View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6140_low_12 (Length: 251)
Name: NF6140_low_12
Description: NF6140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6140_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 6273182 - 6272945
Alignment:
| Q |
3 |
tcgactataaattatgttatatagttaatataatttagatatgtgattaatcatgtttattaaatgattaatgagtatgataaggtgtaccaaatcagtt |
102 |
Q |
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| T |
6273182 |
tcgactataaattatgttatatagttaatataatttagatatgtgattaatcatgtttattaaatgattaatgagtatgataaggtgtaccaaatcagtt |
6273083 |
T |
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| Q |
103 |
attaatcacatataaagattaaacgtaatataagcaaattaaaaatttagaacnnnnnnnnatatatgttttaataacttagaacttctaattcaataat |
202 |
Q |
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| T |
6273082 |
attaatcacatataaagattaaacgtaatataagcaaattaaaaatttagaacttttttttatatatgttttaataacttagaacttctaattcaataat |
6272983 |
T |
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| Q |
203 |
taaatatataaaatttagaatcatgtagtatgtttcat |
240 |
Q |
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| T |
6272982 |
taaatatataaaatttagaatcatgtagtatgtttcat |
6272945 |
T |
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