View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6149_low_4 (Length: 512)
Name: NF6149_low_4
Description: NF6149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6149_low_4 |
 | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
| [»] scaffold0573 (1 HSPs) |
| | |
|
| [»] scaffold0308 (2 HSPs) |
| | |
|
| [»] scaffold0652 (1 HSPs) |
| | |
|
| [»] scaffold0572 (1 HSPs) |
| | |
|
| [»] scaffold0429 (1 HSPs) |
| | |
|
| [»] scaffold0051 (2 HSPs) |
| | |
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| [»] scaffold0014 (2 HSPs) |
| | |
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| [»] scaffold0019 (2 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
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| [»] scaffold0086 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 42)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 185 - 496
Target Start/End: Original strand, 30999531 - 30999841
Alignment:
| Q |
185 |
cctcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaa |
284 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30999531 |
cctcttacctagtttcaattttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaaggaa |
30999630 |
T |
|
| Q |
285 |
taactagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cc |
383 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
30999631 |
taactagttcataaattttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccgtgtaacaaaaccc |
30999730 |
T |
|
| Q |
384 |
ttggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcac |
483 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
30999731 |
ttggatcataacac--tatgtatagacatctagattatagcctttgaccaaaacatcttcaaaaactttttgcgcatcctctagccttccactttggcac |
30999828 |
T |
|
| Q |
484 |
agtccactgataa |
496 |
Q |
| |
|
||||||||||||| |
|
|
| T |
30999829 |
agtccactgataa |
30999841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 185 - 507
Target Start/End: Original strand, 24889779 - 24890102
Alignment:
| Q |
185 |
cctcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaa |
284 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |
|
|
| T |
24889779 |
cctcttacctagttttaattttacagtagccctctcacaatcatttcacgaagaagtttctctgccgtgtcattttcatctttttcgaacagagaaagaa |
24889878 |
T |
|
| Q |
285 |
taactagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cc |
383 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| |||||||||| |||||| || |
|
|
| T |
24889879 |
taactagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacagcaaggccaatgctttatcaaagaagcccttgtcacaaaaccc |
24889978 |
T |
|
| Q |
384 |
ttggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcac |
483 |
Q |
| |
|
||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| |
|
|
| T |
24889979 |
ttggatcataacagtatatgcatagacatctagattatagcctttgaccaaaagatcttcaaaaacgttttgcgcatcctctagccttccactttggcac |
24890078 |
T |
|
| Q |
484 |
agtccactgataagaatagtgtat |
507 |
Q |
| |
|
||||| |||||||||| |||||| |
|
|
| T |
24890079 |
agtcccttgataagaatggtgtat |
24890102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 191 - 507
Target Start/End: Complemental strand, 24731315 - 24730998
Alignment:
| Q |
191 |
acctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataacta |
290 |
Q |
| |
|
||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||| |
|
|
| T |
24731315 |
acctagtttcagtcttacagtagacctcttgcaatcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataacta |
24731216 |
T |
|
| Q |
291 |
gttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggat |
389 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||||||| |
|
|
| T |
24731215 |
tttcataagttttagcatttggaatgcatccattgtcttccatttttgacagcaaggccaacgctgcatcaaacaagcccttgacacaaaacccttggat |
24731116 |
T |
|
| Q |
390 |
cataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtcca |
489 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | | |||||| || ||||||||||||||| ||| |
|
|
| T |
24731115 |
cataacggtatatgtatagacatctagattatagcctttgaccaaaagatcttcaaaaactttttgtgcatcctccagttttccactttggcacaatccc |
24731016 |
T |
|
| Q |
490 |
ctgataagaatagtgtat |
507 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
24731015 |
ttgataagaacagtgtat |
24730998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 191 - 507
Target Start/End: Original strand, 24886105 - 24886422
Alignment:
| Q |
191 |
acctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataacta |
290 |
Q |
| |
|
||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| | ||||||| |
|
|
| T |
24886105 |
acctagtttcagttttacagtagacctctcgcgatcatttcacggagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataacta |
24886204 |
T |
|
| Q |
291 |
gttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggat |
389 |
Q |
| |
|
||||||| ||||||||| ||||||||| ||||||||||||||||| |||| |||||||||| |||| | |||||| ||||||| |||||| |||||||| |
|
|
| T |
24886205 |
tttcataaattttagcatctggaatgcagccattgtcttccattttggacagcaaggccaacgcttccttaaacaaacccttgtcacaaaacccttggat |
24886304 |
T |
|
| Q |
390 |
cataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtcca |
489 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||| ||| |
|
|
| T |
24886305 |
cataacagtatatgtatagacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgtgcatccttcaattttccactttggcacaatccc |
24886404 |
T |
|
| Q |
490 |
ctgataagaatagtgtat |
507 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
24886405 |
ttgataaaaatagtgtat |
24886422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 187 - 507
Target Start/End: Complemental strand, 29099807 - 29099486
Alignment:
| Q |
187 |
tcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaata |
286 |
Q |
| |
|
|||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| | ||| |
|
|
| T |
29099807 |
tcttacatagtttcagttttacggtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttcatcttttttgaacagagaaaggata |
29099708 |
T |
|
| Q |
287 |
actagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cctt |
385 |
Q |
| |
|
| || ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||| | |||||| |||| |
|
|
| T |
29099707 |
attatttcataagttttagcatctggaatgcagccattgtcttccatttttgacagcaaggccaacgcttcattaaacaagccctcgacacaaaaccctt |
29099608 |
T |
|
| Q |
386 |
ggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacag |
485 |
Q |
| |
|
||||||||| |||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||| || | |||||| || |||||||||||||||| |
|
|
| T |
29099607 |
ggatcataatggtatatgcatagacatcaagattgtagcctttgaccaaaagatcttcaaaaactttacgtgcatcctccagttttccactttggcacag |
29099508 |
T |
|
| Q |
486 |
tccactgataagaatagtgtat |
507 |
Q |
| |
|
||| ||||||||||| ||||| |
|
|
| T |
29099507 |
tcctttgataagaatactgtat |
29099486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 187 - 507
Target Start/End: Complemental strand, 29116725 - 29116404
Alignment:
| Q |
187 |
tcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaata |
286 |
Q |
| |
|
|||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| | ||| |
|
|
| T |
29116725 |
tcttacatagtttcagttttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttcatcttttttgaacagagaaaggata |
29116626 |
T |
|
| Q |
287 |
actagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cctt |
385 |
Q |
| |
|
| || ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||| | |||||| |||| |
|
|
| T |
29116625 |
attatttcataagttttagcatctggaatgcagccattgtcttccatttttgacagcaaggccaacgcttcattaaacaagccctcgacacaaaaccctt |
29116526 |
T |
|
| Q |
386 |
ggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacag |
485 |
Q |
| |
|
||||||||| ||||||||| |||| |||||||| |||||||||||||||| ||||||||||||| || | |||||| || |||||||||||||||| |
|
|
| T |
29116525 |
ggatcataatggtatatgtatcgacatttagattatggcctttgaccaaaagaccttcaaaaactttacgtgcatcctccagttttccactttggcacag |
29116426 |
T |
|
| Q |
486 |
tccactgataagaatagtgtat |
507 |
Q |
| |
|
||| ||||||||||| ||||| |
|
|
| T |
29116425 |
tcctttgataagaatactgtat |
29116404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 224 - 507
Target Start/End: Original strand, 29357551 - 29357835
Alignment:
| Q |
224 |
atcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccat |
323 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| | |||| || ||||||||||||||||||||||||||| |||| |
|
|
| T |
29357551 |
atcatttcacaaagaagtttctctgccatctcattttcatcttttttgaacagagaaaggataattatttcataagttttagcatttggaatgcagccat |
29357650 |
T |
|
| Q |
324 |
tgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattata |
422 |
Q |
| |
|
|||||||||||||||| | ||||| |||| ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |||| |||||||| |
|
|
| T |
29357651 |
tgtcttccatttttgatagcaaggtcaacgcttcatcaaacaagcccttgtcacaaaagccttggatcataacagtatatgtatagacatttagattatg |
29357750 |
T |
|
| Q |
423 |
gcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||||||||||||||||||||||||||| || || | |||||| | | ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
29357751 |
gcctttgaccaaaagatcttcaaaaaccttccgtgcatcctccaatttcccactttggcacaatcccttgataagaatagtgtat |
29357835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 29882862 - 29882578
Alignment:
| Q |
224 |
atcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccat |
323 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||| || ||||||||||||||||| ||||||||| |||| |
|
|
| T |
29882862 |
atcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataattatttcataagttttagcatctggaatgcatccat |
29882763 |
T |
|
| Q |
324 |
tgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattata |
422 |
Q |
| |
|
| |||||||||||||||| |||||||||| |||| |||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||| ||||| || |
|
|
| T |
29882762 |
tctcttccatttttgacagcaaggccaacgcttcgtcaaacaagcccttgtcacaaaacccttggatcataacggtatatgcatagacatcaagattgta |
29882663 |
T |
|
| Q |
423 |
gcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||| | |||||||| |||||| ||| ||| ||||||||||||| |
|
|
| T |
29882662 |
gcctttgaccaaaagatcttcaaaaacttttcgtgcatcctccaattttccacttcggcacaatcccttgacaagaatagtgtat |
29882578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 29910018 - 29909734
Alignment:
| Q |
224 |
atcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccat |
323 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||| || ||||||||||||||||| ||||||||| |||| |
|
|
| T |
29910018 |
atcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataattatttcataagttttagcatctggaatgcatccat |
29909919 |
T |
|
| Q |
324 |
tgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattata |
422 |
Q |
| |
|
| |||||||||||||||| |||||||||| |||| |||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||| ||||| || |
|
|
| T |
29909918 |
tctcttccatttttgacagcaaggccaacgcttcgtcaaacaagcccttgtcacaaaacccttggatcataacggtatatgcatagacatcaagattgta |
29909819 |
T |
|
| Q |
423 |
gcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||| | |||||||| |||||| ||| ||| ||||||||||||| |
|
|
| T |
29909818 |
gcctttgaccaaaagatcttcaaaaacttttcgtgcatcctccaattttccacttcggcacaatcccttgacaagaatagtgtat |
29909734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 204 - 507
Target Start/End: Complemental strand, 29078974 - 29078670
Alignment:
| Q |
204 |
tttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttt |
303 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| | |||| || |||||||||||| |
|
|
| T |
29078974 |
tttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttcatcttttttgaacagagaaaggataattatttcataagtttt |
29078875 |
T |
|
| Q |
304 |
agcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatat |
402 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||| |||||||||||||| ||||| |
|
|
| T |
29078874 |
agcatctggaatgcagccattgtcttccatttttgacagcaaggccaacgcttcattaaacaagcccttgacacaaaacccttggatcataacggtatat |
29078775 |
T |
|
| Q |
403 |
gtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatag |
502 |
Q |
| |
|
| ||| ||||| ||||| ||||||||||| |||||||||||||||||||| || | |||||| || ||||||||| |||| || | |||||||||| |
|
|
| T |
29078774 |
gcatagacatcaagattgtagcctttgacgaaaagatcttcaaaaactttacgtgcatcctccagttttccacttttacacaatcaatcaataagaatag |
29078675 |
T |
|
| Q |
503 |
tgtat |
507 |
Q |
| |
|
||||| |
|
|
| T |
29078674 |
tgtat |
29078670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 29914419 - 29914135
Alignment:
| Q |
224 |
atcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccat |
323 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||| || ||||||||||||||||| ||||||||| |||| |
|
|
| T |
29914419 |
atcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataattatttcataagttttagcatctggaatgcatccat |
29914320 |
T |
|
| Q |
324 |
tgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattata |
422 |
Q |
| |
|
| |||||||||||||||| |||||||||| |||||||||||||| |||||| |||||| |||||||||||||| |||||| ||| ||||| ||||| || |
|
|
| T |
29914319 |
tctcttccatttttgacagcaaggccaacgcttcatcaaacaagtccttgtcacaaaacccttggatcataacggtatatgcatagacatcaagattgta |
29914220 |
T |
|
| Q |
423 |
gcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||||| | |||||||| |||||| ||| ||| ||||||||||||| |
|
|
| T |
29914219 |
gcctttgaccaaaagatcttcaaaaactttttgtgcatcctccaattttccacttcggcacaatcccttgacaagaatagtgtat |
29914135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 204 - 507
Target Start/End: Complemental strand, 29074210 - 29073906
Alignment:
| Q |
204 |
tttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttt |
303 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| | |||| || |||||||||||| |
|
|
| T |
29074210 |
tttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttcatcttttttgaacagagaaaggataattatttcataagtttt |
29074111 |
T |
|
| Q |
304 |
agcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatat |
402 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||| |||||||||||||| ||||| |
|
|
| T |
29074110 |
agcatctggaatgcggccattgtcttccatttttgacagcaaggccaacgcttcattaaacaagcccttgacacaaaacccttggatcataacggtatat |
29074011 |
T |
|
| Q |
403 |
gtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatag |
502 |
Q |
| |
|
| ||| ||||| ||||| ||||||||||| |||||||||||||||||||| || | |||||| || ||||||||| |||| || | |||||||||| |
|
|
| T |
29074010 |
gcatagacatcaagattgtagcctttgacgaaaagatcttcaaaaactttacgtgcatcctccagttttccacttttacacaatcaatcaataagaatag |
29073911 |
T |
|
| Q |
503 |
tgtat |
507 |
Q |
| |
|
||||| |
|
|
| T |
29073910 |
tgtat |
29073906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 204 - 507
Target Start/End: Complemental strand, 29106783 - 29106479
Alignment:
| Q |
204 |
tttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttt |
303 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| | |||| || |||||||||||| |
|
|
| T |
29106783 |
tttacagtagacctctcgcgatcatttcacgaagaagtttctctgccatatcattttcatcttttttgaacagagaaaggataattatttcataagtttt |
29106684 |
T |
|
| Q |
304 |
agcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatat |
402 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||| |||||||||||||| ||||| |
|
|
| T |
29106683 |
agcatctggaatgcggccattgtcttccatttttgacagcaaggccaacgcttcattaaacaagcccttgacacaaaacccttggatcataacggtatat |
29106584 |
T |
|
| Q |
403 |
gtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatag |
502 |
Q |
| |
|
| ||| ||||| ||||| ||||||||||| |||||||||||||||||||| || | |||||| || ||||||||| |||| || | |||||||||| |
|
|
| T |
29106583 |
gcatagacatcaagattgtagcctttgacgaaaagatcttcaaaaactttacgtgcatcctccagttttccacttttacacaatcaatcaataagaatag |
29106484 |
T |
|
| Q |
503 |
tgtat |
507 |
Q |
| |
|
||||| |
|
|
| T |
29106483 |
tgtat |
29106479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 29912399 - 29912115
Alignment:
| Q |
224 |
atcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccat |
323 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||| || ||||||||||||||||| ||||||||| |||| |
|
|
| T |
29912399 |
atcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataattatttcataagttttagcatctggaatgcatccat |
29912300 |
T |
|
| Q |
324 |
tgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattata |
422 |
Q |
| |
|
| |||||||||||||||| |||||||||| |||| |||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||| || || || |
|
|
| T |
29912299 |
tctcttccatttttgacagcaaggccaacgcttcgtcaaacaagcccttgtcacaaaacccttggatcataacggtatatgcatagacatcaaggttgta |
29912200 |
T |
|
| Q |
423 |
gcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | |||||| | ||||||||||||||| ||| ||| |||||| |||||| |
|
|
| T |
29912199 |
gcctttgaccagaagatcttcaaaaacttttcgtgcatcctccaattttccactttggcacaatcccttgacaagaatggtgtat |
29912115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 29903664 - 29903389
Alignment:
| Q |
224 |
atcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccat |
323 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||| || ||||||||||||||||| ||||||||| |||| |
|
|
| T |
29903664 |
atcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataattatttcataagttttagcatctggaatgcatccat |
29903565 |
T |
|
| Q |
324 |
tgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattata |
422 |
Q |
| |
|
| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||| ||||| || |
|
|
| T |
29903564 |
tctcttccatttttgacagcaaggccaacacttcatcaaacaagcccttgtcacaaaacccttggatcataacggtatatgcatagacatcaagattgta |
29903465 |
T |
|
| Q |
423 |
gcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||| ||||||||||||||||||||| | |||||| | |||||||| |||||| ||| ||| |||||| |||||| |
|
|
| T |
29903464 |
gcc---------aagatcttcaaaaacttttcgtgcatcctccaattttccacttcggcacaatcccttgacaagaatggtgtat |
29903389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 205 - 448
Target Start/End: Original strand, 29348151 - 29348395
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||| ||| |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||| || ||||||||||||| |
|
|
| T |
29348151 |
ttacaatagacctcgcgcgatcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataattatttcataagtttta |
29348250 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatg |
403 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||| | |||| |||||| ||||| |||||||| |||||| |
|
|
| T |
29348251 |
gcatttggaatgcagccattgtcttccatttttgacagcaaggccaatgctttgtcaaacaagtcgttgtcacaaaacccttgaatcataacggtatatg |
29348350 |
T |
|
| Q |
404 |
tatatacatctagattatagcctttgaccaaaagatcttcaaaaa |
448 |
Q |
| |
|
|||| ||| || ||||||||| ||||| |||||||| ||||||| |
|
|
| T |
29348351 |
tatagacagttatattatagcccttgactaaaagatcctcaaaaa |
29348395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 187 - 507
Target Start/End: Complemental strand, 29867113 - 29866792
Alignment:
| Q |
187 |
tcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaata |
286 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||| ||| | |||||||||||||| || || |||||||| || |
|
|
| T |
29867113 |
tcttacctagtttcagtcttacaataggcctctcgtaatcatttcacgaagaagtttctccgccttatcattttcatctttatcaaacagagaacggatg |
29867014 |
T |
|
| Q |
287 |
actagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cctt |
385 |
Q |
| |
|
| || |||||||||| |||||||||| ||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||| || | |
|
|
| T |
29867013 |
attatttcataagttaaggcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaaacaagcccttgttacaaaacccat |
29866914 |
T |
|
| Q |
386 |
ggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacag |
485 |
Q |
| |
|
|||||||||| ||||||| | ||| || |||||||||||||||||||||||| ||||||| || | | ||||||||| ||||||| || ||||| |
|
|
| T |
29866913 |
ggatcataacggtatatgtgttgacagttatattatagcctttgaccaaaagatcctcaaaaatattatgtgcatcctctagtcttccacctttacacag |
29866814 |
T |
|
| Q |
486 |
tccactgataagaatagtgtat |
507 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
29866813 |
tccatcaataagaatagtgtat |
29866792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 188 - 507
Target Start/End: Complemental strand, 29887760 - 29887440
Alignment:
| Q |
188 |
cttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataa |
287 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||||| |||||||||||||||||| ||||| ||| | ||||||||||| || || || |||||||| || | |
|
|
| T |
29887760 |
cttacctagtttcagtcttacaataggcctctcgtaatcatttcacgaagaagattctccgccttatcattttcatcattatcaaacagagaacggatga |
29887661 |
T |
|
| Q |
288 |
ctagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttg |
386 |
Q |
| |
|
|| |||||||||| |||||||||| ||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||| || || |
|
|
| T |
29887660 |
ttatttcataagttaaggcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaaacaagcccttgttacaaaacccatg |
29887561 |
T |
|
| Q |
387 |
gatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagt |
486 |
Q |
| |
|
||||||||| ||||||| | ||| || |||||||||||||||||||||||| ||||||| || | | ||||||||| ||||||| || |||||| |
|
|
| T |
29887560 |
gatcataacggtatatgtgttgacagttatattatagcctttgaccaaaagatcctcaaaaatattatgtgcatcctctagtcttccacctttacacagt |
29887461 |
T |
|
| Q |
487 |
ccactgataagaatagtgtat |
507 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
29887460 |
ccatcaataagaatagtgtat |
29887440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 190 - 507
Target Start/End: Original strand, 28926085 - 28926403
Alignment:
| Q |
190 |
tacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataact |
289 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| || || |||||||| || | | |
|
|
| T |
28926085 |
tacctagtttcaatcttacaatagccctctcgtaatcatttcaagaagaagtttctccgccttatcattttcatctttatcaaacagagaacggatgatt |
28926184 |
T |
|
| Q |
290 |
agttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaac-cttgga |
388 |
Q |
| |
|
| ||||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||| ||| |||| ||||||| | |||| |
|
|
| T |
28926185 |
atttcataagtaacggcgtttggaatgcaaccattttcttccatttttgacaacatagccaatgcttcaccaaacatgccgttgttacaaaacacatgga |
28926284 |
T |
|
| Q |
389 |
tcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtcc |
488 |
Q |
| |
|
||||||| ||||||| | ||||| || |||||| ||||||||||||||||| ||||||| ||| | | |||||| | ||||||| || |||||||| |
|
|
| T |
28926285 |
tcataacggtatatgtgtttacatttatattataacctttgaccaaaagatcctcaaaaatattttgtgcatcctccggtcttccacctttacacagtcc |
28926384 |
T |
|
| Q |
489 |
actgataagaatagtgtat |
507 |
Q |
| |
|
| | ||||||||||||||| |
|
|
| T |
28926385 |
attaataagaatagtgtat |
28926403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 507
Target Start/End: Original strand, 24271528 - 24271820
Alignment:
| Q |
215 |
cctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaa |
314 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| ||| | ||||||||||| || || || |||||||| || | || |||||||||| ||||||||||| |
|
|
| T |
24271528 |
cctctcgtaatcatttcacgaagaagtt-ctccgccttatcattttcatcgttatcaaacagagaacggatgattatttcataagttacagcatttggaa |
24271626 |
T |
|
| Q |
315 |
tgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatc |
413 |
Q |
| |
|
|||||| |||||||| ||||||||||||||| | || ||||||||||||||||||||| |||||| || ||||||||||| ||||||| | ||| |
|
|
| T |
24271627 |
tgcaacaattgtctttcatttttgacaacaaagtcattgcttcatcaaacaagcccttgttacaaaacccatggatcataacggtatatgtgttgacagt |
24271726 |
T |
|
| Q |
414 |
tagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||||| || || | ||||||||| ||||||| || ||||| |||| ||||||||||||||| |
|
|
| T |
24271727 |
tatattatagcctttgaccaaaagatcctcaaaaatattccgtgcatcctctagtcttccacctttgcacaatccatcaataagaatagtgtat |
24271820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 440
Target Start/End: Complemental strand, 29930504 - 29930276
Alignment:
| Q |
215 |
cctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaa |
314 |
Q |
| |
|
|||||| | |||||||||||||||| |||||||||||| ||||||||||||| ||| || || ||| | |||| || ||||||||||||||||||||||| |
|
|
| T |
29930504 |
cctctcacgatcatttcacgaagaaatttctctgccatatcattttcatcttcttcaaatagtgaagggataattatttcataagttttagcatttggaa |
29930405 |
T |
|
| Q |
315 |
tgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatc |
413 |
Q |
| |
|
|||| |||||||| ||||||||||| | ||||| |||| |||| | ||||||||| ||| |||||| |||||||||||||| |||||||||| |||| |
|
|
| T |
29930404 |
tgcagccattgtcgtccatttttgatagcaaggtcaacgcttcgttgaacaagcccatgtcacaaaacccttggatcataacggtatatgtatagacatt |
29930305 |
T |
|
| Q |
414 |
tagat--tatagcctttgaccaaaagatc |
440 |
Q |
| |
|
||||| |||||||||||||||||||||| |
|
|
| T |
29930304 |
tagattatatagcctttgaccaaaagatc |
29930276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 24889607 - 24889714
Alignment:
| Q |
13 |
tcaattaggtagtttaatatacatagtatctataaaggtttcggtatacacatttaacaaatgaaacagcaataataaagtcttctgcctgttaggtgag |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24889607 |
tcaattaggtagtttaatatacatagtatctataaaggtttcggtaaacacatttaacaaatgaaacagcaataataaagtcttctgcctgttaggtgag |
24889706 |
T |
|
| Q |
113 |
ggacgtac |
120 |
Q |
| |
|
||| |||| |
|
|
| T |
24889707 |
ggaggtac |
24889714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 189 - 489
Target Start/End: Original strand, 29365958 - 29366259
Alignment:
| Q |
189 |
ttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataac |
288 |
Q |
| |
|
||||||||||||| ||| | ||| ||||||| |||||||||||||||||||||||| ||| | |||||||||||||| || || | ||||| || | |
|
|
| T |
29365958 |
ttacctagtttcagtcttaaaataggcctctcgtaatcatttcacgaagaagtttctccgccttatcattttcatctttatcaaacaaagaacagatgat |
29366057 |
T |
|
| Q |
289 |
tagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaacc-ttgg |
387 |
Q |
| |
|
|| ||||||||| || ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||| | | |||||||| ||| |
|
|
| T |
29366058 |
tatttcataagtaacggcgtttggaatgcaaccattttcttccatttttgacaacaaatccaatgattcatcaaacaagccatggctacaaaacccttga |
29366157 |
T |
|
| Q |
388 |
atcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtc |
487 |
Q |
| |
|
|||||| || ||||| ||| ||||||||| | |||||||||||||||||||||||||||||| | || | |||||||||||||||| ||| ||| |||| |
|
|
| T |
29366158 |
atcatagcagtatatatattgacatctagaatgtagcctttgaccaaaagatcttcaaaaactatccgtgcatcctctagccttccatttttgcatagtc |
29366257 |
T |
|
| Q |
488 |
ca |
489 |
Q |
| |
|
|| |
|
|
| T |
29366258 |
ca |
29366259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 187 - 507
Target Start/End: Complemental strand, 29895014 - 29894696
Alignment:
| Q |
187 |
tcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaata |
286 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||||| ||||||||||||||| |||||| ||| | |||||||||||||| || || || ||||| || |
|
|
| T |
29895014 |
tcttacctagtttcagtcttacaataggcctctcgtaatcatttcacgaag---tttctccgccttatcattttcatctttatcaaacagggaacggatg |
29894918 |
T |
|
| Q |
287 |
actagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cctt |
385 |
Q |
| |
|
| || |||||||||| ||||| ||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||||||||||| |||||| || | |
|
|
| T |
29894917 |
attatttcataagttacagcatctggaatgcaactattgtctttcatttttgacaacaaagtcaatgcttcatcaaacaagcccttgttacaaaacccat |
29894818 |
T |
|
| Q |
386 |
ggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacag |
485 |
Q |
| |
|
|||||||||| ||||||| | ||| || |||||||||||||||||||||||| ||||||| || | | ||| ||||| ||||||| || ||||| |
|
|
| T |
29894817 |
ggatcataacggtatatgtgttgacagttatattatagcctttgaccaaaagatcctcaaaaatattatgtgcatcttctagtcttccacctttacacag |
29894718 |
T |
|
| Q |
486 |
tccactgataagaatagtgtat |
507 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
29894717 |
tccatcaataagaatagtgtat |
29894696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 187 - 507
Target Start/End: Original strand, 24263287 - 24263608
Alignment:
| Q |
187 |
tcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaata |
286 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||| | |||||||||||||||||||||||| ||| | |||||||||||||| || || ||||||| || |
|
|
| T |
24263287 |
tcttacctagtttcagtcttacaatagacctcttgtaatcatttcacgaagaagtttctccgccttatcattttcatctttatcaaacagagaacagatg |
24263386 |
T |
|
| Q |
287 |
actagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cctt |
385 |
Q |
| |
|
| || ||||||||| | || | ||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||| | | |||||| |||| |
|
|
| T |
24263387 |
attatttcataagtaatggcgtctggaatgcaactattgtctttcatttttgacaacaaagacaatgcttcatcaaacaagccatggctacaaaaccctt |
24263486 |
T |
|
| Q |
386 |
ggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacag |
485 |
Q |
| |
|
| ||||||||| ||||||| | || ||||||||||||||||||||||||||| ||||||| || || | ||||||||| ||||||| || |||| |
|
|
| T |
24263487 |
gaatcataacagtatatgtgttgacggttagattatagcctttgaccaaaagatcctcaaaaatattccgtgcatcctctagtcttccacctttacacaa |
24263586 |
T |
|
| Q |
486 |
tccactgataagaatagtgtat |
507 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
24263587 |
tccatcaataagaatagtgtat |
24263608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 30999354 - 30999459
Alignment:
| Q |
8 |
catcatcaattaggtagtttaatatacatagtatctataaaggtttcggtatacacatttaacaaatgaaacagcaataataaagtcttctgcctgttag |
107 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
30999354 |
catcttcaattaggtagtttaatataaatagtatctataaaggtttcggtatacacatttaacacatgaaacagcaataataaagtcttctgcctgttag |
30999453 |
T |
|
| Q |
108 |
gtgagg |
113 |
Q |
| |
|
|||||| |
|
|
| T |
30999454 |
gtgagg |
30999459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 230 - 383
Target Start/End: Original strand, 29210971 - 29211124
Alignment:
| Q |
230 |
tcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccattgtctt |
329 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||| |||||| ||| |||||| | ||| || ||||||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
29210971 |
tcacgatgaagtttctctgccatatcattttcaccttttttgaacagagaaagcttaattaattcataagttttagcatctggaatgcatccattctctt |
29211070 |
T |
|
| Q |
330 |
ccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaacc |
383 |
Q |
| |
|
|||||||||||| ||||||| | ||||||||||||||||||| | |||||||| |
|
|
| T |
29211071 |
ccatttttgacagcaaggccgatgcttcatcaaacaagcccttcttacaaaacc |
29211124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 205 - 448
Target Start/End: Original strand, 15726742 - 15726986
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||| ||| ||||| |||||||||||||| ||||||| ||||||| | ||||| ||||| |||| ||||||| ||| ||| | ||||||||||| | |
|
|
| T |
15726742 |
ttacaatagacctctagcaatcatttcacgtagaagttgctctgccttatcattctcatcatttttaaagagagcacggttaattggttcataagttaca |
15726841 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaa-accttggatcataacactatatg |
403 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| || || | |||||||||| |||||||| |||||| ||| | |||||||| |||||||| |
|
|
| T |
15726842 |
gcatctggaatgcaaccattgtcttccatttttgacagcagggtcgtagcttcatcaaataagccctttgaacaaagaccattgatcataatactatatg |
15726941 |
T |
|
| Q |
404 |
tatatacatctagattatagcctttgaccaaaagatcttcaaaaa |
448 |
Q |
| |
|
| | |||| || |||||||||||| | ||||||||||| ||||| |
|
|
| T |
15726942 |
tgcaaacatttaaattatagcctttaatcaaaagatcttgaaaaa |
15726986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 189 - 474
Target Start/End: Complemental strand, 29898535 - 29898249
Alignment:
| Q |
189 |
ttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataac |
288 |
Q |
| |
|
||||||||||||| ||| | ||| |||||| |||||||||||||||||||||||| ||| | |||||||||||||| || || ||||||| || | |
|
|
| T |
29898535 |
ttacctagtttcagtcttataataggcctctcataatcatttcacgaagaagtttctccgccttatcattttcatctttatcaaacagagaacagatgat |
29898436 |
T |
|
| Q |
289 |
tagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttgg |
387 |
Q |
| |
|
|| ||||||||| | || ||||||||||||||||| ||||||||||||| || ||| ||||| ||||||||||||||| | | |||||| ||||| |
|
|
| T |
29898435 |
tatttcataagtaatggcgtttggaatgcaaccattttcttccatttttggcagcaaagccaatgattcatcaaacaagccatagctacaaaacccttga |
29898336 |
T |
|
| Q |
388 |
atcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttcca |
474 |
Q |
| |
|
|||||||| |||| || | ||| || |||||||||||||||||||||||| ||||||| || || | ||||||||| |||||| |
|
|
| T |
29898335 |
atcataacggtataggtgttgacagttatattatagcctttgaccaaaagatcctcaaaaatattccgtgcatcctctagtcttcca |
29898249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 275 - 507
Target Start/End: Complemental strand, 29835591 - 29835358
Alignment:
| Q |
275 |
agagaacgaataactagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgt |
374 |
Q |
| |
|
|||||||| || | || |||||||||| |||||||||| ||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
29835591 |
agagaacggatgattatttcataagttaaggcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaaacaagcccttgt |
29835492 |
T |
|
| Q |
375 |
aacaaaa-ccttggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttcc |
473 |
Q |
| |
|
|||||| || ||||||||||| ||||||| | ||| || |||||||||||||||||||||||| ||||||| || | | ||| ||||| ||||| |
|
|
| T |
29835491 |
tacaaaacccatggatcataacggtatatgtgttgacagttatattatagcctttgaccaaaagatcctcaaaaatattatgtgcatcatctagtcttcc |
29835392 |
T |
|
| Q |
474 |
actttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
|| || ||||||||| ||||||||||||||| |
|
|
| T |
29835391 |
acctttacacagtccatcaataagaatagtgtat |
29835358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 507
Target Start/End: Original strand, 30126594 - 30126911
Alignment:
| Q |
191 |
acctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataacta |
290 |
Q |
| |
|
|||||||||||| ||| ||||| |||| | |||||||||||||| || |||||| ||| | |||||||||||||| || || |||||||| || | || |
|
|
| T |
30126594 |
acctagtttcaatcttatagtagatctcttgtaatcatttcacgaataattttctccgccttatcattttcatctttatcaaacagagaacggatgatta |
30126693 |
T |
|
| Q |
291 |
gttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaaca-aaaccttggat |
389 |
Q |
| |
|
|||||||||| | | ||||||||||||| |||||||| ||||| | ||||||| ||||| ||||||||||||||||| ||| ||| || || ||||| |
|
|
| T |
30126694 |
tttcataagttacaacgtttggaatgcaactattgtctttcatttctaacaacaaagccaatgcttcatcaaacaagcccatgttacacaacccatggat |
30126793 |
T |
|
| Q |
390 |
cataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtcca |
489 |
Q |
| |
|
|||| | ||||||| | ||| || |||||||||||||||||||||||| | ||| | ||||| | ||||||||| ||| ||| || |||| |||| |
|
|
| T |
30126794 |
catatcggtatatgtgttgacagttatattatagcctttgaccaaaagatccttaaagatatttcgtgcatcctctagtctttcacctttacacaatcca |
30126893 |
T |
|
| Q |
490 |
ctgataagaatagtgtat |
507 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
30126894 |
tcaataagaatagtgtat |
30126911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 187 - 448
Target Start/End: Complemental strand, 29929737 - 29929475
Alignment:
| Q |
187 |
tcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaata |
286 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||| | ||||||| |||||| || || ||||||| || |
|
|
| T |
29929737 |
tcttacctagtttcagtcttacaataggcctctcgtaatcatttcacgaagaagtttctctgccttatcatttttatctttatcaaatagagaacagatg |
29929638 |
T |
|
| Q |
287 |
actagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cctt |
385 |
Q |
| |
|
| || ||||||||| || | ||||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||||| | | |||||| |||| |
|
|
| T |
29929637 |
attatttcataagtaacggcgtctggaatgcaaccattttcttccatttttgacagcaaagccaatgattcatccaacaagccatggctacaaaaccctt |
29929538 |
T |
|
| Q |
386 |
ggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaa |
448 |
Q |
| |
|
| |||||||| ||||||| | ||| || ||||||||| ||||| |||||||| ||||||| |
|
|
| T |
29929537 |
gaatcataacggtatatgtgttgacagttatattatagcccttgactaaaagatcctcaaaaa |
29929475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 15714561 - 15714711
Alignment:
| Q |
221 |
gcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaac |
320 |
Q |
| |
|
|||||||||||||| ||||||||||||||| | ||||| ||||| |||| ||||||| ||| |||| | |||||||||| ||||| ||||||||||| |
|
|
| T |
15714561 |
gcaatcatttcacgcagaagtttctctgccttatcattctcatcatttttaaagagagcacggataattgtttcataagttacagcatctggaatgcaac |
15714660 |
T |
|
| Q |
321 |
cattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccct |
371 |
Q |
| |
|
||||||||||||||||||||| || || || |||||||||| ||||||| |
|
|
| T |
15714661 |
cattgtcttccatttttgacagcagggtcactgcttcatcaaataagccct |
15714711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 187 - 404
Target Start/End: Complemental strand, 29085482 - 29085264
Alignment:
| Q |
187 |
tcttacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaata |
286 |
Q |
| |
|
||||||||| ||||| ||||| ||| ||||||| |||||||||||||| ||||||||| ||| | |||||||||| || || || |||||||| || |
|
|
| T |
29085482 |
tcttacctaatttcagtcttacaatagacctctcgtaatcatttcacgaaaaagtttctccgccttatcattttcattgttatccaacagagaacggatg |
29085383 |
T |
|
| Q |
287 |
actagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-cctt |
385 |
Q |
| |
|
|| |||||||||| || ||||||||||||| | |||||| ||||||||||||||| | ||| ||||||||||||||||||| | |||||| || | |
|
|
| T |
29085382 |
gttatttcataagttacggcgtttggaatgcaactactgtctttcatttttgacaacaaagacaatgcttcatcaaacaagcccttcttacaaaacccat |
29085283 |
T |
|
| Q |
386 |
ggatcataacactatatgt |
404 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
29085282 |
ggatcataacgttatatgt |
29085264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 205 - 507
Target Start/End: Original strand, 30061545 - 30061851
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||| ||| |||||| ||||||||||| |||||||| ||| ||| | ||| |||||| ||| || || | ||||| |||| || ||| | |||| | |
|
|
| T |
30061545 |
ttacactagacctctcacaatcatttcatgaagaagtctcttcgccttatcaatttcatttttatcaaacaaagaacatataattatttcgttagttgca |
30061644 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtct-tc--catttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaacct-tggatcataacactat |
400 |
Q |
| |
|
||||||||| ||||| |||||| || ||||||||| | || ||||| ||||||||||||| || |||| |||||||| ||||||||||| || |
|
|
| T |
30061645 |
gcatttggattgcaattattgtccgtcgtcatttttgatagcatagccaaggcttcatcaaacaaaccattgttacaaaacccatggatcataacggcat |
30061744 |
T |
|
| Q |
401 |
atgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaat |
500 |
Q |
| |
|
||| ||| ||||| ||||| |||||||||||||||| | |||||||||||||||| | ||||||||| ||||||| || |||| ||||| || ||||| |
|
|
| T |
30061745 |
atgcatacacatcaagattgtagcctttgaccaaaataacttcaaaaacttttcgggcatcctctagtcttccacctttacacaatccaccaattagaat |
30061844 |
T |
|
| Q |
501 |
agtgtat |
507 |
Q |
| |
|
||||||| |
|
|
| T |
30061845 |
agtgtat |
30061851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 371
Target Start/End: Complemental strand, 30029794 - 30029628
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||| ||| ||||| ||||||||||||| |||||||||||||||||| || | | ||||| | || |||| || ||||| || ||| |||||| || |
|
|
| T |
30029794 |
ttacaatagacctctagcaatcatttcacaaagaagtttctctgccatatctatcttgccttttccaaatagagcacaaataattatttcgtaagttata |
30029695 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccct |
371 |
Q |
| |
|
|||| ||| ||||||||| |||||||||||||| | ||||| ||| ||||||||||||||||||| |
|
|
| T |
30029694 |
gcatcaggagcgcaaccattctcttccatttttgaaagcaaggtcaatacttcatcaaacaagccct |
30029628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 442
Target Start/End: Original strand, 24258412 - 24258545
Alignment:
| Q |
310 |
tggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaacc-ttggatcataacactatatgtatat |
408 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||| ||||| ||| |||||||| || | | |||||||| ||| ||||||||| ||||||||| |
|
|
| T |
24258412 |
tggaatgcaaccatttacttccatttttgacagcaaagccaatgattcgtcaaacaatccatggctacaaaacccttgaatcataacagtatatgtattg |
24258511 |
T |
|
| Q |
409 |
acatctagattatagcctttgaccaaaagatctt |
442 |
Q |
| |
|
||||||||| | |||||||||||||||||||||| |
|
|
| T |
24258512 |
acatctagaatgtagcctttgaccaaaagatctt |
24258545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 507
Target Start/End: Complemental strand, 29890106 - 29889873
Alignment:
| Q |
275 |
agagaacgaataactagttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgt |
374 |
Q |
| |
|
|||||||| || | || |||||||||| || |||| |||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||| | | |
|
|
| T |
29890106 |
agagaacggatgattatttcataagttacggcgtttgaaatgcaaccattttcttccatttttgacagcaaagccaatgattcatcaaacaagccatggc |
29890007 |
T |
|
| Q |
375 |
aacaaaa-ccttggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttcc |
473 |
Q |
| |
|
|||||| ||||| |||||||| ||||||| | ||| || ||||||||| ||||| |||||||| ||||||| || || | ||||| ||| ||||| |
|
|
| T |
29890006 |
tacaaaacccttgaatcataacggtatatgtgttaacagttacattatagcccttgactaaaagatcctcaaaaatattccgtgcatcctttagtcttcc |
29889907 |
T |
|
| Q |
474 |
actttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
|| || ||||| |||| ||||||||||||||| |
|
|
| T |
29889906 |
acctttgcacaatccatcaataagaatagtgtat |
29889873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 474
Target Start/End: Complemental strand, 29946757 - 29946613
Alignment:
| Q |
331 |
catttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaacct-tggatcataacactatatgtatatacatctagattatagcctttg |
429 |
Q |
| |
|
||||||||||| ||||| || ||||| |||||||||||||| |||||||| |||||||||| ||||||||||| |||| ||| | |||||||| |
|
|
| T |
29946757 |
catttttgacagcaaggtgaatgcttcaccaaacaagcccttgctacaaaacccatggatcataatggtatatgtatatgcatcaagactgcagcctttg |
29946658 |
T |
|
| Q |
430 |
accaaaagatcttcaaaaacttttcgcgtatcctctagccttcca |
474 |
Q |
| |
|
|||||||||| ||||||||| || || | ||||| |||||||||| |
|
|
| T |
29946657 |
accaaaagatattcaaaaaccttccgtgcatcctttagccttcca |
29946613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 24942510 - 24942453
Alignment:
| Q |
315 |
tgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccctt |
372 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
24942510 |
tgcaaccattgtcttccatttttgacactaaggacaatgcttcatcaaacaagccctt |
24942453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 371
Target Start/End: Complemental strand, 24935103 - 24934947
Alignment:
| Q |
215 |
cctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaa |
314 |
Q |
| |
|
||||| |||||||||||||| ||||||||| | ||| | ||||| | ||| || ||||| | || ||| | || |||||||||| ||||| || | |
|
|
| T |
24935103 |
cctctagcaatcatttcacgtagaagtttcaccgccttatcattcttatcgttctcgaacaaagcacggacaagagtttcataagttacagcatcaggta |
24935004 |
T |
|
| Q |
315 |
tgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccct |
371 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| || |||||||||||||||||| |
|
|
| T |
24935003 |
tgcaaccgttgtcttccatttttgacactaaggacagtgcttcatcaaacaagccct |
24934947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 29949541 - 29949586
Alignment:
| Q |
296 |
taagttttagcatttggaatgcaaccattgtcttccatttttgaca |
341 |
Q |
| |
|
|||||| | |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
29949541 |
taagttatcgcatttggggtgcaaccattgtcttccatttttgaca |
29949586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 22770 - 22486
Alignment:
| Q |
224 |
atcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaaccat |
323 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||| || ||||||||||||||||| ||||||||| |||| |
|
|
| T |
22770 |
atcatttcacgaagaagtttctctgccatatcattttcatctttttcgaacagagaaaggataattatttcataagttttagcatctggaatgcatccat |
22671 |
T |
|
| Q |
324 |
tgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattata |
422 |
Q |
| |
|
| |||||||||||||||| |||||||||| |||| |||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||| || || || |
|
|
| T |
22670 |
tctcttccatttttgacagcaaggccaacgcttcgtcaaacaagcccttgtcacaaaacccttggatcataacggtatatgcatagacatcaaggttgta |
22571 |
T |
|
| Q |
423 |
gcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | |||||| | ||||||||||||||| ||| ||| |||||| |||||| |
|
|
| T |
22570 |
gcctttgaccagaagatcttcaaaaacttttcgtgcatcctccaattttccactttggcacaatcccttgacaagaatggtgtat |
22486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 205 - 505
Target Start/End: Original strand, 53192 - 53486
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||| ||| |||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||| ||||| | |||| || ||||||||||||| |
|
|
| T |
53192 |
ttacaatagacctcacgcgatcatttcacaaagaagtttctctgccatatcattttcatctttttcgaacagagacaggataattatttcataagtttta |
53291 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatg |
403 |
Q |
| |
|
|||||||||||||| ||||| | ||||||| |||||| ||| ||||||||||||||||||||| ||||| |||||| |||||||||||||| | |||| |
|
|
| T |
53292 |
gcatttggaatgcatccattcttttccattattgacagcaatgccaacacttcatcaaacaagttcttgtcacaaaacccttggatcataacggtttatg |
53391 |
T |
|
| Q |
404 |
tatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtccactgataagaatagt |
503 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||||||||||||| | | ||||||| |||||||||| |||||||| ||||||||||||| |
|
|
| T |
53392 |
tatagacatttagat-------tttgaccaaaagatcttcaaaaacttttcgtgcagcctctagttttccactttgacacagtcccttgataagaatagt |
53484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 111; Significance: 8e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 209 - 474
Target Start/End: Original strand, 15062433 - 15062699
Alignment:
| Q |
209 |
agtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcat |
308 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||| || ||| |||||| |||||| |
|
|
| T |
15062433 |
agtagacctctcgctatcatttcacgaagaagtttctctgctttatcattttcatctttttcaaagagagaatgaataagtatttcgtaagttatagcat |
15062532 |
T |
|
| Q |
309 |
ttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaa-ccttggatcataacactatatgtata |
407 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||| || |||||| |||||||||| |||||||||| |||||| || | ||||| | | |||||||||| |
|
|
| T |
15062533 |
taggaatgcaaccattgtctttcatttttgacagcatggccaatccttcatcaaagaagcccttgttacaaaatccattgatcaaagaagtatatgtata |
15062632 |
T |
|
| Q |
408 |
tacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttcca |
474 |
Q |
| |
|
| || | || | ||||||||||||||||||||||||||||| ||| | | ||| ||||| |||||| |
|
|
| T |
15062633 |
gatatttggactgtagcctttgaccaaaagatcttcaaaaaccttttgtgcatcgtctagtcttcca |
15062699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0573 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0573
Description:
Target: scaffold0573; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 190 - 507
Target Start/End: Complemental strand, 4598 - 4280
Alignment:
| Q |
190 |
tacctagtttcaaatttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataact |
289 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| || || |||||||| || | | |
|
|
| T |
4598 |
tacctagtttcaatcttacaatagccctctcgtaatcatttcaagaagaagtttctccgccttatcattttcatctttatcaaacagagaacggatgatt |
4499 |
T |
|
| Q |
290 |
agttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaaac-cttgga |
388 |
Q |
| |
|
| ||||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||| ||| |||| ||||||| | |||| |
|
|
| T |
4498 |
atttcataagtaacggcgtttggaatgcaaccattttcttccatttttgacaacatagccaatgcttcaccaaacatgccgttgttacaaaacacatgga |
4399 |
T |
|
| Q |
389 |
tcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcctctagccttccactttggcacagtcc |
488 |
Q |
| |
|
||||||| ||||||| | ||||| || |||||| ||||||||||||||||| ||||||| ||| | | |||||| | ||||||| || |||||||| |
|
|
| T |
4398 |
tcataacggtatatgtgtttacatttatattataacctttgaccaaaagatcctcaaaaatattttgtgcatcctccggtcttccacctttacacagtcc |
4299 |
T |
|
| Q |
489 |
actgataagaatagtgtat |
507 |
Q |
| |
|
| | ||||||||||||||| |
|
|
| T |
4298 |
attaataagaatagtgtat |
4280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 98; Significance: 5e-48; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 205 - 449
Target Start/End: Complemental strand, 10130583 - 10130338
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||| ||| |||||| |||||| |||||||||||||| || ||||| |||||||||||||||| ||| | |||| |||||| || ||||||||||||| |
|
|
| T |
10130583 |
ttacaataggcctctcctaatcatctcacgaagaagtttttccgccatatcattttcatcttttttgaacaaagaaagaataattatttcataagtttta |
10130484 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaaca-aaaccttggatcataacactatatg |
403 |
Q |
| |
|
|||||||| ||||| |||||||||| ||||||||||| ||| |||| |||||||||| ||||||| |||||| || ||| |||||||| || |||||| |
|
|
| T |
10130483 |
gcatttggcatgcacccattgtctttcatttttgacagcaaagccagtgcttcatcaaataagccctcgtaacagaatcctcggatcatagcagtatatg |
10130384 |
T |
|
| Q |
404 |
tatatacatctagattatagcctttgaccaaaagatcttcaaaaac |
449 |
Q |
| |
|
|||| ||||||||||| |||||||| | | |||||||| |||||| |
|
|
| T |
10130383 |
tatagacatctagattgtagccttttattagaagatcttgaaaaac |
10130338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 215 - 366
Target Start/End: Complemental strand, 19490686 - 19490535
Alignment:
| Q |
215 |
cctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaa |
314 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||| | ||||| || ||||| | ||||||| |||||||| || |||||||||| |||||| |||| |
|
|
| T |
19490686 |
cctctggcaatcatttcacgaagaagtttttcagccttatcattcacaccttttccaaagagagcacgaataattatttcataagttatagcatcaggaa |
19490587 |
T |
|
| Q |
315 |
tgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaa |
366 |
Q |
| |
|
|||| || ||| ||||||||||||||| ||||| ||| ||||||| ||||| |
|
|
| T |
19490586 |
tgcagcctttggcttccatttttgacagcaaggtcaatgcttcatccaacaa |
19490535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 449
Target Start/End: Complemental strand, 17251743 - 17251514
Alignment:
| Q |
221 |
gcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaac |
320 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||| |||||||| |||| || | ||||| | |||||||| | |||||| |||| || | |
|
|
| T |
17251743 |
gcaatcatttcacgaagaagtttctcagccttgtcattcatgtctttttcaaagaaagcattaataattgtttcataagctatagcatcaggaacacagc |
17251644 |
T |
|
| Q |
321 |
cattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcccttgtaacaaa-accttggatcataacactatatgtatatacatctagatt |
419 |
Q |
| |
|
| ||||||||||||||||||| ||||| ||| ||||||||||||||| || | ||||| || | |||||||| ||||||||| ||||||| ||| |
|
|
| T |
17251643 |
ctttgtcttccatttttgacagcaaggtcaatgcttcatcaaacaagctctctttacaaagcccattgatcataatactatatgttacaacatctacatt |
17251544 |
T |
|
| Q |
420 |
atagcctttgaccaaaagatcttcaaaaac |
449 |
Q |
| |
|
|| |||||| | ||||||||| | |||||| |
|
|
| T |
17251543 |
atggcctttcatcaaaagatcctgaaaaac |
17251514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 371
Target Start/End: Complemental strand, 9437 - 9275
Alignment:
| Q |
209 |
agtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcat |
308 |
Q |
| |
|
||||| ||||| |||||||||||||| ||||||||||||||| | || || ||||| |||| ||||||| | | || || ||| ||||| ||||| |
|
|
| T |
9437 |
agtagacctctagcaatcatttcacgtagaagtttctctgccttttcgttctcatcatttttaaagagagcgtggacaattatttcgaaagttacagcat |
9338 |
T |
|
| Q |
309 |
ttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccct |
371 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||| |
|
|
| T |
9337 |
taggaatgcaaccattgtcttccatttttgacaacagagccaaagcttcatcaagcaagccct |
9275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 205 - 341
Target Start/End: Complemental strand, 279 - 143
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||||||| ||||| |||||||||||||| || |||||||||||| | || || | ||| ||||| ||||||| ||||||| | |||| ||||| | |
|
|
| T |
279 |
ttacagtagacctctggcaatcatttcacgtagtagtttctctgccctttcgttcttatcattttcaaagagagtgcgaataattgtttcacaagttaca |
180 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgaca |
341 |
Q |
| |
|
|||| |||| || |||||||||||||||||||||| |
|
|
| T |
179 |
gcatcaggaacacatccattgtcttccatttttgaca |
143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0652 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0652
Description:
Target: scaffold0652; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 221 - 337
Target Start/End: Original strand, 864 - 980
Alignment:
| Q |
221 |
gcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaatgcaac |
320 |
Q |
| |
|
|||||||||||||| ||||||||||||||| | ||||| ||||| |||| ||||||| | | |||| | | |||||||| ||||||||||||||||| |
|
|
| T |
864 |
gcaatcatttcacgtagaagtttctctgccttatcattctcatcatttttaaagagagcatggataattgttgcataagttacagcatttggaatgcaac |
963 |
T |
|
| Q |
321 |
cattgtcttccattttt |
337 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
964 |
cattgtcttccattttt |
980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 365 - 507
Target Start/End: Original strand, 24218948 - 24219091
Alignment:
| Q |
365 |
aagcccttgtaacaaaa-ccttggatcataacactatatgtatatacatctagattatagcctttgaccaaaagatcttcaaaaacttttcgcgtatcct |
463 |
Q |
| |
|
|||||||| | |||||| |||| ||||||| | |||||||||| ||||| | ||| ||||| |||||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
24218948 |
aagcccttcttacaaaatcctttgatcatagtattatatgtatacacatcaatattgtagccattgaccaaaacatcttcaaaaactttttgcgcatcct |
24219047 |
T |
|
| Q |
464 |
ctagccttccactttggcacagtccactgataagaatagtgtat |
507 |
Q |
| |
|
||| |||||||||| ||| | |||| ||||||||||| ||||| |
|
|
| T |
24219048 |
ttagtcttccacttttgcataatccattgataagaatattgtat |
24219091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 371
Target Start/End: Complemental strand, 11991748 - 11991592
Alignment:
| Q |
215 |
cctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcatttggaa |
314 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||| | ||||| |||||||| | ||||||| | || | |||||||||| ||||| |||| |
|
|
| T |
11991748 |
cctctagcaatcatttcacgcagaagtttctccgccttttcattctcatctttatgaaagagagcctggatgagagtttcataagttacagcatcaggaa |
11991649 |
T |
|
| Q |
315 |
tgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccct |
371 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11991648 |
tgataccattgtcatccatttttgacaacaaggcctctgcttcatcaaacaagccct |
11991592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 369
Target Start/End: Original strand, 24208740 - 24208897
Alignment:
| Q |
209 |
agtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagttttagcat |
308 |
Q |
| |
|
||||| ||||| |||||||||||||||| ||||| |||| | |||| |||| |||| || || | |||| | |||| || |||| |||||||||||| |
|
|
| T |
24208740 |
agtagacctcttacaatcatttcacgaag---tttctttgccttatcatattcacctttatcaaacaaagaatggataattatttcaaaagttttagcat |
24208836 |
T |
|
| Q |
309 |
ttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcc |
369 |
Q |
| |
|
||||||||||||| || ||| ||||||||| | || |||||| | ||||||||||||| |
|
|
| T |
24208837 |
ctggaatgcaaccactggctttcatttttgataccatggccaatgcaccatcaaacaagcc |
24208897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 16351409 - 16351332
Alignment:
| Q |
292 |
ttcataagttttagcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagcc |
369 |
Q |
| |
|
|||||||||| ||||| |||||| ||||||||| |||||||||||||||||| || |||||||||||||||| |
|
|
| T |
16351409 |
ttcataagttacagcatcaggaatgataccattgtcctccatttttgacaacaagacctctgcttcatcaaacaagcc |
16351332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 33998280 - 33998219
Alignment:
| Q |
311 |
ggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccctt |
372 |
Q |
| |
|
||||||||| |||||||||||||| |||| |||||||| | ||||||||||||| ||||| |
|
|
| T |
33998280 |
ggaatgcaagcattgtcttccattcttgataacaaggcaagtgcttcatcaaacaaaccctt |
33998219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 205 - 341
Target Start/End: Complemental strand, 3679 - 3543
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||||||| ||||| |||||||||||||| || |||||||||||| | || || | ||| ||||| ||||||| ||||||| | |||| ||||| | |
|
|
| T |
3679 |
ttacagtagacctctggcaatcatttcacgtagtagtttctctgccctttcgttcttatcattttcaaagagagcgcgaataattgtttcacaagttaca |
3580 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgaca |
341 |
Q |
| |
|
|||| |||| || |||||||||||||||||||||| |
|
|
| T |
3579 |
gcatcaggaacacatccattgtcttccatttttgaca |
3543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 205 - 341
Target Start/End: Complemental strand, 6642 - 6506
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||||||| ||||| |||||||||||||| || |||||||||||| | || || | ||| ||||| ||||||| ||||||| | |||| ||||| | |
|
|
| T |
6642 |
ttacagtagacctctagcaatcatttcacgtagtagtttctctgccctttcgttcttatcattttcaaagagagcgcgaataattgtttcacaagttaca |
6543 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgaca |
341 |
Q |
| |
|
|||| |||| || |||||||||||||||||||||| |
|
|
| T |
6542 |
gcatcaggaacacatccattgtcttccatttttgaca |
6506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 205 - 341
Target Start/End: Original strand, 42871 - 43007
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtttta |
304 |
Q |
| |
|
||||||||| ||||| ||||||||||||| || |||||||||||| | || || | ||| ||||| ||||||| |||||||| | |||| ||||| | |
|
|
| T |
42871 |
ttacagtagacctctaacaatcatttcacgtagtagtttctctgccctttcgttcttatcattttcaaagagagcacgaataattgtttcacaagttaca |
42970 |
T |
|
| Q |
305 |
gcatttggaatgcaaccattgtcttccatttttgaca |
341 |
Q |
| |
|
|||| |||| || |||||||||||||||||||||| |
|
|
| T |
42971 |
gcatcaggaacacatccattgtcttccatttttgaca |
43007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 363
Target Start/End: Original strand, 47460 - 47614
Alignment:
| Q |
209 |
agtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagtt-cataagttttagca |
307 |
Q |
| |
|
||||| ||||| |||||||||| |||||||||||||||||| | ||||| ||||| | ||||||| || |||| ||||| |||||||| |||| |
|
|
| T |
47460 |
agtagacctctagcaatcattttccgaagaagtttctctgccttttcattcaagtctttatgaaagagagcccggataa-tagtttcataagttacagca |
47558 |
T |
|
| Q |
308 |
tttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaa |
363 |
Q |
| |
|
|| |||| ||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
47559 |
ttaggaagtataccattgtcctccatttttgacaacaaggcctccacttcatcaaa |
47614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 205 - 371
Target Start/End: Complemental strand, 137820 - 137654
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactag-ttcataagtttt |
303 |
Q |
| |
|
||||| ||| ||||| |||| ||||||||||||||||||||| ||| | ||||| | |||||| | |||||||| || |||| ||| |||||||||| |
|
|
| T |
137820 |
ttacaatagacctctagcaaccatttcacgaagaagtttctccgccttttcattgtaatctttataaaagagagagcggataa-tagtttcataagttac |
137722 |
T |
|
| Q |
304 |
agcatttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccct |
371 |
Q |
| |
|
| |||| ||| || | |||| || ||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
137721 |
aacattaggattgatatcattatcctccatttttgacaacaaggcctctgctttatcaaacaagccct |
137654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 371
Target Start/End: Complemental strand, 140702 - 140540
Alignment:
| Q |
209 |
agtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagtt-cataagttttagca |
307 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||| ||| ||||| |||||||| | ||||||| || || | ||||| |||||||| |||| |
|
|
| T |
140702 |
agtagacctctagcaatcatttcacgaagaagtttctccgcctgttcattctcatctttatgaaagagagcccggatga-tagttacataagttacagca |
140604 |
T |
|
| Q |
308 |
tttggaatgcaaccattgtcttccatttttgacaacaaggccaacacttcatcaaacaagccct |
371 |
Q |
| |
|
| |||||| ||||||||| |||||||| |||| |||||| |||||||||||||| |||| |
|
|
| T |
140603 |
tcaggaatgataccattgtcatccattttagacatcaaggcatctacttcatcaaacaacccct |
140540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 123922 - 123960
Alignment:
| Q |
306 |
catttggaatgcaaccattgtcttccatttttgacaaca |
344 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
123922 |
cattaggaatgcaaccattgtcttccatttttgacaaca |
123960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 125680 - 125738
Alignment:
| Q |
209 |
agtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatcttt |
267 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||| ||| | ||||| |||||||| |
|
|
| T |
125680 |
agtagacctctagcaatcatttcacgaagaagtttctccgccttttcattctcatcttt |
125738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 337
Target Start/End: Original strand, 789 - 905
Alignment:
| Q |
221 |
gcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactag-ttcataagttttagcatttggaatgcaa |
319 |
Q |
| |
|
|||||||||||||| ||||||||||||||| | ||||| ||||| |||| || |||| ||||||| ||| |||||| ||| | ||| ||||||||| |
|
|
| T |
789 |
gcaatcatttcacgtagaagtttctctgccctatcattctcatcatttttaaaaagagcgcgaataa-tagtttcatacgttacaacatcaggaatgcaa |
887 |
T |
|
| Q |
320 |
ccattgtcttccattttt |
337 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
888 |
ccattttcttccattttt |
905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 33497866 - 33497958
Alignment:
| Q |
209 |
agtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttcgaagagagaacgaataactagttcataagtt |
301 |
Q |
| |
|
||||| ||||| |||||||||| |||||||||||||||| | | ||||| |||||||| | |||||||| || ||||| | |||||||||| |
|
|
| T |
33497866 |
agtagacctctagcaatcattttgcgaagaagtttctctgtcttctcattctcatctttatgaaagagagaccggataacaatttcataagtt |
33497958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0086
Description:
Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 341
Target Start/End: Original strand, 30976 - 31006
Alignment:
| Q |
311 |
ggaatgcaaccattgtcttccatttttgaca |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
30976 |
ggaatgcaaccattgtcttccatttttgaca |
31006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0086; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 30871 - 30936
Alignment:
| Q |
205 |
ttacagtagccctctcgcaatcatttcacgaagaagtttctctgccatgtcattttcatctttttc |
270 |
Q |
| |
|
||||| ||| ||||| ||||||||||||||||||||||||| ||| | ||||| ||||| ||||| |
|
|
| T |
30871 |
ttacaatagacctctaacaatcatttcacgaagaagtttctccgccttttcattctcatccttttc |
30936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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