View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6149_low_11 (Length: 381)
Name: NF6149_low_11
Description: NF6149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6149_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 32964902 - 32965162
Alignment:
| Q |
11 |
atcatcaaatctaatgtcaatggttgttaatatagtatagtagacctttatgttaatttgggattaacattgtaacaatagtatgagtttaatatgcacc |
110 |
Q |
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| T |
32964902 |
atcatcaaatctaatgtctatggttgttaatatagtatagtagacctttatgttaatttgggattaacattgtaacaatagcatgagtttaatatgtacc |
32965001 |
T |
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| Q |
111 |
aaatatatataggaggggcctaaaaaatgagatgaagtgcaaattatattttaaaaagacacaaaatatatacaagatgttttaaagaggattcaaatat |
210 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32965002 |
aaatatatataggaggggtctaaaaaatgagatgaagtgcaaattatattttaaaaagacacaaa----atacaagatgttttaaagaggattcaaatat |
32965097 |
T |
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| Q |
211 |
attcaaagctattaattatcaatgaaaaatgttaatgagtgccttatagtattgtttataagtctaaaaaa |
281 |
Q |
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||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32965098 |
attcaaagctattaattattaatgaaaaatgttaatgagtgc------gtattgtttataagtctaaaaaa |
32965162 |
T |
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