View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6140_low_7 (Length: 354)
Name: NF6140_low_7
Description: NF6140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6140_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 5 - 341
Target Start/End: Original strand, 14736129 - 14736465
Alignment:
| Q |
5 |
tgtcgcatatattgtgatgagtagagagaagtatagttaacgggaccatcaaccgggttattgggagatcgtatgcgatattaagagacttaatgaaggt |
104 |
Q |
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| T |
14736129 |
tgtcgcatatattgggatgagtagagagaagtatagttaacgggaccatcaaccgggttattgggagatcgtatgcgatattcagagacttaatgaaggt |
14736228 |
T |
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| Q |
105 |
attcaagtgttagtgacctaagacagagttgtacaaataagtggattaaggaacttactaacaaatgccaaatgtattggcgtgtttggttttgtttttc |
204 |
Q |
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| T |
14736229 |
attcaagtgttagtgacctaagacagagttgtacaaataagtggattaaggaacttactaacaaatgtcagatgtattggcgtgtttggttttgtttttc |
14736328 |
T |
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| Q |
205 |
tccatctccgaggtgtatgagccaccacataaatcataaccaaggaaatgtgttatggaaattattcagcttgaggaattgaagattttctgattttgga |
304 |
Q |
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| T |
14736329 |
tctatctccgaggtgtatgagccaccacacaaatcataaccaagaaaatgtgttatggaaattattcagcttgaggaattgaagattttctgattttgga |
14736428 |
T |
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| Q |
305 |
aaagcacccatttatctatcaacccaagttagatatt |
341 |
Q |
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| T |
14736429 |
aaagcactcatttatctatcaacccaagttagatatt |
14736465 |
T |
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