View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6149_low_21 (Length: 238)
Name: NF6149_low_21
Description: NF6149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6149_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 32965240 - 32965462
Alignment:
| Q |
1 |
ttggtaatttagctatatcttgttttacagaggtgactggagtgttgattaatgggttagtcgaagcagaattcaacaaaaagcaggcaacattgctaaa |
100 |
Q |
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| T |
32965240 |
ttggtaatttagctatatcttgttttacagaggtgactggagtgttgattaatgggttagtcgaagcagaattcaacaaaaagcaggcaacattgctaaa |
32965339 |
T |
|
| Q |
101 |
acctaaagaaccaatctagagtagtaagatatataaatataattccaatatggaacctagtactagtagcaatgttacagattcagagttcgtggaaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32965340 |
acctaaagaaccaatctagagtagtaagatatataaatataattccaatatggaacctagtactagtagcaatgttacagattcagagttcgtggaaata |
32965439 |
T |
|
| Q |
201 |
caattggatgtacatgaagttgt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
32965440 |
caattggatgtacatgaagttgt |
32965462 |
T |
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