View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6143_high_2 (Length: 367)
Name: NF6143_high_2
Description: NF6143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6143_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 48650834 - 48651187
Alignment:
| Q |
1 |
tatttttacaagaataatgttcgaacttttgtatgttaccttgaagttttgtttattgattttatgtatgtattttaaagtgacagtttgtctttgtggg |
100 |
Q |
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| T |
48650834 |
tatttttacaagaaacatgtccgaacttttgtatgtaaccttgaagatttgtttattgattttatgtatgtattttaaagtgacagtttgtctttgtggg |
48650933 |
T |
|
| Q |
101 |
tgtggaatattgataggtacagttagcacgggtgaatgcttcaaaagggtagtggtctgagtcagagtcaaagtcagagtcaaaggagagggacgtgatc |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
48650934 |
tgtggaatattgataggtacagttggcacgggtgaatgcttcaaaagggtagtggtctgagtcagagtc------agagtcaaaggagagggacgtgatc |
48651027 |
T |
|
| Q |
201 |
gtgaatgcacgcagctacattattatttcatctgttctgcatctgcattcggattctttattatgtatttttaatcctaggtgtttcatttcattcatca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
48651028 |
gtgaatgcacgcagctacattattatttcatctgttctgcatctgcattcggattctttattat-tatttttaatcctaggtgtttcatttcattcatca |
48651126 |
T |
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| Q |
301 |
gattctttctttcattatctctc-taacttctcagcgtgagctgtgaattgtttcatttca |
360 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
48651127 |
tattctttctttcattatctctcttaacttctcagcgtgagctgtgaattgtttcatttca |
48651187 |
T |
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