View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6140_high_9 (Length: 293)
Name: NF6140_high_9
Description: NF6140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6140_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 28088026 - 28088217
Alignment:
| Q |
20 |
tggggtactgagatagcttagtctaagtatggtccagtaatttcacaaagcaaatatgttatatgtgttttttaagagactggactattgaataccaaac |
119 |
Q |
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| T |
28088026 |
tggggtactgagatagcttagtctaagtatggtctagtaatttcacaaagcaaatatgttatatatgtttttgaagagactggactattgaataccaaac |
28088125 |
T |
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| Q |
120 |
taatacaattctactaattccaattaaacaagaaattaatcatgaagcaaaaataaatcacaaaactaatccatgtattttaacgaagtctt |
211 |
Q |
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| T |
28088126 |
taatacaattctactaattccaattaaacaagaaattaatcatgaagcaaaaataaatctcaaaactaatccatgtattttaacgaagtctt |
28088217 |
T |
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