagtaaatgacgtttttgccccctcgacagttaactgccgaagttttagaaatccggctg 7757358  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||| ||||||||    
T  7757359 cagttaactgccgaggaaaa 7757378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 11033454 - 11033395
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||| | |||| |||||||||||||| ||||||||||||||| ||||||    
T  11033454 tttcatcagatgaaatagccacctgctccccctacactctattttcttcatcaacttcat 11033395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 407
Target Start/End: Original strand, 21979648 - 21979691
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattt 407  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  21979648 tttcatcagatgaaacagccacatgctccccctacacactattt 21979691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 33995252 - 33995201
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||| ||||    
T  33995252 cacacaagtaaaatacaattttatcccctcgacagttaactgccgagaaatt 33995201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 20192287 - 20192373
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||||| |  ||||| | ||||||||| | ||||| |||||||||||||||| |||| ||| ||||||||||| || |||||    
T  20192287 gagaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccttcgtcagttaactgctgaagaatt 20192373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 42537135 - 42537217
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgagg 324  Q
    ||||||||||| || ||||| ||||||||||| |  |||| ||||||||||  |||| |||| ||| ||||||||||||||||    
T  42537135 gagaattgttgttcacacatttgataaggctgagaaacacgagtaaaatacatttttgccccatcggcagttaactgccgagg 42537217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 25877579 - 25877674
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||| |||||||||| ||||||||||| ||||||| | ||| || |||| |||||||||||| |||  ||||||||| |  ||||| ||||||||    
T  25877579 ataaggttgtgtcacacgagtaaaatacgtttttaccacttcggcaattaaatgccgaggaattcgaa-accggctgcaattaactgccgaggaaaa 25877674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 30611171 - 30611259
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||||||| || ||||| ||||||||||| |  |||| |||||||| || |||| |||||| | ||||||||| ||||| ||||    
T  30611171 aagagaattgttgttcacacatttgataaggctgagaaacacgagtaaaattcgtttttgcccccttggcagttaactaccgagcaatt 30611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 540914 - 540977
Alignment:
Q  263 tgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    ||||||||||| |  ||||||||||||||||||||  || ||||| |||||||||| |||||||    
T  540914 tgataaggctgagaaacactagtaaaatacgatttagcctcctcggcagttaactgtcgaggaa 540977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 3603264 - 3603201
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||  ||||||||||| |||| | ||||||||||||||||||||| |||||    
T  3603264 ataaggctgaggcacataagtaaaatacgtttttgctccctcgacagttaactgccgaagaatt 3603201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 31098926 - 31098867
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||  ||||||||||||| ||||||||| |||||| ||||||    
T  31098926 tttcatcagatgaaacagccatctgctccccctacatactattttcatcatcaacttcat 31098867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 34123914 - 34123855
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| |||||||||  ||| ||||||||||||| ||||||||| |||||| ||||||    
T  34123914 tttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttcat 34123855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 4204202 - 4204144
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||||| ||||||||| | || ||||||| ||||||||||||||| |||||| |||||    
T  4204202 tttcatcagatgaaacaactacctgctccctctacacactattttcatcatcaacttca 4204144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 7800994 - 7800920
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    |||||||||||| || ||||||| |||||||||  ||| |||||| |||||  ||||||||| |||||| |||||    
T  7800994 actgctgaggaatatgtttcatcagatgaaacagtcacctgctcctcctacgtactattttcatcatcaacttca 7800920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 359
Target Start/End: Complemental strand, 30887496 - 30887382
Alignment:
Q  245 aattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcag 344  Q
    |||||||| |||||||| |||||| | |||| ||||| |||||  |||| |||| |  ||| | |||||||||||  ||||||| ||| |||||||||||    
T  30887496 aattgttgttcccacatttgataacgttgtggcacacgagtaatttacgtttttgcttcctaggcagttaactgctaaggaattagaaatccggctgcag 30887397  T
Q  345 tatactgctgaggaa 359  Q
    |  ||||| ||||||    
T  30887396 ttaactgccgaggaa 30887382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 31787501 - 31787571
Alignment:
Q  257 cacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagtt-aactgccgaggaa 326  Q
    ||||| ||||||||||||| ||||| ||||||  ||  ||||||||||||| ||||| |||||||||||||    
T  31787501 cacatttgataaggctgtgccacacgagtaaatgacatttttaccccctcggcagttaaactgccgaggaa 31787571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 34682232 - 34682310
Alignment:
Q  283 agtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| |||| | |||| |||||||||||| |||||||||  ||  |||||||||||  ||||| ||||||||    
T  34682232 agtaaaatacgcttttgctcccttgacagttaactgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaa 34682310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 328
Target Start/End: Complemental strand, 18310162 - 18310074
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||||||| |  |||||   ||||||||| | ||||| ||||||||||| |||| || ||||  |||||||||| |||||||||    
T  18310162 aagagaattgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgcctcctcagcagttaactgtcgaggaatt 18310074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 25889951 - 25890031
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||||||| ||||| ||||   |||  |||| |||||||  |||| ||||||||||||||||||| |||| |||||||    
T  25889951 ataaggctgtgccacacaagtattttactcttttgccccctcagcagtaaactgccgaggaatttgaaatccgactgcagt 25890031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 41201685 - 41201781
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| ||||||||||||||||  || ||||||| |||| || |||||||||  |   |||||||||||  ||||| ||||||||    
T  41201685 ataaggctgaggcacacgagtaaaatacgattttgtcctctcgacaattaattgtcgaggaattcaataaccggctgcagttaactgccgaggaaaa 41201781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 5e-72; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 242 - 423
Target Start/End: Original strand, 44465530 - 44465711
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  44465530 gagaattgttgttcccacatgtgataaggttgtgccatactagtaaaatacgattttaccccctcggcagttaactaccgaggaatttgaattccggctg 44465629  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  44465630 cagtttactgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcat 44465711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 242 - 423
Target Start/End: Original strand, 23913791 - 23913971
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  23913791 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcagcagttaactaccgaggaatttgaattccggctg 23913890  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  |||||||||| |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  23913891 cagttaactgctgagg-aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaccttcat 23913971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 242 - 423
Target Start/End: Original strand, 5077875 - 5078055
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||| |||    
T  5077875 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgctgagaaatttgaaatccgactg 5077974  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  ||||| |||| |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  5077975 cagttaactgccgagg-aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 5078055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 242 - 423
Target Start/End: Original strand, 30905705 - 30905884
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||    
T  30905705 gagaattgctgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttatcccctcggcagttaactgccgagaaatttgaaatccggctg 30905804  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  ||||| ||||  ||| ||||||| ||||||||| |||| ||| |||||||||||||||||||||||||| ||||||    
T  30905805 cagttaactgccgagg-gaatgtttcatcagatgaaacagccacctgc-ccccctacacactattttcttcatcaacttcat 30905884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 301 - 423
Target Start/End: Original strand, 41453831 - 41453953
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacac 400  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  41453831 cccctcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacac 41453930  T
Q  401 actattttcttcatcaccttcat 423  Q
    |||||||||||||||||||||||    
T  41453931 actattttcttcatcaccttcat 41453953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 242 - 360
Target Start/End: Complemental strand, 6562300 - 6562182
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  6562300 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 6562201  T
Q  342 cagtatactgctgaggaaa 360  Q
    ||||  ||||| |||||||    
T  6562200 cagttaactgccgaggaaa 6562182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 314 - 423
Target Start/End: Complemental strand, 29356732 - 29356623
Alignment:
Q  314 aactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttca 413  Q
    ||||||||||||||||||| ||| ||||||||  ||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  29356732 aactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttca 29356633  T
Q  414 tcaccttcat 423  Q
    ||||||||||    
T  29356632 tcaccttcat 29356623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 423
Target Start/End: Original strand, 20349447 - 20349570
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctcccccta 397  Q
    ||||| |||| ||||||||| |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||| | || |||||||||||    
T  20349447 taccctctcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctcccccta 20349546  T
Q  398 cacactattttcttcatcaccttcat 423  Q
    ||||||||||  ||||||||||||||    
T  20349547 cacactattt--ttcatcaccttcat 20349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 37014884 - 37014969
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaat 327  Q
    ||||||||||| |||||||| |||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37014884 gagaattgttgttcccacatttgataatgttgtggcacactagtaaaatacgattttgccccctcgacagttaactgccgaggaat 37014969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 9711790 - 9711671
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||| |||| ||  |||||||||||||||||||| ||| |||||  |    
T  9711790 gagaattgttgttcccacatttgataaggttgtggcacactagtaaaatacgattttgccccatcagcagttaactgccgaggaattagaaatccggtcg 9711691  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||| ||||||||    
T  9711690 cagttaactgccgaggaaaa 9711671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 48751549 - 48751446
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||| ||||||||||| |  |||||||||||||||||||||||||||||| || | |||||||||||||||  || ||||||||    
T  48751549 gagaattgatgttcccacatttgataaggctgagaaacactagtaaaatacgattttaccccctcggcactgaactgccgaggaattaaaaatccggctg 48751450  T
Q  342 cagt 345  Q
    ||||    
T  48751449 cagt 48751446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 15047348 - 15047423
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||    
T  15047348 actgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctatacactattttcttcatcaccttcat 15047423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 362
Target Start/End: Original strand, 27484993 - 27485113
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||| ||||||||||| |  |||| ||||||||||| |||| |||||||| |||||||||||| |||||||  || ||||||||    
T  27484993 gagaattgctgttcccacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgcctaggaattaaaaatccggctg 27485092  T
Q  342 cagtatactgctgaggaaaat 362  Q
    ||||  ||||| ||| |||||    
T  27485093 cagttaactgccgagaaaaat 27485113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 51290099 - 51289980
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||  | ||||||||||| |  |||||||||||||| ||||||||||||||| ||||||||| | ||||||||  || ||||| ||    
T  51290099 gagaattgttgttcccatgtttgataaggctgagaaacactagtaaaataagattttaccccctcggcagttaactactgaggaattaaaaatccggttg 51290000  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||| ||||||||    
T  51289999 cagttaactgccgaggaaaa 51289980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 31945868 - 31945795
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  31945868 actgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 31945795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 51666754 - 51666659
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||| |||||||||||| ||||||||||| |||| |||||||| ||||||| ||||||| |||| ||| | ||||||||||  ||||||||||||||    
T  51666754 ataaagctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgagtaattcgaaat-cggctgcagttaactgctgaggaaaa 51666659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 23276247 - 23276128
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| || | ||| ||||||||||| |  |||| ||||||||||| |||| |||||||| ||||||||||| ||||||||  || |||||||     
T  23276247 gagaattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggcta 23276148  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||| ||||||||    
T  23276147 cagttaactgccgaggaaaa 23276128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 360
Target Start/End: Original strand, 51288820 - 51288939
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    ||||||||| |  |||||||| ||||||||||||| ||||| | |||  || | |||| |||||||| ||||||||| |||||||||| ||| |||||||    
T  51288820 agagaattgctattcccacatttgataaggctgtggcacacgaataatttatgtttttgccccctcggcagttaactaccgaggaattagaaatccggct 51288919  T
Q  341 gcagtatactgctgaggaaa 360  Q
    |||||  ||||| |||||||    
T  51288920 gcagttaactgcggaggaaa 51288939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 361
Target Start/End: Original strand, 11183117 - 11183239
Alignment:
Q  239 gaagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccgg 338  Q
    |||||||||||||| |  ||||| ||||||||||| |  | || ||||||||||| |||| | |||| ||||||||||||| ||||||||  || |||||    
T  11183117 gaagagaattgttgttgacacatttgataaggctgagaaatacgagtaaaatacgtttttgctcccttgacagttaactgctgaggaattaaaaatccgg 11183216  T
Q  339 ctgcagtatactgctgaggaaaa 361  Q
    |||||||  ||||| ||||||||    
T  11183217 ctgcagttaactgccgaggaaaa 11183239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 13629470 - 13629532
Alignment:
Q  361 atatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||| ||||||    
T  13629470 atatttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcat 13629532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 361
Target Start/End: Original strand, 46973135 - 46973257
Alignment:
Q  239 gaagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccgg 338  Q
    ||||| |||||||| |  ||||| | || |||||| | ||||| |||||||||||||||| |||||| | ||||||||||||||||||||  ||  ||||    
T  46973135 gaagaaaattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaaccgg 46973234  T
Q  339 ctgcagtatactgctgaggaaaa 361  Q
    |||||||  ||||| ||||||||    
T  46973235 ctgcagttaactgccgaggaaaa 46973257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 6557905 - 6557969
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaat 362  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||  ||||| |||||||||    
T  6557905 taccccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaat 6557969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 19054016 - 19054096
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||||| |  |||| ||||||||||| |||| |||||||||||||||||||||||||||||  ||  |||||||||||    
T  19054016 ataaggctgagaaacacgagtaaaatacgtttttgccccctcgacagttaactgccgaggaattcaaaaaccggctgcagt 19054096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 44470091 - 44470031
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||    
T  44470091 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 44470031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 30910086 - 30910023
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||||||| |||||||||| ||||||||||||| ||||||||||||  ||||| ||||||||    
T  30910086 taccccctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaa 30910023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 44621109 - 44621050
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||||||||||| ||||||    
T  44621109 tttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcat 44621050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 341
Target Start/End: Complemental strand, 52805672 - 52805573
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||| |||||||| |||| ||||| |||||  ||   |||| |||||||| |||||||||||||| ||||||||| ||||||||    
T  52805672 gagaattgatgttcccacatttgataaggttgtggcacacaagtaatttatttttttgccccctcggcagttaactgccgacgaatttgaaatccggctg 52805573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 35521546 - 35521632
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    |||| |||||||| |  ||||| | ||||||||| | ||||| |||||||||||||||| ||| |||| ||||||||||||||||||    
T  35521546 aagaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaa 35521632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 361
Target Start/End: Complemental strand, 41804175 - 41804053
Alignment:
Q  239 gaagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccgg 338  Q
    ||||| |||||||| |  ||||| | ||||||||| | ||||| ||||||||||| |||| |||| ||| ||||||||||||||||||||  ||  |||     
T  41804175 gaagaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccga 41804076  T
Q  339 ctgcagtatactgctgaggaaaa 361  Q
    |||||||  ||||| ||||||||    
T  41804075 ctgcagttaactgccgaggaaaa 41804053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 52802117 - 52802183
Alignment:
Q  295 ttttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||| ||| |||| |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||    
T  52802117 ttttgccctctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 52802183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 15047276 - 15047333
Alignment:
Q  302 ccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaa 359  Q
    |||||| |||||||||||||||||||||||| ||||||||||||  ||||| ||||||    
T  15047276 ccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaa 15047333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 3948469 - 3948396
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  3948469 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 3948396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 9711658 - 9711590
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatca 416  Q
    ||||| |||||| || ||||||| ||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  9711658 actgccgaggaatatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatca 9711590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 38776133 - 38776060
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  38776133 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 38776060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 46141739 - 46141835
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| |  |||| |||||||||||||||| ||| |||| ||||||||||||||||||||  |   |||||||||||  ||||| ||||||||    
T  46141739 ataaggctgaggtacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaattcaataaccggctgcagttaactgccgaggaaaa 46141835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 407
Target Start/End: Original strand, 4515995 - 4516130
Alignment:
Q  277 cacactagtaaaatacgattttaccccctc-----gacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatcc 371  Q
    ||||| ||||||||||||||||  ||||||     | ||||||||||||||||||||  ||  |||||||||||  ||||| ||| |  || ||| ||      
T  4515995 cacacaagtaaaatacgattttgtcccctcggcagggcagttaactgccgaggaattcaaaaaccggctgcagttaactgccgagaattatgttttatta 4516094  T
Q  372 gatgaaacatccacatgctccccctacacactattt 407  Q
    ||||||||| |||| |||||||||||||||||||||    
T  4516095 gatgaaacagccacctgctccccctacacactattt 4516130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 8458943 - 8459037
Alignment:
Q  266 taaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||| |||||||||| ||||||||||| ||||| ||||||   |||||||||||| ||||||||||  ||| |||||||  ||||| ||||||||    
T  8458943 taaggttgtgtcacacgagtaaaatacgtttttatcccctcagaagttaactgccgtggaatttgaa-accgactgcagttaactgccgaggaaaa 8459037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 22397875 - 22397934
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||| | |||| |||||||||||||| ||||||||||||||| ||||||    
T  22397875 tttcatcagatgaaatagccacctgctccccctacactctattttcttcatcaacttcat 22397934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 8460088 - 8460030
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||||| ||||||||| |||| |||| |||||||||||||||||| |||||| |||||    
T  8460088 tttcatcagatgaaacagccacctgcttcccctacacactattttcatcatcaacttca 8460030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 23359435 - 23359385
Alignment:
Q  295 ttttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||| |||||||| ||||||| |||||||||||||||| ||||||||||||    
T  23359435 ttttgccccctcggcagttaattgccgaggaatttgaaatccggctgcagt 23359385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 19499246 - 19499132
Alignment:
Q  245 aattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcag 344  Q
    |||||||| || ||||| | ||||| ||| | ||||| ||||||||||| |||| |||  ||||||||||||||| ||| ||||| || | |||||||||    
T  19499246 aattgttgttcgcacatatcataagactgagacacacaagtaaaatacgtttttgccc--tcgacagttaactgctgagaaatttaaaattcggctgcag 19499149  T
Q  345 tatactgctgaggaaaa 361  Q
    |  ||||| ||||||||    
T  19499148 ttaactgccgaggaaaa 19499132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 29438159 - 29438082
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgc 319  Q
    ||||||||||| |||||||| |||||||| |||| ||||| | |||  |||| |||| |||||||| |||||||||||    
T  29438159 gagaattgttgttcccacatttgataaggttgtggcacacgaataatttacgtttttgccccctcggcagttaactgc 29438082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 3983153 - 3983213
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactatttt 408  Q
    ||||| |||| |||| |||||| |||||||||| | || ||||||||||||||||||||||    
T  3983153 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactatttt 3983213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 6562158 - 6562095
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| ||||||| ||| |||||||||||||||||| ||||||    
T  6562158 aaatgtttcatcagatgaaacagccacctgctccctcta-acactattttcttcatcaacttcat 6562095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 23272781 - 23272869
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||||||| ||  |||| |||||||| || |  | || ||||||||||| ||||  ||||||| ||||||||||||||||||||    
T  23272781 aagagaattgttgttcatacatttgataaggatgagaaatacgagtaaaatacgtttttttcccctcgccagttaactgccgaggaatt 23272869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 38689889 - 38689968
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||| |||||||||||  ||||||||||| |||||||||||||  |||||| || ||||||||| |||  |||||||||||    
T  38689889 ataaagctgtgtcacatgagtaaaatacgcttttaccccctcggtagttaaatgtcgaggaattcgaa-accggctgcagt 38689968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 50117774 - 50117710
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||| ||| ||||||||| |||| ||||||| ||||||||||||||| |||||| ||||||    
T  50117774 aaatgttttatcagatgaaacagccacctgctccctctacacactattttcatcatcaacttcat 50117710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 44596794 - 44596909
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| ||||||||   ||||| ||||| ||||| ||||||  ||| |||| ||| |||| |||||||||||||| |  || ||| ||||| |    
T  44596794 agagaattgttgttcccacattacataagactgtgccacacgagtaaatgacgtttttgcccgctcggcagttaactgccgaagttttagaaatccggtt 44596893  T
Q  341 gcagtatactgctgag 356  Q
    |||||  |||||||||    
T  44596894 gcagttaactgctgag 44596909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 407
Target Start/End: Original strand, 46973285 - 46973328
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattt 407  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||    
T  46973285 tttcatcagatgaaacagccacctgctccccctacacactattt 46973328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 13173793 - 13173847
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgc 319  Q
    ||||||||| | ||||| |||||||||| ||||| |||||||| |||||||||||    
T  13173793 ataaggctgaggcacacaagtaaaatactattttgccccctcggcagttaactgc 13173847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 361
Target Start/End: Complemental strand, 13178230 - 13178152
Alignment:
Q  283 agtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| |||| | |||||| ||||||||||| ||| ||||| ||  || ||||||||  ||||||||||||||    
T  13178230 agtaaaatacgtttttgctccctcggcagttaactgctgagaaatttaaaaaccagctgcagttaactgctgaggaaaa 13178152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 42570099 - 42570157
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgag 323  Q
    ||||||||| | ||||| ||||||| ||||||||||  |||||||||||||||| ||||    
T  42570099 ataaggctgaggcacacaagtaaaacacgattttacatcctcgacagttaactgtcgag 42570157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 6437643 - 6437594
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    ||||| ||||||||||| |||| ||| |||| ||||||||||||||||||    
T  6437643 cacacaagtaaaatacgcttttgccctctcggcagttaactgccgaggaa 6437594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 46886526 - 46886446
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    ||||||||||| |  ||||| |||||||| ||||  |||| ||||||  ||| |||| |||||||| ||||||||||||||    
T  46886526 gagaattgttgtttacacatttgataaggttgtgctacacgagtaaatgacgtttttgccccctcggcagttaactgccga 46886446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 242 - 423
Target Start/End: Complemental strand, 23443245 - 23443065
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23443245 gagaattgttgttcccacatttgataaggctgtgacacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattccggctg 23443146  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  ||||| || || ||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  23443145 cagttaactgccga-gagaatgtttcatcagatgaaacaaccacctgctccccctacacactattttcttcatcaacttcat 23443065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 249 - 423
Target Start/End: Complemental strand, 2745337 - 2745164
Alignment:
Q  249 gttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtata 348  Q
    |||| ||||||||||||||||| |||||||||| | |||||||||||||||||||||||  |||||||||| |||||||||||| | ||||||||||  |    
T  2745337 gttgttcccacatgtgataaggttgtgtcacaccaataaaatacgattttaccccctcggtagttaactgctgaggaatttgaaattcggctgcagttaa 2745238  T
Q  349 ctgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||  ||||    | ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  2745237 ctgtcgagg-gtctgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 2745164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 36817660 - 36817557
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||||||||||  ||||||||| |||||||||||||| ||||||||    
T  36817660 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatactattttaccccctcagcagttaactaccgaggaatttgaactccggctg 36817561  T
Q  342 cagt 345  Q
    ||||    
T  36817560 cagt 36817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 423
Target Start/End: Original strand, 50953292 - 50953416
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctcccccta 397  Q
    ||||||||||  ||||||||||  ||||||||||| ||||||||||||  ||||| ||||||| ||||||||| ||||||||| |||| |||||||||||    
T  50953292 taccccctcggtagttaactgcataggaatttgaaatccggctgcagttaactgccgaggaaa-tatttcatcagatgaaacagccacctgctcccccta 50953390  T
Q  398 cacactattttcttcatcaccttcat 423  Q
    ||||||||||||||||||| ||||||    
T  50953391 cacactattttcttcatcaacttcat 50953416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 242 - 360
Target Start/End: Complemental strand, 7843156 - 7843038
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||| ||| ||||||||||||| |||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||| |||    
T  7843156 gagaattgttgttccctcatttgataaggctgtgccacattagtaaaatacaattttatcccctcggcagttaactgccgagaaatttgaattccgactg 7843057  T
Q  342 cagtatactgctgaggaaa 360  Q
    ||||  ||||| |||||||    
T  7843056 cagttaactgcagaggaaa 7843038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 49219932 - 49219811
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    |||||||||| |||||| |||| ||||||||||||| |||||||||||||||| ||||| || |||||  ||||||||||||||||||| ||| ||||||    
T  49219932 aagagaattgctgctcctacatttgataaggctgtgccacactagtaaaatacaattttgcctcctcggtagttaactgccgaggaattagaaatccggc 49219833  T
Q  340 tgcagtatactgctgaggaaaa 361  Q
    ||||||  ||||| ||||||||    
T  49219832 tgcagttaactgccgaggaaaa 49219811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 242 - 361
Target Start/End: Original strand, 7841055 - 7841174
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||| || |||||| |||||||||||||| || |||||    
T  7841055 gagaattattgttcccacatttgataaggctgtgtcacactagtaaaatacaattttgccccctcggcaattaactaccgaggaatttgaaatctggctg 7841154  T
Q  342 cagtatactgctgaggaaaa 361  Q
    || |  ||||| ||||||||    
T  7841155 catttaactgccgaggaaaa 7841174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 41137646 - 41137771
Alignment:
Q  236 taagaagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattc 335  Q
    |||| |||||||||||| |||||||| |||||||| |||| ||||||||||||||| | |||| | || ||  |||||||||||||||||||||||| ||    
T  41137646 taagtagagaattgttgttcccacatttgataaggttgtgccacactagtaaaatatgtttttgctccatcagcagttaactgccgaggaatttgaaatc 41137745  T
Q  336 cggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||  ||||| ||||||||    
T  41137746 cggctgcagttaactgccgaggaaaa 41137771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 13747726 - 13747651
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  13747726 actgccgaggaaaatgtttcatccgatgaaacagccacctgctccccctacactctattttcttcatcaccttcat 13747651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 9429856 - 9429781
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || ||||||||||||||||| |||||||||||||||||||    
T  9429856 actgccgaggaaaatgtttcatccgatgaaacaactacctgctccccctacacactgttttcttcatcaccttcat 9429781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 14398492 - 14398572
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||||||||||||| ||||   |||||||||| | ||||| | |||||||||||||||||||||||||||||||||||    
T  14398492 ataaggctgtgtcacacgagtattttacgattttatctcctcggcggttaactgccgaggaatttgaattccggctgcagt 14398572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 9474010 - 9473943
Alignment:
Q  259 catgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    ||||||||||||||||| ||||| |||||||||||||||||| |||| | ||||||||||||||||||    
T  9474010 catgtgataaggctgtgccacaccagtaaaatacgattttactcccttggcagttaactgccgaggaa 9473943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 48251008 - 48250889
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||   |||||| |||| ||||  | ||||  ||| |||| |||||||| ||||||||||| |||||||||||||||||||||    
T  48251008 gagaattgttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaactgctgaggaatttgaattccggctg 48250909  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||| ||||||||    
T  48250908 cagttaactgccgaggaaaa 48250889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 48250868 - 48250802
Alignment:
Q  357 gaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  48250868 gaaaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 48250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 14398611 - 14398675
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  14398611 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 14398675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 46989480 - 46989600
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |  ||||| | |||||| ||||||| || ||||||  ||| |||| ||| |||| ||||||||| ||||| ||||||||||||||||    
T  46989480 agagaattgttgtttacacatttaataaggttgtgtcatacgagtaaatgacgtttttgccctctcggcagttaactaccgagaaatttgaattccggct 46989579  T
Q  341 gcagtatactgctgaggaaaa 361  Q
    |||||  ||||| ||||||||    
T  46989580 gcagttaactgccgaggaaaa 46989600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 422
Target Start/End: Complemental strand, 6506067 - 6505909
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatat 364  Q
    ||||||||| | ||||| |||||  |||| ||||  ||||||   ||||||||||| |||||||   |  |||||||||||  ||||| |||||| || |    
T  6506067 ataaggctgaggcacacgagtaatttacgtttttgtcccctcagaagttaactgccaaggaattaagaaaccggctgcagttaactgccgaggaatatgt 6505968  T
Q  365 ttcatccgatgaaacatccacatgctc-cccctacacactattttcttcatcaccttca 422  Q
    |||||| ||||||||| |||||||||| |||||||| ||||||||| |||||| |||||    
T  6505967 ttcatcagatgaaacagccacatgctcccccctacatactattttcatcatcaacttca 6505909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 16444674 - 16444736
Alignment:
Q  361 atatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||| ||||||    
T  16444674 atatttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcat 16444736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 2743391 - 2743451
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||    
T  2743391 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 2743451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 13743286 - 13743346
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||    
T  13743286 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 13743346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 30947660 - 30947587
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| ||||||||||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  30947660 actgccgagggaaatgtttcatccgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 30947587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 36817518 - 36817455
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  36817518 aaatgtttcatcggatgaaacagccacctgctcccc-tacacactattttcttcatcaccttcat 36817455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 66850 - 66917
Alignment:
Q  257 cacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgagg 324  Q
    ||||| ||||||||||| | ||||| ||||||||||| |||| |||||||| ||||||||||||||||    
T  66850 cacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcagttaactgccgagg 66917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 50216993 - 50216890
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| |||||||| |||| ||||| |||||   ||| |||| |||| | | ||||||||||||||||||||  || ||||||||    
T  50216993 gagaattgttgttcccacatttgataaggttgtggcacacgagtaattgacgtttttgccccattggcagttaactgccgaggaattaaaaatccggctg 50216894  T
Q  342 cagt 345  Q
    ||||    
T  50216893 cagt 50216890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 7247999 - 7247913
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||||| |  |||||  |||||||||| | ||||| | ||||||||| |||| |||||||| ||||||||||||||||||||    
T  7247999 gagaattgttgttgacacattggataaggctgaggcacacgaataaaatacgcttttgccccctcggcagttaactgccgaggaatt 7247913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 7837661 - 7837735
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    |||||||||||| || ||||||| |||||||||  ||| ||||||||||||| ||||||||| |||||| |||||    
T  7837661 actgctgaggaatatgtttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttca 7837735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 13747796 - 13747738
Alignment:
Q  303 cctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||  ||||||||||||||    
T  13747796 cctcggcagttaactgccgatgaatttgaaatccggctgcagttaactgctgaggaaaa 13747738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 6740949 - 6741002
Alignment:
Q  370 ccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||||||| | || |||||||||||||||||| ||||||||||||||||||    
T  6740949 ccgatgaaacagctacctgctccccctacacactactttcttcatcaccttcat 6741002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 34691573 - 34691662
Alignment:
Q  256 ccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||||| |||||| |||| |  ||||||||||||||| ||||| || ||||| |||||||||||||||||| |  || ||||||||||||    
T  34691573 ccacatttgataacgctgagaaacactagtaaaatacaattttgcctcctcggcagttaactgccgaggaaataaaaatccggctgcagt 34691662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 3948795 - 3948868
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| ||||||||||||||||  | || |||||||||||||||||||||  ||||||||||||||    
T  3948795 actgccgagggaaatgtttcatccgatgaaactgctacctgctccccctacacactattt--ttcatcaccttcat 3948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 14403086 - 14402990
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| ||||| ||||   |||  |||| |||||||| |||||||||||||||||||||||| |||||| | |||  ||||| ||||||||    
T  14403086 ataaggctgtgccacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaatccggcggtagttaactgccgaggaaaa 14402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 28611216 - 28611120
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| |||||||||  ||||| |||||||| ||||||||||||||| ||||  ||  |||||||||||  ||||| ||||||||    
T  28611216 ataaggctgagacacacaagtaaaatataattttgccccctcggcagttaactgccgagaaattcaaaaaccggctgcagttaactgccgaggaaaa 28611120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 49217045 - 49217101
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgatttt 298  Q
    ||||||||||| |||||||| |||||||  |||| ||||||||||||||||||||||    
T  49217045 gagaattgttgttcccacatttgataagattgtgccacactagtaaaatacgatttt 49217101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 2433059 - 2432996
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||| ||||| ||||||| |||||||||| |||||||||    
T  2433059 ataaggctgaggcacacgagtaaaatacgcttttatcccctcggcagttaactgtcgaggaatt 2432996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 6740895 - 6740938
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||||| |||||||||||||||||||||||| ||||||||    
T  6740895 taccccctcggcagttaactgccgaggaatttgaaatccggctg 6740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 50957749 - 50957686
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||||||  |||||| ||||||||||||||||| ||||||||||||  ||||| ||||||||    
T  50957749 taccccctctgcagttagctgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 50957686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 325
Target Start/End: Complemental strand, 51696654 - 51696571
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgagga 325  Q
    ||||||||||| | |||||| ||||||||||||| ||||| |||||  |||  |||| ||||||||  ||||||||||||||||    
T  51696654 gagaattgttgttgccacatttgataaggctgtggcacacgagtaatttacttttttgccccctcggtagttaactgccgagga 51696571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 41802973 - 41803051
Alignment:
Q  283 agtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| |||| ||| |||| |||||||||||||| |||||| ||  |||||||||||  ||||| ||||||||    
T  41802973 agtaaaatacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaa 41803051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 8160991 - 8160929
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  8160991 aaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 8160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 19341735 - 19341630
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    |||||| |||||| |||||||| | ||   ||| || ||||| |||||  |||| ||||  ||||||| |||||||||||||||||||| ||| ||||||    
T  19341735 aagagagttgttgttcccacatttcatttagctatggcacacgagtaagttacgtttttgtcccctcggcagttaactgccgaggaattagaaatccggc 19341636  T
Q  340 tgcagt 345  Q
    ||||||    
T  19341635 tgcagt 19341630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 34694515 - 34694454
Alignment:
Q  300 ccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||||| |||||||||| ||||||||| ||| ||||||||||||| ||||| ||| ||||    
T  34694515 ccccctcggcagttaactgtcgaggaattagaaatccggctgcagtaaactgccgagaaaaa 34694454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 4002585 - 4002525
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||| ||||||||| | |||||||||||| ||||||||||||  ||||| ||||||||    
T  4002585 cccctcggcagttaactactgaggaatttgaaatccggctgcagttaactgccgaggaaaa 4002525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 29918457 - 29918361
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||  ||||||||||||||||  ||||||| || |||||||||||  |||| |||  |||||||||||  ||||| ||||||||    
T  29918457 ataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaa 29918361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 29929383 - 29929479
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| ||||||||| |||||| | |||||||||||||||||  ||||||||  ||  ||||||||| |  ||||| ||||||||    
T  29929383 ataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgcaattaactgccgaggaaaa 29929479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 29967610 - 29967514
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||  ||||||||||||||||  ||||||| || |||||||||||  |||| |||  |||||||||||  ||||| ||||||||    
T  29967610 ataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaa 29967514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 29978537 - 29978633
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| ||||||||| |||||| | |||||||||||||||||  ||||||||  ||  ||||||||| |  ||||| ||||||||    
T  29978537 ataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgcaattaactgccgaggaaaa 29978633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 41579840 - 41579744
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||  |||||||||||||||| |||||||| ||||||| ||| ||||||||  |   |||||||||||  ||||| ||||||||    
T  41579840 ataaggctgaggcacataagtaaaatacgatttttccccctcggcagttaattgctgaggaattcaataaccggctgcagttaactgccgaggaaaa 41579744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 46993310 - 46993226
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    |||||||| || || ||||| ||||||||||||| || || ||||||  ||| |||| |||||||| |||||||||| |||||||    
T  46993310 gagaattgctgttcacacatttgataaggctgtgccatacgagtaaatgacgtttttgccccctcggcagttaactgtcgaggaa 46993226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 55385074 - 55385190
Alignment:
Q  245 aattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcag 344  Q
    |||||||| ||||||||   |||||| |||| ||||| |||||   ||| |||| |||||||| |||||||||||||| |  || ||| |||||||||||    
T  55385074 aattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcag 55385173  T
Q  345 tatactgctgaggaaaa 361  Q
    |  ||||| ||||||||    
T  55385174 ttaactgccgaggaaaa 55385190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 9429932 - 9429885
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||||    
T  9429932 taccccctcggcagttaactgccgaggaatttgaaatttggctgcagt 9429885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 11380374 - 11380461
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    |||||||||||| |  ||||| || | |||||| |  |||| ||||||||||| |||| |||| ||| ||||||||||||||||||||    
T  11380374 agagaattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcagttaactgccgaggaatt 11380461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 42804412 - 42804475
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||  |||  ||||||||| |||||||||||||||||||    
T  42804412 ataaggctgaggcacacaagtaaaatacactttagccccctcgatagttaactgccgaggaatt 42804475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 55267398 - 55267461
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| |||||  |||| |||| ||||||||||||||||||||||| |||||    
T  55267398 ataaggctgagacacacgagtaatttacgtttttgccccctcgacagttaactgccgaagaatt 55267461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 42756134 - 42756212
Alignment:
Q  283 agtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| |||| |||||||  |||||||||| |||||||||  || ||||| ||||||  ||||| ||||||||    
T  42756134 agtaaaatacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggttgcagttaactgccgaggaaaa 42756212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 49196567 - 49196485
Alignment:
Q  263 tgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||||||| |  |||| ||||||||||| |||| ||||||||| || |||||| |||||||||  || ||||| ||||||    
T  49196567 tgataaggctgagaaacacgagtaaaatacgtttttgccccctcgatagctaactgtcgaggaattaaaaatccggttgcagt 49196485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 54965003 - 54964917
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccc-tcgacagttaactgccgaggaa 326  Q
    |||||||||||| |||||||| |||||||| || |  | |||| ||||||||||||| |||||| ||| | |||||||| |||||||    
T  54965003 agagaattgttgttcccacatttgataaggttgagaaatactaataaaatacgatttgacccccttcggcggttaactgtcgaggaa 54964917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 11389647 - 11389598
Alignment:
Q  374 tgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| |||| ||||||| ||||| |||||||||||||||| ||||||    
T  11389647 tgaaacaaccacttgctccctctacatactattttcttcatcaacttcat 11389598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 29929508 - 29929565
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttc 421  Q
    |||||||  ||||||||  ||| ||||||||||||||||||||||| |||||| ||||    
T  29929508 tttcatcatatgaaacagtcacctgctccccctacacactattttcatcatcaacttc 29929565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 29978662 - 29978719
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttc 421  Q
    |||||||  ||||||||  ||| ||||||||||||||||||||||| |||||| ||||    
T  29978662 tttcatcatatgaaacagtcacctgctccccctacacactattttcatcatcaacttc 29978719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 43478971 - 43478850
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| ||||||||   |||||| |||| ||||| ||||||  | | ||||  ||||||| ||||||||||| || |  || ||| ||||||    
T  43478971 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgatgtttttgtcccctcggcagttaactgctgaagttttagaaatccggc 43478872  T
Q  340 tgcagtatactgctgaggaaaa 361  Q
    ||||||  ||||| ||||||||    
T  43478871 tgcagttaactgccgaggaaaa 43478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 52567720 - 52567777
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    ||||||||| | ||||| |||||||||||||||| ||  |||| ||||||||||||||    
T  52567720 ataaggctgaggcacacgagtaaaatacgattttgccttctcggcagttaactgccga 52567777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 600683 - 600603
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    ||||||||||| ||||||||   | ||||||| | ||||| ||||||  ||| |||| | |||||||||||||||||||||    
T  600683 gagaattgttgttcccacattgtagaaggctgcggcacacgagtaaatgacgtttttgcgccctcgacagttaactgccga 600603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 5138406 - 5138326
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    |||||||| || |||||||||  ||||||||||| ||||| ||||||  ||| |||| ||||  |||||||||||| ||||    
T  5138406 gagaattgctgttcccacatgacataaggctgtgccacacgagtaaatgacgtttttgcccctacgacagttaactaccga 5138326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 5e-60; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 242 - 423
Target Start/End: Complemental strand, 29593467 - 29593287
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29593467 gagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacaattttaccccctcgacagttaactgccgaggaatttgaattccggctg 29593368  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  ||||| |||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||| ||||||    
T  29593367 cagttaactgccgagg-aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaacttcat 29593287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 301 - 423
Target Start/End: Complemental strand, 618805 - 618683
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacac 400  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||| | || ||||||||||||||    
T  618805 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacac 618706  T
Q  401 actattttcttcatcaccttcat 423  Q
    |||||||||||||||||||||||    
T  618705 actattttcttcatcaccttcat 618683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 42499342 - 42499462
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| ||    
T  42499342 agagaattgttgttcccacatgtgataaggttgtgtcacaccagtaaaatacgattttaccccttcgacagttaattgccgaggaatttgaaatccgact 42499441  T
Q  341 gcagtatactgctgaggaaaa 361  Q
    |||||  ||||| ||||||||    
T  42499442 gcagttaactgccgaggaaaa 42499462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 18105439 - 18105514
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  18105439 actgccgaggaaaatgtttcatccgatgaaacaactacctgctccccctacacactattttcttcatcaccttcat 18105514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 361
Target Start/End: Original strand, 47776266 - 47776385
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||| ||||||||||| |  |||| |||||||||||||||| |||||||||||||||||||||||| ||||  || || |||||    
T  47776266 gagaattgatgttcccacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaactgccgagaaattaaaaatctggctg 47776365  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||| ||||||||    
T  47776366 cagttaactgccgaggaaaa 47776385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 34142740 - 34142655
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    |||||||||||| ||||||||  |||||||  ||| |||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  34142740 agagaattgttgttcccacattcgataaggtagtggcacactagtaaaatacgatttttccccctaggcagttaactgccgaggaa 34142655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 360
Target Start/End: Complemental strand, 27453733 - 27453615
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| || ||||| ||||||||||  |  |||  |||||||||||| ||| |||||||| ||||||||||||||||||||  || ||||||||    
T  27453733 gagaattgttgttcacacatttgataaggcttagaaacataagtaaaatacgactttgccccctcggcagttaactgccgaggaattaaaaatccggctg 27453634  T
Q  342 cagtatactgctgaggaaa 360  Q
    ||||  ||||| |||||||    
T  27453633 cagttaactgccgaggaaa 27453615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 36186588 - 36186493
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||||||||| ||||||||||| |||| |||||||| ||||||| |||||||||||| |||  |||| ||||||  ||||| ||||||||    
T  36186588 ataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaattcgaa-accggttgcagttaactgccgaggaaaa 36186493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 240 - 323
Target Start/End: Complemental strand, 40590632 - 40590549
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgag 323  Q
    ||||||||||||| |||||||| ||||||||||| |  |||| | ||||||||| |||| |||||||| |||||||||||||||    
T  40590632 aagagaattgttgttcccacatttgataaggctgagaaacacgaataaaatacgtttttgccccctcggcagttaactgccgag 40590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 43686987 - 43686906
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgag 323  Q
    |||||||| || |||||||| |||||||| |||| |||||||||||||||||||||| ||| |||   ||||||||||||||    
T  43686987 gagaattgctgttcccacatttgataaggttgtgccacactagtaaaatacgattttgccctctcagtagttaactgccgag 43686906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 423
Target Start/End: Original strand, 47741787 - 47741878
Alignment:
Q  331 aattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||||||||||||||  ||||  ||||||| | ||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||    
T  47741787 aattccggctgcagttaactgtcgaggaaa-tgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcat 47741878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 360
Target Start/End: Original strand, 39460487 - 39460605
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |   |||| |||||||| || |  |||| ||||||||||||||||| || |||| ||||| | ||||||||||||  || ||||||||    
T  39460487 gagaattgttgtttatacatttgataaggttgagaaacacgagtaaaatacgattttatcctctcggcagttgattgccgaggaattaaaaatccggctg 39460586  T
Q  342 cagtatactgctgaggaaa 360  Q
    ||||  |||||||||||||    
T  39460587 cagttaactgctgaggaaa 39460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 30786591 - 30786664
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| ||||||||||||||||| | || |||||||||| ||||||||||  ||||||||||||||    
T  30786591 actgccgagggaaatgtttcatccgatgaaacagctacctgctccccctgcacactattt--ttcatcaccttcat 30786664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 43033040 - 43033113
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  43033040 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 43033113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 34742522 - 34742415
Alignment:
Q  254 tcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgct 353  Q
    |||||||| ||||||||||||| ||||| |||||  |||| |||| | |||||| ||||||| || ||||||||| ||| || | |||||||  |||||     
T  34742522 tcccacatttgataaggctgtggcacacgagtaatttacgttttttctccctcggcagttaattgtcgaggaattagaaatctgactgcagttaactgcc 34742423  T
Q  354 gaggaaaa 361  Q
    ||||||||    
T  34742422 gaggaaaa 34742415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 42499490 - 42499549
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| |||||||||  ||| ||||||||||||||| |||||||||||||| ||||||    
T  42499490 tttcatcagatgaaacagtcacctgctccccctacacattattttcttcatcaacttcat 42499549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 362
Target Start/End: Original strand, 45361584 - 45361703
Alignment:
Q  243 agaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgc 342  Q
    |||||||||| |||||||| ||||||||||  |  |||  ||||||||| | |||| | |||||| |||||||||| |||||||||  || |||||||||    
T  45361584 agaattgttgttcccacatttgataaggctaagaaacatgagtaaaatatgtttttgctccctcggcagttaactgacgaggaattaaaaatccggctgc 45361683  T
Q  343 agtatactgctgaggaaaat 362  Q
    |||  ||||| ||| |||||    
T  45361684 agttaactgccgagaaaaat 45361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 46860468 - 46860531
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||| |||| |||||||| |||||||||| |||||||||    
T  46860468 ataaggctgaggcacacaagtaaaatacgcttttgccccctcggcagttaactgtcgaggaatt 46860531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 47741712 - 47741782
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgaca 310  Q
    ||||||||||||| || |||||   |||||| |||| ||||||||||||||||| |||| |||||||||||    
T  47741712 aagagaattgttgttctcacattacataaggttgtgccacactagtaaaatacgtttttgccccctcgaca 47741782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 9494947 - 9494826
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    |||| |||||||| |  ||||| | ||||||||| | ||||| ||||||||| |  | | |||||||| ||||||||||||||||||||  ||  |||||    
T  9494947 aagaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcagttaactgccgaggaattaaaaaaccggc 9494848  T
Q  340 tgcagtatactgctgaggaaaa 361  Q
    ||||||  ||||| ||||||||    
T  9494847 tgcagttaactgccgaggaaaa 9494826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 43624142 - 43624080
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  43624142 aaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 43624080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 46740634 - 46740679
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaa 287  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||    
T  46740634 gagaattgttgttcccacatttgataaggctgtgacacactagtaa 46740679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 34139843 - 34139947
Alignment:
Q  254 tcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgct 353  Q
    |||||||| |||||||| |||| ||||| |||||  |||| |||| |||| |||  | ||||||||||| ||||| ||| ||||||||||||  |||||     
T  34139843 tcccacatttgataaggttgtggcacacgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgcc 34139942  T
Q  354 gagga 358  Q
    |||||    
T  34139943 gagga 34139947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 45763446 - 45763506
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactatttt 408  Q
    ||||| |||| |||| |||||| |||||||||| | || ||||||||||||||||||||||    
T  45763446 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactatttt 45763506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 46863460 - 46863380
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||||| | ||||| ||||||||||| |||| |||| ||| ||||||||||||||| ||||  ||  |||||||||||    
T  46863460 ataaggctgagacacacaagtaaaatacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggctgcagt 46863380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 48829895 - 48829963
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcga 308  Q
    ||||||||||||| |||||||| |||||||| |||| ||||| |||||  |||| |||| |||||||||    
T  48829895 aagagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgccccctcga 48829963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 36392094 - 36392145
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||| ||||||||||| |||| |||||||||||||||||||  ||||||||    
T  36392094 cacacaagtaaaatacgtttttgccccctcgacagttaactgttgaggaatt 36392145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 47060884 - 47060947
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | || || ||||||||||| |||| |||||||| |||||||||| |||||||||    
T  47060884 ataaggctgaggcatacaagtaaaatacgtttttgccccctcggcagttaactgtcgaggaatt 47060947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 48316401 - 48316319
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    |||||| |||||| |  ||||| | ||||||||| | ||||| ||||||||| | |||| |||||| ||||||||||||||||    
T  48316401 aagagatttgttgttggcacatttcataaggctgagacacacaagtaaaataagtttttgcccccttgacagttaactgccga 48316319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 21185594 - 21185639
Alignment:
Q  283 agtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    |||||||||||||||| || ||||| |||||||||||||| |||||    
T  21185594 agtaaaatacgattttgcctcctcggcagttaactgccgaagaatt 21185639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 36185805 - 36185853
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||||||||||    
T  36185805 cacacaagtaaaatacgattttgccccctcggcagtt-actgccgaggaa 36185853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 243 - 423
Target Start/End: Original strand, 31957769 - 31957948
Alignment:
Q  243 agaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgc 342  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  31957769 agaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcgacagctaactaccgaggaatttgaattccggctgc 31957868  T
Q  343 agtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||  ||| | |||| |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  31957869 agttaactaccgagg-aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 31957948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 241 - 423
Target Start/End: Complemental strand, 41744834 - 41744653
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||||||| |||||    
T  41744834 agagaattgttgttcccacatttgataaagttgtgtcacactagtaaaatacgattttaccccttcgacaaataactgtcgaggaatttgaatttcggct 41744735  T
Q  341 gcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    || ||  |||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  41744734 gccgttaactgctgagg-aaatgtttcatcagatgaaacagccacatgctccccctacacactattttcatcatcaacttcat 41744653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 240 - 423
Target Start/End: Original strand, 45454338 - 45454521
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| |||||||| ||||||| ||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||     
T  45454338 aagagaattgttgttcccacatttgataagactgtggcacactagtaaaatacgattttgcctcctcggcagttaactgccgaggaatttgaaatccgga 45454437  T
Q  340 tgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||  ||||| |||||| || ||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||    
T  45454438 tgcagttaactgccgaggaatatgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcat 45454521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 42981554 - 42981648
Alignment:
Q  146 taagtaaataaatgaaactgaaacaggtggtgttcaaggagtgagaagttgcggtaaatggataggaattttcatcatcaaataaaatcctaaga 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42981554 taagtaaataaatgaaactgaaacaggtggtgttcaaggagtgagaagttgcggtaaatggataggaattttcatcatcaaataaaaacctaaga 42981648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 241 - 360
Target Start/End: Original strand, 1114676 - 1114795
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  1114676 agagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgccgagaaatttgaaatccggct 1114775  T
Q  341 gcagtatactgctgaggaaa 360  Q
    |||||  ||||| |||||||    
T  1114776 gcagttaactgccgaggaaa 1114795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 242 - 339
Target Start/End: Original strand, 20546787 - 20546884
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  20546787 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactaccgaggaatttgaattccggc 20546884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 42981052 - 42981144
Alignment:
Q  17 atgtatcacattcaaaggtataatgggtggattacaatagaatggtcgtatttttagtaaacgt-gttgaccattgctcctcaatcaaatcaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  42981052 atgtatcacattcaaaggtataatgggtggattacaatagaatggtcgtatttatagtaaacgtggttgaccattgctactcaatcaaatcaa 42981144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 35966890 - 35966785
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| ||||| || |||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||| |    
T  35966890 aagagaattgttgttcccatatttgataaggttgtgtcacactagtaaaatacaattttgccccctcggcagttaactgccgaggaatttgaaatccgac 35966791  T
Q  340 tgcagt 345  Q
    ||||||    
T  35966790 tgcagt 35966785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 35962264 - 35962360
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| |||| ||||||||||||||||| ||| |||| |||||||||| ||||||||||||| ||||||| ||||  ||||| ||||||||    
T  35962264 ataaggctgtgccacattagtaaaatacgattttgccctctcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaa 35962360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 43188005 - 43188106
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| || ||||| ||||||||||| |  |||| |||||||||||||||| |||||||||||||||| || |||||||||  || ||||||    
T  43188005 aagagaattgttgttctcacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaattgtcgaggaattaaaaatccggc 43188104  T
Q  340 tg 341  Q
    ||    
T  43188105 tg 43188106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 326
Target Start/End: Complemental strand, 39847069 - 39846986
Alignment:
Q  243 agaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    |||||||||| |||||||| ||||||||||| |  |||| ||||||||| |||||| |||||||| ||||||||||||||||||    
T  39847069 agaattgttgttcccacatttgataaggctgagaaacacgagtaaaataagattttgccccctcgccagttaactgccgaggaa 39846986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 7340133 - 7340206
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  7340133 actgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 7340206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 361
Target Start/End: Original strand, 3641580 - 3641699
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||| |||||||||| || ||||| |||||  |||| |||| |||||||||||||||| | | || ||||| ||| | ||||||    
T  3641580 gagaattgatgttcccacatttgataaggctatggcacacgagtaatttacgtttttgccccctcgacagttaattactgatgaattagaacttcggctg 3641679  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||||||||||||    
T  3641680 cagttaactgctgaggaaaa 3641699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 5304283 - 5304197
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||||| || ||||| |||||||||||    |||| ||||||||||| ||||||||||||| |||||||||||| |||||||    
T  5304283 gagaattgttgttcacacatttgataaggctgaaaaacacgagtaaaatacgtttttaccccctcggcagttaactgccaaggaatt 5304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 34234516 - 34234601
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    |||||||||||| |  ||||| ||||||||||||| ||||| ||||||  ||| |||||||||||||  |||||||||||||||||    
T  34234516 agagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggtagttaactgccgaggaa 34234601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 44052367 - 44052262
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| ||||||||   |||||| |||| ||||| ||||||  ||| |||| ||||||||  |||||| |||||||||||||| | ||||||    
T  44052367 aagagaattgttgttcccacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtagttaattgccgaggaatttgcaatccggc 44052268  T
Q  340 tgcagt 345  Q
    ||||||    
T  44052267 tgcagt 44052262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 7168045 - 7168141
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| |||||||||||||||| |||||||||| |||| ||||||| |||||  ||  |||||||||||  ||||| ||||||||    
T  7168045 ataaggctgaggcacacaagtaaaatacgattttgccccctcgactgttagctgccgaagaattcaaaaaccggctgcagttaactgccgaggaaaa 7168141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 328
Target Start/End: Complemental strand, 18441582 - 18441494
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||||||| |  ||||| | ||||||||| | ||||| ||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  18441582 aagagaattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaatt 18441494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 423
Target Start/End: Complemental strand, 30305627 - 30305503
Alignment:
Q  298 taccccctcgacagttaactgccgaggaattt-gaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccct 396  Q
    ||||| |||| ||||||||||||||||  ||| | |  ||||| |||||  ||| | ||||||||| ||||||| ||||||||| | || ||||||||||    
T  30305627 taccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaaaatgtttcatctgatgaaacaactacctgctccccct 30305528  T
Q  397 acacactattttcttcatcaccttcat 423  Q
    |||||||||||  ||||||||||||||    
T  30305527 acacactattt--ttcatcaccttcat 30305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 365
Target Start/End: Complemental strand, 41276999 - 41276876
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| |||||||| |||  ||||| |||||  |||  |||| |||||||| ||||||||||  |||||||| ||| | ||||||    
T  41276999 gagaattgttgttcccacatttgataaggatgttgcacacgagtaatttacttttttgccccctcggcagttaactgttgaggaattagaaattcggctg 41276900  T
Q  342 cagtatactgctgaggaaaatatt 365  Q
    ||||  ||||| ||| ||||||||    
T  41276899 cagttaactgccgagaaaaatatt 41276876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 41743877 - 41743927
Alignment:
Q  295 ttttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  41743877 ttttgccccctcgatagttaactgccgaggaatttgaaatccggctgcagt 41743927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 422
Target Start/End: Complemental strand, 39753069 - 39752957
Alignment:
Q  309 cagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactatttt 408  Q
    ||||||||||||||||||||||||  |||||||||||  | | | |||||| || ||||||| ||||||||||  || |  |||||||||| ||||||||    
T  39753069 cagttaactgccgaggaatttgaa-accggctgcagttaaataccgaggaatatgtttcatcagatgaaacatatacctattccccctacatactatttt 39752971  T
Q  409 cttcatcaccttca 422  Q
    | |||||| |||||    
T  39752970 catcatcaacttca 39752957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 32378928 - 32378855
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  32378928 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 32378855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 32432883 - 32432810
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  32432883 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 32432810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 35966746 - 35966682
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||    
T  35966746 aaatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcat 35966682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 39601661 - 39601757
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||| ||||| ||||||  ||| |||||||  ||||||||||||||||||| |  || ||| ||||||||||||  ||||| ||||||||    
T  39601661 ataaggctgtgccacacgagtaaatgacgtttttaccttctcgacagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaa 39601757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 1114824 - 1114882
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||| |||||||| ||||||||||||||||||||| ||||||    
T  1114824 tttcatcagatgaaacagccacctgctcccc-tacacactattttcttcatcaacttcat 1114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 20549318 - 20549268
Alignment:
Q  295 ttttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||| |||||||| |||||||||||||||||||||||| | ||||||||||    
T  20549318 ttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcagt 20549268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 39751043 - 39751126
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||| ||||||||||| |||| |||||| | || ||||||||||| |||||||||  |||||||||||  ||||| ||||||||    
T  39751043 cacacgagtaaaatacgtttttgcccccttggcaattaactgccgatgaatttgaa-accggctgcagttaactgccgaggaaaa 39751126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 407
Target Start/End: Original strand, 18205868 - 18205911
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattt 407  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||    
T  18205868 tttcatcagatgaaacagccacctgctccccctacacactattt 18205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 43262358 - 43262474
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| || |||||   ||||||||||| ||||| ||||||  ||| ||||||||||||| |    |||| |||||| ||||||| ||| |||    
T  43262358 agagaattgttgttctcacattacataaggctgtgccacacgagtaaatgacgtttttaccccctcggc----aacttccgaggtatttgaaatccagct 43262453  T
Q  341 gcagtatactgctgaggaaaa 361  Q
    |||||  ||||| ||||||||    
T  43262454 gcagttaactgccgaggaaaa 43262474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 422
Target Start/End: Complemental strand, 2146940 - 2146890
Alignment:
Q  372 gatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||||||| |||| ||||||||||||| ||||||||| |||||| |||||    
T  2146940 gatgaaacagccacctgctccccctacatactattttcatcatcaacttca 2146890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 26455784 - 26455734
Alignment:
Q  278 acactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  26455784 acacgagtaaaatacggttttaccctctcggcagttaactgcggaggaatt 26455734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 35389590 - 35389648
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||||| ||||||||| |||  ||||||||||||| ||||||||| |||||| |||||    
T  35389590 tttcatcagatgaaacaaccatctgctccccctacatactattttcatcatcaacttca 35389648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 359
Target Start/End: Complemental strand, 41858260 - 41858143
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |  ||||| | ||| ||||| |  |||| ||||||||||| |||| |||||||| |||||||||| ||| |||||  ||  |||||||    
T  41858260 gagaattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccggctg 41858161  T
Q  342 cagtatactgctgaggaa 359  Q
    ||||  ||||| ||||||    
T  41858160 cagttaactgccgaggaa 41858143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 1116260 - 1116224
Alignment:
Q  309 cagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  1116260 cagttaactgtcgaggaatttgaaatccggctgcagt 1116224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 2147028 - 2146977
Alignment:
Q  309 cagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||| ||||||||    
T  2147028 cagttaactgccggggaatttgaa-accggctgcagtaaactgccgaggaaaa 2146977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 3395861 - 3395913
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaattt 329  Q
    ||||| ||||||||| | |||| |||||||  |||||||||||||||||||||    
T  3395861 cacacaagtaaaatatgtttttgccccctcagcagttaactgccgaggaattt 3395913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 5300680 - 5300756
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaact 317  Q
    |||||||||||| |  ||||| |||||||| || |  |||| ||||||||||| ||||  |||||||||||||||||    
T  5300680 agagaattgttgttgacacatttgataaggttgagaaacacgagtaaaatacgtttttgtcccctcgacagttaact 5300756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 7172685 - 7172625
Alignment:
Q  283 agtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgca 343  Q
    ||||||||||| |||| |||| || |||||||||||||||| ||||| ||  |||||||||    
T  7172685 agtaaaatacgtttttgccccatcaacagttaactgccgagaaattttaaaaccggctgca 7172625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 18205743 - 18205823
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||||| |  |||| ||||||||||| ||||||| ||||| | |||||||||||| |||||  ||  |||||||||||    
T  18205743 ataaggctgagaaacacgagtaaaatacgtttttaccacctcggcggttaactgccgaagaattcaaaaaccggctgcagt 18205823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 38873010 - 38872950
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||| ||||||||| ||||||||||| ||  |||||||||||  ||||| ||||||||    
T  38873010 cccctcgtcagttaactaccgaggaatttaaaaaccggctgcagttaactgccgaggaaaa 38872950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 345
Target Start/End: Complemental strand, 39939355 - 39939251
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||| ||| ||||||||   |||||| |||||||||| ||||||  ||| |||| | |||||||||||||| || ||| |  || ||| |||||||    
T  39939355 agagaattattgttcccacattacataaggatgtgtcacacgagtaaatgacgtttttgctccctcgacagttaattgtcgaagttttagaaatccggct 39939256  T
Q  341 gcagt 345  Q
    |||||    
T  39939255 gcagt 39939251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 40077390 - 40077270
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |  ||||| ||||||||||| |  |||| ||||||||||| |||| ||||||| || || ||||| | ||| |||  || |||| ||    
T  40077390 agagaattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcaacggtaaactgtcaaggtattaaaaatccgact 40077291  T
Q  341 gcagtatactgctgaggaaaa 361  Q
    |||||  ||||| ||||||||    
T  40077290 gcagttaactgccgaggaaaa 40077270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 242 - 423
Target Start/End: Original strand, 11235 - 11415
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11235 gagaattgctgttcccacatttgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattccggctg 11334  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  ||| | |||| |||| ||||||| ||||||||| |||| ||||||||||||| |||||||||||||||| ||||||    
T  11335 cagttaacttccgagg-aaatgtttcatcagatgaaacagccacctgctccccctacatactattttcttcatcaacttcat 11415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 16034 - 15975
Alignment:
Q  302 ccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||| |||||||||||||||||||||||| ||| ||||||||  ||||| ||||||||    
T  16034 ccctcggcagttaactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaa 15975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 6e-44; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 239 - 361
Target Start/End: Complemental strand, 27276516 - 27276394
Alignment:
Q  239 gaagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccgg 338  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  27276516 gaagagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgctgaggaatttgaaatccgg 27276417  T
Q  339 ctgcagtatactgctgaggaaaa 361  Q
    |||||||  ||||| ||||||||    
T  27276416 ctgcagttaactgccgaggaaaa 27276394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 298 - 423
Target Start/End: Original strand, 38945752 - 38945877
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctcccccta 397  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||| ||||||| ||||||||| | || |||||||||||    
T  38945752 taccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatctgatgaaacagctacctgctcccccta 38945851  T
Q  398 cacactattttcttcatcaccttcat 423  Q
    ||||||||||||||||||||||||||    
T  38945852 cacactattttcttcatcaccttcat 38945877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 24749618 - 24749738
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |    
T  24749618 aagagaattgctgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactaccgaggaatttgaattccgac 24749717  T
Q  340 tgcagtatactgctgaggaaa 360  Q
    || |||  ||||| |||||||    
T  24749718 tgtagttaactgccgaggaaa 24749738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 242 - 423
Target Start/End: Complemental strand, 20951184 - 20951005
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||||||||||||||||| ||||| |||||| |||     | |||  ||| |||||||||||||||||||||||| ||||||||    
T  20951184 gagaattgctgttcccacatgtgataaggctgtgccacaccagtaaattacctaaatgccct-tcggcagttaactgccgaggaatttgaaatccggctg 20951086  T
Q  342 cagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||  ||||| ||||| | | ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  20951085 cagttaactgccgaggaca-tgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 20951005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 423
Target Start/End: Complemental strand, 1101193 - 1101011
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| ||||| || |||||||| ||||  | |||||||||||| |||||| | |||||| |||||||||||||| ||||||||| ||||||    
T  1101193 aagagaattgttgttcccatatttgataaggttgtgctatactagtaaaatatgattttgctccctcggcagttaactgccgatgaatttgaaatccggc 1101094  T
Q  340 tgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    || |||  ||||| ||||||||| ||||||| ||||||| |  ||| |||| |||||||| ||||||||| |||||| ||||||    
T  1101093 tgtagttaactgccgaggaaaatgtttcatcagatgaaaaagtcacctgct-cccctacatactattttcatcatcaacttcat 1101011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 361
Target Start/End: Original strand, 1096533 - 1096648
Alignment:
Q  246 attgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||||| | |||||| |||||||| |||| |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| ||||||||||||    
T  1096533 attgttgtttccacatttgataaggttgtggcacactagtaaaatacgattttgccccctcggctgttaactgccgaggaatttgaaatccggctgcagt 1096632  T
Q  346 atactgctgaggaaaa 361  Q
      ||||| ||||||||    
T  1096633 taactgccgaggaaaa 1096648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 423
Target Start/End: Original strand, 1149405 - 1149596
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||| | |||||| |||||||||||||||||||||||| ||||  |    
T  1149405 agagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacgattttgctccctcggcagttaactgccgaggaatttgaaatccgatt 1149504  T
Q  341 gcagtatactgctgaggaaaatat-----ttcatccgatgaaa----catccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||||  ||||  ||||||||  |     |||||| |||||||    || |||| ||||||||||||| ||||||||| |||||| ||||||    
T  1149505 gcagttaactgtcgaggaaaacctcggtattcatcagatgaaacagccagccacctgctccccctacatactattttcatcatcaacttcat 1149596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 309 - 423
Target Start/End: Complemental strand, 3803615 - 3803502
Alignment:
Q  309 cagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactatttt 408  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| ||||||| | ||||||  ||||||||| |||| ||||||||||||||||||||||    
T  3803615 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaa-tgtttcattagatgaaacagccacctgctccccctacacactatttt 3803517  T
Q  409 cttcatcaccttcat 423  Q
    |||||||| ||||||    
T  3803516 cttcatcaacttcat 3803502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 7262970 - 7263045
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaact 317  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||||    
T  7262970 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaataccattttaccccctcggcagttaact 7263045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 34639453 - 34639334
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || |||||||| ||||||||||||| |||||||||||  |||  |||| |||||||| ||| ||||||||||| ||||  || ||||||||    
T  34639453 gagaattgatgttcccacatttgataaggctgtgccacactagtaatttacttttttgccccctcggcaggtaactgccgagaaattaaaaatccggctg 34639354  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||||||||||||    
T  34639353 cagttaactgctgaggaaaa 34639334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 7263093 - 7263157
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  7263093 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 7263157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 316
Target Start/End: Original strand, 25964738 - 25964812
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaac 316  Q
    ||||||||||| |||||||| ||||||||||| |  |||| |||||||||||||||| |||||||| ||||||||    
T  25964738 gagaattgttgttcccacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcggcagttaac 25964812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 41183231 - 41183157
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||| ||||||||| ||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| |||||    
T  41183231 actgccgaggaaaatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttca 41183157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 18003279 - 18003206
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || |||||||||| ||||||||||  ||||||||||||||    
T  18003279 actgccgaggaaaatgtttcatccgatgaaacagctacctgctccccctgcacactattt--ttcatcaccttcat 18003206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 45475397 - 45475493
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| |||||||||||||||| |||||||| ||||||||||||||| ||||  ||  |||||| ||||  ||||| ||||||||    
T  45475397 ataaggctgagacacacaagtaaaatacgattttgccccctcggcagttaactgccgagaaattcaaaaaccggctacagttaactgccgaggaaaa 45475493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 39794044 - 39794103
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||||||||||| ||||||    
T  39794044 tttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcat 39794103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 41181394 - 41181457
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||    
T  41181394 ataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccgaggaatt 41181457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 435424 - 435482
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||| |||||    
T  435424 tttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaacttca 435482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 328
Target Start/End: Original strand, 23786062 - 23786144
Alignment:
Q  246 attgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||| |||||| | ||||||||||| |  ||| |||||||||| ||||||  ||||||| ||||||||||||||||||||    
T  23786062 attgttgttcccacgtttgataaggctgagaaacattagtaaaatatgattttgtcccctcggcagttaactgccgaggaatt 23786144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 27276360 - 27276310
Alignment:
Q  373 atgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  27276360 atgaaacagccacctgctccccctacacactattttcttcatcaacttcat 27276310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 364
Target Start/End: Complemental strand, 35493484 - 35493358
Alignment:
Q  238 agaagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccg 337  Q
    ||||||||||||||| |  |||||   |||||| || | ||||| ||||||||||| |||| ||||||||  |||||||||||||||||||  ||  ||     
T  35493484 agaagagaattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtagttaactgccgaggaattcaaaaacca 35493385  T
Q  338 gctgcagtatactgctgaggaaaatat 364  Q
    ||||||||  ||||| |||||||||||    
T  35493384 gctgcagttaactgccgaggaaaatat 35493358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 372 - 422
Target Start/End: Complemental strand, 41008911 - 41008861
Alignment:
Q  372 gatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||    
T  41008911 gatgaaacagccacatgctccccctacacactattttcatcatcaacttca 41008861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 41560070 - 41560144
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgct-ccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || |||| |||||||||||||||||  ||||||||||||||    
T  41560070 actgccgaggaaaatgtttcatccgatgaaacagctacctgctcccccctacacactattt--ttcatcaccttcat 41560144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 213459 - 213386
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| |||||| |||||||||| | || ||||||||||||||| |||||  ||||||||||||||    
T  213459 actgccgaggaaaatgtttcatacgatgaaacagctacctgctccccctacacattattt--ttcatcaccttcat 213386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 3795330 - 3795390
Alignment:
Q  301 cccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||  ||||| ||||||||    
T  3795330 cccctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaa 3795390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 10624472 - 10624399
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  10624472 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 10624399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 25184933 - 25184850
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||| ||||||||||| |||| |||||||  |||||||||| |||||||||||||  |||||||||||  ||||| ||||||||    
T  25184933 cacacgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaatttgaa-accggctgcagttaactgccgaggaaaa 25184850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 19187339 - 19187276
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  19187339 ataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaatt 19187276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 29093971 - 29093892
Alignment:
Q  243 agaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    |||||||||| ||||||||   ||||||||||| ||||| |||||  |||  |||| |||||||||||||||||||||||    
T  29093971 agaattgttgttcccacattacataaggctgtggcacacgagtaatttactcttttgccccctcgacagttaactgccga 29093892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 5334634 - 5334701
Alignment:
Q  354 gaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||||| |||||| |||||| ||| | || |||||||||||||||||||||  ||||||||||||||    
T  5334634 gaggaaaatgtttcatacgatgatacagctacctgctccccctacacactattt--ttcatcaccttcat 5334701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 24512137 - 24512187
Alignment:
Q  278 acactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    |||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  24512137 acacaagtaaaatacgtttttaccccctcgacagttaactgttgaggaatt 24512187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 361
Target Start/End: Original strand, 2917615 - 2917736
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    |||| |||||||| |  ||||| | ||||||||| | ||||  ||||||||||| |||| |||||||| ||||||||||||||| ||||  ||  |||||    
T  2917615 aagaaaattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggc 2917714  T
Q  340 tgcagtatactgctgaggaaaa 361  Q
    | ||||  ||||| ||||||||    
T  2917715 tacagttaactgccgaggaaaa 2917736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 7190090 - 7189971
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    ||||||||| || ||||||||   |||||| |||| ||||| |||||| |||| |||| |||| ||| |||||||||||||| |  || ||| |||||||    
T  7190090 agagaattgatgttcccacattacataaggttgtgccacacgagtaaattacgtttttgcccc-tcggcagttaactgccgaagttttagaaatccggct 7189992  T
Q  341 gcagtatactgctgaggaaaa 361  Q
    |||||  ||||| ||||||||    
T  7189991 gcagttaactgccgaggaaaa 7189971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 19186704 - 19186800
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| ||||||||||| ||||||||| ||| |||| |||||||||| ||||  ||   ||||||||||  |||||| |||||||    
T  19186704 ataaggctgagacacacaagtaaaatacgtttttaccccatcggcagtaaactgccgagcaattcaaaaagcggctgcagttaactgctaaggaaaa 19186800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 24749753 - 24749789
Alignment:
Q  387 tgctccccctacacactattttcttcatcaccttcat 423  Q
    |||||||||||||||||||||||||||||| ||||||    
T  24749753 tgctccccctacacactattttcttcatcaacttcat 24749789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 35490637 - 35490733
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| ||||||||||  |||| || ||||||| |||||||||||| |||||  ||  |||||||||||  |||||||| |||||    
T  35490637 ataaggctgagacacacgagtaaaatacatttttgcctcctcgacggttaactgccgaagaattcaaaaaccggctgcagttaactgctgaagaaaa 35490733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 421
Target Start/End: Complemental strand, 43950238 - 43950178
Alignment:
Q  361 atatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttc 421  Q
    |||||||||| |||||||||  ||| | ||||||||||||||||||||| |||||| ||||    
T  43950238 atatttcatcagatgaaacagacacctactccccctacacactattttcatcatcaacttc 43950178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 43493373 - 43493310
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||| |||| |||||||| |||||||||||  |||||||    
T  43493373 ataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgctaaggaatt 43493310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 45428550 - 45428601
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacg 293  Q
    ||||||||||| |||||||| | ||| ||||||||||||| |||||||||||    
T  45428550 gagaattgttgttcccacatataatatggctgtgtcacacgagtaaaatacg 45428601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 435312 - 435395
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||| |||||  |||| |||| |||||| | |||||||||||||| ||||||||| | ||||||||||| ||| | ||||||||    
T  435312 cacacgagtaatttacgtttttgcccccttggcagttaactgccgatgaatttgaaat-cggctgcagtaaactaccgaggaaaa 435395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 23409605 - 23409521
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||||||||||||||  ||| ||| |||| ||||||| ||||||||||||  ||  | |||||||||  ||||| ||||||||    
T  23409605 cacactagtaaaatacgcgtttgccctctcggcagttaattgccgaggaattcaaaaactggctgcagttaactgccgaggaaaa 23409521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 422
Target Start/End: Complemental strand, 24607580 - 24607512
Alignment:
Q  354 gaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    |||||| || |||||||  ||||||||  ||| ||||||||||||| ||||||||| |||||| |||||    
T  24607580 gaggaatatgtttcatcaaatgaaacagtcacctgctccccctacatactattttcatcatcaacttca 24607512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 45137569 - 45137469
Alignment:
Q  245 aattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcag 344  Q
    ||||||||  || |||| |||||||||||    |||| |||||||||||||||| || ||| | ||||||| ||||||||||||  || | |||||||||    
T  45137569 aattgttgtacctacatttgataaggctgataaacacgagtaaaatacgattttgcctccttggcagttaattgccgaggaattaaaaattcggctgcag 45137470  T
Q  345 t 345  Q
    |    
T  45137469 t 45137469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 242 - 361
Target Start/End: Original strand, 9889928 - 9890047
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  9889928 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 9890027  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||| ||||||||    
T  9890028 cagttaactgccgaggaaaa 9890047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 360
Target Start/End: Original strand, 41023319 - 41023438
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| ||||||||||||||||||| || ||||| | ||||||||||||||||| ||| | ||||||||||||||| |||||||| |||||||    
T  41023319 agagaattgttgttcccacatgtgataaggctctgccacaccaataaaatacgattttacctccttggcagttaactgccgagaaatttgaaatccggct 41023418  T
Q  341 gcagtatactgctgaggaaa 360  Q
    |||||  |||||||||||||    
T  41023419 gcagttaactgctgaggaaa 41023438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 242 - 360
Target Start/End: Original strand, 50274694 - 50274812
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| ||||| ||||||| ||||| |||||  |||| |||| |||||||| |||||||||||||||||||| ||| ||||||||    
T  50274694 gagaattgttgttcccacatttgatagggctgtggcacacgagtaatttacgtttttgccccctcggcagttaactgccgaggaattagaaatccggctg 50274793  T
Q  342 cagtatactgctgaggaaa 360  Q
    ||||  ||||| |||||||    
T  50274794 cagttaactgccgaggaaa 50274812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 56138180 - 56138267
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| || |||||||| |||||||| |||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  56138180 agagaattgctgttcccacatttgataaggttgtgccacactagtaaaatacgattttgccccttcgacagttaactgccgagaaatt 56138267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 50278939 - 50278818
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    ||||||||||||| |||||||| |||||||| |||| ||||| |||||  |||| ||||  |||||||||||||||||| ||| ||||| ||| ||||||    
T  50278939 aagagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgtcccctcgacagttaactgtcgatgaattagaaatccggc 50278840  T
Q  340 tgcagtatactgctgaggaaaa 361  Q
    ||||||  ||||| ||||||||    
T  50278839 tgcagttaactgccgaggaaaa 50278818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 416
Target Start/End: Original strand, 4768610 - 4768786
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggc 339  Q
    |||| |||||||| |  ||||| | |||||||||   ||||| |||||||||  ||||| |||||||| ||||||||||||||||||||  || || |||    
T  4768610 aagaaaattgttgttgacacatttcataaggctgatgcacacaagtaaaatataattttgccccctcggcagttaactgccgaggaattcaaaatctggc 4768709  T
Q  340 tgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatca 416  Q
    ||||||  ||||| ||| || || |||||||  ||||||||  ||| ||||||||||||| ||||||||| ||||||    
T  4768710 tgcagttaactgccgagaaatatgtttcatcatatgaaacagtcacctgctccccctacatactattttcatcatca 4768786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 37394194 - 37394303
Alignment:
Q  254 tcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgct 353  Q
    |||||||| ||||| || |||| |||||||||||||||||||||| || | ||| |||||||||| ||||||||||||| ||||| ||||||  |||||     
T  37394194 tcccacatttgatatggttgtgccacactagtaaaatacgattttgcctcttcggcagttaactgtcgaggaatttgaaatccggatgcagttaactgcc 37394293  T
Q  354 gaggaaaata 363  Q
    |||| |||||    
T  37394294 gaggtaaata 37394303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 8109324 - 8109444
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    |||||||||||| |||||||| ||||||||||| |  |||| ||||||||||||||||||||||| |  ||||||||| |||||||||  |  |||||||    
T  8109324 agagaattgttgttcccacatttgataaggctgagaaacacgagtaaaatacgattttacccccttggtagttaactgtcgaggaattaaatatccggct 8109423  T
Q  341 gcagtatactgctgaggaaaa 361  Q
     ||||  ||||| ||||||||    
T  8109424 acagttaactgccgaggaaaa 8109444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 19073778 - 19073713
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcg 307  Q
    ||||||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||||| |||||    
T  19073778 gagaattgttgttcccacatgtgataaggttgtgccacaccagtaaaatacgattttacctcctcg 19073713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 37395316 - 37395227
Alignment:
Q  257 cacatgtgataaggctgtgtcacactagtaaaatacga-ttttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||| |||||||| |||| |||||||||||||||||| |||| |||||||  || ||||||| ||||||||||||| ||||||||||||    
T  37395316 cacatttgataaggttgtgccacactagtaaaatacgatttttgccccctcagcacttaactgtcgaggaatttgaaatccggctgcagt 37395227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 15999796 - 15999732
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  15999796 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 15999732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 16984285 - 16984181
Alignment:
Q  257 cacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgag 356  Q
    ||||| ||||||||||||| ||||| ||||||  ||| ||||||||||||| |||||||||||||| |  || ||| ||||||||||||  ||||| |||    
T  16984285 cacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgag 16984186  T
Q  357 gaaaa 361  Q
    |||||    
T  16984185 gaaaa 16984181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 9890075 - 9890134
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  9890075 tttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 9890134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 19073647 - 19073588
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  19073647 tttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 19073588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 423
Target Start/End: Complemental strand, 49566533 - 49566409
Alignment:
Q  298 taccccctcgacagttaactgccgaggaattt-gaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctccccct 396  Q
    ||||| |||| ||||||||||||||||  ||| | |  ||||| |||||  ||| | ||||||||| ||||||||||||||||| | || ||||||||||    
T  49566533 taccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaaaatgtttcatccgatgaaacagctacctgctccccct 49566434  T
Q  397 acacactattttcttcatcaccttcat 423  Q
    |||||||||||  ||||||||||||||    
T  49566433 acacactattt--ttcatcaccttcat 49566409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 3403848 - 3403910
Alignment:
Q  309 cagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatcc 371  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||    
T  3403848 cagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatcc 3403910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 362
Target Start/End: Complemental strand, 1044659 - 1044538
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    ||||||||| || ||| |||| |||||| | | || ||||||||||||||| |||||| | || ||| |||||||||| ||| ||||||||| || ||||    
T  1044659 agagaattgatgttccaacatttgataaagttatgccacactagtaaaatatgattttgctccttcggcagttaactgtcgatgaatttgaaatctggct 1044560  T
Q  341 gcagtatactgctgaggaaaat 362  Q
    |||||  ||||| |||||||||    
T  1044559 gcagttaactgccgaggaaaat 1044538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 16983455 - 16983536
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccga 322  Q
    |||||||||||| |  ||||| ||||||||||||| ||||| ||||||  ||| ||||||||||||| ||||||||||||||    
T  16983455 agagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcagttaactgccga 16983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 362
Target Start/End: Original strand, 1041869 - 1041989
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| |||||||||||||  |||| |||||  |||  |||| |||  ||| |||||||||||||||||||| ||| |||| |||    
T  1041869 gagaattgttgttcccacatttgataaggctgtggtacacgagtaatttacttttttgcccgatcggcagttaactgccgaggaattagaaatccgactg 1041968  T
Q  342 cagtatactgctgaggaaaat 362  Q
    ||||  ||||| ||| |||||    
T  1041969 cagttaactgccgagaaaaat 1041989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 1087910 - 1087974
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  1087910 aaatgtttcatcagatgaaacagctacctgctccccctacacactattttcttcatcaacttcat 1087974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 56140757 - 56140689
Alignment:
Q  256 ccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgagg 324  Q
    |||||| |||||||| |||| |||||||||||||| ||||||| |||||||| ||||||||| ||||||    
T  56140757 ccacatttgataaggttgtgccacactagtaaaattcgattttgccccctcggcagttaactaccgagg 56140689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 361
Target Start/End: Original strand, 15995712 - 15995775
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||  ||||| ||||||||    
T  15995712 taccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 15995775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 361
Target Start/End: Original strand, 19069177 - 19069240
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||  ||||| ||||||||    
T  19069177 taccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 19069240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 358
Target Start/End: Original strand, 39588049 - 39588142
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgagga 358  Q
    |||||| |||||||||| ||||||  ||| |||| |||||||| |||||||||||||||||||| ||| | || |||||||  ||||| |||||    
T  39588049 ataaggatgtgtcacacgagtaaatgacgtttttgccccctcggcagttaactgccgaggaattagaaattcgactgcagttaactgccgagga 39588142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 9491392 - 9491295
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggc---tgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccgg 338  Q
    ||||||||||| |||||||| ||||||||    ||||||| |||||||||||||||||||||||||         |||||| |||||||||||| |||||    
T  9491392 gagaattgttgttcccacatttgataaggaggttgtgtcatactagtaaaatacgattttaccccc---------aactgcagaggaatttgaaatccgg 9491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 37959836 - 37959772
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaattt 329  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||| ||||||||||  |||||||||    
T  37959836 ataaggctgaggcacacgagtaaaatacgtttttaccccctcggcagttaactgttgaggaattt 37959772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 13173315 - 13173374
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||||| ||||||||| |||| |||||||||||||  ||||||||||||||| ||||||    
T  13173315 tttcatctgatgaaacagccacctgctccccctacattctattttcttcatcaacttcat 13173374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 15999882 - 15999819
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||| |  ||||| ||||||||    
T  15999882 taccccctcggcagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaa 15999819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 49573016 - 49572953
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||| |||| |||| |||||||||||||| |||||||||    
T  49573016 ataaggctgaggcacacaagtaaaatacgtttttgccccatcgacagttaactgtcgaggaatt 49572953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 21472600 - 21472502
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaata 363  Q
    ||||||||| |  |||| ||||||||||| |||| || ||||| ||||||||||||||||||||  ||   ||||||||||  ||||| ||||||||||    
T  21472600 ataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggctgcagttaactgccgaggaaaata 21472502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 44049180 - 44049238
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| |||||    
T  44049180 tttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttca 44049238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 423
Target Start/End: Original strand, 3403908 - 3403941
Alignment:
Q  390 tccccctacacactattttcttcatcaccttcat 423  Q
    ||||||||||||||||||||||||||||||||||    
T  3403908 tccccctacacactattttcttcatcaccttcat 3403941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 29700418 - 29700322
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||| | ||||| ||||||||||| ||||  | ||||||||||||||||| ||||||||  |   |||||||||||  ||||| ||||||||    
T  29700418 ataaggctgaggcacacaagtaaaatacgcttttgtctcctcgacagttaactgctgaggaattcaataaccggctgcagttaactgccgaggaaaa 29700322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 407
Target Start/End: Complemental strand, 18581323 - 18581280
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattt 407  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||    
T  18581323 tttcatcagatgaaacaaccacctgctccccctacacactattt 18581280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 56304811 - 56304913
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| |||||||| || |  |||| |||||||||| |||||  ||| ||| |||||||||| |||||||||  || || |||||    
T  56304811 gagaattgttgttcccacatttgataaggttgagaaacacgagtaaaatac-atttttgcccatcggcagttaactgtcgaggaattaaaaatctggctg 56304909  T
Q  342 cagt 345  Q
    ||||    
T  56304910 cagt 56304913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 4975831 - 4975905
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||| |||||| || ||||||| |||||||||  ||| ||||||||||||| ||||||||  |||||| |||||    
T  4975831 actgccgaggaatatgtttcatcagatgaaacagtcacctgctccccctacatactatttttatcatcaacttca 4975905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 4979924 - 4979850
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||| |||||| ||  |||||| |||||||||  ||| ||||||||||||| ||||||||| |||||| |||||    
T  4979924 actgccgaggaatatgcttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttca 4979850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 37015864 - 37015949
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    |||||||||||| ||||||||   |||||| |||| ||||  ||||||  ||  |||| |||||||| ||||||||||||||||||    
T  37015864 agagaattgttgttcccacattacataaggatgtgccacatgagtaaatgacatttttgccccctcggcagttaactgccgaggaa 37015949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 41023483 - 41023524
Alignment:
Q  382 ccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||||||||||| |||||||||||||| ||||||    
T  41023483 ccacctgctccccctacacattattttcttcatcaacttcat 41023524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 3450071 - 3450019
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatca 416  Q
    ||||||| |||||||||  | | ||||||||||||||||||||||| ||||||    
T  3450071 tttcatcagatgaaacagtcccctgctccccctacacactattttcatcatca 3450019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 51683216 - 51683276
Alignment:
Q  264 gataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgagg 324  Q
    |||||||||| |  |||| ||||||||||| |||| |||||||  ||||||||||||||||    
T  51683216 gataaggctgagaaacacgagtaaaatacgtttttgccccctcagcagttaactgccgagg 51683276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 242 - 360
Target Start/End: Complemental strand, 17490 - 17372
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  17490 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 17391  T
Q  342 cagtatactgctgaggaaa 360  Q
    ||||  ||||| |||||||    
T  17390 cagttaactgccgaggaaa 17372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 17348 - 17285
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| ||||||| ||| |||||||||||||||||| ||||||    
T  17348 aaatgtttcatcagatgaaacagccacctgctccctcta-acactattttcttcatcaacttcat 17285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 298 - 423
Target Start/End: Original strand, 18347031 - 18347156
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctcccccta 397  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||  ||||| ||||||||| |||||||| |||||||| | || |||||||||||    
T  18347031 taccccctcggcagttaactgccgaggaatctgaaatccggctgcagttaactgccgaggaaaatgtttcatccaatgaaacagctacctgctcccccta 18347130  T
Q  398 cacactattttcttcatcaccttcat 423  Q
    ||||||||||||||||||||||||||    
T  18347131 cacactattttcttcatcaccttcat 18347156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 13388715 - 13388640
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  13388715 actgccgaggaaaatgtttcatccgatgaaacaactacctgctccccctacacactattttcttcatcaccttcat 13388640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 31768687 - 31768790
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||||| |||||||||||||| |||| |||||  |||  |||| |||||||| ||||||||||||||||||||  || ||||||||    
T  31768687 gagaattgttgttcccacatttgataaggctgtgtaacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattaaaaatccggctg 31768786  T
Q  342 cagt 345  Q
    ||||    
T  31768787 cagt 31768790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 28249951 - 28250026
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||  ||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  28249951 actgccgaggaaaatgtttcatttgatgaaacagctacctgctccccctacacactattttcttcatcaccttcat 28250026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 29065674 - 29065777
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||   ||||||||||| ||||| |||||  |||  |||| |||||||| |||||||||||||||||||| ||| ||||||||    
T  29065674 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29065773  T
Q  342 cagt 345  Q
    ||||    
T  29065774 cagt 29065777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 29074687 - 29074790
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||   ||||||||||| ||||| |||||  |||  |||| |||||||| |||||||||||||||||||| ||| ||||||||    
T  29074687 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29074786  T
Q  342 cagt 345  Q
    ||||    
T  29074787 cagt 29074790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 29079451 - 29079554
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||   ||||||||||| ||||| |||||  |||  |||| |||||||| |||||||||||||||||||| ||| ||||||||    
T  29079451 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29079550  T
Q  342 cagt 345  Q
    ||||    
T  29079551 cagt 29079554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 29107260 - 29107363
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||   ||||||||||| ||||| |||||  |||  |||| |||||||| |||||||||||||||||||| ||| ||||||||    
T  29107260 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29107359  T
Q  342 cagt 345  Q
    ||||    
T  29107360 cagt 29107363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 28362875 - 28362751
Alignment:
Q  240 aagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacag---ttaactgccgaggaatttgaattcc 336  Q
    |||||||||| |  ||||||||   ||||||||||| ||||| ||||||  ||| ||||||||| ||| |||   ||||||||||||||||||||| |||    
T  28362875 aagagaattgctattcccacattacataaggctgtgccacacgagtaaatgacgtttttaccccgtcggcagcagttaactgccgaggaatttgaaatcc 28362776  T
Q  337 ggctgcagtatactgctgaggaaaa 361  Q
    |||||||||  ||||| ||||||||    
T  28362775 ggctgcagttaactgccgaggaaaa 28362751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 18610321 - 18610226
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||  |||||| ||||||||||||||||  ||||||||| |  ||||| ||||||||    
T  18610321 ataaggctgtgtcacacgagtaaaatacgtttttgccccttcggtagttaaatgccgaggaatttgaa-accggctgcatttaactgccgaggaaaa 18610226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 29061230 - 29061333
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    |||||||| || ||||||||   ||||||||||| ||||| |||||  |||  |||| |||||||| |||||||||||||||||||| ||| | ||||||    
T  29061230 gagaattggtgttcccacattacataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaattcggctg 29061329  T
Q  342 cagt 345  Q
    ||||    
T  29061330 cagt 29061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 23986097 - 23985955
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatat 364  Q
    ||||||||| | ||||| ||||||||||| |||| |||||| | ||||||||||||||| ||||  ||  |||| ||||||  |||||   | || || |    
T  23986097 ataaggctgagacacacaagtaaaatacgtttttgcccccttggcagttaactgccgagaaattcaaaaaccggttgcagttaactgccatgaaatatgt 23985998  T
Q  365 ttcatccgatgaaacatccacatgctccccctacacactattt 407  Q
    |||||| |||||||||  ||| |||||||||||||||| ||||    
T  23985997 ttcatcagatgaaacagtcacctgctccccctacacaccattt 23985955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 1612754 - 1612681
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| |||| |||| |||||| |||||||||| | || |||||||||||||||||||||  ||||||||||||||    
T  1612754 actgccgagggaaatgtttcatacgatgaaacagctacctgctccccctacacactattt--ttcatcaccttcat 1612681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 18606005 - 18606097
Alignment:
Q  268 aggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    |||||| | ||||| ||||||||||| |||| ||||||||  ||||||||||| ||||||||| |  |||||||||||  ||||| ||||||||    
T  18606005 aggctgaggcacacgagtaaaatacgtttttgccccctcggtagttaactgcctaggaatttg-acaccggctgcagttaactgccgaggaaaa 18606097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 18606110 - 18606183
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttc 421  Q
    ||||| ||| || |||||| ||| |||||||||  ||| ||||||||||||||||||||||| |||||| ||||    
T  18606110 actgccgagaaatatattttatcagatgaaacagtcacctgctccccctacacactattttcatcatcaacttc 18606183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 13401443 - 13401543
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatat 364  Q
    |||||| || || |||| ||| ||||| | |||| |||||||| ||||||||||||||||||||  ||   ||||||||||  |||||| ||||||||||    
T  13401443 ataaggttgagtaacacgagttaaatatgcttttgccccctcggcagttaactgccgaggaattaaaaaatcggctgcagttaactgctaaggaaaatat 13401542  T
Q  365 t 365  Q
    |    
T  13401543 t 13401543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 345
Target Start/End: Original strand, 31146374 - 31146410
Alignment:
Q  309 cagttaactgccgaggaatttgaattccggctgcagt 345  Q
    |||||||||||||||||||||||| ||||||||||||    
T  31146374 cagttaactgccgaggaatttgaaatccggctgcagt 31146410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 12784073 - 12784010
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatt 328  Q
    ||||||||| | ||||| ||||||||||| |||| |||| ||| |||||||||||||| |||||    
T  12784073 ataaggctgaggcacacaagtaaaatacgcttttgccccatcggcagttaactgccgatgaatt 12784010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 29076462 - 29076343
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||| |   ||||||||||| ||||| |||||   ||| |||| |||| ||| |||||||||| ||| |  || ||| ||||||||    
T  29076462 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29076363  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||||||||||||    
T  29076362 cagttaactgctgaggaaaa 29076343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 29109995 - 29109876
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||| |   ||||||||||| ||||| |||||   ||| |||| |||| ||| |||||||||| ||| |  || ||| ||||||||    
T  29109995 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29109896  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||||||||||||    
T  29109895 cagttaactgctgaggaaaa 29109876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 29111435 - 29111316
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| |||||| |   ||||||||||| ||||| |||||   ||| |||| |||| ||| |||||||||| ||| |  || ||| ||||||||    
T  29111435 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29111336  T
Q  342 cagtatactgctgaggaaaa 361  Q
    ||||  ||||||||||||||    
T  29111335 cagttaactgctgaggaaaa 29111316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 31146439 - 31146498
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattt 407  Q
    ||||| |||||| || ||||||| ||||||||| |||  |||||||||||||||||||||    
T  31146439 actgccgaggaatatgtttcatctgatgaaacagccatctgctccccctacacactattt 31146498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 26702775 - 26702730
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgaca 310  Q
    ||||||||||||||||| ||||||||||| ||||| ||| ||||||    
T  26702775 ataaggctgtgtcacacgagtaaaatacgcttttatcccatcgaca 26702730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 2050998 - 2051081
Alignment:
Q  277 cacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||| ||||||||||| |||| | || ||| |||||||||||||| |||||||||  |||| ||||||  ||||| ||||||||    
T  2050998 cacacgagtaaaatacgtttttgctccttcggcagttaactgccgatgaatttgaa-accggttgcagttaactgccgaggaaaa 2051081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 422
Target Start/End: Complemental strand, 7363318 - 7363250
Alignment:
Q  354 gaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    |||||| || ||||||| |||||||||  ||  ||||||||||||| ||||||||| |||||| |||||    
T  7363318 gaggaatatgtttcatcagatgaaacagtcatctgctccccctacatactattttcatcatcaacttca 7363250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 23958839 - 23958927
Alignment:
Q  257 cacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||| ||||||||||| | ||| | | ||||||||| ||||  ||||||| ||||||||||||||| ||||  ||  |||||||||||    
T  23958839 cacatatgataaggctgagacacccaactaaaatacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccggctgcagt 23958927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 4539 - 4436
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctg 341  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  4539 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttactccctcggcagttaactgccgaggaatttgaactccggctg 4440  T
Q  342 cagt 345  Q
    ||||    
T  4439 cagt 4436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 4397 - 4333
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| ||||||||||||| ||||||||||| |||| ||||||    
T  4397 aaatgtttcatcagatgaaacaaccacctgctccccctacaaactattttcttgatcaacttcat 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 764 - 884
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    ||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||    
T  764 agagaattgctgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgcctaggaatttgaaattcggct 863  T
Q  341 gcagtatactgctgaggaaaa 361  Q
    | |||  ||||| ||||||||    
T  864 gtagttaactgccgaggaaaa 884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 933 - 997
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  933 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcat 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 423
Target Start/End: Original strand, 11770 - 11893
Alignment:
Q  298 taccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttcatccgatgaaacatccacatgctcccccta 397  Q
    ||||| |||| ||||||||| |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||| | || |||||||||||    
T  11770 taccctctcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaatgtttcatccgatgaaacagctacctgctcccccta 11869  T
Q  398 cacactattttcttcatcaccttcat 423  Q
    ||||||||||  ||||||||||||||    
T  11870 cacactattt--ttcatcaccttcat 11893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 3665 - 3580
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaa 326  Q
    |||||||||||| ||||||||  |||||||  ||| |||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  3665 agagaattgttgttcccacattcgataaggtagtggcacactagtaaaatacgatttttccccctaggcagttaactgccgaggaa 3580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 768 - 872
Alignment:
Q  254 tcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgct 353  Q
    |||||||| |||||||| |||| ||||| |||||  |||| |||| |||| |||  | ||||||||||| ||||| ||| ||||||||||||  |||||     
T  768 tcccacatttgataaggttgtggcacacgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaactgcc 867  T
Q  354 gagga 358  Q
    |||||    
T  868 gagga 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 241 - 345
Target Start/End: Original strand, 17964 - 18068
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    ||||||||| || |||||||| |||||| | |||| ||||| |||||  |||| |||| ||||||||||||||||||||||||||||| |||  ||||||    
T  17964 agagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgccccctcgacagttaactgccgaggaattagaaacccggct 18063  T
Q  341 gcagt 345  Q
    |||||    
T  18064 gcagt 18068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 241 - 345
Target Start/End: Complemental strand, 54880 - 54776
Alignment:
Q  241 agagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggct 340  Q
    ||||||||| || |||||||| |||||| | |||| ||||| |||||  |||| |||| ||||||||||||||||||||||||||||| |||  ||||||    
T  54880 agagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgccccctcgacagttaactgccgaggaattagaaacccggct 54781  T
Q  341 gcagt 345  Q
    |||||    
T  54780 gcagt 54776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 50113 - 50188
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    ||||| ||||||||| ||||||  ||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  50113 actgccgaggaaaatgtttcatttgatgaaacagctacctgctccccctacacactattttcttcatcaccttcat 50188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 422
Target Start/End: Original strand, 15664 - 15817
Alignment:
Q  269 ggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaatatttca 368  Q
    ||||||| ||||| |||||  |||| |||| || | | |||||||||||| |||||||||  ||  |||| ||||||  ||||| |||||| || |||||    
T  15664 ggctgtggcacacgagtaatttacgtttttgcctcattgacagttaactgtcgaggaattcaaaaaccggttgcagttaactgccgaggaatatgtttca 15763  T
Q  369 tccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    || |||||||||  ||| ||||||||||||| ||||||||| |||||| |||||    
T  15764 tcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttca 15817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 22360 - 22457
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaat 362  Q
    |||||| |||||||||| ||||   |||  |||| |||||||| |||||||||||||||||||||||| | ||||||||||  |||||||||||||||    
T  22360 ataaggttgtgtcacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgctgaggaaaat 22457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 5337 - 5411
Alignment:
Q  348 actgctgaggaaaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttca 422  Q
    ||||| ||||||||| ||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| |||||    
T  5337 actgccgaggaaaatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttca 5411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 232479 - 232600
Alignment:
Q  239 gaagagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccgg 338  Q
    ||||||||||| |  ||||||||  ||||||| || |  | |||||||||||||||||||| ||||||| |||||||||| |||||||||  || ||||     
T  232479 gaagagaattgctattcccacattggataaggttgagaaagactagtaaaatacgattttatcccctcggcagttaactgtcgaggaattaaaaatccga 232578  T
Q  339 ctgcagtatactgctgaggaaa 360  Q
    |||||||  ||||| |||||||    
T  232579 ctgcagttaactgccgaggaaa 232600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 232961 - 232897
Alignment:
Q  242 gagaattgttgctcccacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctc 306  Q
    ||||||||||| |||||||| |||||| |||| |  |||||||||||||||||||||||||||||    
T  232961 gagaattgttgttcccacatttgataaagctgagaaacactagtaaaatacgattttaccccctc 232897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 420 - 356
Alignment:
Q  359 aaatatttcatccgatgaaacatccacatgctccccctacacactattttcttcatcaccttcat 423  Q
    |||| ||||||| ||||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  420 aaatgtttcatcagatgaaacagctacttgctccccctacacactattttcttcatcaacttcat 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 558 - 470
Alignment:
Q  257 cacatgtgataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagt 345  Q
    ||||| ||||||| ||| |  |||| |||||||||||||||| | |||||| |||||||||||||| |||||   | ||||||||||||    
T  558 cacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagttaactgccgaagaattaataatccggctgcagt 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 1296 - 1229
Alignment:
Q  265 ataaggctgtgtcacactagtaaaatacgattttaccccctcgacagttaactgccgaggaatttgaa 332  Q
    ||||||||| | ||||| |||||  |||| ||||  ||||||| ||||||||||||||||||||||||    
T  1296 ataaggctgaggcacacgagtaatttacgtttttgtcccctcggcagttaactgccgaggaatttgaa 1229  T

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Target: scaffold0513 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 8194 - 8252
Alignment:
Q  303 cctcgacagttaactgccgaggaatttgaattccggctgcagtatactgctgaggaaaa 361  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||  |||||||| |||||    
T  8194 cctcggcagttaactgccaaggaatttgaaatccggatgcagttaactgctgaagaaaa 8252  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 852 - 800
Alignment:
Q  364 tttcatccgatgaaacatccacatgctccccctacacactattttcttcatca 416  Q
    ||||||| |||||||||  | | ||||||||||||||||||||||| ||||||    
T  852 tttcatcagatgaaacagtcccctgctccccctacacactattttcatcatca 800  T

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