View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6149_high_17 (Length: 307)
Name: NF6149_high_17
Description: NF6149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6149_high_17 |
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| [»] scaffold1444 (1 HSPs) |
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Alignment Details
Target: scaffold1444 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold1444
Description:
Target: scaffold1444; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 209 - 485
Alignment:
| Q |
15 |
aaatcttatgcataactcgtaagagttctatctatctaagttttctaaataaaactagttctaaactaattagaactattggtgagaacataaggttctt |
114 |
Q |
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| T |
209 |
aaatcttatgcataactcatatgagttttatctatctaagttttctaaataaaactagttctaaactaattagaactattggtgagaacataaggttctt |
308 |
T |
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| Q |
115 |
gtgtctttgatgtaaagaaatttctatccttgttagggttgaactaaatttgccaatcacaaagacctatcgtttcacttaaatcttaaaagatactaat |
214 |
Q |
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| T |
309 |
gtgtctttgatgttaagaaatttctatccttgttagggttgaactaaatttgccaatcacaaagacctatcgtttcacttaaatcttaaaagatactaat |
408 |
T |
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| Q |
215 |
gaagttgtgtgcttaatgacttgtcttaaaagtcattaaaatttaaaactcctctaaaatacatatcacttcaatat |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
409 |
gaagttgtgtgcttaatgacttgtcttaaaagtcattaaaatttaaaactcctctaaaatacatatcacttcaatat |
485 |
T |
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