View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6144_low_5 (Length: 311)

Name: NF6144_low_5
Description: NF6144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6144_low_5
NF6144_low_5
[»] chr6 (26 HSPs)
chr6 (1-305)||(19983091-19983396)
chr6 (1-305)||(35014956-35015261)
chr6 (1-305)||(18583468-18583773)
chr6 (1-150)||(26089886-26090035)
chr6 (1-204)||(18002395-18002600)
chr6 (1-156)||(15742169-15742324)
chr6 (1-204)||(23995074-23995279)
chr6 (1-147)||(4991224-4991369)
chr6 (6-156)||(22585495-22585645)
chr6 (6-156)||(22590326-22590476)
chr6 (6-156)||(15889655-15889805)
chr6 (7-156)||(25640505-25640653)
chr6 (6-156)||(15004856-15005005)
chr6 (227-295)||(15079515-15079582)
chr6 (1-112)||(32276756-32276867)
chr6 (6-100)||(17374924-17375018)
chr6 (220-295)||(35135816-35135890)
chr6 (1-63)||(16300022-16300084)
chr6 (265-295)||(16887595-16887625)
chr6 (265-295)||(18570690-18570720)
chr6 (1-63)||(18823429-18823491)
chr6 (1-63)||(19629482-19629544)
chr6 (10-75)||(21931364-21931429)
chr6 (267-308)||(25367027-25367068)
chr6 (267-299)||(21410850-21410882)
chr6 (188-295)||(21623506-21623612)
[»] chr4 (19 HSPs)
chr4 (2-305)||(5682327-5682630)
chr4 (1-305)||(25119006-25119311)
chr4 (1-204)||(14951913-14952117)
chr4 (1-204)||(15272211-15272416)
chr4 (172-305)||(54118067-54118200)
chr4 (5-156)||(19559514-19559665)
chr4 (5-156)||(49071842-49071993)
chr4 (6-128)||(34177617-34177739)
chr4 (103-204)||(15135907-15136010)
chr4 (1-113)||(14500208-14500320)
chr4 (14-84)||(21417471-21417541)
chr4 (269-305)||(18293323-18293359)
chr4 (1-113)||(32460699-32460811)
chr4 (20-63)||(12133643-12133686)
chr4 (220-295)||(27961340-27961414)
chr4 (1-63)||(16522970-16523032)
chr4 (265-295)||(40885368-40885398)
chr4 (265-295)||(52265312-52265342)
chr4 (277-305)||(122300-122328)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-305)||(31079-31384)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-305)||(41460-41765)
[»] chr7 (28 HSPs)
chr7 (1-305)||(126566-126871)
chr7 (1-305)||(32493842-32494150)
chr7 (1-305)||(111068-111373)
chr7 (10-305)||(1936816-1937112)
chr7 (1-204)||(2029072-2029276)
chr7 (3-204)||(3049736-3049937)
chr7 (1-204)||(42056188-42056393)
chr7 (1-192)||(2190097-2190290)
chr7 (172-305)||(3060271-3060404)
chr7 (173-305)||(7283855-7283987)
chr7 (71-150)||(15516817-15516896)
chr7 (6-156)||(13352108-13352258)
chr7 (6-156)||(39291458-39291608)
chr7 (6-126)||(15977820-15977940)
chr7 (170-295)||(13377849-13377974)
chr7 (10-150)||(18151259-18151399)
chr7 (188-295)||(17223739-17223846)
chr7 (10-57)||(8563387-8563434)
chr7 (1-63)||(371241-371303)
chr7 (265-295)||(11287828-11287858)
chr7 (265-295)||(16569810-16569840)
chr7 (265-295)||(16595822-16595852)
chr7 (250-295)||(49047479-49047523)
chr7 (277-305)||(3050012-3050040)
chr7 (277-305)||(15516659-15516687)
chr7 (277-305)||(16212177-16212205)
chr7 (277-305)||(17817258-17817286)
chr7 (277-305)||(19049715-19049743)
[»] chr3 (42 HSPs)
chr3 (1-305)||(7854133-7854438)
chr3 (1-305)||(55513021-55513326)
chr3 (1-305)||(2844342-2844647)
chr3 (1-305)||(3992701-3993006)
chr3 (1-305)||(17955776-17956088)
chr3 (1-305)||(45581782-45582089)
chr3 (1-305)||(54037920-54038228)
chr3 (1-305)||(28558322-28558629)
chr3 (1-204)||(30153093-30153297)
chr3 (1-156)||(54685250-54685405)
chr3 (1-204)||(23492524-23492728)
chr3 (1-204)||(38168065-38168269)
chr3 (1-204)||(53771192-53771397)
chr3 (1-156)||(33342032-33342187)
chr3 (1-204)||(16261604-16261809)
chr3 (172-305)||(15857062-15857195)
chr3 (172-305)||(19232089-19232224)
chr3 (5-156)||(18970076-18970227)
chr3 (172-298)||(16743947-16744073)
chr3 (6-128)||(48421733-48421855)
chr3 (6-128)||(15550754-15550876)
chr3 (10-98)||(14177017-14177105)
chr3 (6-150)||(17393590-17393735)
chr3 (1-113)||(19946850-19946962)
chr3 (12-156)||(11402752-11402896)
chr3 (10-100)||(12539066-12539156)
chr3 (170-299)||(38810814-38810943)
chr3 (265-295)||(8632201-8632231)
chr3 (1-63)||(9303141-9303203)
chr3 (265-295)||(14295851-14295881)
chr3 (265-295)||(14301478-14301508)
chr3 (1-63)||(16934015-16934077)
chr3 (265-295)||(50111856-50111886)
chr3 (250-295)||(12487581-12487625)
chr3 (250-295)||(17139907-17139951)
chr3 (277-305)||(2050221-2050249)
chr3 (277-305)||(5240527-5240555)
chr3 (227-295)||(11882023-11882090)
chr3 (277-305)||(12029970-12029998)
chr3 (277-305)||(19260647-19260675)
chr3 (29-100)||(37915290-37915361)
chr3 (277-305)||(38168344-38168372)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-305)||(80015-80320)
[»] chr8 (28 HSPs)
chr8 (1-305)||(274594-274899)
chr8 (1-305)||(640950-641255)
chr8 (1-305)||(826756-827061)
chr8 (1-305)||(24716661-24716966)
chr8 (1-305)||(39115426-39115731)
chr8 (1-204)||(24385652-24385856)
chr8 (1-204)||(41506709-41506913)
chr8 (172-305)||(16404799-16404932)
chr8 (1-114)||(22321437-22321550)
chr8 (6-156)||(17502317-17502467)
chr8 (6-156)||(21259440-21259590)
chr8 (6-156)||(4234011-4234161)
chr8 (6-156)||(23218033-23218183)
chr8 (170-305)||(31194117-31194251)
chr8 (1-63)||(16038923-16038985)
chr8 (261-305)||(29760363-29760407)
chr8 (10-127)||(18118259-18118376)
chr8 (1-113)||(21494452-21494564)
chr8 (220-303)||(38534019-38534101)
chr8 (1-63)||(3431322-3431384)
chr8 (1-63)||(18612558-18612620)
chr8 (1-63)||(18619463-18619525)
chr8 (170-295)||(21197956-21198080)
chr8 (1-63)||(22147590-22147652)
chr8 (1-63)||(22886478-22886540)
chr8 (250-295)||(21259301-21259345)
chr8 (250-295)||(39446570-39446614)
chr8 (277-305)||(24928614-24928642)
[»] chr1 (16 HSPs)
chr1 (1-305)||(21860162-21860467)
chr1 (1-305)||(44034770-44035075)
chr1 (1-203)||(15861327-15861530)
chr1 (112-305)||(41218667-41218861)
chr1 (1-128)||(22367169-22367296)
chr1 (172-298)||(41394527-41394653)
chr1 (188-295)||(20177513-20177620)
chr1 (174-293)||(27675120-27675238)
chr1 (267-299)||(36356092-36356124)
chr1 (267-299)||(38033472-38033504)
chr1 (265-295)||(9783870-9783900)
chr1 (1-63)||(20254465-20254527)
chr1 (1-63)||(21650081-21650143)
chr1 (265-295)||(35522157-35522187)
chr1 (277-305)||(20913441-20913469)
chr1 (277-305)||(20931756-20931784)
[»] scaffold0016 (3 HSPs)
scaffold0016 (5-305)||(166063-166364)
scaffold0016 (5-246)||(162036-162278)
scaffold0016 (170-295)||(116361-116485)
[»] chr2 (22 HSPs)
chr2 (1-302)||(22274873-22275178)
chr2 (1-302)||(22284106-22284411)
chr2 (1-204)||(9652796-9653000)
chr2 (1-150)||(21274004-21274153)
chr2 (172-305)||(19794528-19794661)
chr2 (1-256)||(15633365-15633621)
chr2 (172-305)||(20627137-20627270)
chr2 (1-150)||(25213200-25213348)
chr2 (172-305)||(43642778-43642913)
chr2 (6-128)||(7321673-7321795)
chr2 (10-127)||(20279571-20279688)
chr2 (267-299)||(3046-3078)
chr2 (1-113)||(28031230-28031342)
chr2 (220-295)||(19668913-19668987)
chr2 (265-296)||(27262217-27262248)
chr2 (1-63)||(24826760-24826822)
chr2 (265-295)||(28974461-28974491)
chr2 (1-63)||(33128196-33128258)
chr2 (250-295)||(7321918-7321962)
chr2 (267-308)||(22762984-22763025)
chr2 (267-308)||(24087245-24087286)
chr2 (188-295)||(25305769-25305876)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-305)||(30245-30550)
[»] scaffold0686 (2 HSPs)
scaffold0686 (1-262)||(5925-6187)
scaffold0686 (59-305)||(5676-5923)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-258)||(298-555)
[»] scaffold0132 (1 HSPs)
scaffold0132 (71-305)||(42575-42807)
[»] chr5 (14 HSPs)
chr5 (1-203)||(11342836-11343039)
chr5 (1-204)||(2031961-2032165)
chr5 (1-156)||(21205077-21205232)
chr5 (1-156)||(21650846-21651001)
chr5 (1-150)||(16105795-16105943)
chr5 (173-305)||(11584374-11584506)
chr5 (6-127)||(22662653-22662774)
chr5 (5-128)||(25004971-25005094)
chr5 (170-295)||(5450645-5450770)
chr5 (222-308)||(7728792-7728877)
chr5 (220-295)||(23494288-23494365)
chr5 (1-63)||(9730424-9730486)
chr5 (1-63)||(17909657-17909719)
chr5 (265-295)||(19405952-19405982)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-204)||(878-1082)
[»] scaffold0032 (3 HSPs)
scaffold0032 (1-204)||(55732-55936)
scaffold0032 (102-150)||(108131-108179)
scaffold0032 (223-294)||(93656-93726)
[»] scaffold0465 (1 HSPs)
scaffold0465 (1-204)||(9882-10087)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-204)||(6443-6647)
[»] scaffold0251 (2 HSPs)
scaffold0251 (1-204)||(13285-13490)
scaffold0251 (1-33)||(21432-21464)
[»] scaffold0303 (2 HSPs)
scaffold0303 (1-150)||(4402-4551)
scaffold0303 (1-128)||(5-132)
[»] scaffold0234 (1 HSPs)
scaffold0234 (1-156)||(17353-17508)
[»] scaffold0039 (2 HSPs)
scaffold0039 (1-204)||(12418-12624)
scaffold0039 (277-305)||(12316-12344)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-137)||(15100-15236)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-205)||(193396-193592)
scaffold0004 (1-65)||(186566-186630)
scaffold0004 (277-305)||(193295-193323)
[»] scaffold1164 (1 HSPs)
scaffold1164 (173-305)||(1701-1833)
[»] scaffold0077 (2 HSPs)
scaffold0077 (173-305)||(15266-15398)
scaffold0077 (277-305)||(36732-36760)
[»] scaffold0122 (2 HSPs)
scaffold0122 (173-305)||(19749-19881)
scaffold0122 (173-305)||(24053-24185)
[»] scaffold0876 (1 HSPs)
scaffold0876 (173-305)||(94-226)
[»] scaffold0049 (1 HSPs)
scaffold0049 (173-305)||(20493-20625)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-150)||(130708-130856)
[»] scaffold0310 (1 HSPs)
scaffold0310 (173-305)||(6203-6335)
[»] scaffold0063 (1 HSPs)
scaffold0063 (5-148)||(44071-44214)
[»] scaffold1295 (1 HSPs)
scaffold1295 (6-295)||(262-548)
[»] scaffold0507 (1 HSPs)
scaffold0507 (6-128)||(1478-1600)
[»] scaffold0079 (1 HSPs)
scaffold0079 (10-156)||(3786-3936)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-63)||(95130-95192)
[»] scaffold0057 (1 HSPs)
scaffold0057 (10-100)||(6043-6133)
[»] scaffold0574 (1 HSPs)
scaffold0574 (1-47)||(9565-9611)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-113)||(17850-17962)
[»] scaffold0150 (1 HSPs)
scaffold0150 (267-305)||(28952-28990)
[»] scaffold0123 (2 HSPs)
scaffold0123 (227-295)||(11252-11319)
scaffold0123 (227-295)||(8386-8453)
[»] scaffold0013 (2 HSPs)
scaffold0013 (188-295)||(35816-35923)
scaffold0013 (10-63)||(7112-7165)
[»] scaffold0396 (1 HSPs)
scaffold0396 (265-296)||(11511-11542)
[»] scaffold0338 (1 HSPs)
scaffold0338 (265-296)||(9400-9431)
[»] scaffold0106 (1 HSPs)
scaffold0106 (266-305)||(42127-42166)
[»] scaffold0022 (1 HSPs)
scaffold0022 (265-296)||(112350-112381)
[»] scaffold0018 (1 HSPs)
scaffold0018 (266-305)||(51008-51047)
[»] scaffold0615 (1 HSPs)
scaffold0615 (1-63)||(6257-6319)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-63)||(17355-17417)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-63)||(5622-5684)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-63)||(61268-61330)
scaffold0023 (277-305)||(49009-49037)
[»] scaffold0021 (1 HSPs)
scaffold0021 (265-295)||(12102-12132)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-63)||(165007-165069)
[»] scaffold0554 (1 HSPs)
scaffold0554 (265-294)||(2328-2357)
[»] scaffold0095 (1 HSPs)
scaffold0095 (250-295)||(33532-33576)
[»] scaffold0302 (1 HSPs)
scaffold0302 (277-305)||(12525-12553)
[»] scaffold0266 (1 HSPs)
scaffold0266 (277-305)||(1536-1564)
[»] scaffold0025 (2 HSPs)
scaffold0025 (277-305)||(147012-147040)
scaffold0025 (277-305)||(149063-149091)
[»] scaffold0009 (1 HSPs)
scaffold0009 (277-305)||(272436-272464)


Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-141; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 19983396 - 19983091
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  19983396 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 19983297  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  19983296 agattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 19983197  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983196 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 19983097  T
Q  300 ttctct 305  Q
    ||||||    
T  19983096 ttctct 19983091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 35015261 - 35014956
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  35015261 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 35015162  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  35015161 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 35015062  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35015061 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctccaacccttgttc 35014962  T
Q  300 ttctct 305  Q
    ||||||    
T  35014961 ttctct 35014956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 18583468 - 18583773
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||||    
T  18583468 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaa 18583567  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||        ||||||||||||||||||| ||||||||| || |||    
T  18583568 agattgggttcatgataatcacttattcccataatcaatgatgcatagaacaggagaaaaagaattaactaaatgattatgatgaaaactaaccccctta 18583667  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18583668 ccttaattatcaccaactattaactcaagcttcacttttgctcctatgattcttcaaactcttgaattcttcaagttcctcttctctccaacccttgttc 18583767  T
Q  300 ttctct 305  Q
    ||||||    
T  18583768 ttctct 18583773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26089886 - 26090035
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  26089886 ttttcatacattatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 26089985  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26089986 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 26090035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 18002600 - 18002395
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||    
T  18002600 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaa 18002501  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||        ||||| |||||||||||||||| |||||| || ||    
T  18002500 agattgggttcatgataatcacttatgcccataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 18002401  T
Q  199 acctta 204  Q
    ||||||    
T  18002400 acctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15742324 - 15742169
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaa-catcaaattaacatattaaaatatatctctacaacataggcacgaatttca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||||||| ||||||||||||    
T  15742324 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaatcatcaaattaacataatcaaacatatctctacaacataagcacgaatttca 15742225  T
Q  100 aagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15742224 aagattgggttcatgataatcacttattctcataatcaattatgcat-gaacaagag 15742169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 23995074 - 23995279
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| |||    
T  23995074 ttttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaattccaa 23995173  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| |||||| || ||    
T  23995174 atattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 23995273  T
Q  199 acctta 204  Q
    ||||||    
T  23995274 acctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4991224 - 4991369
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| |   |||||||||||||| |||||||||||||||||| |||||||  ||| |||||||||||||||| |||||||||||||    
T  4991224 ttttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaaat-aacatatccaaacatatctctacaacataagcacgaatttcaa 4991322  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcata 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4991323 agattgggttcatgataatcacttattctcataatcaattatgcata 4991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 22585645 - 22585495
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||| |||||||||  ||||||||||||||||||    
T  22585645 atacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagatt 22585546  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  22585545 gggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagag 22585495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 22590476 - 22590326
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||| |||||||||  ||||||||||||||||||    
T  22590476 atacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagatt 22590377  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  22590376 gggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagag 22590326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 15889805 - 15889655
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||| ||    
T  15889805 atacatcatgaacatgcaatttcatcatcaacaaatcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggtt 15889706  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  |||||||| |||||  |||| || |||||||||||| |||||    
T  15889705 gggttcacaataatcacgtattcaaataaacacttatgcatagaaaaagag 15889655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 25640653 - 25640505
Alignment:
Q  7 tacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattg 106  Q
    |||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||  |||    
T  25640653 tacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatc-ctacaacatgagcacgaatttcaaaagttg 25640555  T
Q  107 ggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  25640554 ggttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 25640505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 15005005 - 15004856
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||| ||| ||||||||| |||||||||||||| | |||||||||||| |||| | ||| ||||| |||||||||  ||||||||||||||||||    
T  15005005 atacatcataaacatgcaatttcctcatcaacaattcaatcaacatcaaatta-catactcaaacatatcactacaacatgagcacgaatttcaaagatt 15004907  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  |||||| |||||||  |||| || |||||||||||| |||||    
T  15004906 gggttcacaataatctcttattcaaataagcacttatgcatagaaaaagag 15004856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 15079582 - 15079515
Alignment:
Q  227 agcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||    ||||| || |||||| ||||||||||||||||||||||||||||||    
T  15079582 agcttcacttttgctcctagctctcttccaatccttga-ttcttcaagttcctcttctctctaaccctt 15079515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 32276867 - 32276756
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| | |||  |||| | | ||||   ||||||| |||||    
T  32276867 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaattcaa 32276768  T
Q  101 agattgggttca 112  Q
    ||||||||||||    
T  32276767 agattgggttca 32276756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 17375018 - 17374924
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacatag-gcacgaatttcaa 100  Q
    ||||| ||||||| || |||||||||||||| |||||| ||| || ||||||| |||| | ||| ||||| ||||||| ||| |||||||||||||    
T  17375018 atacaccatgaacatgtaatttcatcatcaataattcaattatcaacaaattagcatactcaaacatatcactacaac-tagagcacgaatttcaa 17374924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 35135890 - 35135816
Alignment:
Q  220 tagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    |||||| ||||||||||| |||||||    ||||| || |||||||| |||||||||||||| |||||||||||||    
T  35135890 tagctcaagcttcactttagctcctagctctcttccaatccttgaat-cttcaagttcctctcctctctaaccctt 35135816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16300084 - 16300022
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  16300084 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 16300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 16887625 - 16887595
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  16887625 attcttcaagttcctcttctctctaaccctt 16887595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 18570690 - 18570720
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  18570690 attcttcaagttcctcttctctctaaccctt 18570720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18823491 - 18823429
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  18823491 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 18823429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19629482 - 19629544
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  19629482 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 19629544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 21931364 - 21931429
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatc 75  Q
    ||||||||| ||||||||||||| |||||||||| ||| |||||| || | ||||| ||| |||||    
T  21931364 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaatttcatatattcaaacatatc 21931429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 25367068 - 25367027
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttcttctctctc 308  Q
    |||||||||||||||||||||||||| || ||||||| ||||    
T  25367068 tcttcaagttcctcttctctctaaccatttttcttctttctc 25367027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 21410882 - 21410850
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||||| |||||||||||||||||||    
T  21410882 tcttcaagttccttttctctctaacccttgttc 21410850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 21623506 - 21623612
Alignment:
Q  188 ctaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattcttcaagttcctcttctct 286  Q
    ||||| || |||||||||||||| |||| |  |||| | ||||||||||| ||||||| ||| ||||| ||  |||||| |||||||| || ||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcctaggatctcttc-aattcttgaa-tcttcaagctcttcttctct 21623603  T
Q  287 ctaaccctt 295  Q
    |||||||||    
T  21623604 ctaaccctt 21623612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 2 - 305
Target Start/End: Complemental strand, 5682630 - 5682327
Alignment:
Q  2 tttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||    
T  5682630 tttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaa 5682531  T
Q  102 gattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnnttaactaaatgattatgataaaaactaactcctttacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||| |  |||||    
T  5682530 gattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaggaaaaaattaactaaatgattatgataaaaactaacccacttacc 5682431  T
Q  202 ttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttctt 301  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682430 ttaattatcaccaactattagctcatgcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttctt 5682331  T
Q  302 ctct 305  Q
    ||||    
T  5682330 ctct 5682327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 25119311 - 25119006
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||  |    
T  25119311 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaattttca 25119212  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||| |||    
T  25119211 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaaactaactccctta 25119112  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25119111 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaactcttgttc 25119012  T
Q  300 ttctct 305  Q
    ||||||    
T  25119011 ttctct 25119006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 14951913 - 14952117
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  14951913 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 14952012  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  14952013 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 14952112  T
Q  200 cctta 204  Q
    |||||    
T  14952113 cctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15272416 - 15272211
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  15272416 ttttcatacatcatgaacttgcaatttcatcatcaaccattcgtttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 15272317  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| |||||| || ||    
T  15272316 agattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 15272217  T
Q  199 acctta 204  Q
    ||||||    
T  15272216 acctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 172 - 305
Target Start/End: Complemental strand, 54118200 - 54118067
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    ||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54118200 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattcttcaaacccttgaattcttc 54118101  T
Q  272 aagttcctcttctctctaacccttgttcttctct 305  Q
    ||||| ||||||||||||||||||||| ||||||    
T  54118100 aagtttctcttctctctaacccttgttattctct 54118067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 19559514 - 19559665
Alignment:
Q  5 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagat 104  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  | ||| ||||| |||||||||  ||| ||||||||||  |    
T  19559514 catacatcatgaacatgcaatttcatcatcaacaattcaattaacatcaaattaacatgctcaaacatatcactacaacatgagcaggaatttcaaaagt 19559613  T
Q  105 tgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||| ||| ||||||||||||||  |||| || |||||||||||| |||||    
T  19559614 tgggtacataataatcacttattcaaataagcacttatgcatagaaaaagag 19559665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 49071842 - 49071993
Alignment:
Q  5 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagat 104  Q
    |||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| | ||| ||||| |||||| ||  ||||||||||||| | |    
T  49071842 catatatcatgaacatgcaatttcatcatcaataattcaattaacatcaaattaacatactcaaacatatcactacaatatgagcacgaatttcaacggt 49071941  T
Q  105 tgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||||||  || |||||||||||  |||| || |||||||||||| |||||    
T  49071942 tgggttcacaatgatcacttattcaaataagcacttatgcatagaaaaagag 49071993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 34177739 - 34177617
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||| ||||||||||||||| ||| |||  |||||||||| | ||| ||||| |||||||||  ||||||||||  ||||||    
T  34177739 atacatcatgaacatgcaattttatcatcaacaattcaattatcatgtaattaacatactcaaacatatcactacaacatgagcacgaattttcaagatt 34177640  T
Q  106 gggttcatgataatcacttattc 128  Q
    || ||||  ||||||||||||||    
T  34177639 ggattcacaataatcacttattc 34177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 204
Target Start/End: Complemental strand, 15136010 - 15135907
Alignment:
Q  103 attgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactcctttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| |||||| || ||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  201 ctta 204  Q
    ||||    
T  15135910 ctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 14500320 - 14500208
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| ||  ||||||||| ||| |||||||||| ||| ||||||||||| | |||  |||| | | ||||   ||||||| |||||    
T  14500320 ttttcatacattatgaacatgttatttcatcaccaataattcatttatcattaaattaacatactcaaacttatcaccaaaacaagagcacgaaattcaa 14500221  T
Q  101 agattgggttcat 113  Q
    |||||||||||||    
T  14500220 agattgggttcat 14500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 21417471 - 21417541
Alignment:
Q  14 tgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaaca 84  Q
    ||||| || ||||||||||||||||||||| ||| || |||||| ||||||| ||| ||||||||| ||||    
T  21417471 tgaacatgaaatttcatcatcaacaattcaattatcaacaaattcacatattcaaacatatctctaaaaca 21417541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 18293359 - 18293323
Alignment:
Q  269 ttcaagttcctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||| ||||||    
T  18293359 ttcaagttcctcttctctctaacccttgttattctct 18293323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 32460811 - 32460699
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| | |||  |||  | | ||||   ||||||| |||||    
T  32460811 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaattataaccaaaacaagagcacgaaattcaa 32460712  T
Q  101 agattgggttcat 113  Q
    |||||||||||||    
T  32460711 agattgggttcat 32460699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 12133686 - 12133643
Alignment:
Q  20 tgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||    
T  12133686 tgcaatttcatcattaacaattcaattaacaacaaattaacata 12133643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 27961340 - 27961414
Alignment:
Q  220 tagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    |||||| |||||||||||||||||||    ||||  || |||||||| ||||||||||| ||||||||||||||||    
T  27961340 tagctcaagcttcacttttgctcctagctctctttcaatccttgaat-cttcaagttccccttctctctaaccctt 27961414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16522970 - 16523032
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  16522970 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 16523032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 40885398 - 40885368
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  40885398 attcttcaagttcctcttctctctaaccctt 40885368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 52265342 - 52265312
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  52265342 attcttcaagttcctcttctctctaaccctt 52265312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 122300 - 122328
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  122300 cctcttctctctaacccttgttcttctct 122328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 31384 - 31079
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| |||||||||||||    
T  31384 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaa 31285  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||| || |||    
T  31284 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaaactaaccccctta 31185  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31184 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacacttgttc 31085  T
Q  300 ttctct 305  Q
    ||||||    
T  31084 ttctct 31079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 41460 - 41765
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| |||||||||||||    
T  41460 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaa 41559  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||| || |||    
T  41560 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaaactaaccccctta 41659  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41660 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacacttgttc 41759  T
Q  300 ttctct 305  Q
    ||||||    
T  41760 ttctct 41765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 126566 - 126871
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||    
T  126566 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctgcaacataagcacgaatttcaa 126665  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||| || |||    
T  126666 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaatagaaaaagaattaactaaatgattatgataaaaactaaccccctta 126765  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126766 ccttaattatctccaactattagctctaacttcatttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 126865  T
Q  300 ttctct 305  Q
    ||||||    
T  126866 ttctct 126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 32494150 - 32493842
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||    
T  32494150 ttttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctacaacataaacacgaatttcaa 32494051  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  32494050 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 32493951  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttc---ctcttctctctaacccttg 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||    
T  32493950 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagctctcactcttctctctaacccttg 32493851  T
Q  297 ttcttctct 305  Q
    |||||||||    
T  32493850 ttcttctct 32493842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 111373 - 111068
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  111373 ttttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 111274  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| || |||    
T  111273 atattgggttcatgataatcacttattttcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaaccccctta 111174  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111173 ccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 111074  T
Q  300 ttctct 305  Q
    ||||||    
T  111073 ttctct 111068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 10 - 305
Target Start/End: Complemental strand, 1937112 - 1936816
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggt 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||    
T  1937112 atcatgaacttgcaatttcatcatgaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggt 1937013  T
Q  110 tcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactcctttaccttaatta 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||  | ||||||||||||    
T  1937012 tcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacctccttaccttaatta 1936913  T
Q  209 tctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1936912 tctccaactattaactctagcttcacttttgcttctatgattcttcaaacccttgaattcttcgagttcctcttctctctaacccttgttcttctct 1936816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 2029072 - 2029276
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||    
T  2029072 ttttcgtacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaa 2029171  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  2029172 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaaaattaactaaatgattatgataaagactaaccccctta 2029271  T
Q  200 cctta 204  Q
    |||||    
T  2029272 cctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 3049736 - 3049937
Alignment:
Q  3 ttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaag 102  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| |||  ||||||||||||||    
T  3049736 ttcatacatcatgaacttgcaatttcatcatcc-caattcatttaacatcaaattaacatattcaaacatatctctacaatataaacacgaatttcaaag 3049834  T
Q  103 attgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactcctttacc 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||||    
T  3049835 attgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacc 3049934  T
Q  202 tta 204  Q
    |||    
T  3049935 tta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 42056393 - 42056188
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  42056393 ttttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 42056294  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| |||||| || ||    
T  42056293 agattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 42056194  T
Q  199 acctta 204  Q
    ||||||    
T  42056193 acctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 2190290 - 2190097
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  2190290 ttttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 2190191  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaac 192  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||||||||||    
T  2190190 agattgggtacatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaaaactaac 2190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 3060271 - 3060404
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    |||||||||||||| ||| || || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3060271 atgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctcctacgattcttcaaacccttgaattcttc 3060370  T
Q  272 aagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||||||||||||||||||||||||    
T  3060371 aagttcctcttctctctaacccttgttcttctct 3060404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 173 - 305
Target Start/End: Complemental strand, 7283987 - 7283855
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| ||||||||| || |||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattcttcaaacccttgaattcttca 7283888  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||||||    
T  7283887 agttcctcttctctctaacccttgttcttctct 7283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 15516896 - 15516817
Alignment:
Q  71 atatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15516896 atatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa 15516817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 13352108 - 13352258
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||| ||||||||| |||  || ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||| | ||    
T  13352108 atacatcatgaacatgcaatttcaccatcaacaaatcaaatatcatcaaattaacatactgaaacatatcactacaacatgagcacgaatttcaagggtt 13352207  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  13352208 gggttcacaataatcacttattcaaataaacacttatgcatagaaaaagag 13352258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 39291608 - 39291458
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||  ||    
T  39291608 atacatcatcaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagtt 39291509  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
     ||||||  ||||||||||||||  ||||  | |||||||||||| |||||    
T  39291508 aggttcacaataatcacttattcaaataagtacttatgcatagaaaaagag 39291458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 15977940 - 15977820
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacatag-gcacgaatttcaaagat 104  Q
    ||||| ||||||| ||||||||||||||||| |||||| ||| || |||||||||||| | ||| ||||| ||||||| ||| ||| |||||||||| ||    
T  15977940 atacaccatgaacatgcaatttcatcatcaataattcaattatcaacaaattaacatactcaaacatatcactacaac-tagagcatgaatttcaaacat 15977842  T
Q  105 tgggttcatgataatcacttat 126  Q
    |  |||||| ||||||||||||    
T  15977841 ttagttcataataatcacttat 15977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 13377849 - 13377974
Alignment:
Q  170 aaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattc 268  Q
    ||||||||||||| ||  ||||| || |||||||||||||| |||| |  |||| | ||||||||||| ||||||| ||| ||||| ||  ||| || ||    
T  13377849 aaatgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcctaagatctcttccaattctt-aaatc 13377947  T
Q  269 ttcaagttcctcttctctctaaccctt 295  Q
    |||||| ||||||||||||||||||||    
T  13377948 ttcaagctcctcttctctctaaccctt 13377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 18151399 - 18151259
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggt 109  Q
    ||||||||| | ||| ||| |||||||||||||| ||| || ||||||||||||   ||  ||||| |||||||||  ||||||||||||| | ||  ||    
T  18151399 atcatgaacatacaaattcgtcatcaacaattcaattatcaacaaattaacatacctaatcatatcactacaacatgagcacgaatttcaacggttaagt 18151300  T
Q  110 tcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    |||  ||||||||||||||  ||||  | ||||||||||||    
T  18151299 tcacaataatcacttattcaaataagaatttatgcatagaa 18151259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 17223846 - 17223739
Alignment:
Q  188 ctaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattcttcaagttcctcttctct 286  Q
    ||||| || |||||||||||||| |||| | ||||| | |||||||||||  ||| || ||| ||||| ||  |||||||| ||||||||| ||||||||    
T  17223846 ctaacccccttaccttaattatcaccaattcttagcccaagcttcactttacctcgtaggatctcttccaattcttgaatt-ttcaagttcttcttctct 17223748  T
Q  287 ctaaccctt 295  Q
    |||||||||    
T  17223747 ctaaccctt 17223739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 8563434 - 8563387
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 57  Q
    ||||||||| ||||||||||||| |||||||||| ||| |||||||||    
T  8563434 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaatt 8563387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 371241 - 371303
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  371241 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 11287828 - 11287858
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  11287828 attcttcaagttcctcttctctctaaccctt 11287858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 16569840 - 16569810
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  16569840 attcttcaagttcctcttctctctaaccctt 16569810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 16595822 - 16595852
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  16595822 attcttcaagttcctcttctctctaaccctt 16595852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 49047523 - 49047479
Alignment:
Q  250 tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  49047523 tcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 49047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 3050012 - 3050040
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  3050012 cctcttctctctaacccttgttcttctct 3050040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 15516687 - 15516659
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  15516687 cctcttctctctaacccttgttcttctct 15516659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 16212177 - 16212205
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  16212177 cctcttctctctaacccttgttcttctct 16212205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 17817286 - 17817258
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  17817286 cctcttctctctaacccttgttcttctct 17817258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 19049715 - 19049743
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  19049715 cctcttctctctaacccttgttcttctct 19049743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 7854133 - 7854438
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  7854133 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 7854232  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| || |||    
T  7854233 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaaccccctta 7854332  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7854333 ccttaattatcaccaactattagctcaagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 7854432  T
Q  300 ttctct 305  Q
    ||||||    
T  7854433 ttctct 7854438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 55513021 - 55513326
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||||||||||||    
T  55513021 ttttcatacatcattaacttgcaatttcatcatcaacaattcatttaacatcgaattaacatattcaaacatatctctacaacataagcacgaatttcaa 55513120  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  55513121 agattgggttcatgataatcacttatttccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 55513220  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55513221 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagctcctcttctctctaacccttgttc 55513320  T
Q  300 ttctct 305  Q
    ||||||    
T  55513321 ttctct 55513326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 2844342 - 2844647
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |  ||||||||||| |||||||||||||    
T  2844342 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaaaatctacaacataagcacgaatttcaa 2844441  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnntt-aactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||        | ||||||||||||||||||||||||||| || |||    
T  2844442 agattgggttcatgataatcgcttattcccataatcaattatgcatagaataagagaaaaagaatcaactaaatgattatgataaaaactaaccccctta 2844541  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2844542 ccttaattatctcaaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 2844641  T
Q  300 ttctct 305  Q
    ||||||    
T  2844642 ttctct 2844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 3992701 - 3993006
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||    
T  3992701 ttttcctacatcatgaacctgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacggatttcaa 3992800  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaactccttta 199  Q
    || ||| |||||||||||| ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  3992801 aggttgagttcatgataattacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 3992900  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  3992901 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattctttaagttcctctcctctttaacccttgttc 3993000  T
Q  300 ttctct 305  Q
    ||||||    
T  3993001 ttctct 3993006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 17956088 - 17955776
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||| ||||| |||||||||||||    
T  17956088 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcagacatatctctaccacataagcacgaatttcaa 17955989  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  17955988 agattgggttcatgataatcacttattctcataatcgattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 17955889  T
Q  200 ccttaattatctccaactattagct----ctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagtt---cctcttctctctaacc 292  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||    
T  17955888 ccttaattatctccaactattagctctacctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaaattctccctcttctctctaacc 17955789  T
Q  293 cttgttcttctct 305  Q
    |||||||||||||    
T  17955788 cttgttcttctct 17955776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 45581782 - 45582089
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  45581782 ttttcatacatcatgaacttgcaatttcatcatcaacaattcattaatcatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 45581881  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaa-ctccttt 198  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||| | || ||    
T  45581882 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccctt 45581981  T
Q  199 accttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctct--tctctctaacccttg 296  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  45581982 accttaattatctccaactattagctctagcttca-tttttctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctctaaccattg 45582080  T
Q  297 ttcttctct 305  Q
    |||||||||    
T  45582081 ttcttctct 45582089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 54038228 - 54037920
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||||||| ||||    
T  54038228 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaatataagcacgaatgtcaa 54038129  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  54038128 acattgagttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 54038029  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaag---ttcctcttctctctaacccttg 296  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||    
T  54038028 ccttaattatcaccaactattagctcaagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagctctccctcttctctctaacccttg 54037929  T
Q  297 ttcttctct 305  Q
    |||||||||    
T  54037928 ttcttctct 54037920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 28558322 - 28558629
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||  ||||| |||||||||||||    
T  28558322 ttttcatacatcatgaacttgcaatttcatcatcaacaatttatttatcatcaaattaacatattcaaacatatctctatcacataagcacgaatttcaa 28558421  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||||||| |  |||    
T  28558422 agattaggttcatgataatcacttattctcataatcaattatgcatggaacaagagaaaaagaattaactaaatgattatgataaaaactaaccctctta 28558521  T
Q  200 cctta-------attatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctct--tctctctaa 290  Q
    |||||       ||||   |||||  ||||     |||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  28558522 ccttagataaagattaatcccaac--ttag-----gcttcaattttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctctaa 28558614  T
Q  291 cccttgttcttctct 305  Q
    |||||||||||||||    
T  28558615 cccttgttcttctct 28558629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 30153093 - 30153297
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  30153093 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 30153192  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||||||| || |||    
T  30153193 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaattaaatgattatgataaaaactaaccccctta 30153292  T
Q  200 cctta 204  Q
    |||||    
T  30153293 cctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54685405 - 54685250
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  54685405 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 54685306  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54685305 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 54685250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 23492524 - 23492728
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| ||| |||||||||    
T  23492524 ttttcatacatcatgaacttgcaatttcataatcaacaattcatttaacatcaaattaacacattcaaacatatctctacaacataagcaagaatttcaa 23492623  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  23492624 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 23492723  T
Q  200 cctta 204  Q
    |||||    
T  23492724 cctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 38168065 - 38168269
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| | |||||||||||    
T  38168065 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatttctacaacataagtacgaatttcaa 38168164  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||| |||||||||||||||| |||||| || |||    
T  38168165 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 38168264  T
Q  200 cctta 204  Q
    |||||    
T  38168265 cctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 53771192 - 53771397
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  53771192 ttttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 53771291  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| |||||| || ||    
T  53771292 agattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 53771391  T
Q  199 acctta 204  Q
    ||||||    
T  53771392 acctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 33342032 - 33342187
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||  |||||||||||||    
T  33342032 ttttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatctctaccacattagcacgaatttcaa 33342131  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33342132 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagag 33342187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 16261604 - 16261809
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  16261604 ttttcgtacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 16261703  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||        ||||| |||||||||||||||| |||||| || ||    
T  16261704 agattgggttcatgataatcacttattctcataatcaattacgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 16261803  T
Q  199 acctta 204  Q
    ||||||    
T  16261804 acctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 172 - 305
Target Start/End: Complemental strand, 15857195 - 15857062
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    ||||||||||| || |||||| || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  15857195 atgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatgattcatcaaacccttgaattcttc 15857096  T
Q  272 aagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||||||||||||||||||||||||    
T  15857095 aagttcctcttctctctaacccttgttcttctct 15857062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 19232089 - 19232224
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    ||||||| |||||| |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19232089 atgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattcttcaaacccttgaattcttc 19232188  T
Q  272 aagttcctcttctc--tctaacccttgttcttctct 305  Q
    ||||||||||||||  |||||||| |||||| ||||    
T  19232189 aagttcctcttctctctctaacccctgttctcctct 19232224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 18970076 - 18970227
Alignment:
Q  5 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagat 104  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| | ||| ||||| |||||||||  |||||||||||||||||    
T  18970076 catacatcatgaacatgaaatttcatcatcaacaattcaattaacatcaaattaacatacttaaacatatcactacaacatgagcacgaatttcaaagat 18970175  T
Q  105 tgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||||||| ||||||||||||||  ||||||| |||||||||||| |||||    
T  18970176 tgggttcataataatcacttattcaaataatcacttatgcatagaaaaagag 18970227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 172 - 298
Target Start/End: Complemental strand, 16744073 - 16743947
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    ||||||||| |||| ||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  16744073 atgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctccaaatccttgaattcttc 16743974  T
Q  272 aagttcctcttctctctaacccttgtt 298  Q
    ||| ||||| |||||||||||||||||    
T  16743973 aagctcctcctctctctaacccttgtt 16743947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 48421733 - 48421855
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||| ||||||||||||||    
T  48421733 atacatcatgaacatgcaatttcatcaccaacaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcatgaatttcaaagatt 48421832  T
Q  106 gggttcatgataatcacttattc 128  Q
    |||||||  ||||||||||||||    
T  48421833 gggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15550754 - 15550876
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||  ||    
T  15550754 atacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagtt 15550853  T
Q  106 gggttcatgataatcacttattc 128  Q
    |||||||  ||||||||||||||    
T  15550854 gggttcacaataatcacttattc 15550876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 14177105 - 14177017
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttc 98  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||||| |||||| | ||| ||||| |||||||||  | |||||||||    
T  14177105 atcatgaacatgcaatttcatcatcaacaattcaattatcatcaaatgaacatactgaaacatatcactacaacatgaggacgaatttc 14177017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 17393590 - 17393735
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacatag-gcacgaatttcaaagat 104  Q
    ||||| ||||||| |||||||||||| |||| |||||| ||| || ||||||||||||   ||| ||||| ||||||| ||| |||||||||||||  ||    
T  17393590 atacagcatgaacatgcaatttcatcgtcaataattcaattatcaacaaattaacatacccaaacatatcactacaac-tagagcacgaatttcaacaat 17393688  T
Q  105 tgggttcatgataatcacttattctca--taatcaattatgcatagaa 150  Q
    |  |||||| ||||||||||| |||||  ||| |||||||||||||||    
T  17393689 taagttcataataatcactta-tctcaattaagcaattatgcatagaa 17393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19946850 - 19946962
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| | |||| |||| | | ||||   ||||||| |||||    
T  19946850 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaatttatcaccaaaacaagagcacgaaattcaa 19946949  T
Q  101 agattgggttcat 113  Q
    |||||||||||||    
T  19946950 agattgggttcat 19946962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 11402752 - 11402896
Alignment:
Q  12 catgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggttc 111  Q
    ||||||| || |||||||||| |||||||||| ||| ||||||||| | ||| | ||| ||||| ||| || ||  |||||||||||||  |||  ||||    
T  11402752 catgaacatgaaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcactataatatgagcacgaatttcaacaattaagttc 11402851  T
Q  112 atgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |  ||||||||||||||  |||| || || |||||||||| ||||    
T  11402852 acaataatcacttattcaaataagcacttgtgcatagaactagag 11402896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 12539156 - 12539066
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||| |||||||||||||||||||||||| ||| || |||||| ||||| | ||  ||||| ||| ||||   |||||||||||||    
T  12539156 atcatgaacatgcaatttcatcatcaacaattcaattatcaacaaattcacatactcaaccatatcactaaaacaagagcacgaatttcaa 12539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 38810943 - 38810814
Alignment:
Q  170 aaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattc 268  Q
    ||||||||||||| ||  ||||| || |||||||| ||||| |||| |  |||| | ||||||||||| ||||||| ||| ||||| |   ||||||| |    
T  38810943 aaatgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctcctaggatctcttccagttcttgaat-c 38810845  T
Q  269 ttcaagttcctcttctctctaacccttgttc 299  Q
    |||||| ||||||||| ||||||||||||||    
T  38810844 ttcaagctcctcttctatctaacccttgttc 38810814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 8632201 - 8632231
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  8632201 attcttcaagttcctcttctctctaaccctt 8632231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9303203 - 9303141
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  9303203 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 9303141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 14295851 - 14295881
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  14295851 attcttcaagttcctcttctctctaaccctt 14295881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 14301478 - 14301508
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  14301478 attcttcaagttcctcttctctctaaccctt 14301508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16934077 - 16934015
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  16934077 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 16934015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 50111886 - 50111856
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  50111886 attcttcaagttcctcttctctctaaccctt 50111856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 12487625 - 12487581
Alignment:
Q  250 tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  12487625 tcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 12487581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 17139907 - 17139951
Alignment:
Q  250 tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  17139907 tcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 17139951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 2050221 - 2050249
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  2050221 cctcttctctctaacccttgttcttctct 2050249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 5240555 - 5240527
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  5240555 cctcttctctctaacccttgttcttctct 5240527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 11882090 - 11882023
Alignment:
Q  227 agcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||||||||| ||||||| |||   || ||| ||||||| ||||||| ||||||||||||||||||||    
T  11882090 agcttcactttagctcctaggatctctccaactcttgaat-cttcaagctcctcttctctctaaccctt 11882023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 12029998 - 12029970
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  12029998 cctcttctctctaacccttgttcttctct 12029970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 19260675 - 19260647
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  19260675 cctcttctctctaacccttgttcttctct 19260647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 37915361 - 37915290
Alignment:
Q  29 atcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacatag-gcacgaatttcaa 100  Q
    ||||||||||||||| |||||| ||||||||||||   ||| ||||| ||||||| ||| |||||||||||||    
T  37915361 atcatcaacaattcaattaacaacaaattaacatacccaaacatatcactacaac-tagagcacgaatttcaa 37915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 38168344 - 38168372
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  38168344 cctcttctctctaacccttgttcttctct 38168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 80015 - 80320
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||| |||| ||||||||    
T  80015 ttttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctaccacataagcacaaatttcaa 80114  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  80115 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 80214  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  80215 ccttaattatctccaactattagctcaagcttcacttttgctcctatgattctttaaacccttgaattcttcaagttcctcttctctctaacccttgttc 80314  T
Q  300 ttctct 305  Q
    ||||||    
T  80315 ttctct 80320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 274594 - 274899
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||| |||||||||||||    
T  274594 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaa 274693  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||| || |||    
T  274694 agattgggttcatgataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaaccccctta 274793  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  274794 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacatttgaattcttcaagttcctcttctctctaacccttgttc 274893  T
Q  300 ttctct 305  Q
    ||||||    
T  274894 ttctct 274899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 641255 - 640950
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||| |||||||||||||    
T  641255 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaa 641156  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||| || |||    
T  641155 agattgggttcatgataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaaccccctta 641056  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  641055 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacatttgaattcttcaagttcctcttctctctaacccttgttc 640956  T
Q  300 ttctct 305  Q
    ||||||    
T  640955 ttctct 640950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 827061 - 826756
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||| |||||||||||||    
T  827061 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaa 826962  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||| || |||    
T  826961 agattgggttcatgataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaaccccctta 826862  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  826861 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacatttgaattcttcaagttcctcttctctctaacccttgttc 826762  T
Q  300 ttctct 305  Q
    ||||||    
T  826761 ttctct 826756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 24716966 - 24716661
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| | |||  ||||||||||||    
T  24716966 ttttcatacatcgtgaacttgcaatttcattatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccatataaccacgaatttcaa 24716867  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaactccttta 199  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  24716866 agatcgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 24716767  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24716766 ccttaattatcaccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 24716667  T
Q  300 ttctct 305  Q
    ||||||    
T  24716666 ttctct 24716661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 39115426 - 39115731
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||| ||||    
T  39115426 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctttacaacataagcacgaatgtcaa 39115525  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| || |||    
T  39115526 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaacaccctta 39115625  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||     
T  39115626 ccttaattattaccaactattagctcaagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagtttctcttctctgtaacccttgtta 39115725  T
Q  300 ttctct 305  Q
    ||||||    
T  39115726 ttctct 39115731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 24385856 - 24385652
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||    
T  24385856 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaa 24385757  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  24385756 agattgggttcataataatcacttattctcataatcaattatgcatagaacaagagaaaaggaattaactaaatgattatgataaagactaaccccctta 24385657  T
Q  200 cctta 204  Q
    |||||    
T  24385656 cctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 41506913 - 41506709
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||    
T  41506913 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacggatttcaa 41506814  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| || |||    
T  41506813 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaaccccctta 41506714  T
Q  200 cctta 204  Q
    |||||    
T  41506713 cctta 41506709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 172 - 305
Target Start/End: Complemental strand, 16404932 - 16404799
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    ||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16404932 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 16404833  T
Q  272 aagttcctcttctctctaacccttgttcttctct 305  Q
    |||||||| |||||||||||||||||||| ||||    
T  16404832 aagttcctattctctctaacccttgttctgctct 16404799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22321550 - 22321437
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |  |||||||||||||    
T  22321550 ttttcatacgtcatgaacttgcaatttcatcatcaacaattcaattaacatcaaattaacatattcaaacatatctctacaacctgagcacgaatttcaa 22321451  T
Q  101 agattgggttcatg 114  Q
    ||||||||||||||    
T  22321450 agattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 17502317 - 17502467
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||||||| ||||||||| | | ||||||||||||||| | ||| ||||| |||||||||  |||| |||||||||||||    
T  17502317 atacatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatcactacaacatgagcacaaatttcaaagatt 17502416  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||| ||||||||||||||  |||| || |||||||||||| |||||    
T  17502417 gggttcataataatcacttattcaaataagcacttatgcatagaaaaagag 17502467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 21259590 - 21259440
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||  ||    
T  21259590 atacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagtt 21259491  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  21259490 gggttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 21259440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 4234011 - 4234161
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||| | ||| ||||| || ||||||  |||| |||||||||||||    
T  4234011 atacatcataaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatcactgcaacatgagcacaaatttcaaagatt 4234110  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  4234111 gggttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 4234161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 23218033 - 23218183
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||| | ||| ||||| |||| ||||| ||||||||||||||  ||    
T  23218033 atacatcattaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatcactaccacataagcacgaatttcaaaagtt 23218132  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  23218133 gggttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 23218183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 305
Target Start/End: Complemental strand, 31194251 - 31194117
Alignment:
Q  170 aaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattct 269  Q
    ||||||||||||| ||||||||| || |||||||| |||  |  |   | |||||  ||||||||||||||||||||||||||||||| | ||||| ||     
T  31194251 aaatgattatgatgaaaactaacccccttaccttagttagattaattcactagcttaagcttcacttttgctcctatgattcttcaaatctttgaa-tcc 31194153  T
Q  270 tcaagttcctcttctctctaacccttgttcttctct 305  Q
    |||||||| |||||||||||||||||||| ||||||    
T  31194152 tcaagttcttcttctctctaacccttgtttttctct 31194117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16038985 - 16038923
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  16038985 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacata 16038923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 29760363 - 29760407
Alignment:
Q  261 ttgaattcttcaagttcctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29760363 ttgaattcttcaagttcctcttctctctaacccttgttcttctct 29760407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 18118376 - 18118259
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggt 109  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||   ||| ||||||||| ||||   ||||||||||||| ||||  ||    
T  18118376 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaatttatatacgcaaacatatctctataacacgagcacgaatttcaacgattaagt 18118277  T
Q  110 tcatgataatcacttatt 127  Q
    |||  |||||||||||||    
T  18118276 tcacaataatcacttatt 18118259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21494564 - 21494452
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| | |||  |||| | | ||||   ||||||| |||||    
T  21494564 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaattatcaccaaaacaagagcacgaaattcaa 21494465  T
Q  101 agattgggttcat 113  Q
    |||||||||||||    
T  21494464 agattgggttcat 21494452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 38534019 - 38534101
Alignment:
Q  220 tagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttcttct 303  Q
    |||||||||||||||||| |||||||    ||||| || | |||||| |||||||||| ||||||||||||||||| |||||||    
T  38534019 tagctctagcttcactttagctcctagctctcttccaatctttgaat-cttcaagttcttcttctctctaaccctttttcttct 38534101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3431384 - 3431322
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  3431384 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 3431322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18612558 - 18612620
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  18612558 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 18612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18619463 - 18619525
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  18619463 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 18619525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 21198080 - 21197956
Alignment:
Q  170 aaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct-tcaaacccttgaattc 268  Q
    |||||||||| || ||  ||||| || ||| |||||||||| |||| |  |||| | ||||||||||| ||||||| | |||| || ||| ||||||| |    
T  21198080 aaatgattataatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctcctagg-ttctctccaactcttgaat-c 21197983  T
Q  269 ttcaagttcctcttctctctaaccctt 295  Q
    |||||| ||||||||||||||||||||    
T  21197982 ttcaagctcctcttctctctaaccctt 21197956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 22147590 - 22147652
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  22147590 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 22147652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 22886478 - 22886540
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  22886478 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 22886540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 21259345 - 21259301
Alignment:
Q  250 tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  21259345 tcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 21259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 39446614 - 39446570
Alignment:
Q  250 tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  39446614 tcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 39446570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 24928642 - 24928614
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  24928642 cctcttctctctaacccttgttcttctct 24928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 21860162 - 21860467
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||| | |||||||||||    
T  21860162 ttttcattcatcatgaacttgcaatttcatcattaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagtacgaatttcaa 21860261  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||| || |||    
T  21860262 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaaactaaccccctta 21860361  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21860362 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 21860461  T
Q  300 ttctct 305  Q
    ||||||    
T  21860462 ttctct 21860467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 44035075 - 44034770
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||  || |||||||||    
T  44035075 ttttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatatctacaacataaacaagaatttcaa 44034976  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  44034975 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 44034876  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44034875 ccttaattatctccaactattagctctagcttcacttttgctcctataattcttcaaactcttgaattcttcaagttcctcttctctctaacccttgttc 44034776  T
Q  300 ttctct 305  Q
    ||||||    
T  44034775 ttctct 44034770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15861530 - 15861327
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  15861530 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 15861431  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||| |||||||||||||||| |||||| || |||    
T  15861430 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 15861331  T
Q  200 cctt 203  Q
    ||||    
T  15861330 cctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 112 - 305
Target Start/End: Original strand, 41218667 - 41218861
Alignment:
Q  112 atgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaactcctttaccttaattatc 210  Q
    |||| |||||||||||| |||||||||||||||||||||||||||        ||||||||||||| ||||| ||||||||| || ||||||||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttaccttaattatc 41218766  T
Q  211 tccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttcttctct 305  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41218767 accaactattagctcaagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttcttctct 41218861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 22367169 - 22367296
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  22367169 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 22367268  T
Q  101 agattgggttcatgataatcacttattc 128  Q
    ||||||||||||||||||||||||||||    
T  22367269 agattgggttcatgataatcacttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 172 - 298
Target Start/End: Original strand, 41394527 - 41394653
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  41394527 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctccaaacccttgaattcttc 41394626  T
Q  272 aagttcctcttctctctaacccttgtt 298  Q
    ||| ||||| |||||||||||||||||    
T  41394627 aagctcctcctctctctaacccttgtt 41394653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 20177513 - 20177620
Alignment:
Q  188 ctaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattcttcaagttcctcttctct 286  Q
    ||||| || |||||||||||||| |||| |  |||| | ||||||||||| ||||||| ||| ||||| ||  |||||| |||||||| || ||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctcctaggatctcttccaattcttgaa-tcttcaagctcttcttctct 20177611  T
Q  287 ctaaccctt 295  Q
    |||||||||    
T  20177612 ctaaccctt 20177620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 27675120 - 27675238
Alignment:
Q  174 gattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattcttca 272  Q
    ||||||||||||  ||||| || ||||||||||||||||||| |  |||| | ||||||||||| ||||||| ||| ||||| ||  |||||| ||||||    
T  27675120 gattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcactttagctcctaggatctcttccaa-tcttgaa-tcttca 27675217  T
Q  273 agttcctcttctctctaaccc 293  Q
    || || |||| ||||||||||    
T  27675218 agctcttcttttctctaaccc 27675238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 36356124 - 36356092
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||    
T  36356124 tcttcaagttcctcttctctctaacccttgttc 36356092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 38033504 - 38033472
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||    
T  38033504 tcttcaagttcctcttctctctaacccttgttc 38033472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 9783900 - 9783870
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  9783900 attcttcaagttcctcttctctctaaccctt 9783870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20254465 - 20254527
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  20254465 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 20254527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21650143 - 21650081
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  21650143 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 21650081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 35522187 - 35522157
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  35522187 attcttcaagttcctcttctctctaaccctt 35522157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 20913441 - 20913469
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  20913441 cctcttctctctaacccttgttcttctct 20913469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 20931756 - 20931784
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  20931756 cctcttctctctaacccttgttcttctct 20931784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 229; Significance: 1e-126; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 166364 - 166063
Alignment:
Q  5 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagat 104  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||| | |||||||||||||| |||||||||||||||||    
T  166364 catacatcatgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagat 166265  T
Q  105 tgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactcctttacctt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||| || |||||||    
T  166264 tgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaaaactaacccccttacctt 166165  T
Q  204 aattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttcttct 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  166164 aattatctccaactattagctctagcttcacttttgctcctatgattcttcaaaccattgaattcttcaagttcctcttctctctaacccttgttcttct 166065  T
Q  304 ct 305  Q
    ||    
T  166064 ct 166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 162278 - 162036
Alignment:
Q  5 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagat 104  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||| | |||||||||||||| |||||||||||||||||    
T  162278 catacatcatgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagat 162179  T
Q  105 tgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactcctttacctt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||| || |||||||    
T  162178 tgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaaaactaacccccttacctt 162079  T
Q  204 aattatctccaactattagctctagcttcacttttgctcctat 246  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  162078 aattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 116485 - 116361
Alignment:
Q  170 aaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattct 269  Q
    ||||||||||||| ||| ||||| || |||||||||||||| |||| |  |||| | ||||||||||| ||||||| |||   || ||   ||||| |||    
T  116485 aaatgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcctaggatctctccaattattgaa-tct 116387  T
Q  270 tcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||||||||||||    
T  116386 tcaagctcttcttctctctaaccctt 116361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 22274873 - 22275178
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||    
T  22274873 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaa 22274972  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||  ||||| || |||    
T  22274973 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaggctaaccccctta 22275072  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaag---ttcctcttctctctaacccttg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||    
T  22275073 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagctctccctcttctctctaacccttg 22275172  T
Q  297 ttcttc 302  Q
    ||||||    
T  22275173 ttcttc 22275178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 22284106 - 22284411
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||| |||||||||||||    
T  22284106 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacattaaattaacatattcaaacatatctctaccacataagcacgaatttcaa 22284205  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  22284206 agattgagttcatgataatcacttattctcataatcaaatatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 22284305  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttc---ctcttctctctaacccttg 296  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||    
T  22284306 ccttaattatctccaactattagctctaacttcacttttgctcctatgattcttcaaacccttgaattcttcaagctctctctcttctctctaacccttg 22284405  T
Q  297 ttcttc 302  Q
    ||||||    
T  22284406 ttcttc 22284411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 9653000 - 9652796
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||    
T  9653000 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaa 9652901  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaag-agnnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |        ||||| |||||||||||||||| |||||| || |||    
T  9652900 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaaaaaaagaattaaccaaatgattatgataaagactaaccccctta 9652801  T
Q  200 cctta 204  Q
    |||||    
T  9652800 cctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 21274153 - 21274004
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  21274153 ttttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 21274054  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21274053 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 21274004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 172 - 305
Target Start/End: Complemental strand, 19794661 - 19794528
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    ||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19794661 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattcttcaaacccttgaattcttc 19794562  T
Q  272 aagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||||||||||||||||||||||||    
T  19794561 aagttcctcttctctctaacccttgttcttctct 19794528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 15633365 - 15633621
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| | |||  |||| | | ||||   ||||||| |||||    
T  15633365 ttttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaattcaa 15633464  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaactaaatgattatgataaaaactaactccttta 199  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||||||  | |||    
T  15633465 gaattgggttcattataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaagtgattatgataaagactaacctcctta 15633564  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaa 256  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15633565 ccttaattatctccaactattaactctagcttcacttttgctcctatgattcttcaa 15633621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 172 - 305
Target Start/End: Complemental strand, 20627270 - 20627137
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    |||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20627270 atgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 20627171  T
Q  272 aagttcctcttctctctaacccttgttcttctct 305  Q
    ||| | ||| ||| || |||||||||||||||||    
T  20627170 aagcttctcctctgtccaacccttgttcttctct 20627137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25213200 - 25213348
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| |   |||||||||||||| |||||||||||||||| |||||||||  ||| |||||||||||||||| |||||||||||||    
T  25213200 ttttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacatatccaaacatatctctacaacataagcacgaatttcaa 25213298  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25213299 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 25213348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 172 - 305
Target Start/End: Complemental strand, 43642913 - 43642778
Alignment:
Q  172 atgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 271  Q
    |||||||||||||| ||||||  | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43642913 atgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttc 43642814  T
Q  272 aagttcctct--tctctctaacccttgttcttctct 305  Q
    |||||||| |  |||||||||||||| |||||||||    
T  43642813 aagttcctattctctctctaacccttcttcttctct 43642778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 7321673 - 7321795
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||| ||| || ||||||||||| || |||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||  ||    
T  7321673 atacatcataaacatgaaatttcatcataaaaaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagtt 7321772  T
Q  106 gggttcatgataatcacttattc 128  Q
    |||||||  ||| ||||||||||    
T  7321773 gggttcacaatagtcacttattc 7321795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 20279571 - 20279688
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagattgggt 109  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||   ||| ||||||||| |||||  ||||||||||||| ||||  ||    
T  20279571 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatacccaaacatatctctataacatgagcacgaatttcaacgattaagt 20279670  T
Q  110 tcatgataatcacttatt 127  Q
    |||  |||||||||||||    
T  20279671 tcaccataatcacttatt 20279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 3078 - 3046
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttc 299  Q
    |||||||||||||||||||||||||||||||||    
T  3078 tcttcaagttcctcttctctctaacccttgttc 3046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28031342 - 28031230
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||| |||| |||||| ||  ||||||||| |||||||||||||| ||   |||||||||| |||||  |||| | | ||||   ||||||| |||||    
T  28031342 ttttcacacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacatactaaaacttatcaccaaaacaagagcacgaaattcaa 28031243  T
Q  101 agattgggttcat 113  Q
    |||||||||||||    
T  28031242 agattgggttcat 28031230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 19668987 - 19668913
Alignment:
Q  220 tagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    |||||| ||||||||||| |||||||    ||||  || |||||||| ||||||||||||||||||||||||||||    
T  19668987 tagctcaagcttcactttagctcctagctctctttcaatccttgaat-cttcaagttcctcttctctctaaccctt 19668913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 27262217 - 27262248
Alignment:
Q  265 attcttcaagttcctcttctctctaacccttg 296  Q
    ||||||||||||||||||||||||||||||||    
T  27262217 attcttcaagttcctcttctctctaacccttg 27262248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24826822 - 24826760
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  24826822 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 24826760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 28974461 - 28974491
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  28974461 attcttcaagttcctcttctctctaaccctt 28974491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33128196 - 33128258
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  33128196 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 33128258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 7321918 - 7321962
Alignment:
Q  250 tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  7321918 tcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 7321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 22763025 - 22762984
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttcttctctctc 308  Q
    |||||||| |||||||||||||||||||| ||||||| ||||    
T  22763025 tcttcaagctcctcttctctctaaccctttttcttctttctc 22762984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 24087286 - 24087245
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttcttctctctc 308  Q
    |||||||||||||| |||||||||||||| ||||||| ||||    
T  24087286 tcttcaagttcctcctctctctaaccctttttcttctttctc 24087245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 25305769 - 25305876
Alignment:
Q  188 ctaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattcttcaagttcctcttctct 286  Q
    ||||| || |||||||||||||| |||| |  |||| | |||||||||||  |||||| ||| ||||| ||  ||||||| ||||||| |||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactcctaggatctcttccaattcttgaat-cttcaagctcctattctct 25305867  T
Q  287 ctaaccctt 295  Q
    |||||||||    
T  25305868 ctaaccctt 25305876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 30245 - 30550
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||    
T  30245 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcatgaatttcaa 30344  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||| |||| |||| || |||    
T  30345 agatagggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaataattaactaaatgattatgatgaaaaataaccccctta 30444  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 299  Q
    ||||||||||| |||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30445 ccttaattatcaccaattattaactcaagcttcacttttgcttctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttc 30544  T
Q  300 ttctct 305  Q
    ||||||    
T  30545 ttctct 30550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 6187 - 5925
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||||    
T  6187 ttttcatacatcatgaacttgcaatttcatcattaacaaatcatttaacatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaa 6088  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||| || |||    
T  6087 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactatatgattatgatgaaaactaaccccctta 5988  T
Q  200 ccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaaccctt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5987 ccttaattatctccaactattagctctagcttcacttttgctcctataattcttcaaaccctt 5925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 59 - 305
Target Start/End: Complemental strand, 5923 - 5676
Alignment:
Q  59 acatattaaaatatatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnn 158  Q
    ||||||| ||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  159 nnnnn-ttaactaaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaa 257  Q
          ||||||| ||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctataattcttcaaa 5724  T
Q  258 cccttgaattcttcaagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5723 cccttgaattcttcaagttcctcttctctctaacccttgttcttctct 5676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 555 - 298
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  555 ttttcatacatcatgaacttgcaatttcatcatctacaattcatttaacatcaaattaacatattcaaatatatctctacaacataagcacaaatttcaa 456  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnnttaactaaatgattatgataaaaactaactcctttac 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||| | |||| || ||||    
T  455 atattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaagaattaactagatgattatgataaagaataaccccgttac 356  T
Q  201 cttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaac 258  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  355 cttaattatcaccaactattagctcaagcttcacttttgctcctatgattcttcaaac 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 71 - 305
Target Start/End: Original strand, 42575 - 42807
Alignment:
Q  71 atatctctacaacataggcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnn-ttaact 169  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||    
T  42575 atatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaact 42674  T
Q  170 aaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattct 269  Q
    ||||||||||||||||||||||| || |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42675 aaatgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattct 42771  T
Q  270 tcaagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  42772 tcaagttcctcttctctctaacccttgttcttctct 42807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11342836 - 11343039
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  11342836 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 11342935  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| || |||    
T  11342936 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 11343035  T
Q  200 cctt 203  Q
    ||||    
T  11343036 cctt 11343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 2031961 - 2032165
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  2031961 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 2032060  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||| ||||||||| ||||||||| || |||    
T  2032061 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaacgattatgatgaaaactaaccccctta 2032160  T
Q  200 cctta 204  Q
    |||||    
T  2032161 cctta 2032165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 21205077 - 21205232
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  21205077 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 21205176  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21205177 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 21205232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 21650846 - 21651001
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  21650846 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 21650945  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  21650946 agattgggttcatgataatcacttattcccataatcaactatgcacagaacaagag 21651001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16105795 - 16105943
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| |   |||||||||||||| |||||||||||||||| |||||||||  ||| |||||||||||||||| |||||||||||||    
T  16105795 ttttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacatatccaaacatatctctacaacataagcacgaatttcaa 16105893  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16105894 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 16105943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 173 - 305
Target Start/End: Original strand, 11584374 - 11584506
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| ||  ||||| || |||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattattcacacccttgaattcttca 11584473  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||| ||||||    
T  11584474 agttcctcttctctctaacccttgtttttctct 11584506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 22662774 - 22662653
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||    
T  22662774 atacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatattcaaatatatcactacaacatgagcacgaatttcaaagatt 22662675  T
Q  106 gggttcatgataatcacttatt 127  Q
    |||||||  |||||||||||||    
T  22662674 gggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 25004971 - 25005094
Alignment:
Q  5 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagat 104  Q
    |||||||||||||| ||||||||||| || ||||||||| ||| | | ||||||||| | | ||| ||||| || ||||||  |||||||||||||||||    
T  25004971 catacatcatgaacatgcaatttcataattaacaattcaattatccttaaattaacacactcaaacatatcacttcaacatgagcacgaatttcaaagat 25005070  T
Q  105 tgggttcatgataatcacttattc 128  Q
    ||||||||  ||||||||||||||    
T  25005071 tgggttcacaataatcacttattc 25005094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 5450770 - 5450645
Alignment:
Q  170 aaatgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattc 268  Q
    ||||||||||||| ||  ||||| || |||||||||||||   ||| |  |||| | ||||||||||| ||||||| ||| ||||| ||  ||||||| |    
T  5450770 aaatgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctcctaggatctcttccaattcttgaat-c 5450672  T
Q  269 ttcaagttcctcttctctctaaccctt 295  Q
    |||||| ||||||||||||||||||||    
T  5450671 ttcaagctcctcttctctctaaccctt 5450645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 7728792 - 7728877
Alignment:
Q  222 gctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaacccttgttcttctctctc 308  Q
    |||||||||||||||| |||||||    ||||| || | |||||| ||||||||||||||||||||||||| || ||||||| ||||    
T  7728792 gctctagcttcactttagctcctagctctcttctaatctttgaat-cttcaagttcctcttctctctaaccttttttcttctttctc 7728877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 23494288 - 23494365
Alignment:
Q  220 tagctctagcttcacttttgctcctatgat---tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    |||||| ||||||||||| ||||||| | |   ||||| || |||||||| ||||||||||||||||||||||||||||    
T  23494288 tagctcaagcttcactttagctcctaggttctctcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 23494365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9730486 - 9730424
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  9730486 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 9730424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17909657 - 17909719
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  17909657 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 17909719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 19405952 - 19405982
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  19405952 attcttcaagttcctcttctctctaaccctt 19405982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 1082 - 878
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| |||||||||||||    
T  1082 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaacctctacaacataagcacgaatttcaa 983  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  982 agattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 883  T
Q  200 cctta 204  Q
    |||||    
T  882 cctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 144; Significance: 1e-75; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 55732 - 55936
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||    
T  55732 ttttcctacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaa 55831  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  55832 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 55931  T
Q  200 cctta 204  Q
    |||||    
T  55932 cctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 108179 - 108131
Alignment:
Q  102 gattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaa 108131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 294
Target Start/End: Complemental strand, 93726 - 93656
Alignment:
Q  223 ctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccct 294  Q
    |||||||||||||||||||||||    ||| | || |||||| |||||||||||||||||||||||||||||    
T  93726 ctctagcttcacttttgctcctagctctctcccaatccttga-ttcttcaagttcctcttctctctaaccct 93656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 10087 - 9882
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  10087 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 9988  T
Q  101 agattgggttcatgataatcacttattctcataatcaa-ttatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||        ||||| |||||||||||||||| |||||| || ||    
T  9987 agattgggttcatgataatcacttattttcataatcaatttatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 9888  T
Q  199 acctta 204  Q
    ||||||    
T  9887 acctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 6647 - 6443
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  6647 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttgacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 6548  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||| || |||    
T  6547 agattgggttcatgataagcacctattatcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccctta 6448  T
Q  200 cctta 204  Q
    |||||    
T  6447 cctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13490 - 13285
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  13490 ttttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaa 13391  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag-nnnnnnnttaactaaatgattatgataaaaactaactccttt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||||||||||||||| |||||| || ||    
T  13390 agattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaaccccctt 13291  T
Q  199 acctta 204  Q
    ||||||    
T  13290 acctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21464 - 21432
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcat 33  Q
    |||||||||||||||||||||||||||||||||    
T  21464 ttttcatacatcatgaacttgcaatttcatcat 21432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4551 - 4402
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||    
T  4551 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatttaaacatatctctacaacataagcactaatttcaa 4452  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4451 agattgggttcatgataatcacttattcccataatcaattatgcatagaa 4402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 132 - 5
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  132 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 33  T
Q  101 agattgggttcatgataatcacttattc 128  Q
    ||||||||||||||||||||||||||||    
T  32 agattgggttcatgataatcacttattc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 17508 - 17353
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||| |||| ||||||||    
T  17508 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaaaatcaaattaacatattcaaacatatctctaccacataagcactaatttcaa 17409  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17408 agattgggttcatgataatcaattattctcataatcaattatgcatagaacaagag 17353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 12624 - 12418
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattca--tttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||||||||| ||| |||||||||||||||| |||| ||||||    
T  12624 ttttcatacatcatgaacttgcaatttcatcatcaacaattcacattaatcatcaaattaacatattcaaacatatctctacaacataagcacaaatttc 12525  T
Q  99 aaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactcctt 197  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||| || |    
T  12524 aaagattgggttcatgataataacttattcccataatcaattatgcatagaacaaaagaaaaagaattaactaaatgattatgataaaaactaaccccct 12425  T
Q  198 tacctta 204  Q
    |||||||    
T  12424 tacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 12344 - 12316
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  12344 cctcttctctctaacccttgttcttctct 12316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 15100 - 15236
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||    
T  15100 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaa 15199  T
Q  101 agattgggttcatgataatcacttattctcataatca 137  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15200 agattgggttcatgataatcacttattcccataatca 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 117; Significance: 1e-59; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 193592 - 193396
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||         |||||||||||||    
T  193592 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctct---------gcacgaatttcaa 193502  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-nnnnnnnttaactaaatgattatgataaaaactaactccttta 199  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||| |||||| || |||    
T  193501 tgattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 193402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 186630 - 186566
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186630 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 186566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 193323 - 193295
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  193323 cctcttctctctaacccttgttcttctct 193295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 173 - 305
Target Start/End: Original strand, 1701 - 1833
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| || |||||| || |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattcttcaaacccttgaattcttca 1800  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||||||    
T  1801 agttcctcttctctctaacccttgttcttctct 1833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 173 - 305
Target Start/End: Complemental strand, 15398 - 15266
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| ||  ||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattcttcaaacccttgaattcttca 15299  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||||||    
T  15298 agttcctcttctctctaacccttgttcttctct 15266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 36760 - 36732
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  36760 cctcttctctctaacccttgttcttctct 36732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 173 - 305
Target Start/End: Complemental strand, 19881 - 19749
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| || |||||| || |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattcttcaaacccttgaattcttca 19782  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    || ||||||||||||||||||||||||||||||    
T  19781 agctcctcttctctctaacccttgttcttctct 19749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 173 - 305
Target Start/End: Complemental strand, 24185 - 24053
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| || |||||| || |||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattcttcaaacccttgaattcttca 24086  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    || ||||||||||||||||||||||||||||||    
T  24085 agctcctcttctctctaacccttgttcttctct 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 173 - 305
Target Start/End: Original strand, 94 - 226
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| || |||||| || |||||||||||||| |||||||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctccaatgattattcaaacccttgaattcttca 193  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||||||    
T  194 agttcctcttctctctaacccttgttcttctct 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 173 - 305
Target Start/End: Original strand, 20493 - 20625
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| || |||||| || |||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattcttcaaacccttgaattcttca 20592  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    || ||||||||||||||||||||||||||||||    
T  20593 agctcctcttctctctaacccttgttcttctct 20625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 130708 - 130856
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| |   |||||||||||||| |||||||||||||||| ||||| |||  ||| |||||||||||||||  |||||||||||||    
T  130708 ttttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacgtatccaaacatatctctacaacatgagcacgaatttcaa 130806  T
Q  101 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  130807 agattgggttcatgataatcacttattctcataatcaattatgcatagaa 130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 173 - 305
Target Start/End: Complemental strand, 6335 - 6203
Alignment:
Q  173 tgattatgataaaaactaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttca 272  Q
    |||||||||| || |||||| || |||||||||||||| || ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatgattattcaaacccttgaattcttca 6236  T
Q  273 agttcctcttctctctaacccttgttcttctct 305  Q
    ||||| |||||||||||||||||||||||||||    
T  6235 agttcatcttctctctaacccttgttcttctct 6203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 44214 - 44071
Alignment:
Q  5 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagat 104  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| | ||| ||||| |||||||||  |||||||||||||||||    
T  44214 catacatcatgaacatgcaatttcatcatcaacaattcaattaccatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagat 44115  T
Q  105 tgggttcatgataatcacttattctcataatcaattatgcatag 148  Q
    | ||||||  ||||||||||||||  ||||||| ||||||||||    
T  44114 taggttcacaataatcacttattcaaataatcacttatgcatag 44071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 295
Target Start/End: Original strand, 262 - 548
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||| ||||||||||||||    
T  262 atacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcaagaatttcaaagatt 361  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagagnnnnnnnttaactaaatgattatgataaaaactaactcctttaccttaa 205  Q
    |||||||  ||||||||||||||   ||| || |||| |||| |||||  |       |  ||||||||||||  || ||  ||||| || |||||| |     
T  362 gggttcacaataatcacttattcaattaagcacttattcatacaacaaatg--aaaactacactaaatgattacaatgaattctaacccccttacctcag 459  T
Q  206 ttatctccaactattagctctagcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| |||| |  |||||| ||||||||||| |||||||    ||||| || ||||||| |||||||| ||||||||||||||||||||    
T  460 ttatcaccaattcctagctcaagcttcactttagctcctagccctcttccaatccttgaa-tcttcaagctcctcttctctctaaccctt 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 1600 - 1478
Alignment:
Q  6 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| | ||| ||||| |||||||||  ||||||||||||||||||    
T  1600 atacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagatt 1501  T
Q  106 gggttcatgataatcacttattc 128  Q
    |||||||  ||||||| ||||||    
T  1500 gggttcacaataatcatttattc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 3936 - 3786
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaa----atatatctctacaacataggcacgaatttcaaagatt 105  Q
    ||||||||| |||||||||||||| ||||||||| | | ||||||||||||||| | ||    ||||||| |||||||||  ||||||||||||||  ||    
T  3936 atcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatatatcactacaacatgagcacgaatttcaaaagtt 3837  T
Q  106 gggttcatgataatcacttattctcataatcaattatgcatagaacaagag 156  Q
    || ||||  ||||||||||||||  |||| || |||||||||||| |||||    
T  3836 ggtttcacaataatcacttattcaaataagcacttatgcatagaaaaagag 3786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 95130 - 95192
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  95130 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacata 95192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 6043 - 6133
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||| |||||||| | ||| ||||| |||||||||  |||| ||||||||    
T  6043 atcatgaacatgcaatttcatcatcaacaattcaattatcatcaatttaacatactcaaacatatcactacaacatgagcacaaatttcaa 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9611 - 9565
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcattta 47  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  9611 ttttcatacatcataaacttgcaatttcatcatcaacaattcattta 9565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 17850 - 17962
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaatatatctctacaacataggcacgaatttcaa 100  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| | |||  |||| | | ||||   ||||||| |||||    
T  17850 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaattcaa 17949  T
Q  101 agattgggttcat 113  Q
    |||||||||||||    
T  17950 agattgggttcat 17962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 28952 - 28990
Alignment:
Q  267 tcttcaagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  28952 tcttcaagttcctcttctctctaacccttgttcctctct 28990  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 11252 - 11319
Alignment:
Q  227 agcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||||||||| |||||||    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  11252 agcttcactttagctcctagctctcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 11319  T

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Target: scaffold0123; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 8386 - 8453
Alignment:
Q  227 agcttcacttttgctcctatgattcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||||||||| |||||||    ||||| || ||||||||  |||||||||||||||||||||||||||    
T  8386 agcttcactttagctcctagctctcttccaatccttgaata-ttcaagttcctcttctctctaaccctt 8453  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 35816 - 35923
Alignment:
Q  188 ctaactcctttaccttaattatctccaactattagctctagcttcacttttgctcctatgat-tcttcaaacccttgaattcttcaagttcctcttctct 286  Q
    ||||| || |||||||||||||| |||| |  |||| | ||||||||||| ||||||| ||| ||||| ||  |||||| |||||||| || ||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcctaggatctcttccaattcttgaa-tcttcaagctcttcttctct 35914  T
Q  287 ctaaccctt 295  Q
    |||||||||    
T  35915 ctaaccctt 35923  T

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Target: scaffold0013; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 7165 - 7112
Alignment:
Q  10 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||| ||||| |||||||||||||||||| ||| || ||| ||||||||    
T  7165 atcatgaacatgcaaattcatcatcaacaattcaattatcaacaagttaacata 7112  T

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Target: scaffold0396 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 11542 - 11511
Alignment:
Q  265 attcttcaagttcctcttctctctaacccttg 296  Q
    ||||||||||||||||||||||||||||||||    
T  11542 attcttcaagttcctcttctctctaacccttg 11511  T

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Target: scaffold0338 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 9400 - 9431
Alignment:
Q  265 attcttcaagttcctcttctctctaacccttg 296  Q
    ||||||||||||||||||||||||||||||||    
T  9400 attcttcaagttcctcttctctctaacccttg 9431  T

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Target: scaffold0106 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 305
Target Start/End: Original strand, 42127 - 42166
Alignment:
Q  266 ttcttcaagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  42127 ttcttcaagttctccttctctctaacccttgttcttctct 42166  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 112381 - 112350
Alignment:
Q  265 attcttcaagttcctcttctctctaacccttg 296  Q
    ||||||||||||||||||||||||||||||||    
T  112381 attcttcaagttcctcttctctctaacccttg 112350  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 305
Target Start/End: Complemental strand, 51047 - 51008
Alignment:
Q  266 ttcttcaagttcctcttctctctaacccttgttcttctct 305  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  51047 ttcttcaagttctccttctctctaacccttgttcttctct 51008  T

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Target: scaffold0615 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6319 - 6257
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  6319 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 6257  T

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Target: scaffold0367 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17417 - 17355
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  17417 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 17355  T

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Target: scaffold0335 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5684 - 5622
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  5684 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 5622  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 61330 - 61268
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  61330 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 61268  T

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Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 49009 - 49037
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  49009 cctcttctctctaacccttgttcttctct 49037  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 12102 - 12132
Alignment:
Q  265 attcttcaagttcctcttctctctaaccctt 295  Q
    |||||||||||||||||||||||||||||||    
T  12102 attcttcaagttcctcttctctctaaccctt 12132  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 165069 - 165007
Alignment:
Q  1 ttttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 63  Q
    ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  165069 ttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacata 165007  T

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Target: scaffold0554 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Original strand, 2328 - 2357
Alignment:
Q  265 attcttcaagttcctcttctctctaaccct 294  Q
    ||||||||||||||||||||||||||||||    
T  2328 attcttcaagttcctcttctctctaaccct 2357  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 33576 - 33532
Alignment:
Q  250 tcttcaaacccttgaattcttcaagttcctcttctctctaaccctt 295  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  33576 tcttccaatccttgaat-cttcaagttcctcttctctctaaccctt 33532  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 12525 - 12553
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  12525 cctcttctctctaacccttgttcttctct 12553  T

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Target: scaffold0266 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 1536 - 1564
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  1536 cctcttctctctaacccttgttcttctct 1564  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 147012 - 147040
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  147012 cctcttctctctaacccttgttcttctct 147040  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 149063 - 149091
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  149063 cctcttctctctaacccttgttcttctct 149091  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 272436 - 272464
Alignment:
Q  277 cctcttctctctaacccttgttcttctct 305  Q
    |||||||||||||||||||||||||||||    
T  272436 cctcttctctctaacccttgttcttctct 272464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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