View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6149_high_21 (Length: 237)
Name: NF6149_high_21
Description: NF6149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6149_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 38040320 - 38040099
Alignment:
| Q |
1 |
aattttctcaaatccaaaacatgaagtccaaggctgtagtacttgcatcgctgatggaatgaccagcatctccacattcatatagctcagtgcctgcatg |
100 |
Q |
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| T |
38040320 |
aattttctcaaatccaaaacatgaagtccaagtctgtagtacttgcatcgctgatggaatgaccagcatctccacattcatatagctcagtgcctgcatg |
38040221 |
T |
|
| Q |
101 |
catgtacgtagcaatatattatgtattaaatataatttttaagtagaataaaagtcatactaacttatgccctaaatacacaagataaagagctaaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38040220 |
catgtacgtagcaatatattatgtattaaatataatttttaagtagaataaaagtcatactaacttatgccctaaatacacaagataaagagctaaaatt |
38040121 |
T |
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| Q |
201 |
gaattgaactcaccgactcaat |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
38040120 |
gaattgaactcaccgactcaat |
38040099 |
T |
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